-- dump date 20140620_064534 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001471742.1 157373142 5612828 complement(521..1882) 1 NC_009831.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1882 trmE 5612828 trmE Shewanella sediminis HAW-EB3 tRNA modification GTPase TrmE YP_001471742.1 521 R 425104 CDS YP_001471743.1 157373143 5610173 complement(1997..3631) 1 NC_009831.1 KEGG: slo:Shew_3866 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 3631 5610173 Ssed_0002 Shewanella sediminis HAW-EB3 60 kDa inner membrane insertion protein YP_001471743.1 1997 R 425104 CDS YP_001471744.1 157373144 5613984 complement(3635..3892) 1 NC_009831.1 KEGG: slo:Shew_3867 protein of unknown function DUF37; hypothetical protein 3892 5613984 Ssed_0003 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471744.1 3635 R 425104 CDS YP_001471745.1 157373145 5613985 complement(3859..4221) 1 NC_009831.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 4221 rnpA 5613985 rnpA Shewanella sediminis HAW-EB3 ribonuclease P YP_001471745.1 3859 R 425104 CDS YP_001471746.1 157373146 5610243 complement(4230..4367) 1 NC_009831.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4367 rpmH 5610243 rpmH Shewanella sediminis HAW-EB3 50S ribosomal protein L34 YP_001471746.1 4230 R 425104 CDS YP_001471747.1 157373147 5610244 4812..6200 1 NC_009831.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 6200 dnaA 5610244 dnaA Shewanella sediminis HAW-EB3 chromosomal replication initiation protein YP_001471747.1 4812 D 425104 CDS YP_001471748.1 157373148 5610245 6220..7320 1 NC_009831.1 KEGG: slo:Shew_0002 DNA polymerase III, beta subunit; DNA-directed DNA polymerase 7320 5610245 Ssed_0007 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001471748.1 6220 D 425104 CDS YP_001471749.1 157373149 5610246 7614..8696 1 NC_009831.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 8696 recF 5610246 recF Shewanella sediminis HAW-EB3 recombination protein F YP_001471749.1 7614 D 425104 CDS YP_001471750.1 157373150 5609752 8689..11130 1 NC_009831.1 KEGG: slo:Shew_0004 DNA gyrase, B subunit; DNA topoisomerase 11130 5609752 Ssed_0009 Shewanella sediminis HAW-EB3 DNA topoisomerase YP_001471750.1 8689 D 425104 CDS YP_001471751.1 157373151 5609753 complement(11580..12326) 1 NC_009831.1 KEGG: slo:Shew_0006 LamB/YcsF family protein; LamB/YcsF family protein 12326 5609753 Ssed_0010 Shewanella sediminis HAW-EB3 LamB/YcsF family protein YP_001471751.1 11580 R 425104 CDS YP_001471752.1 157373152 5609754 complement(12470..13456) 1 NC_009831.1 KEGG: slo:Shew_0007 UreA amidolyase related protein; urea amidolyase 13456 5609754 Ssed_0011 Shewanella sediminis HAW-EB3 urea amidolyase YP_001471752.1 12470 R 425104 CDS YP_001471753.1 157373153 5609755 complement(13485..14171) 1 NC_009831.1 KEGG: bte:BTH_I0230 conserved hypothetical protein TIGR00370; hypothetical protein 14171 5609755 Ssed_0012 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471753.1 13485 R 425104 CDS YP_001471754.1 157373154 5609756 14650..15705 1 NC_009831.1 KEGG: sbl:Sbal_0011 signal transduction protein; signal transduction protein 15705 5609756 Ssed_0013 Shewanella sediminis HAW-EB3 signal transduction protein YP_001471754.1 14650 D 425104 CDS YP_001471755.1 157373155 5609687 complement(15774..17843) 1 NC_009831.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 17843 glyS 5609687 glyS Shewanella sediminis HAW-EB3 glycyl-tRNA synthetase subunit beta YP_001471755.1 15774 R 425104 CDS YP_001471756.1 157373156 5609688 complement(17855..18718) 1 NC_009831.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 18718 glyQ 5609688 glyQ Shewanella sediminis HAW-EB3 glycyl-tRNA synthetase subunit alpha YP_001471756.1 17855 R 425104 CDS YP_001471757.1 157373157 5609689 18917..19507 1 NC_009831.1 KEGG: slo:Shew_0011 DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 19507 5609689 Ssed_0016 Shewanella sediminis HAW-EB3 DNA-3-methyladenine glycosylase I YP_001471757.1 18917 D 425104 CDS YP_001471758.1 157373158 5609690 19576..20742 1 NC_009831.1 KEGG: ppr:PBPRA3400 transport permease; chloramphenicol O-acetyltransferase 20742 5609690 Ssed_0017 Shewanella sediminis HAW-EB3 chloramphenicol O-acetyltransferase YP_001471758.1 19576 D 425104 CDS YP_001471759.1 157373159 5609691 complement(20933..24178) 1 NC_009831.1 KEGG: slo:Shew_0013 amidohydrolase; amidohydrolase 24178 5609691 Ssed_0018 Shewanella sediminis HAW-EB3 amidohydrolase YP_001471759.1 20933 R 425104 CDS YP_001471760.1 157373160 5612851 complement(24405..24845) 1 NC_009831.1 KEGG: she:Shewmr4_0012 hypothetical protein; hypothetical protein 24845 5612851 Ssed_0019 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471760.1 24405 R 425104 CDS YP_001471761.1 157373161 5612852 complement(24870..25115) 1 NC_009831.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 25115 5612852 Ssed_0020 Shewanella sediminis HAW-EB3 sulfur transfer protein SirA YP_001471761.1 24870 R 425104 CDS YP_001471762.1 157373162 5612853 complement(25322..25789) 1 NC_009831.1 KEGG: slo:Shew_0016 YbaK/EbsC protein; YbaK/EbsC protein 25789 5612853 Ssed_0021 Shewanella sediminis HAW-EB3 YbaK/EbsC protein YP_001471762.1 25322 R 425104 CDS YP_001471763.1 157373163 5612854 complement(26073..27236) 1 NC_009831.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 27236 fadA 5612854 fadA Shewanella sediminis HAW-EB3 3-ketoacyl-CoA thiolase YP_001471763.1 26073 R 425104 CDS YP_001471764.1 157373164 5612855 complement(27258..29408) 1 NC_009831.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 29408 fadB 5612855 fadB Shewanella sediminis HAW-EB3 multifunctional fatty acid oxidation complex subunit alpha YP_001471764.1 27258 R 425104 CDS YP_001471765.1 157373165 5612758 29795..31114 1 NC_009831.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 31114 5612758 Ssed_0024 Shewanella sediminis HAW-EB3 proline dipeptidase YP_001471765.1 29795 D 425104 CDS YP_001471766.1 157373166 5612759 31167..31781 1 NC_009831.1 KEGG: slo:Shew_0021 protein of unknown function UPF0029; hypothetical protein 31781 5612759 Ssed_0025 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471766.1 31167 D 425104 CDS YP_001471767.1 157373167 5612760 31956..33413 1 NC_009831.1 KEGG: slo:Shew_0022 potassium uptake protein, TrkH family; TrkH family potassium uptake protein 33413 5612760 Ssed_0026 Shewanella sediminis HAW-EB3 TrkH family potassium uptake protein YP_001471767.1 31956 D 425104 CDS YP_001471768.1 157373168 5612761 33511..34038 1 NC_009831.1 KEGG: slo:Shew_0023 protoporphyrinogen oxidase; protoporphyrinogen oxidase 34038 5612761 Ssed_0027 Shewanella sediminis HAW-EB3 protoporphyrinogen oxidase YP_001471768.1 33511 D 425104 CDS YP_001471769.1 157373169 5610100 complement(34180..34488) 1 NC_009831.1 KEGG: shw:Sputw3181_0018 regulatory protein, ArsR; regulatory protein ArsR 34488 5610100 Ssed_0028 Shewanella sediminis HAW-EB3 regulatory protein ArsR YP_001471769.1 34180 R 425104 CDS YP_001471770.1 157373170 5610101 34690..35229 1 NC_009831.1 KEGG: slo:Shew_0025 protoporphyrinogen oxidase; protoporphyrinogen oxidase 35229 5610101 Ssed_0029 Shewanella sediminis HAW-EB3 protoporphyrinogen oxidase YP_001471770.1 34690 D 425104 CDS YP_001471771.1 157373171 5610102 35726..36166 1 NC_009831.1 hypothetical protein 36166 5610102 Ssed_0030 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471771.1 35726 D 425104 CDS YP_001471772.1 157373172 5610103 complement(36602..38044) 1 NC_009831.1 KEGG: slo:Shew_3740 potassium uptake protein, TrkH family; TrkH family potassium uptake protein 38044 5610103 Ssed_0031 Shewanella sediminis HAW-EB3 TrkH family potassium uptake protein YP_001471772.1 36602 R 425104 CDS YP_001471773.1 157373173 5610104 complement(38087..39496) 1 NC_009831.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 39496 trkA 5610104 trkA Shewanella sediminis HAW-EB3 potassium transporter peripheral membrane protein YP_001471773.1 38087 R 425104 CDS YP_001471774.1 157373174 5613591 complement(39506..40786) 1 NC_009831.1 KEGG: slo:Shew_3738 sun protein; sun protein 40786 5613591 Ssed_0033 Shewanella sediminis HAW-EB3 sun protein YP_001471774.1 39506 R 425104 CDS YP_001471775.1 157373175 5613592 complement(40788..41777) 1 NC_009831.1 KEGG: she:Shewmr4_0028 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 41777 5613592 Ssed_0034 Shewanella sediminis HAW-EB3 methionyl-tRNA formyltransferase YP_001471775.1 40788 R 425104 CDS YP_001471776.1 157373176 5613593 complement(41785..42297) 1 NC_009831.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 42297 def 5613593 def Shewanella sediminis HAW-EB3 peptide deformylase YP_001471776.1 41785 R 425104 CDS YP_001471777.1 157373177 5613594 42423..43526 1 NC_009831.1 KEGG: slo:Shew_3735 peptidoglycan-binding LysM; peptidoglycan-binding LysM 43526 5613594 Ssed_0036 Shewanella sediminis HAW-EB3 peptidoglycan-binding LysM YP_001471777.1 42423 D 425104 CDS YP_001471778.1 157373178 5613595 43565..44671 1 NC_009831.1 KEGG: slo:Shew_3734 DNA protecting protein DprA; DNA protecting protein DprA 44671 5613595 Ssed_0037 Shewanella sediminis HAW-EB3 DNA protecting protein DprA YP_001471778.1 43565 D 425104 CDS YP_001471779.1 157373179 5613694 44674..45147 1 NC_009831.1 KEGG: slo:Shew_3733 protein of unknown function DUF494; hypothetical protein 45147 5613694 Ssed_0038 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471779.1 44674 D 425104 CDS YP_001471780.1 157373180 5613695 complement(45367..47139) 1 NC_009831.1 KEGG: slo:Shew_3732 microbial collagenase; collagenase 47139 5613695 Ssed_0039 Shewanella sediminis HAW-EB3 collagenase YP_001471780.1 45367 R 425104 CDS YP_001471781.1 157373181 5613696 47275..47838 1 NC_009831.1 KEGG: slo:Shew_3731 DNA topoisomerase, type IA, Zn finger domain protein; DNA topoisomerase type IA Zn finger domain-containing protein 47838 5613696 Ssed_0040 Shewanella sediminis HAW-EB3 DNA topoisomerase type IA Zn finger domain-containing protein YP_001471781.1 47275 D 425104 CDS YP_001471782.1 157373182 5613697 47939..48496 1 NC_009831.1 KEGG: slo:Shew_3730 SUA5/YciO/YrdC/YwlC family protein; SUA5/YciO/YrdC/YwlC family protein 48496 5613697 Ssed_0041 Shewanella sediminis HAW-EB3 SUA5/YciO/YrdC/YwlC family protein YP_001471782.1 47939 D 425104 CDS YP_001471783.1 157373183 5612496 48531..49451 1 NC_009831.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 49451 5612496 Ssed_0042 Shewanella sediminis HAW-EB3 coproporphyrinogen III oxidase YP_001471783.1 48531 D 425104 CDS YP_001471784.1 157373184 5612497 49687..50502 1 NC_009831.1 KEGG: slo:Shew_3727 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 50502 5612497 Ssed_0043 Shewanella sediminis HAW-EB3 shikimate 5-dehydrogenase YP_001471784.1 49687 D 425104 CDS YP_001471785.1 157373185 5612498 50517..50795 1 NC_009831.1 KEGG: vpa:VP3032 hypothetical protein; hypothetical protein 50795 5612498 Ssed_0044 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471785.1 50517 D 425104 CDS YP_001471786.1 157373186 5612499 complement(50829..51383) 1 NC_009831.1 KEGG: slo:Shew_3725 carbonic anhydrase, family 3; carbonic anhydrase 51383 5612499 Ssed_0045 Shewanella sediminis HAW-EB3 carbonic anhydrase YP_001471786.1 50829 R 425104 CDS YP_001471787.1 157373187 5612066 58078..60588 1 NC_009831.1 KEGG: slo:Shew_3724 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 60588 5612066 Ssed_0046 Shewanella sediminis HAW-EB3 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001471787.1 58078 D 425104 CDS YP_001471788.1 157373188 5612890 complement(60833..61006) 1 NC_009831.1 KEGG: sdn:Sden_3629 hypothetical protein; hypothetical protein 61006 5612890 Ssed_0047 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471788.1 60833 R 425104 CDS YP_001471789.1 157373189 5612891 complement(61185..61601) 1 NC_009831.1 KEGG: shw:Sputw3181_0493 type IV pilus assembly PilZ; type IV pilus assembly PilZ 61601 5612891 Ssed_0048 Shewanella sediminis HAW-EB3 type IV pilus assembly PilZ YP_001471789.1 61185 R 425104 CDS YP_001471790.1 157373190 5612892 complement(61598..62608) 1 NC_009831.1 KEGG: sdn:Sden_3631 OmpA/MotB; OmpA/MotB protein 62608 5612892 Ssed_0049 Shewanella sediminis HAW-EB3 OmpA/MotB protein YP_001471790.1 61598 R 425104 CDS YP_001471791.1 157373191 5612893 complement(62608..63465) 1 NC_009831.1 KEGG: sdn:Sden_3632 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 63465 5612893 Ssed_0050 Shewanella sediminis HAW-EB3 MotA/TolQ/ExbB proton channel YP_001471791.1 62608 R 425104 CDS YP_001471792.1 157373192 5612894 complement(63481..64203) 1 NC_009831.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 64203 fliA 5612894 fliA Shewanella sediminis HAW-EB3 flagellar biosynthesis sigma factor YP_001471792.1 63481 R 425104 CDS YP_001471793.1 157373193 5610311 complement(64214..64672) 1 NC_009831.1 KEGG: sdn:Sden_3634 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 64672 5610311 Ssed_0052 Shewanella sediminis HAW-EB3 flagellar basal body-associated protein FliL YP_001471793.1 64214 R 425104 CDS YP_001471794.1 157373194 5610312 complement(64688..65839) 1 NC_009831.1 KEGG: sbl:Sbal_3952 flagellar hook-length control protein; hypothetical protein 65839 5610312 Ssed_0053 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471794.1 64688 R 425104 CDS YP_001471795.1 157373195 5610313 complement(65829..66155) 1 NC_009831.1 KEGG: shw:Sputw3181_0487 hypothetical protein; hypothetical protein 66155 5610313 Ssed_0054 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471795.1 65829 R 425104 CDS YP_001471796.1 157373196 5610314 complement(66124..66504) 1 NC_009831.1 KEGG: shw:Sputw3181_0486 flagellar protein FliS; flagellar protein FliS 66504 5610314 Ssed_0055 Shewanella sediminis HAW-EB3 flagellar protein FliS YP_001471796.1 66124 R 425104 CDS YP_001471797.1 157373197 5610966 complement(66518..67894) 1 NC_009831.1 KEGG: shw:Sputw3181_0485 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain-containing protein 67894 5610966 Ssed_0056 Shewanella sediminis HAW-EB3 flagellar hook-associated 2 domain-containing protein YP_001471797.1 66518 R 425104 CDS YP_001471798.1 157373198 5610967 complement(68291..69085) 1 NC_009831.1 KEGG: shw:Sputw3181_0483 flagellin domain protein; flagellin domain-containing protein 69085 5610967 Ssed_0057 Shewanella sediminis HAW-EB3 flagellin domain-containing protein YP_001471798.1 68291 R 425104 CDS YP_001471799.1 157373199 5610968 complement(69675..70700) 1 NC_009831.1 KEGG: spc:Sputcn32_3457 hypothetical protein; hypothetical protein 70700 5610968 Ssed_0058 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471799.1 69675 R 425104 CDS YP_001471800.1 157373200 5610969 complement(70710..71627) 1 NC_009831.1 KEGG: spc:Sputcn32_3458 flagellar hook-associated protein 3; flagellar hook-associated protein 3 71627 5610969 Ssed_0059 Shewanella sediminis HAW-EB3 flagellar hook-associated protein 3 YP_001471800.1 70710 R 425104 CDS YP_001471801.1 157373201 5610970 complement(71640..73013) 1 NC_009831.1 KEGG: spc:Sputcn32_3459 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 73013 5610970 Ssed_0060 Shewanella sediminis HAW-EB3 flagellar hook-associated protein FlgK YP_001471801.1 71640 R 425104 CDS YP_001471802.1 157373202 5610791 complement(73080..73517) 1 NC_009831.1 FlgJ; flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain; peptidoglycan hydrolase 73517 flgJ 5610791 flgJ Shewanella sediminis HAW-EB3 peptidoglycan hydrolase YP_001471802.1 73080 R 425104 CDS YP_001471803.1 157373203 5610792 complement(73517..74644) 1 NC_009831.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 74644 flgI 5610792 flgI Shewanella sediminis HAW-EB3 flagellar basal body P-ring protein YP_001471803.1 73517 R 425104 CDS YP_001471804.1 157373204 5610793 complement(74739..75401) 1 NC_009831.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 75401 flgH 5610793 flgH Shewanella sediminis HAW-EB3 flagellar basal body L-ring protein YP_001471804.1 74739 R 425104 CDS YP_001471805.1 157373205 5610794 complement(75446..76231) 1 NC_009831.1 KEGG: spc:Sputcn32_3463 flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgG 76231 5610794 Ssed_0064 Shewanella sediminis HAW-EB3 flagellar basal-body rod protein FlgG YP_001471805.1 75446 R 425104 CDS YP_001471806.1 157373206 5610795 complement(76302..77036) 1 NC_009831.1 KEGG: shw:Sputw3181_0475 flagellar basal-body rod protein FlgF; flagellar basal-body rod protein FlgF 77036 5610795 Ssed_0065 Shewanella sediminis HAW-EB3 flagellar basal-body rod protein FlgF YP_001471806.1 76302 R 425104 CDS YP_001471807.1 157373207 5610626 complement(77047..78243) 1 NC_009831.1 the hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar hook protein FlgE 78243 flgE 5610626 flgE Shewanella sediminis HAW-EB3 flagellar hook protein FlgE YP_001471807.1 77047 R 425104 CDS YP_001471808.1 157373208 5610627 complement(78272..78937) 1 NC_009831.1 KEGG: shw:Sputw3181_0473 flagellar hook capping protein; flagellar hook capping protein 78937 5610627 Ssed_0067 Shewanella sediminis HAW-EB3 flagellar hook capping protein YP_001471808.1 78272 R 425104 CDS YP_001471809.1 157373209 5610628 complement(79003..79422) 1 NC_009831.1 KEGG: shw:Sputw3181_0472 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 79422 5610628 Ssed_0068 Shewanella sediminis HAW-EB3 flagellar basal-body rod protein FlgC YP_001471809.1 79003 R 425104 CDS YP_001471810.1 157373210 5610629 complement(79521..79871) 1 NC_009831.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar basal body rod protein FlgB 79871 flgB 5610629 flgB Shewanella sediminis HAW-EB3 flagellar basal body rod protein FlgB YP_001471810.1 79521 R 425104 CDS YP_001471811.1 157373211 5613952 79958..80704 1 NC_009831.1 KEGG: shw:Sputw3181_0470 SAF domain; SAF domain-containing protein 80704 5613952 Ssed_0070 Shewanella sediminis HAW-EB3 SAF domain-containing protein YP_001471811.1 79958 D 425104 CDS YP_001471812.1 157373212 5613953 80780..81064 1 NC_009831.1 KEGG: shw:Sputw3181_0469 hypothetical protein; hypothetical protein 81064 5613953 Ssed_0071 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471812.1 80780 D 425104 CDS YP_001471813.1 157373213 5613954 81067..81504 1 NC_009831.1 KEGG: shw:Sputw3181_0468 hypothetical protein; hypothetical protein 81504 5613954 Ssed_0072 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471813.1 81067 D 425104 CDS YP_001471814.1 157373214 5613955 complement(81517..81951) 1 NC_009831.1 KEGG: sdn:Sden_3655 hypothetical protein; hypothetical protein 81951 5613955 Ssed_0073 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471814.1 81517 R 425104 CDS YP_001471815.1 157373215 5613956 complement(81966..83309) 1 NC_009831.1 KEGG: sbl:Sbal_3976 ATPase, FliI/YscN family; FliI/YscN family ATPase 83309 5613956 Ssed_0074 Shewanella sediminis HAW-EB3 FliI/YscN family ATPase YP_001471815.1 81966 R 425104 CDS YP_001471816.1 157373216 5613480 complement(83299..84057) 1 NC_009831.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 84057 fliH 5613480 fliH Shewanella sediminis HAW-EB3 flagellar assembly protein H YP_001471816.1 83299 R 425104 CDS YP_001471817.1 157373217 5613481 complement(84057..85070) 1 NC_009831.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 85070 fliG 5613481 fliG Shewanella sediminis HAW-EB3 flagellar motor switch protein G YP_001471817.1 84057 R 425104 CDS YP_001471818.1 157373218 5613482 complement(85129..86841) 1 NC_009831.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar MS-ring protein 86841 fliF 5613482 fliF Shewanella sediminis HAW-EB3 flagellar MS-ring protein YP_001471818.1 85129 R 425104 CDS YP_001471819.1 157373219 5613483 complement(86938..87276) 1 NC_009831.1 KEGG: shw:Sputw3181_0462 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 87276 5613483 Ssed_0078 Shewanella sediminis HAW-EB3 flagellar hook-basal body complex subunit FliE YP_001471819.1 86938 R 425104 CDS YP_001471820.1 157373220 5613484 complement(87319..88620) 1 NC_009831.1 KEGG: shw:Sputw3181_0461 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 88620 5613484 Ssed_0079 Shewanella sediminis HAW-EB3 sigma-54 dependent trancsriptional regulator YP_001471820.1 87319 R 425104 CDS YP_001471821.1 157373221 5613446 complement(88607..89521) 1 NC_009831.1 KEGG: ppr:PBPRA0019 hypothetical protein; hypothetical protein 89521 5613446 Ssed_0080 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471821.1 88607 R 425104 CDS YP_001471822.1 157373222 5613447 90188..91054 1 NC_009831.1 KEGG: shw:Sputw3181_0460 hypothetical protein; hypothetical protein 91054 5613447 Ssed_0081 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471822.1 90188 D 425104 CDS YP_001471823.1 157373223 5613448 91135..91491 1 NC_009831.1 KEGG: shw:Sputw3181_0459 flagellar motor switch protein FliN; flagellar motor switch protein FliN 91491 5613448 Ssed_0082 Shewanella sediminis HAW-EB3 flagellar motor switch protein FliN YP_001471823.1 91135 D 425104 CDS YP_001471824.1 157373224 5613250 91494..92222 1 NC_009831.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 92222 fliP 5613250 fliP Shewanella sediminis HAW-EB3 flagellar biosynthesis protein FliP YP_001471824.1 91494 D 425104 CDS YP_001471825.1 157373225 5613251 92434..92703 1 NC_009831.1 KEGG: sbl:Sbal_3985 export protein FliQ, family 3; export protein FliQ 92703 5613251 Ssed_0084 Shewanella sediminis HAW-EB3 export protein FliQ YP_001471825.1 92434 D 425104 CDS YP_001471826.1 157373226 5613252 92706..93479 1 NC_009831.1 KEGG: sbl:Sbal_3986 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 93479 5613252 Ssed_0085 Shewanella sediminis HAW-EB3 flagellar biosynthetic protein FliR YP_001471826.1 92706 D 425104 CDS YP_001471827.1 157373227 5613253 93496..94626 1 NC_009831.1 KEGG: sdn:Sden_3667 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 94626 5613253 Ssed_0086 Shewanella sediminis HAW-EB3 flagellar biosynthetic protein FlhB YP_001471827.1 93496 D 425104 CDS YP_001471828.1 157373228 5613404 94830..96911 1 NC_009831.1 KEGG: shw:Sputw3181_0454 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 96911 5613404 Ssed_0087 Shewanella sediminis HAW-EB3 flagellar biosynthesis protein FlhA YP_001471828.1 94830 D 425104 CDS YP_001471829.1 157373229 5613405 complement(97042..98034) 1 NC_009831.1 KEGG: shn:Shewana3_4119 alpha/beta hydrolase fold; lysophospholipase 98034 5613405 Ssed_0088 Shewanella sediminis HAW-EB3 lysophospholipase YP_001471829.1 97042 R 425104 CDS YP_001471830.1 157373230 5613406 complement(98169..99968) 1 NC_009831.1 KEGG: sbl:Sbal_0045 protein of unknown function DUF885; hypothetical protein 99968 5613406 Ssed_0089 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471830.1 98169 R 425104 CDS YP_001471831.1 157373231 5613306 complement(100160..101500) 1 NC_009831.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 101500 5613306 Ssed_0090 Shewanella sediminis HAW-EB3 coproporphyrinogen III oxidase YP_001471831.1 100160 R 425104 CDS YP_001471832.1 157373232 5613307 complement(101794..102273) 1 NC_009831.1 KEGG: son:SO4729 hypothetical protein; hypothetical protein 102273 5613307 Ssed_0091 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471832.1 101794 R 425104 CDS YP_001471833.1 157373233 5613308 complement(102406..102942) 1 NC_009831.1 KEGG: slo:Shew_3718 hypothetical protein; hypothetical protein 102942 5613308 Ssed_0092 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471833.1 102406 R 425104 CDS YP_001471834.1 157373234 5613309 complement(102991..103689) 1 NC_009831.1 KEGG: slo:Shew_3717 hypothetical protein; hypothetical protein 103689 5613309 Ssed_0093 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471834.1 102991 R 425104 CDS YP_001471835.1 157373235 5613078 complement(104402..105022) 1 NC_009831.1 KEGG: slo:Shew_3716 cytochrome c, class I; cytochrome c, class I 105022 5613078 Ssed_0094 Shewanella sediminis HAW-EB3 cytochrome c, class I YP_001471835.1 104402 R 425104 CDS YP_001471836.1 157373236 5613079 105192..105854 1 NC_009831.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 105854 engB 5613079 engB Shewanella sediminis HAW-EB3 ribosome biogenesis GTP-binding protein YsxC YP_001471836.1 105192 D 425104 CDS YP_001471837.1 157373237 5613080 complement(106612..109413) 1 NC_009831.1 KEGG: slo:Shew_3714 DNA polymerase I; DNA-directed DNA polymerase 109413 5613080 Ssed_0096 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001471837.1 106612 R 425104 CDS YP_001471838.1 157373238 5613081 109761..110414 1 NC_009831.1 KEGG: shn:Shewana3_4108 ThiJ/PfpI domain protein; isoprenoid biosynthesis protein with amidotransferase-like domain 110414 5613081 Ssed_0097 Shewanella sediminis HAW-EB3 isoprenoid biosynthesis protein with amidotransferase-like domain YP_001471838.1 109761 D 425104 CDS YP_001471839.1 157373239 5612911 complement(110846..111682) 1 NC_009831.1 KEGG: slo:Shew_3712 rhomboid family protein; rhomboid family protein 111682 5612911 Ssed_0098 Shewanella sediminis HAW-EB3 rhomboid family protein YP_001471839.1 110846 R 425104 CDS YP_001471840.1 157373240 5612912 complement(111747..112055) 1 NC_009831.1 KEGG: slo:Shew_3711 rhodanese domain protein; rhodanese domain-containing protein 112055 5612912 Ssed_0099 Shewanella sediminis HAW-EB3 rhodanese domain-containing protein YP_001471840.1 111747 R 425104 CDS YP_001471841.1 157373241 5612913 complement(112132..113157) 1 NC_009831.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 113157 tdh 5612913 tdh Shewanella sediminis HAW-EB3 L-threonine 3-dehydrogenase YP_001471841.1 112132 R 425104 CDS YP_001471842.1 157373242 5612914 complement(113194..114387) 1 NC_009831.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 114387 5612914 Ssed_0101 Shewanella sediminis HAW-EB3 2-amino-3-ketobutyrate CoA ligase YP_001471842.1 113194 R 425104 CDS YP_001471843.1 157373243 5612954 complement(115044..115700) 1 NC_009831.1 KEGG: sbl:Sbal_0059 transcriptional regulator, TetR family; TetR family transcriptional regulator 115700 5612954 Ssed_0102 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001471843.1 115044 R 425104 CDS YP_001471844.1 157373244 5612955 complement(116061..116738) 1 NC_009831.1 KEGG: spc:Sputcn32_3900 transcriptional regulator, TetR family; TetR family transcriptional regulator 116738 5612955 Ssed_0103 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001471844.1 116061 R 425104 CDS YP_001471845.1 157373245 5612956 116896..118164 1 NC_009831.1 KEGG: slo:Shew_3707 three-deoxy-D-manno-octulosonic-acid transferase domain protein; 3-deoxy-D-manno-octulosonic-acid transferase 118164 5612956 Ssed_0104 Shewanella sediminis HAW-EB3 3-deoxy-D-manno-octulosonic-acid transferase YP_001471845.1 116896 D 425104 CDS YP_001471846.1 157373246 5612685 complement(119268..119990) 1 NC_009831.1 catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 119990 5612685 Ssed_0105 Shewanella sediminis HAW-EB3 3-deoxy-D-manno-octulosonic-acid kinase YP_001471846.1 119268 R 425104 CDS YP_001471847.1 157373247 5612686 complement(120074..120943) 1 NC_009831.1 KEGG: pat:Patl_2129 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 120943 5612686 Ssed_0106 Shewanella sediminis HAW-EB3 dTDP-4-dehydrorhamnose reductase YP_001471847.1 120074 R 425104 CDS YP_001471848.1 157373248 5612687 complement(120940..122043) 1 NC_009831.1 KEGG: abo:ABO_0910 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 122043 5612687 Ssed_0107 Shewanella sediminis HAW-EB3 dTDP-glucose 4,6-dehydratase YP_001471848.1 120940 R 425104 CDS YP_001471849.1 157373249 5612688 complement(122040..122612) 1 NC_009831.1 KEGG: shn:Shewana3_1382 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 122612 5612688 Ssed_0108 Shewanella sediminis HAW-EB3 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001471849.1 122040 R 425104 CDS YP_001471850.1 157373250 5612856 122793..123821 1 NC_009831.1 KEGG: slo:Shew_3702 glycosyl transferase, family 9; glycosyl transferase family protein 123821 5612856 Ssed_0109 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001471850.1 122793 D 425104 CDS YP_001471851.1 157373251 5612857 123931..124686 1 NC_009831.1 KEGG: sdn:Sden_0205 glycosyl transferase, family 2; glycosyl transferase family protein 124686 5612857 Ssed_0110 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001471851.1 123931 D 425104 CDS YP_001471852.1 157373252 5612858 125110..125868 1 NC_009831.1 KEGG: sdn:Sden_0207 glycosyl transferase, family 25; glycosyl transferase family protein 125868 5612858 Ssed_0111 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001471852.1 125110 D 425104 CDS YP_001471853.1 157373253 5612859 complement(125937..127007) 1 NC_009831.1 KEGG: chy:CHY_2583 glycerol-1-phosphate dehydrogenase; glycerol dehydrogenase 127007 5612859 Ssed_0112 Shewanella sediminis HAW-EB3 glycerol dehydrogenase YP_001471853.1 125937 R 425104 CDS YP_001471854.1 157373254 5612450 complement(127008..127427) 1 NC_009831.1 KEGG: sfr:Sfri_3930 cytidyltransferase-related domain; cytidyltransferase-like protein 127427 5612450 Ssed_0113 Shewanella sediminis HAW-EB3 cytidyltransferase-like protein YP_001471854.1 127008 R 425104 CDS YP_001471855.1 157373255 5612451 127714..128772 1 NC_009831.1 KEGG: sfr:Sfri_3931 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 128772 5612451 Ssed_0114 Shewanella sediminis HAW-EB3 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_001471855.1 127714 D 425104 CDS YP_001471856.1 157373256 5612452 128826..129302 1 NC_009831.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 129302 coaD 5612452 coaD Shewanella sediminis HAW-EB3 phosphopantetheine adenylyltransferase YP_001471856.1 128826 D 425104 CDS YP_001471857.1 157373257 5612453 129317..130810 1 NC_009831.1 KEGG: slo:Shew_3691 hypothetical protein; hypothetical protein 130810 5612453 Ssed_0116 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471857.1 129317 D 425104 CDS YP_001471858.1 157373258 5612418 complement(130893..131714) 1 NC_009831.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 131714 5612418 Ssed_0117 Shewanella sediminis HAW-EB3 formamidopyrimidine-DNA glycosylase YP_001471858.1 130893 R 425104 CDS YP_001471859.1 157373259 5612419 complement(131773..132255) 1 NC_009831.1 KEGG: sbl:Sbal_0076 hypothetical protein; hypothetical protein 132255 5612419 Ssed_0118 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471859.1 131773 R 425104 CDS YP_001471860.1 157373260 5612420 complement(132415..133401) 1 NC_009831.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 133401 5612420 Ssed_0119 Shewanella sediminis HAW-EB3 molybdenum cofactor biosynthesis protein A YP_001471860.1 132415 R 425104 CDS YP_001471861.1 157373261 5612442 complement(133479..135284) 1 NC_009831.1 KEGG: slo:Shew_3687 molybdopterin-guanine dinucleotide biosynthesis protein B; bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA 135284 5612442 Ssed_0120 Shewanella sediminis HAW-EB3 bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA YP_001471861.1 133479 R 425104 CDS YP_001471862.1 157373262 5612443 complement(135299..135889) 1 NC_009831.1 KEGG: slo:Shew_3686 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 135889 5612443 Ssed_0121 Shewanella sediminis HAW-EB3 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_001471862.1 135299 R 425104 CDS YP_001471863.1 157373263 5612444 complement(135873..136592) 1 NC_009831.1 KEGG: slo:Shew_3685 ABC transporter-related protein; ABC transporter-like protein 136592 5612444 Ssed_0122 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001471863.1 135873 R 425104 CDS YP_001471864.1 157373264 5612445 complement(136595..137302) 1 NC_009831.1 KEGG: slo:Shew_3684 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 137302 5612445 Ssed_0123 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001471864.1 136595 R 425104 CDS YP_001471865.1 157373265 5612309 complement(137397..138209) 1 NC_009831.1 KEGG: slo:Shew_3683 extracellular solute-binding protein, family 1; extracellular solute-binding protein 138209 5612309 Ssed_0124 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001471865.1 137397 R 425104 CDS YP_001471866.1 157373266 5612310 138433..139866 1 NC_009831.1 KEGG: slo:Shew_3682 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 139866 5612310 Ssed_0125 Shewanella sediminis HAW-EB3 two component, sigma54 specific, Fis family transcriptional regulator YP_001471866.1 138433 D 425104 CDS YP_001471867.1 157373267 5612311 139868..141985 1 NC_009831.1 KEGG: slo:Shew_3681 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 141985 5612311 Ssed_0126 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001471867.1 139868 D 425104 CDS YP_001471868.1 157373268 5612342 complement(142251..142721) 1 NC_009831.1 KEGG: saz:Sama_0127 acetyltransferase, GNAT family; acetyltransferase 142721 5612342 Ssed_0127 Shewanella sediminis HAW-EB3 acetyltransferase YP_001471868.1 142251 R 425104 CDS YP_001471869.1 157373269 5612343 complement(142834..143499) 1 NC_009831.1 KEGG: sbl:Sbal_0086 hypothetical protein; hypothetical protein 143499 5612343 Ssed_0128 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471869.1 142834 R 425104 CDS YP_001471870.1 157373270 5612344 143796..144581 1 NC_009831.1 KEGG: shw:Sputw3181_0079 hypothetical protein; hypothetical protein 144581 5612344 Ssed_0129 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471870.1 143796 D 425104 CDS YP_001471871.1 157373271 5612345 complement(144687..145931) 1 NC_009831.1 KEGG: slo:Shew_3677 isochorismate synthase; isochorismate synthase 145931 5612345 Ssed_0130 Shewanella sediminis HAW-EB3 isochorismate synthase YP_001471871.1 144687 R 425104 CDS YP_001471872.1 157373272 5612277 146463..148496 1 NC_009831.1 KEGG: sbl:Sbal_0089 TonB-dependent receptor, plug; TonB-dependent receptor, plug 148496 5612277 Ssed_0131 Shewanella sediminis HAW-EB3 TonB-dependent receptor, plug YP_001471872.1 146463 D 425104 CDS YP_001471873.1 157373273 5612278 148659..150035 1 NC_009831.1 KEGG: sbl:Sbal_0090 ABC transporter related; ABC transporter 150035 5612278 Ssed_0132 Shewanella sediminis HAW-EB3 ABC transporter YP_001471873.1 148659 D 425104 CDS YP_001471874.1 157373274 5612279 150025..150717 1 NC_009831.1 KEGG: sbl:Sbal_0091 cobalt transport protein; cobalt transport protein 150717 5612279 Ssed_0133 Shewanella sediminis HAW-EB3 cobalt transport protein YP_001471874.1 150025 D 425104 CDS YP_001471875.1 157373275 5612188 150785..151330 1 NC_009831.1 KEGG: slo:Shew_3673 hypothetical protein; hypothetical protein 151330 5612188 Ssed_0134 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471875.1 150785 D 425104 CDS YP_001471876.1 157373276 5612189 151331..152086 1 NC_009831.1 KEGG: slo:Shew_3672 hypothetical protein; hypothetical protein 152086 5612189 Ssed_0135 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471876.1 151331 D 425104 CDS YP_001471877.1 157373277 5612190 152092..152310 1 NC_009831.1 KEGG: shm:Shewmr7_3955 hypothetical protein; hypothetical protein 152310 5612190 Ssed_0136 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471877.1 152092 D 425104 CDS YP_001471878.1 157373278 5612191 152571..153749 1 NC_009831.1 KEGG: son:SO4711 HD domain protein; HD domain-containing protein 153749 5612191 Ssed_0137 Shewanella sediminis HAW-EB3 HD domain-containing protein YP_001471878.1 152571 D 425104 CDS YP_001471879.1 157373279 5611677 153896..154564 1 NC_009831.1 KEGG: sbl:Sbal_0097 paraquat-inducible protein A; paraquat-inducible protein A 154564 5611677 Ssed_0138 Shewanella sediminis HAW-EB3 paraquat-inducible protein A YP_001471879.1 153896 D 425104 CDS YP_001471880.1 157373280 5611678 complement(154595..157789) 1 NC_009831.1 KEGG: neu:NE0049 sensory transduction histidine kinase; histidine kinase 157789 5611678 Ssed_0139 Shewanella sediminis HAW-EB3 histidine kinase YP_001471880.1 154595 R 425104 CDS YP_001471881.1 157373281 5611679 158116..158796 1 NC_009831.1 KEGG: slo:Shew_3669 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 158796 5611679 Ssed_0140 Shewanella sediminis HAW-EB3 ThiJ/PfpI domain-containing protein YP_001471881.1 158116 D 425104 CDS YP_001471882.1 157373282 5611680 complement(159371..160315) 1 NC_009831.1 KEGG: spc:Sputcn32_3868 conserved hypothetical protein 698; hypothetical protein 160315 5611680 Ssed_0141 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471882.1 159371 R 425104 CDS YP_001471883.1 157373283 5611837 complement(160490..161845) 1 NC_009831.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 161845 5611837 Ssed_0142 Shewanella sediminis HAW-EB3 glutathione reductase YP_001471883.1 160490 R 425104 CDS YP_001471884.1 157373284 5611838 complement(162024..162545) 1 NC_009831.1 KEGG: shn:Shewana3_4053 hypothetical protein; hypothetical protein 162545 5611838 Ssed_0143 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471884.1 162024 R 425104 CDS YP_001471885.1 157373285 5611839 complement(162665..163441) 1 NC_009831.1 KEGG: slo:Shew_3658 hypothetical protein; hypothetical protein 163441 5611839 Ssed_0144 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471885.1 162665 R 425104 CDS YP_001471886.1 157373286 5610995 163745..165784 1 NC_009831.1 KEGG: slo:Shew_3657 oligopeptidase A; oligopeptidase A 165784 5610995 Ssed_0145 Shewanella sediminis HAW-EB3 oligopeptidase A YP_001471886.1 163745 D 425104 CDS YP_001471887.1 157373287 5610996 complement(165926..166345) 1 NC_009831.1 hypothetical protein 166345 5610996 Ssed_0146 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471887.1 165926 R 425104 CDS YP_001471888.1 157373288 5610997 166663..167193 1 NC_009831.1 KEGG: shm:Shewmr7_3934 hypothetical protein; hypothetical protein 167193 5610997 Ssed_0147 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471888.1 166663 D 425104 CDS YP_001471889.1 157373289 5610998 complement(167248..167898) 1 NC_009831.1 KEGG: slo:Shew_0027 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 167898 5610998 Ssed_0148 Shewanella sediminis HAW-EB3 glutathione S-transferase domain-containing protein YP_001471889.1 167248 R 425104 CDS YP_001471890.1 157373290 5611490 complement(168072..168977) 1 NC_009831.1 KEGG: saz:Sama_3549 transcriptional regulator, LyrR family; LyrR family transcriptional regulator 168977 5611490 Ssed_0149 Shewanella sediminis HAW-EB3 LyrR family transcriptional regulator YP_001471890.1 168072 R 425104 CDS YP_001471891.1 157373291 5611491 169192..169881 1 NC_009831.1 KEGG: sbl:Sbal_0127 conserved hypothetical 3-methyladenine DNA glycosylase; 3-methyladenine DNA glycosylase 169881 5611491 Ssed_0150 Shewanella sediminis HAW-EB3 3-methyladenine DNA glycosylase YP_001471891.1 169192 D 425104 CDS YP_001471892.1 157373292 5611492 complement(170152..170910) 1 NC_009831.1 KEGG: slo:Shew_0030 hypothetical protein; hypothetical protein 170910 5611492 Ssed_0151 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471892.1 170152 R 425104 CDS YP_001471893.1 157373293 5611132 171346..172503 1 NC_009831.1 KEGG: slo:Shew_0031 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 172503 5611132 Ssed_0152 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001471893.1 171346 D 425104 CDS YP_001471894.1 157373294 5611133 172513..175665 1 NC_009831.1 KEGG: slo:Shew_0032 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 175665 5611133 Ssed_0153 Shewanella sediminis HAW-EB3 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001471894.1 172513 D 425104 CDS YP_001471895.1 157373295 5611134 complement(175802..176479) 1 NC_009831.1 KEGG: sfr:Sfri_2500 glutathione S-transferase, C-terminal domain protein; glutathione S-transferase domain-containing protein 176479 5611134 Ssed_0154 Shewanella sediminis HAW-EB3 glutathione S-transferase domain-containing protein YP_001471895.1 175802 R 425104 CDS YP_001471896.1 157373296 5611135 176652..177554 1 NC_009831.1 KEGG: sfr:Sfri_2100 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 177554 5611135 Ssed_0155 Shewanella sediminis HAW-EB3 mechanosensitive ion channel protein MscS YP_001471896.1 176652 D 425104 CDS YP_001471897.1 157373297 5613902 complement(177647..179263) 1 NC_009831.1 KEGG: slo:Shew_3654 AbgT transporter; AbgT transporter 179263 5613902 Ssed_0156 Shewanella sediminis HAW-EB3 AbgT transporter YP_001471897.1 177647 R 425104 CDS YP_001471898.1 157373298 5613903 180321..180890 1 NC_009831.1 KEGG: slo:Shew_3652 LemA family protein; LemA family protein 180890 5613903 Ssed_0157 Shewanella sediminis HAW-EB3 LemA family protein YP_001471898.1 180321 D 425104 CDS YP_001471899.1 157373299 5613904 180949..181959 1 NC_009831.1 KEGG: slo:Shew_3651 hypothetical protein; hypothetical protein 181959 5613904 Ssed_0158 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471899.1 180949 D 425104 CDS YP_001471900.1 157373300 5613905 181968..182705 1 NC_009831.1 KEGG: slo:Shew_3650 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic 182705 5613905 Ssed_0159 Shewanella sediminis HAW-EB3 lytic transglycosylase, catalytic YP_001471900.1 181968 D 425104 CDS YP_001471901.1 157373301 5613235 complement(182868..184274) 1 NC_009831.1 sodium/drug antiporter; functions as a Na(+)-driven Na(+)/drug antiporter; member of multidrug and toxic compound extrusion (MATE) family; extrudes acriflavines and other compounds by utilizing the sodium gradient; multidrug efflux pump VmrA 184274 vmrA 5613235 vmrA Shewanella sediminis HAW-EB3 multidrug efflux pump VmrA YP_001471901.1 182868 R 425104 CDS YP_001471902.1 157373302 5613236 184437..185330 1 NC_009831.1 KEGG: ppr:PBPRB1939 hypothetical transcriptional regulator; transcriptional regulator 185330 5613236 Ssed_0161 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001471902.1 184437 D 425104 CDS YP_001471903.1 157373303 5613237 185416..185787 1 NC_009831.1 KEGG: spc:Sputcn32_0958 hypothetical protein; hypothetical protein 185787 5613237 Ssed_0162 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471903.1 185416 D 425104 CDS YP_001471904.1 157373304 5613086 complement(185896..186738) 1 NC_009831.1 KEGG: slo:Shew_3648 protein of unknown function DUF519; hypothetical protein 186738 5613086 Ssed_0163 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471904.1 185896 R 425104 CDS YP_001471905.1 157373305 5613087 186935..187711 1 NC_009831.1 KEGG: slo:Shew_3647 protein of unknown function DUF548; hypothetical protein 187711 5613087 Ssed_0164 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471905.1 186935 D 425104 CDS YP_001471906.1 157373306 5613088 complement(187715..188101) 1 NC_009831.1 KEGG: sfr:Sfri_3020 hypothetical protein; hypothetical protein 188101 5613088 Ssed_0165 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471906.1 187715 R 425104 CDS YP_001471907.1 157373307 5613089 complement(188256..189107) 1 NC_009831.1 KEGG: slo:Shew_3640 hypothetical protein; hypothetical protein 189107 5613089 Ssed_0166 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471907.1 188256 R 425104 CDS YP_001471908.1 157373308 5609880 complement(189301..190611) 1 NC_009831.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 190611 envZ 5609880 envZ Shewanella sediminis HAW-EB3 osmolarity sensor protein YP_001471908.1 189301 R 425104 CDS YP_001471909.1 157373309 5609881 complement(190672..191397) 1 NC_009831.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 191397 ompR 5609881 ompR Shewanella sediminis HAW-EB3 osmolarity response regulator YP_001471909.1 190672 R 425104 CDS YP_001471910.1 157373310 5609882 complement(191748..191966) 1 NC_009831.1 KEGG: mem:Memar_1885 protein of unknown function UPF0066; hypothetical protein 191966 5609882 Ssed_0169 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471910.1 191748 R 425104 CDS YP_001471911.1 157373311 5610327 192343..192834 1 NC_009831.1 KEGG: slo:Shew_3636 transcription elongation factor GreB; transcription elongation factor GreB 192834 5610327 Ssed_0170 Shewanella sediminis HAW-EB3 transcription elongation factor GreB YP_001471911.1 192343 D 425104 CDS YP_001471912.1 157373312 5610328 193063..194862 1 NC_009831.1 KEGG: slo:Shew_3635 thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein 194862 5610328 Ssed_0171 Shewanella sediminis HAW-EB3 thiamine pyrophosphate binding domain-containing protein YP_001471912.1 193063 D 425104 CDS YP_001471913.1 157373313 5610329 195071..195442 1 NC_009831.1 hypothetical protein 195442 5610329 Ssed_0172 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471913.1 195071 D 425104 CDS YP_001471914.1 157373314 5610330 195536..197950 1 NC_009831.1 KEGG: slo:Shew_3634 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 197950 5610330 Ssed_0173 Shewanella sediminis HAW-EB3 RNA-binding S1 domain-containing protein YP_001471914.1 195536 D 425104 CDS YP_001471915.1 157373315 5614112 198309..200321 1 NC_009831.1 KEGG: slo:Shew_3632 sulfatase; sulfatase 200321 5614112 Ssed_0174 Shewanella sediminis HAW-EB3 sulfatase YP_001471915.1 198309 D 425104 CDS YP_001471916.1 157373316 5614113 complement(200314..200817) 1 NC_009831.1 KEGG: slo:Shew_3631 hypothetical protein; hypothetical protein 200817 5614113 Ssed_0175 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471916.1 200314 R 425104 CDS YP_001471917.1 157373317 5614114 complement(200878..201672) 1 NC_009831.1 KEGG: shm:Shewmr7_3882 BioH protein; carboxylesterase 201672 5614114 Ssed_0176 Shewanella sediminis HAW-EB3 carboxylesterase YP_001471917.1 200878 R 425104 CDS YP_001471918.1 157373318 5614115 201710..202510 1 NC_009831.1 KEGG: shw:Sputw3181_0113 competence protein ComF; competence protein ComF 202510 5614115 Ssed_0177 Shewanella sediminis HAW-EB3 competence protein ComF YP_001471918.1 201710 D 425104 CDS YP_001471919.1 157373319 5610769 complement(202523..205069) 1 NC_009831.1 KEGG: slo:Shew_0105 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 205069 5610769 Ssed_0178 Shewanella sediminis HAW-EB3 peptidase M14, carboxypeptidase A YP_001471919.1 202523 R 425104 CDS YP_001471920.1 157373320 5610770 205299..205877 1 NC_009831.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 205877 5610770 Ssed_0179 Shewanella sediminis HAW-EB3 DNA uptake protein YP_001471920.1 205299 D 425104 CDS YP_001471921.1 157373321 5610771 complement(206370..207707) 1 NC_009831.1 KEGG: sbl:Sbal_0144 MATE efflux family protein; MATE efflux family protein 207707 5610771 Ssed_0180 Shewanella sediminis HAW-EB3 MATE efflux family protein YP_001471921.1 206370 R 425104 CDS YP_001471922.1 157373322 5611416 207731..208792 1 NC_009831.1 KEGG: sbl:Sbal_0145 polysaccharide deacetylase; polysaccharide deacetylase 208792 5611416 Ssed_0181 Shewanella sediminis HAW-EB3 polysaccharide deacetylase YP_001471922.1 207731 D 425104 CDS YP_001471923.1 157373323 5611417 complement(208820..209857) 1 NC_009831.1 KEGG: slo:Shew_0109 response regulator receiver modulated CheB methylesterase; protein-glutamate methylesterase 209857 5611417 Ssed_0182 Shewanella sediminis HAW-EB3 protein-glutamate methylesterase YP_001471923.1 208820 R 425104 CDS YP_001471924.1 157373324 5611418 complement(209961..210803) 1 NC_009831.1 KEGG: saz:Sama_3498 protein-glutamate O-methyltransferase; protein-glutamate O-methyltransferase 210803 5611418 Ssed_0183 Shewanella sediminis HAW-EB3 protein-glutamate O-methyltransferase YP_001471924.1 209961 R 425104 CDS YP_001471925.1 157373325 5611419 complement(210845..213436) 1 NC_009831.1 KEGG: slo:Shew_0111 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor 213436 5611419 Ssed_0184 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor YP_001471925.1 210845 R 425104 CDS YP_001471926.1 157373326 5611820 complement(213460..214011) 1 NC_009831.1 KEGG: slo:Shew_0112 CheW protein; chemotaxis protein CheW 214011 5611820 Ssed_0185 Shewanella sediminis HAW-EB3 chemotaxis protein CheW YP_001471926.1 213460 R 425104 CDS YP_001471927.1 157373327 5611821 complement(214063..216129) 1 NC_009831.1 KEGG: slo:Shew_0113 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 216129 5611821 Ssed_0186 Shewanella sediminis HAW-EB3 CheA signal transduction histidine kinase YP_001471927.1 214063 R 425104 CDS YP_001471928.1 157373328 5611822 complement(216175..216537) 1 NC_009831.1 KEGG: saz:Sama_3494 response regulator receiver protein; response regulator receiver protein 216537 5611822 Ssed_0187 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001471928.1 216175 R 425104 CDS YP_001471929.1 157373329 5611745 complement(216534..216830) 1 NC_009831.1 KEGG: slo:Shew_0115 hypothetical protein; hypothetical protein 216830 5611745 Ssed_0188 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471929.1 216534 R 425104 CDS YP_001471930.1 157373330 5611746 complement(217009..217665) 1 NC_009831.1 KEGG: shw:Sputw3181_0125 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 217665 5611746 Ssed_0189 Shewanella sediminis HAW-EB3 electron transport protein SCO1/SenC YP_001471930.1 217009 R 425104 CDS YP_001471931.1 157373331 5611747 complement(217720..218634) 1 NC_009831.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 218634 5611747 Ssed_0190 Shewanella sediminis HAW-EB3 protoheme IX farnesyltransferase YP_001471931.1 217720 R 425104 CDS YP_001471932.1 157373332 5611748 complement(218712..219698) 1 NC_009831.1 KEGG: slo:Shew_0118 cytochrome oxidase assembly; cytochrome oxidase assembly 219698 5611748 Ssed_0191 Shewanella sediminis HAW-EB3 cytochrome oxidase assembly YP_001471932.1 218712 R 425104 CDS YP_001471933.1 157373333 5612665 complement(219698..220243) 1 NC_009831.1 KEGG: slo:Shew_0119 hypothetical protein; hypothetical protein 220243 5612665 Ssed_0192 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471933.1 219698 R 425104 CDS YP_001471934.1 157373334 5612666 complement(220444..221202) 1 NC_009831.1 KEGG: shw:Sputw3181_0129 hypothetical protein; hypothetical protein 221202 5612666 Ssed_0193 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471934.1 220444 R 425104 CDS YP_001471935.1 157373335 5612667 221213..221398 1 NC_009831.1 KEGG: slo:Shew_0121 hypothetical protein; hypothetical protein 221398 5612667 Ssed_0194 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471935.1 221213 D 425104 CDS YP_001471936.1 157373336 5612668 complement(221470..222345) 1 NC_009831.1 KEGG: slo:Shew_0122 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 222345 5612668 Ssed_0195 Shewanella sediminis HAW-EB3 cytochrome c oxidase subunit III YP_001471936.1 221470 R 425104 CDS YP_001471937.1 157373337 5612482 complement(222342..222911) 1 NC_009831.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 222911 5612482 Ssed_0196 Shewanella sediminis HAW-EB3 cytochrome C oxidase assembly protein YP_001471937.1 222342 R 425104 CDS YP_001471938.1 157373338 5612483 complement(222914..224518) 1 NC_009831.1 KEGG: shm:Shewmr7_3865 cytochrome-c oxidase; cytochrome-c oxidase 224518 5612483 Ssed_0197 Shewanella sediminis HAW-EB3 cytochrome-c oxidase YP_001471938.1 222914 R 425104 CDS YP_001471939.1 157373339 5612484 complement(224528..226102) 1 NC_009831.1 KEGG: slo:Shew_0125 cytochrome c oxidase, subunit II; cytochrome-c oxidase 226102 5612484 Ssed_0198 Shewanella sediminis HAW-EB3 cytochrome-c oxidase YP_001471939.1 224528 R 425104 CDS YP_001471940.1 157373340 5612903 complement(226521..227033) 1 NC_009831.1 KEGG: sbl:Sbal_0155 hypothetical protein; hypothetical protein 227033 5612903 Ssed_0199 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471940.1 226521 R 425104 CDS YP_001471941.1 157373341 5612904 complement(227030..227650) 1 NC_009831.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 227650 5612904 Ssed_0200 Shewanella sediminis HAW-EB3 LexA repressor YP_001471941.1 227030 R 425104 CDS YP_001471942.1 157373342 5612905 227801..230224 1 NC_009831.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 230224 5612905 Ssed_0201 Shewanella sediminis HAW-EB3 glycerol-3-phosphate acyltransferase YP_001471942.1 227801 D 425104 CDS YP_001471943.1 157373343 5612906 230224..231480 1 NC_009831.1 KEGG: slo:Shew_3531 aromatic amino acid transporter; aromatic amino acid transporter 231480 5612906 Ssed_0202 Shewanella sediminis HAW-EB3 aromatic amino acid transporter YP_001471943.1 230224 D 425104 CDS YP_001471944.1 157373344 5614077 complement(231551..232576) 1 NC_009831.1 KEGG: ppr:PBPRB1682 hypothetical AraC-type transcriptional regulator; AraC family transcriptional regulator 232576 5614077 Ssed_0203 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001471944.1 231551 R 425104 CDS YP_001471945.1 157373345 5614078 232705..233040 1 NC_009831.1 KEGG: ppr:PBPRB1681 permease of the major facilitator superfamily; major facilitator superfamily permease 233040 5614078 Ssed_0204 Shewanella sediminis HAW-EB3 major facilitator superfamily permease YP_001471945.1 232705 D 425104 CDS YP_001471946.1 157373346 5614079 233033..234256 1 NC_009831.1 KEGG: ppr:PBPRB1680 multidrug resistance efflux pump; multidrug resistance efflux pump 234256 5614079 Ssed_0205 Shewanella sediminis HAW-EB3 multidrug resistance efflux pump YP_001471946.1 233033 D 425104 CDS YP_001471947.1 157373347 5611486 complement(234315..235505) 1 NC_009831.1 KEGG: sdn:Sden_0245 GGDEF domain; diguanylate cyclase 235505 5611486 Ssed_0206 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001471947.1 234315 R 425104 CDS YP_001471948.1 157373348 5611487 complement(235685..236098) 1 NC_009831.1 KEGG: slo:Shew_3532 globin; globin 236098 5611487 Ssed_0207 Shewanella sediminis HAW-EB3 globin YP_001471948.1 235685 R 425104 CDS YP_001471949.1 157373349 5611488 236322..237110 1 NC_009831.1 KEGG: slo:Shew_3533 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 237110 5611488 Ssed_0208 Shewanella sediminis HAW-EB3 glyoxalase/bleomycin resistance protein/dioxygenase YP_001471949.1 236322 D 425104 CDS YP_001471950.1 157373350 5611489 237230..239263 1 NC_009831.1 KEGG: shw:Sputw3181_2790 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 239263 5611489 Ssed_0209 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001471950.1 237230 D 425104 CDS YP_001471951.1 157373351 5612987 complement(239331..242468) 1 NC_009831.1 KEGG: slo:Shew_3534 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 242468 5612987 Ssed_0210 Shewanella sediminis HAW-EB3 CzcA family heavy metal efflux protein YP_001471951.1 239331 R 425104 CDS YP_001471952.1 157373352 5612988 complement(242600..244552) 1 NC_009831.1 KEGG: slo:Shew_3535 efflux transporter, RND family, MFP subunit; membrane-fusion protein-like protein 244552 5612988 Ssed_0211 Shewanella sediminis HAW-EB3 membrane-fusion protein-like protein YP_001471952.1 242600 R 425104 CDS YP_001471953.1 157373353 5612989 complement(244575..245153) 1 NC_009831.1 KEGG: slo:Shew_3536 hypothetical protein; hypothetical protein 245153 5612989 Ssed_0212 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471953.1 244575 R 425104 CDS YP_001471954.1 157373354 5613924 complement(245418..245819) 1 NC_009831.1 KEGG: slo:Shew_3537 hypothetical protein; hypothetical protein 245819 5613924 Ssed_0213 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471954.1 245418 R 425104 CDS YP_001471955.1 157373355 5613925 complement(245985..246410) 1 NC_009831.1 KEGG: sfr:Sfri_0591 hypothetical protein; hypothetical protein 246410 5613925 Ssed_0214 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471955.1 245985 R 425104 CDS YP_001471956.1 157373356 5613926 complement(246604..247095) 1 NC_009831.1 KEGG: slo:Shew_3539 hypothetical protein; hypothetical protein 247095 5613926 Ssed_0215 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471956.1 246604 R 425104 CDS YP_001471957.1 157373357 5613927 247524..248087 1 NC_009831.1 KEGG: saz:Sama_3471 tetraheme cytochrome c; tetraheme cytochrome c 248087 5613927 Ssed_0216 Shewanella sediminis HAW-EB3 tetraheme cytochrome c YP_001471957.1 247524 D 425104 CDS YP_001471958.1 157373358 5613302 complement(248722..249012) 1 NC_009831.1 KEGG: shn:Shewana3_3974 protein of unknown function DUF1145; hypothetical protein 249012 5613302 Ssed_0217 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471958.1 248722 R 425104 CDS YP_001471959.1 157373359 5613303 complement(249075..249656) 1 NC_009831.1 KEGG: shw:Sputw3181_3914 methyltransferase; methyltransferase 249656 5613303 Ssed_0218 Shewanella sediminis HAW-EB3 methyltransferase YP_001471959.1 249075 R 425104 CDS YP_001471960.1 157373360 5613304 250086..251708 1 NC_009831.1 KEGG: slo:Shew_3606 signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY 251708 5613304 Ssed_0219 Shewanella sediminis HAW-EB3 signal recognition particle-docking protein FtsY YP_001471960.1 250086 D 425104 CDS YP_001471961.1 157373361 5613305 251738..252430 1 NC_009831.1 KEGG: slo:Shew_3605 cell division ATP-binding protein FtsE; cell division ATP-binding protein FtsE 252430 5613305 Ssed_0220 Shewanella sediminis HAW-EB3 cell division ATP-binding protein FtsE YP_001471961.1 251738 D 425104 CDS YP_001471962.1 157373362 5613862 252433..253398 1 NC_009831.1 KEGG: slo:Shew_3604 protein of unknown function DUF214; hypothetical protein 253398 5613862 Ssed_0221 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471962.1 252433 D 425104 CDS YP_001471963.1 157373363 5613863 253663..254520 1 NC_009831.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 254520 5613863 Ssed_0222 Shewanella sediminis HAW-EB3 RNA polymerase factor sigma-32 YP_001471963.1 253663 D 425104 CDS YP_001471964.1 157373364 5613864 complement(254948..256462) 1 NC_009831.1 KEGG: shw:Sputw3181_3901 O-succinylbenzoate-CoA ligase; o-succinylbenzoate--CoA ligase 256462 5613864 Ssed_0223 Shewanella sediminis HAW-EB3 o-succinylbenzoate--CoA ligase YP_001471964.1 254948 R 425104 CDS YP_001471965.1 157373365 5613596 complement(256472..257527) 1 NC_009831.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 257527 5613596 Ssed_0224 Shewanella sediminis HAW-EB3 O-succinylbenzoate synthase YP_001471965.1 256472 R 425104 CDS YP_001471966.1 157373366 5613597 complement(257524..258306) 1 NC_009831.1 KEGG: slo:Shew_3600 alpha/beta hydrolase fold; alpha/beta hydrolase 258306 5613597 Ssed_0225 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001471966.1 257524 R 425104 CDS YP_001471967.1 157373367 5613598 complement(258306..260015) 1 NC_009831.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 260015 5613598 Ssed_0226 Shewanella sediminis HAW-EB3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_001471967.1 258306 R 425104 CDS YP_001471968.1 157373368 5613599 260780..261730 1 NC_009831.1 KEGG: sfr:Sfri_3686 cytochrome c family protein; cytochrome c family protein 261730 5613599 Ssed_0227 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001471968.1 260780 D 425104 CDS YP_001471969.1 157373369 5613469 261745..263754 1 NC_009831.1 KEGG: sfr:Sfri_3685 outer membrane protein; outer membrane protein 263754 5613469 Ssed_0228 Shewanella sediminis HAW-EB3 outer membrane protein YP_001471969.1 261745 D 425104 CDS YP_001471970.1 157373370 5613470 263789..266305 1 NC_009831.1 KEGG: spc:Sputcn32_0627 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; anaerobic dimethyl sulfoxide reductase subunit A 266305 5613470 Ssed_0229 Shewanella sediminis HAW-EB3 anaerobic dimethyl sulfoxide reductase subunit A YP_001471970.1 263789 D 425104 CDS YP_001471971.1 157373371 5613471 266320..266997 1 NC_009831.1 KEGG: son:SO1430 anaerobic dimethyl sulfoxide reductase, B subunit; anaerobic dimethylsulfoxide reductase subunit B 266997 5613471 Ssed_0230 Shewanella sediminis HAW-EB3 anaerobic dimethylsulfoxide reductase subunit B YP_001471971.1 266320 D 425104 CDS YP_001471972.1 157373372 5613632 267075..267734 1 NC_009831.1 KEGG: sfr:Sfri_3682 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 267734 5613632 Ssed_0231 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001471972.1 267075 D 425104 CDS YP_001471973.1 157373373 5613633 267775..268251 1 NC_009831.1 KEGG: sfr:Sfri_3125 hypothetical protein; hypothetical protein 268251 5613633 Ssed_0232 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471973.1 267775 D 425104 CDS YP_001471974.1 157373374 5613634 complement(268291..269031) 1 NC_009831.1 KEGG: son:SO1415 transcriptional regulator, TetR family; hypothetical protein 269031 5613634 Ssed_0233 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471974.1 268291 R 425104 CDS YP_001471975.1 157373375 5613635 269290..269898 1 NC_009831.1 KEGG: son:SO3871 thiol:disulfide interchange protein, DsbA family; DsbA family thiol:disulfide interchange protein 269898 5613635 Ssed_0234 Shewanella sediminis HAW-EB3 DsbA family thiol:disulfide interchange protein YP_001471975.1 269290 D 425104 CDS YP_001471976.1 157373376 5614067 269907..270542 1 NC_009831.1 KEGG: son:SO3870 disulfide bond formation protein; disulfide bond formation protein 270542 5614067 Ssed_0235 Shewanella sediminis HAW-EB3 disulfide bond formation protein YP_001471976.1 269907 D 425104 CDS YP_001471977.1 157373377 5614068 270603..271346 1 NC_009831.1 KEGG: vfi:VF0719 sugar hydrolase; hypothetical protein 271346 5614068 Ssed_0236 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471977.1 270603 D 425104 CDS YP_001471978.1 157373378 5614069 271380..273083 1 NC_009831.1 KEGG: son:SO3872 arylsulfate sulfotransferase; arylsulfate sulfotransferase 273083 5614069 Ssed_0237 Shewanella sediminis HAW-EB3 arylsulfate sulfotransferase YP_001471978.1 271380 D 425104 CDS YP_001471979.1 157373379 5614070 273869..274867 1 NC_009831.1 KEGG: saz:Sama_2899 transcriptional regulator-like protein; transcriptional regulator-like protein 274867 5614070 Ssed_0238 Shewanella sediminis HAW-EB3 transcriptional regulator-like protein YP_001471979.1 273869 D 425104 CDS YP_001471980.1 157373380 5614165 complement(275085..276050) 1 NC_009831.1 KEGG: shn:Shewana3_3964 transcriptional regulator, LysR family; LysR family transcriptional regulator 276050 5614165 Ssed_0239 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001471980.1 275085 R 425104 CDS YP_001471981.1 157373381 5614166 276582..277082 1 NC_009831.1 KEGG: slo:Shew_3155 hypothetical protein; hypothetical protein 277082 5614166 Ssed_0240 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471981.1 276582 D 425104 CDS YP_001471982.1 157373382 5614167 277170..277643 1 NC_009831.1 KEGG: saz:Sama_2902 hypothetical protein; hypothetical protein 277643 5614167 Ssed_0241 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471982.1 277170 D 425104 CDS YP_001471983.1 157373383 5614200 277659..278336 1 NC_009831.1 KEGG: she:Shewmr4_3763 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 278336 5614200 Ssed_0242 Shewanella sediminis HAW-EB3 twin-arginine translocation pathway signal YP_001471983.1 277659 D 425104 CDS YP_001471984.1 157373384 5614201 278333..279274 1 NC_009831.1 KEGG: slo:Shew_3158 polysulphide reductase, NrfD; polysulfide reductase NrfD 279274 5614201 Ssed_0243 Shewanella sediminis HAW-EB3 polysulfide reductase NrfD YP_001471984.1 278333 D 425104 CDS YP_001471985.1 157373385 5614202 279296..279586 1 NC_009831.1 KEGG: shw:Sputw3181_2184 hypothetical protein; hypothetical protein 279586 5614202 Ssed_0244 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471985.1 279296 D 425104 CDS YP_001471986.1 157373386 5614203 complement(279689..279826) 1 NC_009831.1 KEGG: slo:Shew_3598 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 279826 5614203 Ssed_0245 Shewanella sediminis HAW-EB3 AsnC family transcriptional regulator YP_001471986.1 279689 R 425104 CDS YP_001471987.1 157373387 5613541 280092..280697 1 NC_009831.1 KEGG: slo:Shew_3596 methyltransferase type 11; type 11 methyltransferase 280697 5613541 Ssed_0246 Shewanella sediminis HAW-EB3 type 11 methyltransferase YP_001471987.1 280092 D 425104 CDS YP_001471988.1 157373388 5613542 complement(280758..281210) 1 NC_009831.1 KEGG: shn:Shewana3_3955 protein of unknown function DUF1332; hypothetical protein 281210 5613542 Ssed_0247 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471988.1 280758 R 425104 CDS YP_001471989.1 157373389 5613543 complement(281329..281913) 1 NC_009831.1 KEGG: slo:Shew_3594 hypothetical protein; hypothetical protein 281913 5613543 Ssed_0248 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471989.1 281329 R 425104 CDS YP_001471990.1 157373390 5610435 282032..282748 1 NC_009831.1 KEGG: slo:Shew_3593 hypothetical protein; hypothetical protein 282748 5610435 Ssed_0249 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471990.1 282032 D 425104 CDS YP_001471991.1 157373391 5610436 282807..284225 1 NC_009831.1 KEGG: slo:Shew_3592 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 284225 5610436 Ssed_0250 Shewanella sediminis HAW-EB3 Sel1 domain-containing protein YP_001471991.1 282807 D 425104 CDS YP_001471992.1 157373392 5610437 284323..285573 1 NC_009831.1 KEGG: slo:Shew_3591 hypothetical protein; hypothetical protein 285573 5610437 Ssed_0251 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471992.1 284323 D 425104 CDS YP_001471993.1 157373393 5610438 complement(285705..286073) 1 NC_009831.1 KEGG: slo:Shew_3590 hypothetical protein; hypothetical protein 286073 5610438 Ssed_0252 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471993.1 285705 R 425104 CDS YP_001471994.1 157373394 5609692 complement(286268..287230) 1 NC_009831.1 KEGG: slo:Shew_3589 transcriptional regulator, LysR family; LysR family transcriptional regulator 287230 5609692 Ssed_0253 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001471994.1 286268 R 425104 CDS YP_001471995.1 157373395 5609693 287338..288540 1 NC_009831.1 KEGG: slo:Shew_3588 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 288540 5609693 Ssed_0254 Shewanella sediminis HAW-EB3 Bcr/CflA subfamily drug resistance transporter YP_001471995.1 287338 D 425104 CDS YP_001471996.1 157373396 5609694 complement(288663..289553) 1 NC_009831.1 KEGG: sbl:Sbal_0197 hypothetical protein; hypothetical protein 289553 5609694 Ssed_0255 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471996.1 288663 R 425104 CDS YP_001471997.1 157373397 5609695 289774..290367 1 NC_009831.1 KEGG: shn:Shewana3_3947 DTW domain containing protein; DTW domain-containing protein 290367 5609695 Ssed_0256 Shewanella sediminis HAW-EB3 DTW domain-containing protein YP_001471997.1 289774 D 425104 CDS YP_001471998.1 157373398 5610630 complement(290669..292780) 1 NC_009831.1 KEGG: slo:Shew_3585 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 292780 5610630 Ssed_0257 Shewanella sediminis HAW-EB3 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001471998.1 290669 R 425104 CDS YP_001471999.1 157373399 5610631 293104..293421 1 NC_009831.1 KEGG: slo:Shew_3584 hypothetical protein; hypothetical protein 293421 5610631 Ssed_0258 Shewanella sediminis HAW-EB3 hypothetical protein YP_001471999.1 293104 D 425104 CDS YP_001472000.1 157373400 5610632 293459..294094 1 NC_009831.1 KEGG: slo:Shew_3583 methyltransferase type 12; type 12 methyltransferase 294094 5610632 Ssed_0259 Shewanella sediminis HAW-EB3 type 12 methyltransferase YP_001472000.1 293459 D 425104 CDS YP_001472001.1 157373401 5613203 complement(294163..294876) 1 NC_009831.1 KEGG: slo:Shew_3582 hypothetical protein; hypothetical protein 294876 5613203 Ssed_0260 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472001.1 294163 R 425104 CDS YP_001472002.1 157373402 5613204 295106..296437 1 NC_009831.1 KEGG: slo:Shew_3581 peptidase M16 domain protein; peptidase M16 domain-containing protein 296437 5613204 Ssed_0261 Shewanella sediminis HAW-EB3 peptidase M16 domain-containing protein YP_001472002.1 295106 D 425104 CDS YP_001472003.1 157373403 5613205 296434..297876 1 NC_009831.1 KEGG: slo:Shew_3580 peptidase M16 domain protein; peptidase M16 domain-containing protein 297876 5613205 Ssed_0262 Shewanella sediminis HAW-EB3 peptidase M16 domain-containing protein YP_001472003.1 296434 D 425104 CDS YP_001472004.1 157373404 5613206 298019..298585 1 NC_009831.1 KEGG: saz:Sama_3442 conserved hypothetical protein; hypothetical protein 298585 5613206 Ssed_0263 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472004.1 298019 D 425104 CDS YP_001472005.1 157373405 5610487 298542..299078 1 NC_009831.1 KEGG: she:Shewmr4_3739 hypothetical protein; hypothetical protein 299078 5610487 Ssed_0264 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472005.1 298542 D 425104 CDS YP_001472006.1 157373406 5610488 complement(299126..299590) 1 NC_009831.1 KEGG: slo:Shew_3577 RNA methyltransferase, TrmH family, group 2; RNA methyltransferase 299590 5610488 Ssed_0265 Shewanella sediminis HAW-EB3 RNA methyltransferase YP_001472006.1 299126 R 425104 CDS YP_001472007.1 157373407 5610489 299843..300778 1 NC_009831.1 KEGG: ppr:PBPRA2008 transcriptional regulator, LysR family; LysR family transcriptional regulator 300778 5610489 Ssed_0266 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472007.1 299843 D 425104 CDS YP_001472008.1 157373408 5614219 complement(300775..301671) 1 NC_009831.1 KEGG: ppr:PBPRA2007 hypothetical pyruvate formate lyase activating enzyme; pyruvate formate lyase activating enzyme 301671 5614219 Ssed_0267 Shewanella sediminis HAW-EB3 pyruvate formate lyase activating enzyme YP_001472008.1 300775 R 425104 CDS YP_001472009.1 157373409 5614220 complement(301643..303196) 1 NC_009831.1 KEGG: son:SO2407 hypothetical protein; hypothetical protein 303196 5614220 Ssed_0268 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472009.1 301643 R 425104 CDS YP_001472010.1 157373410 5614221 complement(303447..304967) 1 NC_009831.1 KEGG: shm:Shewmr7_3772 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 304967 5614221 Ssed_0269 Shewanella sediminis HAW-EB3 aldehyde dehydrogenase YP_001472010.1 303447 R 425104 CDS YP_001472011.1 157373411 5614222 305272..307068 1 NC_009831.1 KEGG: shw:Sputw3181_0215 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 307068 5614222 Ssed_0270 Shewanella sediminis HAW-EB3 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001472011.1 305272 D 425104 CDS YP_001472012.1 157373412 5609626 307242..308222 1 NC_009831.1 KEGG: slo:Shew_3572 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 308222 5609626 Ssed_0271 Shewanella sediminis HAW-EB3 alcohol dehydrogenase YP_001472012.1 307242 D 425104 CDS YP_001472013.1 157373413 5609627 complement(308219..309136) 1 NC_009831.1 KEGG: vfi:VF0021 transcriptional regulators, LysR family; LysR family transcriptional regulator 309136 5609627 Ssed_0272 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472013.1 308219 R 425104 CDS YP_001472014.1 157373414 5609628 309405..310925 1 NC_009831.1 KEGG: shm:Shewmr7_2230 flavocytochrome c; flavocytochrome c 310925 5609628 Ssed_0273 Shewanella sediminis HAW-EB3 flavocytochrome c YP_001472014.1 309405 D 425104 CDS YP_001472015.1 157373415 5609629 310954..311307 1 NC_009831.1 KEGG: spc:Sputcn32_3535 tetraheme cytochrome c; tetraheme cytochrome c 311307 5609629 Ssed_0274 Shewanella sediminis HAW-EB3 tetraheme cytochrome c YP_001472015.1 310954 D 425104 CDS YP_001472016.1 157373416 5611298 311595..312758 1 NC_009831.1 KEGG: slo:Shew_1530 porin; porin 312758 5611298 Ssed_0275 Shewanella sediminis HAW-EB3 porin YP_001472016.1 311595 D 425104 CDS YP_001472017.1 157373417 5611299 complement(312872..313735) 1 NC_009831.1 KEGG: sfr:Sfri_3892 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 313735 5611299 Ssed_0276 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472017.1 312872 R 425104 CDS YP_001472018.1 157373418 5611300 313869..314513 1 NC_009831.1 KEGG: sbl:Sbal_0259 transcriptional regulator, TetR family; TetR family transcriptional regulator 314513 5611300 Ssed_0277 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001472018.1 313869 D 425104 CDS YP_001472019.1 157373419 5610577 complement(314510..315877) 1 NC_009831.1 KEGG: sbl:Sbal_0260 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 315877 5610577 Ssed_0278 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001472019.1 314510 R 425104 CDS YP_001472020.1 157373420 5610578 complement(315877..316560) 1 NC_009831.1 KEGG: slo:Shew_3570 two component transcriptional regulator, winged helix family; two component transcriptional regulator 316560 5610578 Ssed_0279 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001472020.1 315877 R 425104 CDS YP_001472021.1 157373421 5610579 316789..317295 1 NC_009831.1 KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related; hypothetical protein 317295 5610579 Ssed_0280 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472021.1 316789 D 425104 CDS YP_001472022.1 157373422 5610580 317399..318268 1 NC_009831.1 KEGG: slo:Shew_3568 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 318268 5610580 Ssed_0281 Shewanella sediminis HAW-EB3 cation diffusion facilitator family transporter YP_001472022.1 317399 D 425104 CDS YP_001472023.1 157373423 5611948 complement(331803..333218) 1 NC_009831.1 KEGG: shw:Sputw3181_0221 nitrogen metabolism transcriptional regulator, NtrC, fis family; nitrogen metabolism transcriptional regulator NtrC 333218 5611948 Ssed_0282 Shewanella sediminis HAW-EB3 nitrogen metabolism transcriptional regulator NtrC YP_001472023.1 331803 R 425104 CDS YP_001472024.1 157373424 5610444 complement(333272..334312) 1 NC_009831.1 KEGG: shw:Sputw3181_0222 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 334312 5610444 Ssed_0283 Shewanella sediminis HAW-EB3 signal transduction histidine kinase, nitrogen specific, NtrB YP_001472024.1 333272 R 425104 CDS YP_001472025.1 157373425 5610445 complement(334444..334980) 1 NC_009831.1 KEGG: slo:Shew_3559 hypothetical protein; hypothetical protein 334980 5610445 Ssed_0284 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472025.1 334444 R 425104 CDS YP_001472026.1 157373426 5612516 complement(335181..335858) 1 NC_009831.1 KEGG: sbl:Sbal_0270 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 335858 5612516 Ssed_0285 Shewanella sediminis HAW-EB3 ThiJ/PfpI domain-containing protein YP_001472026.1 335181 R 425104 CDS YP_001472027.1 157373427 5612517 complement(335941..337098) 1 NC_009831.1 KEGG: spc:Sputcn32_0377 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 337098 5612517 Ssed_0286 Shewanella sediminis HAW-EB3 iron-containing alcohol dehydrogenase YP_001472027.1 335941 R 425104 CDS YP_001472028.1 157373428 5612518 complement(337213..337815) 1 NC_009831.1 KEGG: shw:Sputw3181_0228 transcriptional regulator, TetR family; TetR family transcriptional regulator 337815 5612518 Ssed_0287 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001472028.1 337213 R 425104 CDS YP_001472029.1 157373429 5612519 complement(337975..338292) 1 NC_009831.1 hypothetical protein 338292 5612519 Ssed_0288 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472029.1 337975 R 425104 CDS YP_001472030.1 157373430 5611523 complement(338414..339613) 1 NC_009831.1 KEGG: shm:Shewmr7_3722 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 339613 5611523 Ssed_0289 Shewanella sediminis HAW-EB3 sodium:dicarboxylate symporter YP_001472030.1 338414 R 425104 CDS YP_001472031.1 157373431 5611524 complement(339691..342486) 1 NC_009831.1 KEGG: saz:Sama_0067 signal transduction histidine kinase-like protein protein; histidine kinase 342486 5611524 Ssed_0290 Shewanella sediminis HAW-EB3 histidine kinase YP_001472031.1 339691 R 425104 CDS YP_001472032.1 157373432 5611525 complement(342492..343454) 1 NC_009831.1 KEGG: slo:Shew_3789 ABC-type nitrate/sulfonate/bicarbonate transport system protein; ABC-type nitrate/sulfonate/bicarbonate transport system protein 343454 5611525 Ssed_0291 Shewanella sediminis HAW-EB3 ABC-type nitrate/sulfonate/bicarbonate transport system protein YP_001472032.1 342492 R 425104 CDS YP_001472033.1 157373433 5611526 complement(343643..345052) 1 NC_009831.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 345052 glnA 5611526 glnA Shewanella sediminis HAW-EB3 glutamine synthetase YP_001472033.1 343643 R 425104 CDS YP_001472034.1 157373434 5609853 345432..347255 1 NC_009831.1 KEGG: slo:Shew_3553 GTP-binding protein TypA; GTP-binding protein TypA 347255 5609853 Ssed_0293 Shewanella sediminis HAW-EB3 GTP-binding protein TypA YP_001472034.1 345432 D 425104 CDS YP_001472035.1 157373435 5609854 complement(347570..348784) 1 NC_009831.1 KEGG: slo:Shew_3549 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 348784 5609854 Ssed_0294 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001472035.1 347570 R 425104 CDS YP_001472036.1 157373436 5609855 complement(349069..349839) 1 NC_009831.1 KEGG: sat:SYN_00385 hypothetical protein; hypothetical protein 349839 5609855 Ssed_0295 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472036.1 349069 R 425104 CDS YP_001472037.1 157373437 5609748 complement(350171..351406) 1 NC_009831.1 KEGG: mem:Memar_0422 major facilitator superfamily MFS_1; arabinose efflux permease-like protein 351406 5609748 Ssed_0296 Shewanella sediminis HAW-EB3 arabinose efflux permease-like protein YP_001472037.1 350171 R 425104 CDS YP_001472038.1 157373438 5609749 complement(351507..351845) 1 NC_009831.1 KEGG: sfr:Sfri_2586 flavocytochrome c; flavocytochrome c 351845 5609749 Ssed_0297 Shewanella sediminis HAW-EB3 flavocytochrome c YP_001472038.1 351507 R 425104 CDS YP_001472039.1 157373439 5609750 complement(351912..353438) 1 NC_009831.1 KEGG: eca:ECA0910 flavoprotein subunit of a reductase; flavoprotein subunit of a reductase 353438 5609750 Ssed_0298 Shewanella sediminis HAW-EB3 flavoprotein subunit of a reductase YP_001472039.1 351912 R 425104 CDS YP_001472040.1 157373440 5609751 353807..355450 1 NC_009831.1 KEGG: mxa:MXAN_5879 sigma-54 dependent transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 355450 5609751 Ssed_0299 Shewanella sediminis HAW-EB3 sigma-54 dependent trancsriptional regulator YP_001472040.1 353807 D 425104 CDS YP_001472041.1 157373441 5610300 complement(355662..356309) 1 NC_009831.1 KEGG: sbl:Sbal_0313 hypothetical protein; hypothetical protein 356309 5610300 Ssed_0300 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472041.1 355662 R 425104 CDS YP_001472042.1 157373442 5610301 complement(356351..356578) 1 NC_009831.1 KEGG: slo:Shew_3546 hypothetical protein; hypothetical protein 356578 5610301 Ssed_0301 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472042.1 356351 R 425104 CDS YP_001472043.1 157373443 5610302 356728..357624 1 NC_009831.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN 357624 rbn 5610302 rbn Shewanella sediminis HAW-EB3 ribonuclease BN YP_001472043.1 356728 D 425104 CDS YP_001472044.1 157373444 5609864 357624..358577 1 NC_009831.1 KEGG: slo:Shew_3544 alpha/beta hydrolase fold; alpha/beta hydrolase 358577 5609864 Ssed_0303 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001472044.1 357624 D 425104 CDS YP_001472045.1 157373445 5609865 358574..359143 1 NC_009831.1 KEGG: sbl:Sbal_0317 hypothetical protein; hypothetical protein 359143 5609865 Ssed_0304 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472045.1 358574 D 425104 CDS YP_001472046.1 157373446 5609866 359212..359649 1 NC_009831.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 359649 5609866 Ssed_0305 Shewanella sediminis HAW-EB3 D-tyrosyl-tRNA(Tyr) deacylase YP_001472046.1 359212 D 425104 CDS YP_001472047.1 157373447 5609867 359652..360125 1 NC_009831.1 KEGG: slo:Shew_3541 thioesterase domain; thioesterase domain-containing protein 360125 5609867 Ssed_0306 Shewanella sediminis HAW-EB3 thioesterase domain-containing protein YP_001472047.1 359652 D 425104 CDS YP_001472048.1 157373448 5609999 360318..360911 1 NC_009831.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 360911 5609999 Ssed_0307 Shewanella sediminis HAW-EB3 azoreductase YP_001472048.1 360318 D 425104 CDS YP_001472049.1 157373449 5610000 complement(361077..361397) 1 NC_009831.1 KEGG: sbl:Sbal_0322 rhodanese domain protein; rhodanese domain-containing protein 361397 5610000 Ssed_0308 Shewanella sediminis HAW-EB3 rhodanese domain-containing protein YP_001472049.1 361077 R 425104 CDS YP_001472050.1 157373450 5610001 complement(361522..362268) 1 NC_009831.1 KEGG: shw:Sputw3181_0284 hypothetical protein; hypothetical protein 362268 5610001 Ssed_0309 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472050.1 361522 R 425104 CDS YP_001472051.1 157373451 5610002 complement(362282..363529) 1 NC_009831.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 363529 5610002 Ssed_0310 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP synthase YP_001472051.1 362282 R 425104 CDS YP_001472052.1 157373452 5610046 complement(363567..364292) 1 NC_009831.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 364292 fabG 5610046 fabG Shewanella sediminis HAW-EB3 3-ketoacyl-ACP reductase YP_001472052.1 363567 R 425104 CDS YP_001472053.1 157373453 5610047 complement(364299..364787) 1 NC_009831.1 KEGG: slo:Shew_3524 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 364787 5610047 Ssed_0312 Shewanella sediminis HAW-EB3 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_001472053.1 364299 R 425104 CDS YP_001472054.1 157373454 5610048 complement(364784..365989) 1 NC_009831.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 365989 5610048 Ssed_0313 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP synthase YP_001472054.1 364784 R 425104 CDS YP_001472055.1 157373455 5609778 complement(366060..366692) 1 NC_009831.1 KEGG: slo:Shew_3522 hypothetical protein; hypothetical protein 366692 5609778 Ssed_0314 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472055.1 366060 R 425104 CDS YP_001472056.1 157373456 5609779 complement(366721..367983) 1 NC_009831.1 KEGG: slo:Shew_3521 tryptophan halogenase; tryptophan halogenase 367983 5609779 Ssed_0315 Shewanella sediminis HAW-EB3 tryptophan halogenase YP_001472056.1 366721 R 425104 CDS YP_001472057.1 157373457 5609780 complement(367983..370397) 1 NC_009831.1 KEGG: shm:Shewmr7_3685 hypothetical protein; hypothetical protein 370397 5609780 Ssed_0316 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472057.1 367983 R 425104 CDS YP_001472058.1 157373458 5609781 complement(370394..371197) 1 NC_009831.1 KEGG: shm:Shewmr7_3684 hypothetical protein; hypothetical protein 371197 5609781 Ssed_0317 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472058.1 370394 R 425104 CDS YP_001472059.1 157373459 5609718 complement(371194..371673) 1 NC_009831.1 KEGG: slo:Shew_3518 thioesterase superfamily protein; thioesterase superfamily protein 371673 5609718 Ssed_0318 Shewanella sediminis HAW-EB3 thioesterase superfamily protein YP_001472059.1 371194 R 425104 CDS YP_001472060.1 157373460 5609719 complement(371673..373232) 1 NC_009831.1 KEGG: slo:Shew_3517 histidine ammonia-lyase; histidine ammonia-lyase 373232 5609719 Ssed_0319 Shewanella sediminis HAW-EB3 histidine ammonia-lyase YP_001472060.1 371673 R 425104 CDS YP_001472061.1 157373461 5609720 complement(373233..374936) 1 NC_009831.1 KEGG: slo:Shew_3516 glycosyl transferase, family 2; glycosyl transferase family protein 374936 5609720 Ssed_0320 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001472061.1 373233 R 425104 CDS YP_001472062.1 157373462 5609587 complement(374936..375313) 1 NC_009831.1 KEGG: shn:Shewana3_0337 thioester dehydrase family protein; thioester dehydrase family protein 375313 5609587 Ssed_0321 Shewanella sediminis HAW-EB3 thioester dehydrase family protein YP_001472062.1 374936 R 425104 CDS YP_001472063.1 157373463 5609588 complement(375306..376670) 1 NC_009831.1 KEGG: slo:Shew_3514 hypothetical protein; hypothetical protein 376670 5609588 Ssed_0322 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472063.1 375306 R 425104 CDS YP_001472064.1 157373464 5609589 complement(376667..377215) 1 NC_009831.1 KEGG: slo:Shew_3513 hypothetical protein; hypothetical protein 377215 5609589 Ssed_0323 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472064.1 376667 R 425104 CDS YP_001472065.1 157373465 5609590 complement(377215..377463) 1 NC_009831.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 377463 5609590 Ssed_0324 Shewanella sediminis HAW-EB3 acyl carrier protein YP_001472065.1 377215 R 425104 CDS YP_001472066.1 157373466 5610065 complement(377472..377726) 1 NC_009831.1 KEGG: shn:Shewana3_0344 acyl carrier protein; acyl carrier protein 377726 5610065 Ssed_0325 Shewanella sediminis HAW-EB3 acyl carrier protein YP_001472066.1 377472 R 425104 CDS YP_001472067.1 157373467 5610066 complement(377730..378521) 1 NC_009831.1 KEGG: slo:Shew_3510 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 378521 5610066 Ssed_0326 Shewanella sediminis HAW-EB3 phospholipid/glycerol acyltransferase YP_001472067.1 377730 R 425104 CDS YP_001472068.1 157373468 5610067 complement(378514..379230) 1 NC_009831.1 KEGG: son:SO4366 hypothetical protein; hypothetical protein 379230 5610067 Ssed_0327 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472068.1 378514 R 425104 CDS YP_001472069.1 157373469 5610068 complement(379475..380344) 1 NC_009831.1 KEGG: slo:Shew_3508 hypothetical protein; hypothetical protein 380344 5610068 Ssed_0328 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472069.1 379475 R 425104 CDS YP_001472070.1 157373470 5610025 complement(380531..382606) 1 NC_009831.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 382606 5610025 Ssed_0329 Shewanella sediminis HAW-EB3 ATP-dependent DNA helicase RecG YP_001472070.1 380531 R 425104 CDS YP_001472071.1 157373471 5610026 complement(382787..383719) 1 NC_009831.1 KEGG: sbl:Sbal_0350 Na+/Ca+ antiporter, CaCA family; CaCA family Na(+)/Ca(+) antiporter 383719 5610026 Ssed_0330 Shewanella sediminis HAW-EB3 CaCA family Na(+)/Ca(+) antiporter YP_001472071.1 382787 R 425104 CDS YP_001472072.1 157373472 5610027 complement(383891..385558) 1 NC_009831.1 KEGG: slo:Shew_3502 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 385558 5610027 Ssed_0331 Shewanella sediminis HAW-EB3 AMP-dependent synthetase/ligase YP_001472072.1 383891 R 425104 CDS YP_001472073.1 157373473 5609683 complement(385804..386499) 1 NC_009831.1 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 386499 5609683 Ssed_0332 Shewanella sediminis HAW-EB3 tRNA guanosine-2'-O-methyltransferase YP_001472073.1 385804 R 425104 CDS YP_001472074.1 157373474 5609684 complement(386567..386950) 1 NC_009831.1 KEGG: slo:Shew_3500 endoribonuclease L-PSP; endoribonuclease L-PSP 386950 5609684 Ssed_0333 Shewanella sediminis HAW-EB3 endoribonuclease L-PSP YP_001472074.1 386567 R 425104 CDS YP_001472075.1 157373475 5609685 complement(387040..389145) 1 NC_009831.1 KEGG: slo:Shew_3499 (p)ppGpp synthetase I, SpoT/RelA; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 389145 5609685 Ssed_0334 Shewanella sediminis HAW-EB3 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_001472075.1 387040 R 425104 CDS YP_001472076.1 157373476 5609686 complement(389159..389443) 1 NC_009831.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 389443 rpoZ 5609686 rpoZ Shewanella sediminis HAW-EB3 DNA-directed RNA polymerase subunit omega YP_001472076.1 389159 R 425104 CDS YP_001472077.1 157373477 5610920 complement(389500..390123) 1 NC_009831.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 390123 gmk 5610920 gmk Shewanella sediminis HAW-EB3 guanylate kinase YP_001472077.1 389500 R 425104 CDS YP_001472078.1 157373478 5610921 390490..391557 1 NC_009831.1 KEGG: slo:Shew_3496 hypothetical protein; hypothetical protein 391557 5610921 Ssed_0337 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472078.1 390490 D 425104 CDS YP_001472079.1 157373479 5610922 391663..392631 1 NC_009831.1 KEGG: shm:Shewmr7_0332 hypothetical protein; hypothetical protein 392631 5610922 Ssed_0338 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472079.1 391663 D 425104 CDS YP_001472080.1 157373480 5611448 392628..393704 1 NC_009831.1 KEGG: shn:Shewana3_3807 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 393704 5611448 Ssed_0339 Shewanella sediminis HAW-EB3 aminoglycoside phosphotransferase YP_001472080.1 392628 D 425104 CDS YP_001472081.1 157373481 5611449 complement(394139..395614) 1 NC_009831.1 KEGG: vvy:VVA1406 hypothetical protein; hypothetical protein 395614 5611449 Ssed_0340 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472081.1 394139 R 425104 CDS YP_001472082.1 157373482 5611450 395907..396092 1 NC_009831.1 hypothetical protein 396092 5611450 Ssed_0341 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472082.1 395907 D 425104 CDS YP_001472083.1 157373483 5611451 complement(396516..396896) 1 NC_009831.1 KEGG: slo:Shew_2279 tetraheme cytochrome c; tetraheme cytochrome c 396896 5611451 Ssed_0342 Shewanella sediminis HAW-EB3 tetraheme cytochrome c YP_001472083.1 396516 R 425104 CDS YP_001472084.1 157373484 5613894 complement(396941..398584) 1 NC_009831.1 KEGG: slo:Shew_2280 phenylalanine/histidine ammonia-lyase; phenylalanine/histidine ammonia-lyase 398584 5613894 Ssed_0343 Shewanella sediminis HAW-EB3 phenylalanine/histidine ammonia-lyase YP_001472084.1 396941 R 425104 CDS YP_001472085.1 157373485 5613895 complement(398611..400170) 1 NC_009831.1 KEGG: son:SO3058 flavocytochrome c flavin subunit; flavocytochrome c flavin subunit 400170 5613895 Ssed_0344 Shewanella sediminis HAW-EB3 flavocytochrome c flavin subunit YP_001472085.1 398611 R 425104 CDS YP_001472086.1 157373486 5613896 complement(400647..401804) 1 NC_009831.1 KEGG: slo:Shew_0274 hypothetical protein; hypothetical protein 401804 5613896 Ssed_0345 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472086.1 400647 R 425104 CDS YP_001472087.1 157373487 5613897 402419..403975 1 NC_009831.1 KEGG: son:SO3059 formate hydrogenlyase transcriptional activator; formate hydrogenlyase transcriptional activator 403975 5613897 Ssed_0346 Shewanella sediminis HAW-EB3 formate hydrogenlyase transcriptional activator YP_001472087.1 402419 D 425104 CDS YP_001472088.1 157373488 5610808 complement(403972..404430) 1 NC_009831.1 KEGG: sfr:Sfri_3125 hypothetical protein; hypothetical protein 404430 5610808 Ssed_0347 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472088.1 403972 R 425104 CDS YP_001472089.1 157373489 5610809 complement(404461..405120) 1 NC_009831.1 KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 405120 5610809 Ssed_0348 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001472089.1 404461 R 425104 CDS YP_001472090.1 157373490 5610810 complement(405205..405840) 1 NC_009831.1 KEGG: sfr:Sfri_3127 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 405840 5610810 Ssed_0349 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001472090.1 405205 R 425104 CDS YP_001472091.1 157373491 5612886 complement(405853..408282) 1 NC_009831.1 KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; anaerobic dimethyl sulfoxide reductase subunit A 408282 5612886 Ssed_0350 Shewanella sediminis HAW-EB3 anaerobic dimethyl sulfoxide reductase subunit A YP_001472091.1 405853 R 425104 CDS YP_001472092.1 157373492 5612887 complement(408323..410329) 1 NC_009831.1 KEGG: sfr:Sfri_3129 outer membrane protein; outer membrane protein 410329 5612887 Ssed_0351 Shewanella sediminis HAW-EB3 outer membrane protein YP_001472092.1 408323 R 425104 CDS YP_001472093.1 157373493 5612888 complement(410345..411298) 1 NC_009831.1 KEGG: sfr:Sfri_3130 cytochrome c family protein; cytochrome c family protein 411298 5612888 Ssed_0352 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001472093.1 410345 R 425104 CDS YP_001472094.1 157373494 5612889 complement(412077..413807) 1 NC_009831.1 KEGG: psp:PSPPH_1251 oligopeptide transporter, OPT family; OPT family oligopeptide transporter 413807 5612889 Ssed_0353 Shewanella sediminis HAW-EB3 OPT family oligopeptide transporter YP_001472094.1 412077 R 425104 CDS YP_001472095.1 157373495 5612635 414104..414796 1 NC_009831.1 KEGG: slo:Shew_0277 transcriptional regulator, TetR family; hypothetical protein 414796 5612635 Ssed_0354 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472095.1 414104 D 425104 CDS YP_001472096.1 157373496 5612636 complement(414994..415314) 1 NC_009831.1 hypothetical protein 415314 5612636 Ssed_0355 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472096.1 414994 R 425104 CDS YP_001472097.1 157373497 5612637 complement(415350..415970) 1 NC_009831.1 KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 415970 5612637 Ssed_0356 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001472097.1 415350 R 425104 CDS YP_001472098.1 157373498 5612638 complement(416026..418128) 1 NC_009831.1 KEGG: son:SO4356 hypothetical protein; hypothetical protein 418128 5612638 Ssed_0357 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472098.1 416026 R 425104 CDS YP_001472099.1 157373499 5613329 complement(418130..418747) 1 NC_009831.1 KEGG: vpa:VP1448 anaerobic dimethyl sulfoxide reductase, subunit B; anaerobic dimethyl sulfoxide reductase subunit B 418747 5613329 Ssed_0358 Shewanella sediminis HAW-EB3 anaerobic dimethyl sulfoxide reductase subunit B YP_001472099.1 418130 R 425104 CDS YP_001472100.1 157373500 5613330 complement(418758..421208) 1 NC_009831.1 KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; anaerobic dimethyl sulfoxide reductase subunit A 421208 5613330 Ssed_0359 Shewanella sediminis HAW-EB3 anaerobic dimethyl sulfoxide reductase subunit A YP_001472100.1 418758 R 425104 CDS YP_001472101.1 157373501 5613331 complement(421242..422939) 1 NC_009831.1 KEGG: sfr:Sfri_3685 outer membrane protein; hypothetical protein 422939 5613331 Ssed_0360 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472101.1 421242 R 425104 CDS YP_001472102.1 157373502 5612050 complement(422949..423809) 1 NC_009831.1 KEGG: son:SO1777 decaheme cytochrome c MtrA; decaheme cytochrome c MtrA 423809 5612050 Ssed_0361 Shewanella sediminis HAW-EB3 decaheme cytochrome c MtrA YP_001472102.1 422949 R 425104 CDS YP_001472103.1 157373503 5612051 complement(424401..425414) 1 NC_009831.1 KEGG: sfr:Sfri_3878 integrase, catalytic region; integrase, catalytic region 425414 5612051 Ssed_0362 Shewanella sediminis HAW-EB3 integrase, catalytic region YP_001472103.1 424401 R 425104 CDS YP_001472104.1 157373504 5612052 complement(425452..427050) 1 NC_009831.1 KEGG: sfr:Sfri_3879 sodium/sulphate symporter; sodium/sulfate symporter 427050 5612052 Ssed_0363 Shewanella sediminis HAW-EB3 sodium/sulfate symporter YP_001472104.1 425452 R 425104 CDS YP_001472105.1 157373505 5612053 427389..428024 1 NC_009831.1 KEGG: sfr:Sfri_3880 hypothetical protein; hypothetical protein 428024 5612053 Ssed_0364 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472105.1 427389 D 425104 CDS YP_001472106.1 157373506 5613411 428039..428509 1 NC_009831.1 KEGG: sfr:Sfri_3881 adenylate cyclase; adenylate cyclase 428509 5613411 Ssed_0365 Shewanella sediminis HAW-EB3 adenylate cyclase YP_001472106.1 428039 D 425104 CDS YP_001472107.1 157373507 5613412 428526..429851 1 NC_009831.1 KEGG: ppr:PBPRA2016 hypothetical protein; hypothetical protein 429851 5613412 Ssed_0366 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472107.1 428526 D 425104 CDS YP_001472108.1 157373508 5613413 430127..431479 1 NC_009831.1 KEGG: sfr:Sfri_3882 phosphate-selective porin O and P; phosphate-selective porin O and P 431479 5613413 Ssed_0367 Shewanella sediminis HAW-EB3 phosphate-selective porin O and P YP_001472108.1 430127 D 425104 CDS YP_001472109.1 157373509 5613268 431489..432313 1 NC_009831.1 KEGG: sfr:Sfri_3883 hypothetical protein; hypothetical protein 432313 5613268 Ssed_0368 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472109.1 431489 D 425104 CDS YP_001472110.1 157373510 5613269 432396..433064 1 NC_009831.1 KEGG: sfr:Sfri_3884 protein of unknown function DUF47; hypothetical protein 433064 5613269 Ssed_0369 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472110.1 432396 D 425104 CDS YP_001472111.1 157373511 5613270 433077..434120 1 NC_009831.1 KEGG: sfr:Sfri_3885 phosphate transporter; phosphate transporter 434120 5613270 Ssed_0370 Shewanella sediminis HAW-EB3 phosphate transporter YP_001472111.1 433077 D 425104 CDS YP_001472112.1 157373512 5613271 435056..436882 1 NC_009831.1 KEGG: sfr:Sfri_3883 hypothetical protein; hypothetical protein 436882 5613271 Ssed_0371 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472112.1 435056 D 425104 CDS YP_001472113.1 157373513 5613032 437011..438036 1 NC_009831.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 438036 5613032 Ssed_0372 Shewanella sediminis HAW-EB3 manganese-dependent inorganic pyrophosphatase YP_001472113.1 437011 D 425104 CDS YP_001472114.1 157373514 5613033 438266..438928 1 NC_009831.1 KEGG: slo:Shew_2230 adenylate kinase; adenylate kinase 438928 5613033 Ssed_0373 Shewanella sediminis HAW-EB3 adenylate kinase YP_001472114.1 438266 D 425104 CDS YP_001472115.1 157373515 5613034 complement(439043..439681) 1 NC_009831.1 KEGG: spc:Sputcn32_3619 ERCC4 domain protein; ERCC4 domain-containing protein 439681 5613034 Ssed_0374 Shewanella sediminis HAW-EB3 ERCC4 domain-containing protein YP_001472115.1 439043 R 425104 CDS YP_001472116.1 157373516 5613035 complement(439843..441147) 1 NC_009831.1 KEGG: she:Shewmr4_3395 HipA domain protein; HipA domain-containing protein 441147 5613035 Ssed_0375 Shewanella sediminis HAW-EB3 HipA domain-containing protein YP_001472116.1 439843 R 425104 CDS YP_001472117.1 157373517 5613261 complement(441134..441382) 1 NC_009831.1 KEGG: slo:Shew_0478 transcriptional regulator, XRE family; XRE family transcriptional regulator 441382 5613261 Ssed_0376 Shewanella sediminis HAW-EB3 XRE family transcriptional regulator YP_001472117.1 441134 R 425104 CDS YP_001472118.1 157373518 5613262 complement(441797..442660) 1 NC_009831.1 KEGG: slo:Shew_3489 YicC N-terminal domain protein; hypothetical protein 442660 5613262 Ssed_0377 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472118.1 441797 R 425104 CDS YP_001472119.1 157373519 5613263 442841..443554 1 NC_009831.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 443554 rph 5613263 rph Shewanella sediminis HAW-EB3 ribonuclease PH YP_001472119.1 442841 D 425104 CDS YP_001472120.1 157373520 5612972 443641..444282 1 NC_009831.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 444282 pyrE 5612972 pyrE Shewanella sediminis HAW-EB3 orotate phosphoribosyltransferase YP_001472120.1 443641 D 425104 CDS YP_001472121.1 157373521 5612973 complement(444582..445241) 1 NC_009831.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 445241 folE 5612973 folE Shewanella sediminis HAW-EB3 GTP cyclohydrolase I YP_001472121.1 444582 R 425104 CDS YP_001472122.1 157373522 5612974 complement(445480..447444) 1 NC_009831.1 KEGG: slo:Shew_3485 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 447444 5612974 Ssed_0381 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001472122.1 445480 R 425104 CDS YP_001472123.1 157373523 5612975 complement(447863..448456) 1 NC_009831.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 448456 slmA 5612975 slmA Shewanella sediminis HAW-EB3 nucleoid occlusion protein YP_001472123.1 447863 R 425104 CDS YP_001472124.1 157373524 5612711 complement(448601..449059) 1 NC_009831.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 449059 dut 5612711 dut Shewanella sediminis HAW-EB3 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001472124.1 448601 R 425104 CDS YP_001472125.1 157373525 5612712 complement(449056..450258) 1 NC_009831.1 KEGG: slo:Shew_3482 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phosphopantothenoylcysteine decarboxylase, phosphopantothenate--cysteine ligase 450258 5612712 Ssed_0384 Shewanella sediminis HAW-EB3 phosphopantothenoylcysteine decarboxylase, phosphopantothenate--cysteine ligase YP_001472125.1 449056 R 425104 CDS YP_001472126.1 157373526 5612713 450403..451080 1 NC_009831.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 451080 radC 5612713 radC Shewanella sediminis HAW-EB3 DNA repair protein RadC YP_001472126.1 450403 D 425104 CDS YP_001472127.1 157373527 5612747 451208..451444 1 NC_009831.1 required for 70S ribosome assembly; 50S ribosomal protein L28 451444 rpmB 5612747 rpmB Shewanella sediminis HAW-EB3 50S ribosomal protein L28 YP_001472127.1 451208 D 425104 CDS YP_001472128.1 157373528 5612748 451451..451624 1 NC_009831.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 451624 rpmG 5612748 rpmG Shewanella sediminis HAW-EB3 50S ribosomal protein L33 YP_001472128.1 451451 D 425104 CDS YP_001472129.1 157373529 5612749 451913..453232 1 NC_009831.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 453232 5612749 Ssed_0388 Shewanella sediminis HAW-EB3 N-acetylglutamate synthase YP_001472129.1 451913 D 425104 CDS YP_001472130.1 157373530 5612750 complement(453603..454499) 1 NC_009831.1 KEGG: son:SO4243 rarD protein; rarD protein 454499 5612750 Ssed_0389 Shewanella sediminis HAW-EB3 rarD protein YP_001472130.1 453603 R 425104 CDS YP_001472131.1 157373531 5612530 complement(454745..455209) 1 NC_009831.1 KEGG: shw:Sputw3181_0371 uncharacterized domain 1; hypothetical protein 455209 5612530 Ssed_0390 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472131.1 454745 R 425104 CDS YP_001472132.1 157373532 5612531 455509..457332 1 NC_009831.1 KEGG: slo:Shew_3474 ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase RecQ 457332 5612531 Ssed_0391 Shewanella sediminis HAW-EB3 ATP-dependent DNA helicase RecQ YP_001472132.1 455509 D 425104 CDS YP_001472133.1 157373533 5612532 complement(457338..459089) 1 NC_009831.1 KEGG: slo:Shew_3473 response regulator receiver protein; response regulator receiver protein 459089 5612532 Ssed_0392 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001472133.1 457338 R 425104 CDS YP_001472134.1 157373534 5612533 459605..461176 1 NC_009831.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 461176 5612533 Ssed_0393 Shewanella sediminis HAW-EB3 2-isopropylmalate synthase YP_001472134.1 459605 D 425104 CDS YP_001472135.1 157373535 5612669 461233..462327 1 NC_009831.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 462327 5612669 Ssed_0394 Shewanella sediminis HAW-EB3 3-isopropylmalate dehydrogenase YP_001472135.1 461233 D 425104 CDS YP_001472136.1 157373536 5612670 462332..463732 1 NC_009831.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 463732 5612670 Ssed_0395 Shewanella sediminis HAW-EB3 isopropylmalate isomerase large subunit YP_001472136.1 462332 D 425104 CDS YP_001472137.1 157373537 5612671 463746..464351 1 NC_009831.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 464351 leuD 5612671 leuD Shewanella sediminis HAW-EB3 isopropylmalate isomerase small subunit YP_001472137.1 463746 D 425104 CDS YP_001472138.1 157373538 5612392 464841..466178 1 NC_009831.1 KEGG: son:SO4232 long-chain fatty acid transport protein; long-chain fatty acid transport protein 466178 5612392 Ssed_0397 Shewanella sediminis HAW-EB3 long-chain fatty acid transport protein YP_001472138.1 464841 D 425104 CDS YP_001472139.1 157373539 5612393 466420..466917 1 NC_009831.1 KEGG: slo:Shew_3467 hypothetical protein; hypothetical protein 466917 5612393 Ssed_0398 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472139.1 466420 D 425104 CDS YP_001472140.1 157373540 5612394 466976..468463 1 NC_009831.1 KEGG: slo:Shew_3466 glycerol kinase; glycerol kinase 468463 5612394 Ssed_0399 Shewanella sediminis HAW-EB3 glycerol kinase YP_001472140.1 466976 D 425104 CDS YP_001472141.1 157373541 5612395 complement(468533..468835) 1 NC_009831.1 KEGG: slo:Shew_3465 hypothetical protein; hypothetical protein 468835 5612395 Ssed_0400 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472141.1 468533 R 425104 CDS YP_001472142.1 157373542 5612161 469277..469735 1 NC_009831.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 469735 5612161 Ssed_0401 Shewanella sediminis HAW-EB3 cell division protein MraZ YP_001472142.1 469277 D 425104 CDS YP_001472143.1 157373543 5612162 469763..470707 1 NC_009831.1 KEGG: slo:Shew_3461 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 470707 mraW 5612162 mraW Shewanella sediminis HAW-EB3 S-adenosyl-methyltransferase MraW YP_001472143.1 469763 D 425104 CDS YP_001472144.1 157373544 5612163 470784..471098 1 NC_009831.1 KEGG: slo:Shew_3460 cell division protein FtsL; cell division protein FtsL 471098 5612163 Ssed_0403 Shewanella sediminis HAW-EB3 cell division protein FtsL YP_001472144.1 470784 D 425104 CDS YP_001472145.1 157373545 5612164 471175..472911 1 NC_009831.1 KEGG: slo:Shew_3459 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 472911 5612164 Ssed_0404 Shewanella sediminis HAW-EB3 peptidoglycan glycosyltransferase YP_001472145.1 471175 D 425104 CDS YP_001472146.1 157373546 5612354 472911..474392 1 NC_009831.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 474392 murE 5612354 murE Shewanella sediminis HAW-EB3 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001472146.1 472911 D 425104 CDS YP_001472147.1 157373547 5612355 474389..475756 1 NC_009831.1 KEGG: slo:Shew_3457 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase 475756 5612355 Ssed_0406 Shewanella sediminis HAW-EB3 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001472147.1 474389 D 425104 CDS YP_001472148.1 157373548 5612356 475756..476838 1 NC_009831.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 476838 mraY 5612356 mraY Shewanella sediminis HAW-EB3 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001472148.1 475756 D 425104 CDS YP_001472149.1 157373549 5611428 476911..478242 1 NC_009831.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 478242 murD 5611428 murD Shewanella sediminis HAW-EB3 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001472149.1 476911 D 425104 CDS YP_001472150.1 157373550 5611429 478235..479467 1 NC_009831.1 KEGG: slo:Shew_3454 cell division protein FtsW; cell division protein FtsW 479467 5611429 Ssed_0409 Shewanella sediminis HAW-EB3 cell division protein FtsW YP_001472150.1 478235 D 425104 CDS YP_001472151.1 157373551 5611430 479448..480545 1 NC_009831.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 480545 murG 5611430 murG Shewanella sediminis HAW-EB3 UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001472151.1 479448 D 425104 CDS YP_001472152.1 157373552 5611431 480547..482016 1 NC_009831.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 482016 murC 5611431 murC Shewanella sediminis HAW-EB3 UDP-N-acetylmuramate--L-alanine ligase YP_001472152.1 480547 D 425104 CDS YP_001472153.1 157373553 5613654 482148..482912 1 NC_009831.1 KEGG: slo:Shew_3451 polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 482912 5613654 Ssed_0412 Shewanella sediminis HAW-EB3 polypeptide-transport-associated domain-containing protein YP_001472153.1 482148 D 425104 CDS YP_001472154.1 157373554 5613655 482916..484151 1 NC_009831.1 KEGG: slo:Shew_3450 cell division protein FtsA; cell division protein FtsA 484151 5613655 Ssed_0413 Shewanella sediminis HAW-EB3 cell division protein FtsA YP_001472154.1 482916 D 425104 CDS YP_001472155.1 157373555 5613656 484228..485403 1 NC_009831.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 485403 5613656 Ssed_0414 Shewanella sediminis HAW-EB3 cell division protein FtsZ YP_001472155.1 484228 D 425104 CDS YP_001472156.1 157373556 5611027 485604..486524 1 NC_009831.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 486524 lpxC 5611027 lpxC Shewanella sediminis HAW-EB3 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001472156.1 485604 D 425104 CDS YP_001472157.1 157373557 5611028 complement(486566..487018) 1 NC_009831.1 KEGG: slo:Shew_3447 hypothetical protein; hypothetical protein 487018 5611028 Ssed_0416 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472157.1 486566 R 425104 CDS YP_001472158.1 157373558 5611029 487046..487945 1 NC_009831.1 KEGG: slo:Shew_3446 peptidase M23B; peptidase M23B 487945 5611029 Ssed_0417 Shewanella sediminis HAW-EB3 peptidase M23B YP_001472158.1 487046 D 425104 CDS YP_001472159.1 157373559 5611030 488005..490728 1 NC_009831.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 490728 5611030 Ssed_0418 Shewanella sediminis HAW-EB3 preprotein translocase subunit SecA YP_001472159.1 488005 D 425104 CDS YP_001472160.1 157373560 5611672 complement(512380..512769) 1 NC_009831.1 KEGG: slo:Shew_3444 mutator MutT protein; mutator MutT protein 512769 5611672 Ssed_0419 Shewanella sediminis HAW-EB3 mutator MutT protein YP_001472160.1 512380 R 425104 CDS YP_001472161.1 157373561 5614109 complement(512773..512985) 1 NC_009831.1 KEGG: slo:Shew_3443 protein of unknown function DUF329; hypothetical protein 512985 5614109 Ssed_0420 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472161.1 512773 R 425104 CDS YP_001472162.1 157373562 5614110 complement(513065..513799) 1 NC_009831.1 KEGG: slo:Shew_3442 protein of unknown function DUF1342; hypothetical protein 513799 5614110 Ssed_0421 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472162.1 513065 R 425104 CDS YP_001472163.1 157373563 5614111 complement(513808..514413) 1 NC_009831.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 514413 coaE 5614111 coaE Shewanella sediminis HAW-EB3 dephospho-CoA kinase YP_001472163.1 513808 R 425104 CDS YP_001472164.1 157373564 5611220 complement(514459..515370) 1 NC_009831.1 KEGG: shn:Shewana3_0417 peptidase A24A domain protein; prepilin peptidase 515370 5611220 Ssed_0423 Shewanella sediminis HAW-EB3 prepilin peptidase YP_001472164.1 514459 R 425104 CDS YP_001472165.1 157373565 5611221 complement(515443..516708) 1 NC_009831.1 KEGG: slo:Shew_3439 type II secretion system protein; type II secretion system protein 516708 5611221 Ssed_0424 Shewanella sediminis HAW-EB3 type II secretion system protein YP_001472165.1 515443 R 425104 CDS YP_001472166.1 157373566 5611222 complement(516774..518483) 1 NC_009831.1 KEGG: slo:Shew_3438 type IV-A pilus assembly ATPase PilB; type IV-A pilus assembly ATPase PilB 518483 5611222 Ssed_0425 Shewanella sediminis HAW-EB3 type IV-A pilus assembly ATPase PilB YP_001472166.1 516774 R 425104 CDS YP_001472167.1 157373567 5613715 complement(518556..518966) 1 NC_009831.1 KEGG: sfr:Sfri_3782 methylation site containing protein; methylation site containing protein 518966 5613715 Ssed_0426 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001472167.1 518556 R 425104 CDS YP_001472168.1 157373568 5613716 complement(519719..520624) 1 NC_009831.1 KEGG: shw:Sputw3181_0522 nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide diphosphorylase 520624 5613716 Ssed_0427 Shewanella sediminis HAW-EB3 nicotinate-nucleotide diphosphorylase YP_001472168.1 519719 R 425104 CDS YP_001472169.1 157373569 5613717 520949..521566 1 NC_009831.1 KEGG: slo:Shew_3434 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; N-acetyl-anhydromuranmyl-L-alanine amidase 521566 5613717 Ssed_0428 Shewanella sediminis HAW-EB3 N-acetyl-anhydromuranmyl-L-alanine amidase YP_001472169.1 520949 D 425104 CDS YP_001472170.1 157373570 5613718 521706..522557 1 NC_009831.1 involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE 522557 5613718 Ssed_0429 Shewanella sediminis HAW-EB3 regulatory protein AmpE YP_001472170.1 521706 D 425104 CDS YP_001472171.1 157373571 5610073 522956..523708 1 NC_009831.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 523708 pdhR 5610073 pdhR Shewanella sediminis HAW-EB3 transcriptional regulator PdhR YP_001472171.1 522956 D 425104 CDS YP_001472172.1 157373572 5610074 523795..526461 1 NC_009831.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 526461 aceE 5610074 aceE Shewanella sediminis HAW-EB3 pyruvate dehydrogenase subunit E1 YP_001472172.1 523795 D 425104 CDS YP_001472173.1 157373573 5610075 526474..528111 1 NC_009831.1 KEGG: slo:Shew_3430 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; dihydrolipoyllysine-residue succinyltransferase 528111 5610075 Ssed_0432 Shewanella sediminis HAW-EB3 dihydrolipoyllysine-residue succinyltransferase YP_001472173.1 526474 D 425104 CDS YP_001472174.1 157373574 5611189 528266..529693 1 NC_009831.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 529693 5611189 Ssed_0433 Shewanella sediminis HAW-EB3 dihydrolipoamide dehydrogenase YP_001472174.1 528266 D 425104 CDS YP_001472175.1 157373575 5611190 529824..534281 1 NC_009831.1 KEGG: slo:Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 534281 5611190 Ssed_0434 Shewanella sediminis HAW-EB3 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001472175.1 529824 D 425104 CDS YP_001472176.1 157373576 5611191 534359..536614 1 NC_009831.1 KEGG: slo:Shew_3427 patatin; patatin 536614 5611191 Ssed_0435 Shewanella sediminis HAW-EB3 patatin YP_001472176.1 534359 D 425104 CDS YP_001472177.1 157373577 5611192 536775..538829 1 NC_009831.1 KEGG: slo:Shew_3426 endothelin-converting enzyme 1; endothelin-converting protein 1 538829 5611192 Ssed_0436 Shewanella sediminis HAW-EB3 endothelin-converting protein 1 YP_001472177.1 536775 D 425104 CDS YP_001472178.1 157373578 5611366 complement(539133..539798) 1 NC_009831.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase 539798 5611366 Ssed_0437 Shewanella sediminis HAW-EB3 2-deoxyglucose-6-phosphatase YP_001472178.1 539133 R 425104 CDS YP_001472179.1 157373579 5611367 540214..542811 1 NC_009831.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 542811 5611367 Ssed_0438 Shewanella sediminis HAW-EB3 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001472179.1 540214 D 425104 CDS YP_001472180.1 157373580 5611368 complement(542997..543464) 1 NC_009831.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 543464 5611368 Ssed_0439 Shewanella sediminis HAW-EB3 anti-RNA polymerase sigma 70 factor YP_001472180.1 542997 R 425104 CDS YP_001472181.1 157373581 5611369 543991..545055 1 NC_009831.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 545055 hemE 5611369 hemE Shewanella sediminis HAW-EB3 uroporphyrinogen decarboxylase YP_001472181.1 543991 D 425104 CDS YP_001472182.1 157373582 5613910 545598..548210 1 NC_009831.1 KEGG: son:SO0437 sensory box protein; sensory box protein 548210 5613910 Ssed_0441 Shewanella sediminis HAW-EB3 sensory box protein YP_001472182.1 545598 D 425104 CDS YP_001472183.1 157373583 5613911 complement(548378..551380) 1 NC_009831.1 KEGG: slo:Shew_3414 hypothetical protein; hypothetical protein 551380 5613911 Ssed_0442 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472183.1 548378 R 425104 CDS YP_001472184.1 157373584 5613912 complement(551686..552978) 1 NC_009831.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 552978 5613912 Ssed_0443 Shewanella sediminis HAW-EB3 phosphoribosylamine--glycine ligase YP_001472184.1 551686 R 425104 CDS YP_001472185.1 157373585 5612542 complement(553060..554664) 1 NC_009831.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 554664 purH 5612542 purH Shewanella sediminis HAW-EB3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001472185.1 553060 R 425104 CDS YP_001472186.1 157373586 5612543 555335..555814 1 NC_009831.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator 555814 zntR 5612543 zntR Shewanella sediminis HAW-EB3 zinc-responsive transcriptional regulator YP_001472186.1 555335 D 425104 CDS YP_001472187.1 157373587 5612544 555817..557118 1 NC_009831.1 KEGG: slo:Shew_3410 permease; permease 557118 5612544 Ssed_0446 Shewanella sediminis HAW-EB3 permease YP_001472187.1 555817 D 425104 CDS YP_001472188.1 157373588 5612545 557633..559471 1 NC_009831.1 KEGG: saz:Sama_2990 hypothetical protein; hypothetical protein 559471 5612545 Ssed_0447 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472188.1 557633 D 425104 CDS YP_001472189.1 157373589 5610379 559788..561824 1 NC_009831.1 KEGG: pha:PSHAa1953 peptidase; peptidase 561824 5610379 Ssed_0448 Shewanella sediminis HAW-EB3 peptidase YP_001472189.1 559788 D 425104 CDS YP_001472190.1 157373590 5610380 complement(561951..562967) 1 NC_009831.1 KEGG: slo:Shew_3409 lipoprotein; lipoprotein 562967 5610380 Ssed_0449 Shewanella sediminis HAW-EB3 lipoprotein YP_001472190.1 561951 R 425104 CDS YP_001472191.1 157373591 5610381 complement(563331..564059) 1 NC_009831.1 KEGG: slo:Shew_3408 protein of unknown function DUF28; hypothetical protein 564059 5610381 Ssed_0450 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472191.1 563331 R 425104 CDS YP_001472192.1 157373592 5610382 complement(564174..565103) 1 NC_009831.1 KEGG: sbl:Sbal_0481 transcriptional regulator, LysR family; LysR family transcriptional regulator 565103 5610382 Ssed_0451 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472192.1 564174 R 425104 CDS YP_001472193.1 157373593 5612185 565201..566259 1 NC_009831.1 KEGG: shm:Shewmr7_3509 secretion protein HlyD family protein; secretion protein HlyD family protein 566259 5612185 Ssed_0452 Shewanella sediminis HAW-EB3 secretion protein HlyD family protein YP_001472193.1 565201 D 425104 CDS YP_001472194.1 157373594 5612186 566263..567843 1 NC_009831.1 KEGG: sbl:Sbal_0483 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 567843 5612186 Ssed_0453 Shewanella sediminis HAW-EB3 EmrB/QacA family drug resistance transporter YP_001472194.1 566263 D 425104 CDS YP_001472195.1 157373595 5612187 567971..568426 1 NC_009831.1 KEGG: slo:Shew_3397 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 568426 5612187 Ssed_0454 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001472195.1 567971 D 425104 CDS YP_001472196.1 157373596 5612046 complement(568499..568744) 1 NC_009831.1 KEGG: slo:Shew_3396 hypothetical protein; hypothetical protein 568744 5612046 Ssed_0455 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472196.1 568499 R 425104 CDS YP_001472197.1 157373597 5612047 569096..570025 1 NC_009831.1 KEGG: shm:Shewmr7_3501 radical SAM domain protein; radical SAM domain-containing protein 570025 5612047 Ssed_0456 Shewanella sediminis HAW-EB3 radical SAM domain-containing protein YP_001472197.1 569096 D 425104 CDS YP_001472198.1 157373598 5612048 complement(570088..570921) 1 NC_009831.1 KEGG: slo:Shew_3394 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 570921 5612048 Ssed_0457 Shewanella sediminis HAW-EB3 mechanosensitive ion channel protein MscS YP_001472198.1 570088 R 425104 CDS YP_001472199.1 157373599 5612049 571153..571617 1 NC_009831.1 KEGG: shw:Sputw3181_3632 hypothetical protein; hypothetical protein 571617 5612049 Ssed_0458 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472199.1 571153 D 425104 CDS YP_001472200.1 157373600 5612284 complement(571698..571919) 1 NC_009831.1 KEGG: slo:Shew_3391 protein of unknown function DUF465; hypothetical protein 571919 5612284 Ssed_0459 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472200.1 571698 R 425104 CDS YP_001472201.1 157373601 5612285 571921..572160 1 NC_009831.1 hypothetical protein 572160 5612285 Ssed_0460 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472201.1 571921 D 425104 CDS YP_001472202.1 157373602 5612286 572328..573086 1 NC_009831.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 573086 5612286 Ssed_0461 Shewanella sediminis HAW-EB3 uridine phosphorylase YP_001472202.1 572328 D 425104 CDS YP_001472203.1 157373603 5612173 complement(573219..573971) 1 NC_009831.1 KEGG: slo:Shew_3389 hypothetical protein; hypothetical protein 573971 5612173 Ssed_0462 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472203.1 573219 R 425104 CDS YP_001472204.1 157373604 5612174 574310..574783 1 NC_009831.1 KEGG: shw:Sputw3181_3627 protein of unknown function DUF107; hypothetical protein 574783 5612174 Ssed_0463 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472204.1 574310 D 425104 CDS YP_001472205.1 157373605 5612175 574914..575861 1 NC_009831.1 KEGG: slo:Shew_3387 band 7 protein; hypothetical protein 575861 5612175 Ssed_0464 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472205.1 574914 D 425104 CDS YP_001472206.1 157373606 5612176 575858..576793 1 NC_009831.1 KEGG: slo:Shew_3386 band 7 protein; hypothetical protein 576793 5612176 Ssed_0465 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472206.1 575858 D 425104 CDS YP_001472207.1 157373607 5612868 577508..577861 1 NC_009831.1 KEGG: cps:CPS_4240 endoribonuclease, L-PSP family; L-PSP family endoribonuclease 577861 5612868 Ssed_0466 Shewanella sediminis HAW-EB3 L-PSP family endoribonuclease YP_001472207.1 577508 D 425104 CDS YP_001472208.1 157373608 5612869 577962..580127 1 NC_009831.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 580127 uvrD 5612869 uvrD Shewanella sediminis HAW-EB3 DNA-dependent helicase II YP_001472208.1 577962 D 425104 CDS YP_001472209.1 157373609 5612870 580211..581071 1 NC_009831.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 581071 ubiA 5612870 ubiA Shewanella sediminis HAW-EB3 4-hydroxybenzoate octaprenyltransferase YP_001472209.1 580211 D 425104 CDS YP_001472210.1 157373610 5612871 581370..582482 1 NC_009831.1 KEGG: shn:Shewana3_0475 hypothetical protein; hypothetical protein 582482 5612871 Ssed_0469 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472210.1 581370 D 425104 CDS YP_001472211.1 157373611 5612335 complement(582559..583368) 1 NC_009831.1 KEGG: har:HEAR2247 transposase; transposase 583368 5612335 Ssed_0470 Shewanella sediminis HAW-EB3 transposase YP_001472211.1 582559 R 425104 CDS YP_001472212.1 157373612 5612336 complement(583416..583730) 1 NC_009831.1 KEGG: mta:Moth_1610 transposase IS3/IS911; transposase IS3/IS911 583730 5612336 Ssed_0471 Shewanella sediminis HAW-EB3 transposase IS3/IS911 YP_001472212.1 583416 R 425104 CDS YP_001472213.1 157373613 5612337 584339..585871 1 NC_009831.1 KEGG: sdn:Sden_3419 kap P-loop; hypothetical protein 585871 5612337 Ssed_0472 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472213.1 584339 D 425104 CDS YP_001472214.1 157373614 5613016 complement(586226..586804) 1 NC_009831.1 KEGG: slo:Shew_0343 hypothetical protein; hypothetical protein 586804 5613016 Ssed_0473 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472214.1 586226 R 425104 CDS YP_001472215.1 157373615 5613017 complement(586959..587186) 1 NC_009831.1 hypothetical protein 587186 5613017 Ssed_0474 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472215.1 586959 R 425104 CDS YP_001472216.1 157373616 5613018 587565..589082 1 NC_009831.1 KEGG: slo:Shew_0344 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 589082 5613018 Ssed_0475 Shewanella sediminis HAW-EB3 Na+/H+ antiporter NhaC YP_001472216.1 587565 D 425104 CDS YP_001472217.1 157373617 5613019 complement(589131..591197) 1 NC_009831.1 KEGG: shn:Shewana3_0482 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 591197 5613019 Ssed_0476 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001472217.1 589131 R 425104 CDS YP_001472218.1 157373618 5612931 591383..591898 1 NC_009831.1 KEGG: shn:Shewana3_0483 hypothetical protein; hypothetical protein 591898 5612931 Ssed_0477 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472218.1 591383 D 425104 CDS YP_001472219.1 157373619 5612932 591917..592129 1 NC_009831.1 KEGG: shn:Shewana3_0484 transcriptional regulator, XRE family; XRE family transcriptional regulator 592129 5612932 Ssed_0478 Shewanella sediminis HAW-EB3 XRE family transcriptional regulator YP_001472219.1 591917 D 425104 CDS YP_001472220.1 157373620 5612933 complement(592264..592854) 1 NC_009831.1 KEGG: son:SO0476 thioredoxin; thioredoxin 592854 5612933 Ssed_0479 Shewanella sediminis HAW-EB3 thioredoxin YP_001472220.1 592264 R 425104 CDS YP_001472221.1 157373621 5613238 complement(592835..593263) 1 NC_009831.1 KEGG: shw:Sputw3181_0575 cytochrome c biogenesis protein; cytochrome c biogenesis protein 593263 5613238 Ssed_0480 Shewanella sediminis HAW-EB3 cytochrome c biogenesis protein YP_001472221.1 592835 R 425104 CDS YP_001472222.1 157373622 5613239 complement(593260..595230) 1 NC_009831.1 KEGG: shw:Sputw3181_0576 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 595230 5613239 Ssed_0481 Shewanella sediminis HAW-EB3 cytochrome c-type biogenesis protein CcmF YP_001472222.1 593260 R 425104 CDS YP_001472223.1 157373623 5613240 595777..597813 1 NC_009831.1 KEGG: slo:Shew_0348 cytochrome c; cytochrome c 597813 5613240 Ssed_0482 Shewanella sediminis HAW-EB3 cytochrome c YP_001472223.1 595777 D 425104 CDS YP_001472224.1 157373624 5613241 597859..598314 1 NC_009831.1 KEGG: shw:Sputw3181_0578 rhodanese domain protein; rhodanese domain-containing protein 598314 5613241 Ssed_0483 Shewanella sediminis HAW-EB3 rhodanese domain-containing protein YP_001472224.1 597859 D 425104 CDS YP_001472225.1 157373625 5613354 598369..599157 1 NC_009831.1 KEGG: slo:Shew_0350 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 599157 5613354 Ssed_0484 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001472225.1 598369 D 425104 CDS YP_001472226.1 157373626 5613355 599191..599898 1 NC_009831.1 KEGG: shn:Shewana3_0492 formate-dependent nitrite reductase, NrfG protein; cytochrome c biogenesis factor-like protein 599898 5613355 Ssed_0485 Shewanella sediminis HAW-EB3 cytochrome c biogenesis factor-like protein YP_001472226.1 599191 D 425104 CDS YP_001472227.1 157373627 5613356 599949..600653 1 NC_009831.1 KEGG: she:Shewmr4_0492 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 600653 5613356 Ssed_0486 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001472227.1 599949 D 425104 CDS YP_001472228.1 157373628 5613357 600656..601603 1 NC_009831.1 KEGG: slo:Shew_0353 polysulphide reductase, NrfD; polysulfide reductase NrfD 601603 5613357 Ssed_0487 Shewanella sediminis HAW-EB3 polysulfide reductase NrfD YP_001472228.1 600656 D 425104 CDS YP_001472229.1 157373629 5613348 601920..602420 1 NC_009831.1 KEGG: she:Shewmr4_0494 NosL family protein; NosL family protein 602420 5613348 Ssed_0488 Shewanella sediminis HAW-EB3 NosL family protein YP_001472229.1 601920 D 425104 CDS YP_001472230.1 157373630 5613349 602567..603799 1 NC_009831.1 KEGG: shw:Sputw3181_0582 periplasmic copper-binding; copper-binding protein 603799 5613349 Ssed_0489 Shewanella sediminis HAW-EB3 copper-binding protein YP_001472230.1 602567 D 425104 CDS YP_001472231.1 157373631 5613350 603793..604701 1 NC_009831.1 KEGG: slo:Shew_0356 ABC transporter-related protein; ABC transporter-like protein 604701 5613350 Ssed_0490 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001472231.1 603793 D 425104 CDS YP_001472232.1 157373632 5613843 604714..605553 1 NC_009831.1 KEGG: slo:Shew_0357 copper ABC transporter, permease; copper ABC transporter permease 605553 5613843 Ssed_0491 Shewanella sediminis HAW-EB3 copper ABC transporter permease YP_001472232.1 604714 D 425104 CDS YP_001472233.1 157373633 5613844 605844..607127 1 NC_009831.1 KEGG: shw:Sputw3181_0585 transcriptional regulator, CadC; transcriptional regulator CadC 607127 5613844 Ssed_0492 Shewanella sediminis HAW-EB3 transcriptional regulator CadC YP_001472233.1 605844 D 425104 CDS YP_001472234.1 157373634 5613845 607731..609761 1 NC_009831.1 KEGG: slo:Shew_0348 cytochrome c; cytochrome c 609761 5613845 Ssed_0493 Shewanella sediminis HAW-EB3 cytochrome c YP_001472234.1 607731 D 425104 CDS YP_001472235.1 157373635 5613846 609839..610267 1 NC_009831.1 KEGG: son:SO0480 hypothetical protein; hypothetical protein 610267 5613846 Ssed_0494 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472235.1 609839 D 425104 CDS YP_001472236.1 157373636 5613314 610330..611121 1 NC_009831.1 KEGG: slo:Shew_0350 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 611121 5613314 Ssed_0495 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001472236.1 610330 D 425104 CDS YP_001472237.1 157373637 5613315 611182..611904 1 NC_009831.1 KEGG: slo:Shew_0351 tetratricopeptide TPR_2 repeat protein; hypothetical protein 611904 5613315 Ssed_0496 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472237.1 611182 D 425104 CDS YP_001472238.1 157373638 5613316 611968..612678 1 NC_009831.1 KEGG: she:Shewmr4_0492 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 612678 5613316 Ssed_0497 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001472238.1 611968 D 425104 CDS YP_001472239.1 157373639 5613317 612681..613628 1 NC_009831.1 KEGG: slo:Shew_0353 polysulphide reductase, NrfD; polysulfide reductase NrfD 613628 5613317 Ssed_0498 Shewanella sediminis HAW-EB3 polysulfide reductase NrfD YP_001472239.1 612681 D 425104 CDS YP_001472240.1 157373640 5613691 613800..614288 1 NC_009831.1 KEGG: son:SO0485 NosL protein; NosL protein 614288 5613691 Ssed_0499 Shewanella sediminis HAW-EB3 NosL protein YP_001472240.1 613800 D 425104 CDS YP_001472241.1 157373641 5613692 614295..615584 1 NC_009831.1 KEGG: shw:Sputw3181_0582 periplasmic copper-binding; periplasmic copper-binding protein 615584 5613692 Ssed_0500 Shewanella sediminis HAW-EB3 periplasmic copper-binding protein YP_001472241.1 614295 D 425104 CDS YP_001472242.1 157373642 5613693 615611..616513 1 NC_009831.1 KEGG: slo:Shew_0356 ABC transporter-related protein; ABC transporter-like protein 616513 5613693 Ssed_0501 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001472242.1 615611 D 425104 CDS YP_001472243.1 157373643 5613917 616515..617345 1 NC_009831.1 KEGG: slo:Shew_0357 copper ABC transporter, permease; copper ABC transporter permease 617345 5613917 Ssed_0502 Shewanella sediminis HAW-EB3 copper ABC transporter permease YP_001472243.1 616515 D 425104 CDS YP_001472244.1 157373644 5613918 617625..618908 1 NC_009831.1 KEGG: shn:Shewana3_0499 transcriptional regulator, CadC; transcriptional regulator CadC 618908 5613918 Ssed_0503 Shewanella sediminis HAW-EB3 transcriptional regulator CadC YP_001472244.1 617625 D 425104 CDS YP_001472245.1 157373645 5613919 complement(619041..619751) 1 NC_009831.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 619751 fre 5613919 fre Shewanella sediminis HAW-EB3 FMN reductase YP_001472245.1 619041 R 425104 CDS YP_001472246.1 157373646 5613920 complement(619832..621313) 1 NC_009831.1 KEGG: slo:Shew_0360 UbiD family decarboxylase; UbiD family decarboxylase 621313 5613920 Ssed_0505 Shewanella sediminis HAW-EB3 UbiD family decarboxylase YP_001472246.1 619832 R 425104 CDS YP_001472247.1 157373647 5614120 621781..622272 1 NC_009831.1 KEGG: slo:Shew_0361 hypothetical protein; hypothetical protein 622272 5614120 Ssed_0506 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472247.1 621781 D 425104 CDS YP_001472248.1 157373648 5614121 622689..622946 1 NC_009831.1 KEGG: son:SO_A0050 toxin secretion, membrane fusion protein; toxin secretion, membrane fusion protein 622946 5614121 Ssed_0507 Shewanella sediminis HAW-EB3 toxin secretion, membrane fusion protein YP_001472248.1 622689 D 425104 CDS YP_001472249.1 157373649 5614122 623989..624969 1 NC_009831.1 KEGG: sbl:Sbal_3194 CheW protein; chemotaxis protein CheW 624969 5614122 Ssed_0508 Shewanella sediminis HAW-EB3 chemotaxis protein CheW YP_001472249.1 623989 D 425104 CDS YP_001472250.1 157373650 5612301 complement(625017..625547) 1 NC_009831.1 KEGG: sfr:Sfri_3606 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 625547 5612301 Ssed_0509 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001472250.1 625017 R 425104 CDS YP_001472251.1 157373651 5612302 complement(626137..626637) 1 NC_009831.1 KEGG: cps:CPS_2140 lipoprotein; lipoprotein 626637 5612302 Ssed_0510 Shewanella sediminis HAW-EB3 lipoprotein YP_001472251.1 626137 R 425104 CDS YP_001472252.1 157373652 5612303 627002..628204 1 NC_009831.1 KEGG: ppr:PBPRA2465 tyrosine-specific transport protein; tyrosine-specific transport protein 628204 5612303 Ssed_0511 Shewanella sediminis HAW-EB3 tyrosine-specific transport protein YP_001472252.1 627002 D 425104 CDS YP_001472253.1 157373653 5611642 629048..629992 1 NC_009831.1 KEGG: saz:Sama_2899 transcriptional regulator-like protein; transcriptional regulator-like protein 629992 5611642 Ssed_0512 Shewanella sediminis HAW-EB3 transcriptional regulator-like protein YP_001472253.1 629048 D 425104 CDS YP_001472254.1 157373654 5613876 630551..631477 1 NC_009831.1 KEGG: slo:Shew_0759 cytochrome c; cytochrome c 631477 5613876 Ssed_0513 Shewanella sediminis HAW-EB3 cytochrome c YP_001472254.1 630551 D 425104 CDS YP_001472255.1 157373655 5613877 631488..632033 1 NC_009831.1 KEGG: shm:Shewmr7_3242 hypothetical protein; hypothetical protein 632033 5613877 Ssed_0514 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472255.1 631488 D 425104 CDS YP_001472256.1 157373656 5613878 complement(633107..633397) 1 NC_009831.1 KEGG: shw:Sputw3181_2184 hypothetical protein; hypothetical protein 633397 5613878 Ssed_0515 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472256.1 633107 R 425104 CDS YP_001472257.1 157373657 5613879 complement(633420..634361) 1 NC_009831.1 KEGG: son:SO4568 formate-dependent nitrite reductase, nrfD protein; formate-dependent nitrite reductase complex subunit NrfD 634361 5613879 Ssed_0516 Shewanella sediminis HAW-EB3 formate-dependent nitrite reductase complex subunit NrfD YP_001472257.1 633420 R 425104 CDS YP_001472258.1 157373658 5614162 complement(634358..635047) 1 NC_009831.1 KEGG: shw:Sputw3181_3894 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 635047 5614162 Ssed_0517 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001472258.1 634358 R 425104 CDS YP_001472259.1 157373659 5614163 complement(635060..635530) 1 NC_009831.1 KEGG: slo:Shew_3156 hypothetical protein; hypothetical protein 635530 5614163 Ssed_0518 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472259.1 635060 R 425104 CDS YP_001472260.1 157373660 5614164 complement(635613..636107) 1 NC_009831.1 KEGG: slo:Shew_3155 hypothetical protein; hypothetical protein 636107 5614164 Ssed_0519 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472260.1 635613 R 425104 CDS YP_001472261.1 157373661 5613751 636590..637555 1 NC_009831.1 KEGG: shn:Shewana3_3964 transcriptional regulator, LysR family; LysR family transcriptional regulator 637555 5613751 Ssed_0520 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472261.1 636590 D 425104 CDS YP_001472262.1 157373662 5613752 complement(637776..638084) 1 NC_009831.1 KEGG: slo:Shew_0372 hypothetical protein; hypothetical protein 638084 5613752 Ssed_0521 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472262.1 637776 R 425104 CDS YP_001472263.1 157373663 5613753 638859..639029 1 NC_009831.1 KEGG: pha:PSHAa1073 hypothetical protein; hypothetical protein 639029 5613753 Ssed_0523 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472263.1 638859 D 425104 CDS YP_001472264.1 157373664 5613754 complement(639199..640302) 1 NC_009831.1 KEGG: vfi:VF0872 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 640302 5613754 Ssed_0524 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001472264.1 639199 R 425104 CDS YP_001472265.1 157373665 5613981 640603..641556 1 NC_009831.1 KEGG: pol:Bpro_3376 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase 641556 5613981 Ssed_0525 Shewanella sediminis HAW-EB3 nitrilase YP_001472265.1 640603 D 425104 CDS YP_001472266.1 157373666 5613982 complement(641660..642463) 1 NC_009831.1 KEGG: shn:Shewana3_4008 transcriptional regulator, LuxR family; hypothetical protein 642463 5613982 Ssed_0526 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472266.1 641660 R 425104 CDS YP_001472267.1 157373667 5613983 complement(642520..644379) 1 NC_009831.1 hypothetical protein 644379 5613983 Ssed_0527 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472267.1 642520 R 425104 CDS YP_001472268.1 157373668 5613211 complement(644770..645162) 1 NC_009831.1 KEGG: slo:Shew_0373 protein of unknown function DUF971; hypothetical protein 645162 5613211 Ssed_0528 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472268.1 644770 R 425104 CDS YP_001472269.1 157373669 5613212 complement(645332..647365) 1 NC_009831.1 KEGG: ppr:PBPRB1868 hypothetical chemotaxis transducer; methyl-accepting chemotaxis protein-like protein 647365 5613212 Ssed_0529 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein-like protein YP_001472269.1 645332 R 425104 CDS YP_001472270.1 157373670 5613213 complement(647610..648935) 1 NC_009831.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 648935 hslU 5613213 hslU Shewanella sediminis HAW-EB3 ATP-dependent protease ATP-binding subunit HslU YP_001472270.1 647610 R 425104 CDS YP_001472271.1 157373671 5613214 complement(649009..649533) 1 NC_009831.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 649533 5613214 Ssed_0531 Shewanella sediminis HAW-EB3 ATP-dependent protease peptidase subunit YP_001472271.1 649009 R 425104 CDS YP_001472272.1 157373672 5613784 complement(649764..650330) 1 NC_009831.1 KEGG: slo:Shew_0377 sporulation domain protein; sporulation domain-containing protein 650330 5613784 Ssed_0532 Shewanella sediminis HAW-EB3 sporulation domain-containing protein YP_001472272.1 649764 R 425104 CDS YP_001472273.1 157373673 5613785 complement(650433..652178) 1 NC_009831.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 652178 argS 5613785 argS Shewanella sediminis HAW-EB3 arginyl-tRNA synthetase YP_001472273.1 650433 R 425104 CDS YP_001472274.1 157373674 5613786 complement(652346..654574) 1 NC_009831.1 KEGG: slo:Shew_0379 primosomal protein N'; primosomal protein N' 654574 5613786 Ssed_0534 Shewanella sediminis HAW-EB3 primosomal protein N' YP_001472274.1 652346 R 425104 CDS YP_001472275.1 157373675 5613787 654629..655435 1 NC_009831.1 KEGG: slo:Shew_0380 hypothetical protein; hypothetical protein 655435 5613787 Ssed_0535 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472275.1 654629 D 425104 CDS YP_001472276.1 157373676 5613680 655695..655907 1 NC_009831.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 655907 rpmE 5613680 rpmE Shewanella sediminis HAW-EB3 50S ribosomal protein L31 YP_001472276.1 655695 D 425104 CDS YP_001472277.1 157373677 5613681 656060..656920 1 NC_009831.1 KEGG: slo:Shew_0382 nuclease (SNase domain protein); nuclease 656920 5613681 Ssed_0537 Shewanella sediminis HAW-EB3 nuclease YP_001472277.1 656060 D 425104 CDS YP_001472278.1 157373678 5613682 657089..658336 1 NC_009831.1 KEGG: slo:Shew_0383 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); malate dehydrogenase 658336 5613682 Ssed_0538 Shewanella sediminis HAW-EB3 malate dehydrogenase YP_001472278.1 657089 D 425104 CDS YP_001472279.1 157373679 5612501 658641..660551 1 NC_009831.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 660551 5612501 Ssed_0539 Shewanella sediminis HAW-EB3 regulatory protein CsrD YP_001472279.1 658641 D 425104 CDS YP_001472280.1 157373680 5612502 660903..661817 1 NC_009831.1 KEGG: sbl:Sbal_3839 conserved hypothetical biogenesis protein MshI; biogenesis protein MshI 661817 5612502 Ssed_0540 Shewanella sediminis HAW-EB3 biogenesis protein MshI YP_001472280.1 660903 D 425104 CDS YP_001472281.1 157373681 5612503 661814..662425 1 NC_009831.1 KEGG: slo:Shew_0386 fimbrial assembly family protein; fimbrial assembly family protein 662425 5612503 Ssed_0541 Shewanella sediminis HAW-EB3 fimbrial assembly family protein YP_001472281.1 661814 D 425104 CDS YP_001472282.1 157373682 5612504 662422..663072 1 NC_009831.1 KEGG: slo:Shew_0387 MSHA biogenesis protein MshJ; MSHA biogenesis protein MshJ 663072 5612504 Ssed_0542 Shewanella sediminis HAW-EB3 MSHA biogenesis protein MshJ YP_001472282.1 662422 D 425104 CDS YP_001472283.1 157373683 5610593 663059..663409 1 NC_009831.1 KEGG: she:Shewmr4_3487 MSHA biogenesis protein MshK; MSHA biogenesis protein MshK 663409 5610593 Ssed_0543 Shewanella sediminis HAW-EB3 MSHA biogenesis protein MshK YP_001472283.1 663059 D 425104 CDS YP_001472284.1 157373684 5610594 663406..665109 1 NC_009831.1 KEGG: slo:Shew_0389 pilus (MSHA type) biogenesis protein MshL; pilus (MSHA type) biogenesis protein MshL 665109 5610594 Ssed_0544 Shewanella sediminis HAW-EB3 pilus (MSHA type) biogenesis protein MshL YP_001472284.1 663406 D 425104 CDS YP_001472285.1 157373685 5610595 665113..666021 1 NC_009831.1 KEGG: sbl:Sbal_3834 MSHA biogenesis protein MshM; MSHA biogenesis protein MshM 666021 5610595 Ssed_0545 Shewanella sediminis HAW-EB3 MSHA biogenesis protein MshM YP_001472285.1 665113 D 425104 CDS YP_001472286.1 157373686 5610596 666018..667259 1 NC_009831.1 KEGG: slo:Shew_0391 tetratricopeptide TPR_2 repeat protein; hypothetical protein 667259 5610596 Ssed_0546 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472286.1 666018 D 425104 CDS YP_001472287.1 157373687 5611179 667256..669010 1 NC_009831.1 KEGG: shm:Shewmr7_0469 type II secretion system protein E; type II secretion system protein E 669010 5611179 Ssed_0547 Shewanella sediminis HAW-EB3 type II secretion system protein E YP_001472287.1 667256 D 425104 CDS YP_001472288.1 157373688 5611180 669099..670319 1 NC_009831.1 KEGG: shn:Shewana3_3659 type II secretion system protein; type II secretion system protein 670319 5611180 Ssed_0548 Shewanella sediminis HAW-EB3 type II secretion system protein YP_001472288.1 669099 D 425104 CDS YP_001472289.1 157373689 5611181 670354..670875 1 NC_009831.1 KEGG: slo:Shew_0394 hypothetical protein; hypothetical protein 670875 5611181 Ssed_0549 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472289.1 670354 D 425104 CDS YP_001472290.1 157373690 5610253 670947..671603 1 NC_009831.1 KEGG: slo:Shew_0395 methylation site containing protein; methylation site containing protein 671603 5610253 Ssed_0550 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001472290.1 670947 D 425104 CDS YP_001472291.1 157373691 5610254 671696..672217 1 NC_009831.1 KEGG: saz:Sama_0461 MSHA pilin protein MshA; MSHA pilin protein MshA 672217 5610254 Ssed_0551 Shewanella sediminis HAW-EB3 MSHA pilin protein MshA YP_001472291.1 671696 D 425104 CDS YP_001472292.1 157373692 5610255 672263..672742 1 NC_009831.1 KEGG: saz:Sama_0461 MSHA pilin protein MshA; MSHA pilin protein MshA 672742 5610255 Ssed_0552 Shewanella sediminis HAW-EB3 MSHA pilin protein MshA YP_001472292.1 672263 D 425104 CDS YP_001472293.1 157373693 5610256 672951..673418 1 NC_009831.1 KEGG: shw:Sputw3181_3603 MSHA pilin protein MshC; MSHA pilin protein MshC 673418 5610256 Ssed_0553 Shewanella sediminis HAW-EB3 MSHA pilin protein MshC YP_001472293.1 672951 D 425104 CDS YP_001472294.1 157373694 5614064 673408..674004 1 NC_009831.1 KEGG: slo:Shew_0399 methylation site containing protein; methylation site containing protein 674004 5614064 Ssed_0554 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001472294.1 673408 D 425104 CDS YP_001472295.1 157373695 5614065 674004..674813 1 NC_009831.1 KEGG: slo:Shew_0400 methylation site containing protein; methylation site containing protein 674813 5614065 Ssed_0555 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001472295.1 674004 D 425104 CDS YP_001472296.1 157373696 5614066 674803..675288 1 NC_009831.1 KEGG: sfr:Sfri_3740 MSHA biogenesis protein MshP; MSHA biogenesis protein MshP 675288 5614066 Ssed_0556 Shewanella sediminis HAW-EB3 MSHA biogenesis protein MshP YP_001472296.1 674803 D 425104 CDS YP_001472297.1 157373697 5614080 675290..678010 1 NC_009831.1 KEGG: slo:Shew_0402 MSHA biogenesis protein MshQ; MSHA biogenesis protein MshQ 678010 5614080 Ssed_0557 Shewanella sediminis HAW-EB3 MSHA biogenesis protein MshQ YP_001472297.1 675290 D 425104 CDS YP_001472298.1 157373698 5614081 678219..679268 1 NC_009831.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 679268 5614081 Ssed_0558 Shewanella sediminis HAW-EB3 rod shape-determining protein MreB YP_001472298.1 678219 D 425104 CDS YP_001472299.1 157373699 5614082 679407..680303 1 NC_009831.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 680303 5614082 Ssed_0559 Shewanella sediminis HAW-EB3 rod shape-determining protein MreC YP_001472299.1 679407 D 425104 CDS YP_001472300.1 157373700 5614083 680300..680788 1 NC_009831.1 KEGG: slo:Shew_0405 rod shape-determining protein MreD; rod shape-determining protein MreD 680788 5614083 Ssed_0560 Shewanella sediminis HAW-EB3 rod shape-determining protein MreD YP_001472300.1 680300 D 425104 CDS YP_001472301.1 157373701 5610407 680791..681387 1 NC_009831.1 KEGG: slo:Shew_0406 maf protein; maf protein 681387 5610407 Ssed_0561 Shewanella sediminis HAW-EB3 maf protein YP_001472301.1 680791 D 425104 CDS YP_001472302.1 157373702 5610408 681497..682999 1 NC_009831.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 682999 5610408 Ssed_0562 Shewanella sediminis HAW-EB3 ribonuclease G YP_001472302.1 681497 D 425104 CDS YP_001472303.1 157373703 5610409 682999..687258 1 NC_009831.1 KEGG: slo:Shew_0408 hypothetical protein; hypothetical protein 687258 5610409 Ssed_0563 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472303.1 682999 D 425104 CDS YP_001472304.1 157373704 5610410 687182..688027 1 NC_009831.1 KEGG: sbl:Sbal_3816 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 688027 5610410 Ssed_0564 Shewanella sediminis HAW-EB3 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001472304.1 687182 D 425104 CDS YP_001472305.1 157373705 5612469 688086..689558 1 NC_009831.1 KEGG: slo:Shew_0410 peptidase U62, modulator of DNA gyrase; C69 family peptidase 689558 5612469 Ssed_0565 Shewanella sediminis HAW-EB3 C69 family peptidase YP_001472305.1 688086 D 425104 CDS YP_001472306.1 157373706 5612470 689688..691109 1 NC_009831.1 KEGG: slo:Shew_0411 outer membrane efflux protein; outer membrane efflux protein 691109 5612470 Ssed_0566 Shewanella sediminis HAW-EB3 outer membrane efflux protein YP_001472306.1 689688 D 425104 CDS YP_001472307.1 157373707 5612471 691099..692070 1 NC_009831.1 KEGG: slo:Shew_0412 secretion protein HlyD family protein; secretion protein HlyD family protein 692070 5612471 Ssed_0567 Shewanella sediminis HAW-EB3 secretion protein HlyD family protein YP_001472307.1 691099 D 425104 CDS YP_001472308.1 157373708 5609814 692089..693252 1 NC_009831.1 KEGG: slo:Shew_0413 ABC-2 type transporter; ABC transporter 693252 5609814 Ssed_0568 Shewanella sediminis HAW-EB3 ABC transporter YP_001472308.1 692089 D 425104 CDS YP_001472309.1 157373709 5609815 693249..694397 1 NC_009831.1 KEGG: she:Shewmr4_3461 ABC-2 type transporter; ABC transporter 694397 5609815 Ssed_0569 Shewanella sediminis HAW-EB3 ABC transporter YP_001472309.1 693249 D 425104 CDS YP_001472310.1 157373710 5609816 complement(694715..697270) 1 NC_009831.1 KEGG: sbl:Sbal_3807 Ig domain protein, group 1 domain protein; Ig domain-containing protein 697270 5609816 Ssed_0570 Shewanella sediminis HAW-EB3 Ig domain-containing protein YP_001472310.1 694715 R 425104 CDS YP_001472311.1 157373711 5609817 complement(697353..697892) 1 NC_009831.1 KEGG: slo:Shew_0415 protein of unknown function DUF615; hypothetical protein 697892 5609817 Ssed_0571 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472311.1 697353 R 425104 CDS YP_001472312.1 157373712 5609611 698124..699464 1 NC_009831.1 KEGG: slo:Shew_0416 peptidase U62, modulator of DNA gyrase; C69 family peptidase 699464 5609611 Ssed_0572 Shewanella sediminis HAW-EB3 C69 family peptidase YP_001472312.1 698124 D 425104 CDS YP_001472313.1 157373713 5609612 699606..700106 1 NC_009831.1 KEGG: slo:Shew_0364 MshA, mannose-sensitive haemaglutinin; mannose-sensitive hemagglutinin MshA 700106 5609612 Ssed_0573 Shewanella sediminis HAW-EB3 mannose-sensitive hemagglutinin MshA YP_001472313.1 699606 D 425104 CDS YP_001472314.1 157373714 5609613 700340..700684 1 NC_009831.1 KEGG: slo:Shew_0417 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 700684 5609613 Ssed_0574 Shewanella sediminis HAW-EB3 ArsR family transcriptional regulator YP_001472314.1 700340 D 425104 CDS YP_001472315.1 157373715 5609972 700791..701840 1 NC_009831.1 KEGG: slo:Shew_0418 arsenical-resistance protein; arsenical-resistance protein 701840 5609972 Ssed_0575 Shewanella sediminis HAW-EB3 arsenical-resistance protein YP_001472315.1 700791 D 425104 CDS YP_001472316.1 157373716 5609973 701844..702905 1 NC_009831.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 702905 5609973 Ssed_0576 Shewanella sediminis HAW-EB3 glyceraldehyde-3-phosphate dehydrogenase YP_001472316.1 701844 D 425104 CDS YP_001472317.1 157373717 5609974 703016..704257 1 NC_009831.1 KEGG: slo:Shew_0420 major facilitator superfamily MFS_1; major facilitator superfamily transporter 704257 5609974 Ssed_0577 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001472317.1 703016 D 425104 CDS YP_001472318.1 157373718 5609975 705085..705303 1 NC_009831.1 KEGG: sdn:Sden_1874 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 705303 5609975 Ssed_0578 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001472318.1 705085 D 425104 CDS YP_001472319.1 157373719 5610182 complement(705321..706250) 1 NC_009831.1 KEGG: vpa:VP2406 LysR-like regular protein; LysR-like regular protein 706250 5610182 Ssed_0579 Shewanella sediminis HAW-EB3 LysR-like regular protein YP_001472319.1 705321 R 425104 CDS YP_001472320.1 157373720 5610183 706356..707492 1 NC_009831.1 KEGG: vpa:VP2407 chromate resistance protein-related protein; chromate resistance protein-related protein 707492 5610183 Ssed_0580 Shewanella sediminis HAW-EB3 chromate resistance protein-related protein YP_001472320.1 706356 D 425104 CDS YP_001472321.1 157373721 5610184 complement(707643..709520) 1 NC_009831.1 KEGG: sdn:Sden_2587 GGDEF domain; diguanylate cyclase 709520 5610184 Ssed_0581 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001472321.1 707643 R 425104 CDS YP_001472322.1 157373722 5609965 709771..710268 1 NC_009831.1 KEGG: sdn:Sden_1874 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 710268 5609965 Ssed_0582 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001472322.1 709771 D 425104 CDS YP_001472323.1 157373723 5609966 711267..711389 1 NC_009831.1 KEGG: shm:Shewmr7_3567 hypothetical protein; hypothetical protein 711389 5609966 Ssed_0583 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472323.1 711267 D 425104 CDS YP_001472324.1 157373724 5609967 712221..713600 1 NC_009831.1 KEGG: slo:Shew_0424 amino acid carrier protein; amino acid carrier protein 713600 5609967 Ssed_0584 Shewanella sediminis HAW-EB3 amino acid carrier protein YP_001472324.1 712221 D 425104 CDS YP_001472325.1 157373725 5609968 complement(713851..714966) 1 NC_009831.1 KEGG: slo:Shew_0425 ABC-2 type transporter; ABC transporter 714966 5609968 Ssed_0585 Shewanella sediminis HAW-EB3 ABC transporter YP_001472325.1 713851 R 425104 CDS YP_001472326.1 157373726 5610128 complement(714968..715951) 1 NC_009831.1 KEGG: slo:Shew_0426 ABC transporter-related protein; ABC transporter-like protein 715951 5610128 Ssed_0586 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001472326.1 714968 R 425104 CDS YP_001472327.1 157373727 5610129 complement(715948..716892) 1 NC_009831.1 KEGG: slo:Shew_0427 hypothetical protein; hypothetical protein 716892 5610129 Ssed_0587 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472327.1 715948 R 425104 CDS YP_001472328.1 157373728 5610130 717378..718286 1 NC_009831.1 hypothetical protein 718286 5610130 Ssed_0588 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472328.1 717378 D 425104 CDS YP_001472329.1 157373729 5609782 718427..719533 1 NC_009831.1 KEGG: cbo:CBO0434 membrane protein; hypothetical protein 719533 5609782 Ssed_0589 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472329.1 718427 D 425104 CDS YP_001472330.1 157373730 5609783 719671..720528 1 NC_009831.1 KEGG: vfi:VFA0898 hypothetical protein; hypothetical protein 720528 5609783 Ssed_0590 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472330.1 719671 D 425104 CDS YP_001472331.1 157373731 5609784 720630..721193 1 NC_009831.1 KEGG: sbl:Sbal_2970 hypothetical protein; hypothetical protein 721193 5609784 Ssed_0591 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472331.1 720630 D 425104 CDS YP_001472332.1 157373732 5609785 721346..722806 1 NC_009831.1 KEGG: ppr:PBPRA1115 hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 722806 5609785 Ssed_0592 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001472332.1 721346 D 425104 CDS YP_001472333.1 157373733 5610335 complement(723065..724111) 1 NC_009831.1 KEGG: pau:PA14_24920 transcriptional regulator; transcriptional regulator 724111 5610335 Ssed_0593 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001472333.1 723065 R 425104 CDS YP_001472334.1 157373734 5610336 724186..725883 1 NC_009831.1 KEGG: maq:Maqu_1346 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 725883 5610336 Ssed_0594 Shewanella sediminis HAW-EB3 FAD linked oxidase domain-containing protein YP_001472334.1 724186 D 425104 CDS YP_001472335.1 157373735 5610337 725880..727535 1 NC_009831.1 KEGG: maq:Maqu_1345 FAD dependent oxidoreductase; FAD dependent oxidoreductase 727535 5610337 Ssed_0595 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001472335.1 725880 D 425104 CDS YP_001472336.1 157373736 5610155 727532..729097 1 NC_009831.1 KEGG: hch:HCH_04623 sugar (pentulose and hexulose) kinase; sugar (pentulose and hexulose) kinase 729097 5610155 Ssed_0596 Shewanella sediminis HAW-EB3 sugar (pentulose and hexulose) kinase YP_001472336.1 727532 D 425104 CDS YP_001472337.1 157373737 5610156 729208..729483 1 NC_009831.1 hypothetical protein 729483 5610156 Ssed_0597 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472337.1 729208 D 425104 CDS YP_001472338.1 157373738 5610157 complement(729602..729775) 1 NC_009831.1 KEGG: slo:Shew_0428 hypothetical protein; hypothetical protein 729775 5610157 Ssed_0598 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472338.1 729602 R 425104 CDS YP_001472339.1 157373739 5610158 complement(730228..730920) 1 NC_009831.1 KEGG: slo:Shew_0429 hypothetical protein; hypothetical protein 730920 5610158 Ssed_0599 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472339.1 730228 R 425104 CDS YP_001472340.1 157373740 5609898 complement(731198..731470) 1 NC_009831.1 KEGG: slo:Shew_0430 histone family protein DNA-binding protein; histone family protein DNA-binding protein 731470 5609898 Ssed_0600 Shewanella sediminis HAW-EB3 histone family protein DNA-binding protein YP_001472340.1 731198 R 425104 CDS YP_001472341.1 157373741 5609899 complement(731730..732527) 1 NC_009831.1 KEGG: shw:Sputw3181_0617 response regulator receiver protein; response regulator receiver protein 732527 5609899 Ssed_0601 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001472341.1 731730 R 425104 CDS YP_001472342.1 157373742 5609900 complement(732625..733017) 1 NC_009831.1 KEGG: slo:Shew_0431 hypothetical protein; hypothetical protein 733017 5609900 Ssed_0602 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472342.1 732625 R 425104 CDS YP_001472343.1 157373743 5609921 733132..733641 1 NC_009831.1 KEGG: slo:Shew_0432 hypothetical protein; hypothetical protein 733641 5609921 Ssed_0603 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472343.1 733132 D 425104 CDS YP_001472344.1 157373744 5609922 complement(733711..734022) 1 NC_009831.1 KEGG: slo:Shew_0433 hypothetical protein; hypothetical protein 734022 5609922 Ssed_0604 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472344.1 733711 R 425104 CDS YP_001472345.1 157373745 5609923 complement(734473..734754) 1 NC_009831.1 hypothetical protein 734754 5609923 Ssed_0605 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472345.1 734473 R 425104 CDS YP_001472346.1 157373746 5609924 complement(734933..735238) 1 NC_009831.1 KEGG: slo:Shew_0434 hypothetical protein; hypothetical protein 735238 5609924 Ssed_0606 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472346.1 734933 R 425104 CDS YP_001472347.1 157373747 5612574 735656..736180 1 NC_009831.1 KEGG: sbl:Sbal_0513 hypothetical protein; hypothetical protein 736180 5612574 Ssed_0607 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472347.1 735656 D 425104 CDS YP_001472348.1 157373748 5612575 complement(736345..736656) 1 NC_009831.1 KEGG: slo:Shew_0437 hypothetical protein; hypothetical protein 736656 5612575 Ssed_0608 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472348.1 736345 R 425104 CDS YP_001472349.1 157373749 5612576 736712..737593 1 NC_009831.1 KEGG: slo:Shew_0438 GumN family protein; GumN family protein 737593 5612576 Ssed_0609 Shewanella sediminis HAW-EB3 GumN family protein YP_001472349.1 736712 D 425104 CDS YP_001472350.1 157373750 5613124 737723..738352 1 NC_009831.1 stimulates methylation of MCP proteins; KEGG: slo:Shew_0439 CheD, stimulates methylation of MCP proteins; hypothetical protein 738352 5613124 Ssed_0610 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472350.1 737723 D 425104 CDS YP_001472351.1 157373751 5613125 738591..739457 1 NC_009831.1 KEGG: sbl:Sbal_0518 MaoC domain protein dehydratase; dehydratase 739457 5613125 Ssed_0611 Shewanella sediminis HAW-EB3 dehydratase YP_001472351.1 738591 D 425104 CDS YP_001472352.1 157373752 5613126 739740..741452 1 NC_009831.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 741452 5613126 Ssed_0612 Shewanella sediminis HAW-EB3 formate--tetrahydrofolate ligase YP_001472352.1 739740 D 425104 CDS YP_001472353.1 157373753 5613127 complement(741683..743326) 1 NC_009831.1 KEGG: slo:Shew_0444 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 743326 5613127 Ssed_0613 Shewanella sediminis HAW-EB3 mechanosensitive ion channel protein MscS YP_001472353.1 741683 R 425104 CDS YP_001472354.1 157373754 5610035 743520..743855 1 NC_009831.1 KEGG: slo:Shew_0445 hypothetical protein; hypothetical protein 743855 5610035 Ssed_0614 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472354.1 743520 D 425104 CDS YP_001472355.1 157373755 5610036 744417..744704 1 NC_009831.1 KEGG: sbl:Sbal_0525 hypothetical protein; hypothetical protein 744704 5610036 Ssed_0615 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472355.1 744417 D 425104 CDS YP_001472356.1 157373756 5610037 744827..746014 1 NC_009831.1 KEGG: shn:Shewana3_0565 hypothetical protein; hypothetical protein 746014 5610037 Ssed_0616 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472356.1 744827 D 425104 CDS YP_001472357.1 157373757 5612086 745998..746912 1 NC_009831.1 KEGG: sbl:Sbal_0527 periplasmic solute binding protein; periplasmic solute binding protein 746912 5612086 Ssed_0617 Shewanella sediminis HAW-EB3 periplasmic solute binding protein YP_001472357.1 745998 D 425104 CDS YP_001472358.1 157373758 5612087 746967..747827 1 NC_009831.1 KEGG: sbl:Sbal_0528 ABC-3 protein; ABC-3 protein 747827 5612087 Ssed_0618 Shewanella sediminis HAW-EB3 ABC-3 protein YP_001472358.1 746967 D 425104 CDS YP_001472359.1 157373759 5612088 748056..748778 1 NC_009831.1 KEGG: slo:Shew_0450 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acylglycerol-3-phosphate O-acyltransferase 748778 5612088 Ssed_0619 Shewanella sediminis HAW-EB3 1-acylglycerol-3-phosphate O-acyltransferase YP_001472359.1 748056 D 425104 CDS YP_001472360.1 157373760 5612089 748876..749304 1 NC_009831.1 KEGG: sfr:Sfri_3513 protein of unknown function DUF1260; hypothetical protein 749304 5612089 Ssed_0620 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472360.1 748876 D 425104 CDS YP_001472361.1 157373761 5610232 complement(749405..750376) 1 NC_009831.1 KEGG: slo:Shew_0452 diguanylate cyclase; diguanylate cyclase 750376 5610232 Ssed_0621 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001472361.1 749405 R 425104 CDS YP_001472362.1 157373762 5610233 complement(750391..751386) 1 NC_009831.1 KEGG: slo:Shew_0453 response regulator receiver protein; response regulator receiver protein 751386 5610233 Ssed_0622 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001472362.1 750391 R 425104 CDS YP_001472363.1 157373763 5610234 751797..752633 1 NC_009831.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 752633 5610234 Ssed_0623 Shewanella sediminis HAW-EB3 enoyl-CoA hydratase YP_001472363.1 751797 D 425104 CDS YP_001472364.1 157373764 5613036 complement(752949..753830) 1 NC_009831.1 KEGG: slo:Shew_0456 hypothetical protein; hypothetical protein 753830 5613036 Ssed_0624 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472364.1 752949 R 425104 CDS YP_001472365.1 157373765 5613037 complement(753945..756851) 1 NC_009831.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 756851 5613037 Ssed_0625 Shewanella sediminis HAW-EB3 ATP-dependent helicase HepA YP_001472365.1 753945 R 425104 CDS YP_001472366.1 157373766 5613038 757397..758791 1 NC_009831.1 KEGG: slo:Shew_0458 PhoH family protein; PhoH family protein 758791 5613038 Ssed_0626 Shewanella sediminis HAW-EB3 PhoH family protein YP_001472366.1 757397 D 425104 CDS YP_001472367.1 157373767 5613039 759500..763102 1 NC_009831.1 KEGG: slo:Shew_0459 PAS/PAC sensor hybrid histidine kinase; histidine kinase 763102 5613039 Ssed_0627 Shewanella sediminis HAW-EB3 histidine kinase YP_001472367.1 759500 D 425104 CDS YP_001472368.1 157373768 5609989 763415..765820 1 NC_009831.1 KEGG: slo:Shew_0460 hypothetical protein; hypothetical protein 765820 5609989 Ssed_0628 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472368.1 763415 D 425104 CDS YP_001472369.1 157373769 5609990 complement(766234..769320) 1 NC_009831.1 KEGG: slo:Shew_0466 acriflavin resistance protein; acriflavin resistance protein 769320 5609990 Ssed_0629 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001472369.1 766234 R 425104 CDS YP_001472370.1 157373770 5609991 complement(769654..770748) 1 NC_009831.1 KEGG: slo:Shew_0467 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 770748 5609991 Ssed_0630 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001472370.1 769654 R 425104 CDS YP_001472371.1 157373771 5610845 770994..771941 1 NC_009831.1 KEGG: slo:Shew_0468 transcriptional regulator, LysR family; carbonate dehydratase 771941 5610845 Ssed_0631 Shewanella sediminis HAW-EB3 carbonate dehydratase YP_001472371.1 770994 D 425104 CDS YP_001472372.1 157373772 5610846 complement(772074..772619) 1 NC_009831.1 KEGG: cps:CPS_3286 DNA-binding protein; DNA-binding protein 772619 5610846 Ssed_0632 Shewanella sediminis HAW-EB3 DNA-binding protein YP_001472372.1 772074 R 425104 CDS YP_001472373.1 157373773 5610847 772869..773036 1 NC_009831.1 KEGG: cps:CPS_3287 hypothetical protein; hypothetical protein 773036 5610847 Ssed_0633 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472373.1 772869 D 425104 CDS YP_001472374.1 157373774 5610848 773256..773678 1 NC_009831.1 hypothetical protein 773678 5610848 Ssed_0634 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472374.1 773256 D 425104 CDS YP_001472375.1 157373775 5611848 773868..774170 1 NC_009831.1 KEGG: slo:Shew_0462 hypothetical protein; hypothetical protein 774170 5611848 Ssed_0635 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472375.1 773868 D 425104 CDS YP_001472376.1 157373776 5611849 complement(774472..774825) 1 NC_009831.1 KEGG: slo:Shew_0463 hypothetical protein; hypothetical protein 774825 5611849 Ssed_0636 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472376.1 774472 R 425104 CDS YP_001472377.1 157373777 5611850 complement(774917..775411) 1 NC_009831.1 KEGG: slo:Shew_0464 hypothetical protein; hypothetical protein 775411 5611850 Ssed_0637 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472377.1 774917 R 425104 CDS YP_001472378.1 157373778 5613755 complement(775637..776035) 1 NC_009831.1 KEGG: slo:Shew_0465 hypothetical protein; hypothetical protein 776035 5613755 Ssed_0638 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472378.1 775637 R 425104 CDS YP_001472379.1 157373779 5613756 complement(776276..776932) 1 NC_009831.1 KEGG: ppr:PBPRB0125 hypothetical protein; hypothetical protein 776932 5613756 Ssed_0639 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472379.1 776276 R 425104 CDS YP_001472380.1 157373780 5613757 complement(776993..778357) 1 NC_009831.1 KEGG: slo:Shew_0470 MATE efflux family protein; MATE efflux family protein 778357 5613757 Ssed_0640 Shewanella sediminis HAW-EB3 MATE efflux family protein YP_001472380.1 776993 R 425104 CDS YP_001472381.1 157373781 5613758 778589..778879 1 NC_009831.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 778879 groES 5613758 groES Shewanella sediminis HAW-EB3 co-chaperonin GroES YP_001472381.1 778589 D 425104 CDS YP_001472382.1 157373782 5613544 778963..780612 1 NC_009831.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 780612 groEL 5613544 groEL Shewanella sediminis HAW-EB3 molecular chaperone GroEL YP_001472382.1 778963 D 425104 CDS YP_001472383.1 157373783 5613545 complement(781024..783369) 1 NC_009831.1 KEGG: shw:Sputw3181_1203 ATPase, possibly involved in inorganic ion transport; ATPase 783369 5613545 Ssed_0643 Shewanella sediminis HAW-EB3 ATPase YP_001472383.1 781024 R 425104 CDS YP_001472384.1 157373784 5613546 complement(783434..784201) 1 NC_009831.1 KEGG: pca:Pcar_1347 transposase InsF for insertion sequence IS3A/B/C/D/E/fA; transposase InsF for insertion sequence IS3A/B/C/D/E/fA 784201 5613546 Ssed_0644 Shewanella sediminis HAW-EB3 transposase InsF for insertion sequence IS3A/B/C/D/E/fA YP_001472384.1 783434 R 425104 CDS YP_001472385.1 157373785 5613735 complement(784291..784584) 1 NC_009831.1 KEGG: psa:PST_3402 ISxac3 transposase; ISxac3 transposase 784584 5613735 Ssed_0645 Shewanella sediminis HAW-EB3 ISxac3 transposase YP_001472385.1 784291 R 425104 CDS YP_001472386.1 157373786 5613736 complement(784628..784855) 1 NC_009831.1 KEGG: shw:Sputw3181_1203 ATPase, possibly involved in inorganic ion transport; ATPase 784855 5613736 Ssed_0646 Shewanella sediminis HAW-EB3 ATPase YP_001472386.1 784628 R 425104 CDS YP_001472387.1 157373787 5613737 complement(784917..785570) 1 NC_009831.1 KEGG: sfr:Sfri_3647 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 785570 5613737 Ssed_0647 Shewanella sediminis HAW-EB3 cold-shock DNA-binding domain-containing protein YP_001472387.1 784917 R 425104 CDS YP_001472388.1 157373788 5613738 785914..787092 1 NC_009831.1 KEGG: spc:Sputcn32_1267 AAA ATPase, central domain protein; ATPase central domain-containing protein 787092 5613738 Ssed_0648 Shewanella sediminis HAW-EB3 ATPase central domain-containing protein YP_001472388.1 785914 D 425104 CDS YP_001472389.1 157373789 5613254 787553..788209 1 NC_009831.1 KEGG: ppr:PBPRB0957 hypothetical protein; hypothetical protein 788209 5613254 Ssed_0649 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472389.1 787553 D 425104 CDS YP_001472390.1 157373790 5613255 788533..789171 1 NC_009831.1 KEGG: sdn:Sden_0897 hypothetical protein; hypothetical protein 789171 5613255 Ssed_0650 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472390.1 788533 D 425104 CDS YP_001472391.1 157373791 5613256 789408..792611 1 NC_009831.1 KEGG: slo:Shew_3366 metal dependent phosphohydrolase; metal dependent phosphohydrolase 792611 5613256 Ssed_0651 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001472391.1 789408 D 425104 CDS YP_001472392.1 157373792 5613457 complement(793053..793304) 1 NC_009831.1 hypothetical protein 793304 5613457 Ssed_0652 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472392.1 793053 R 425104 CDS YP_001472393.1 157373793 5613458 complement(793451..794290) 1 NC_009831.1 KEGG: tde:TDE0675 hypothetical protein; hypothetical protein 794290 5613458 Ssed_0653 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472393.1 793451 R 425104 CDS YP_001472394.1 157373794 5613459 complement(794301..795107) 1 NC_009831.1 KEGG: tde:TDE0674 hypothetical protein; hypothetical protein 795107 5613459 Ssed_0654 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472394.1 794301 R 425104 CDS YP_001472395.1 157373795 5613460 complement(795270..796106) 1 NC_009831.1 KEGG: swi:Swit_3244 metal dependent phosphohydrolase; metal dependent phosphohydrolase 796106 5613460 Ssed_0655 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001472395.1 795270 R 425104 CDS YP_001472396.1 157373796 5613197 complement(796208..797113) 1 NC_009831.1 KEGG: swi:Swit_3244 metal dependent phosphohydrolase; metal dependent phosphohydrolase 797113 5613197 Ssed_0656 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001472396.1 796208 R 425104 CDS YP_001472397.1 157373797 5613198 complement(797161..797769) 1 NC_009831.1 KEGG: asa:ASA_3393 short-chain dehydrogenase/reductase; short chain dehydrogenase 797769 5613198 Ssed_0657 Shewanella sediminis HAW-EB3 short chain dehydrogenase YP_001472397.1 797161 R 425104 CDS YP_001472398.1 157373798 5613199 797868..798773 1 NC_009831.1 KEGG: aha:AHA_0900 transcriptional regulator, LysR family; LysR family transcriptional regulator 798773 5613199 Ssed_0658 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472398.1 797868 D 425104 CDS YP_001472399.1 157373799 5612950 799099..799503 1 NC_009831.1 KEGG: slo:Shew_0481 hypothetical protein; hypothetical protein 799503 5612950 Ssed_0659 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472399.1 799099 D 425104 CDS YP_001472400.1 157373800 5612951 799872..801038 1 NC_009831.1 KEGG: slo:Shew_0482 hypothetical protein; hypothetical protein 801038 5612951 Ssed_0660 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472400.1 799872 D 425104 CDS YP_001472401.1 157373801 5612952 801041..801862 1 NC_009831.1 KEGG: sfr:Sfri_2137 hypothetical protein; hypothetical protein 801862 5612952 Ssed_0661 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472401.1 801041 D 425104 CDS YP_001472402.1 157373802 5612953 complement(801920..802207) 1 NC_009831.1 KEGG: sfr:Sfri_3652 hypothetical protein; hypothetical protein 802207 5612953 Ssed_0662 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472402.1 801920 R 425104 CDS YP_001472403.1 157373803 5613117 complement(802516..804519) 1 NC_009831.1 KEGG: rme:Rmet_5402 beta-lactamase-like protein; beta-lactamase-like protein 804519 5613117 Ssed_0663 Shewanella sediminis HAW-EB3 beta-lactamase-like protein YP_001472403.1 802516 R 425104 CDS YP_001472404.1 157373804 5613118 complement(804844..806475) 1 NC_009831.1 KEGG: pat:Patl_1052 periplasmic sensor signal transduction histidine kinase; Signal transduction histidine kinase-like protein 806475 5613118 Ssed_0664 Shewanella sediminis HAW-EB3 Signal transduction histidine kinase-like protein YP_001472404.1 804844 R 425104 CDS YP_001472405.1 157373805 5613119 807005..807337 1 NC_009831.1 KEGG: cac:CAC2107 contains cell adhesion domain; hypothetical protein 807337 5613119 Ssed_0666 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472405.1 807005 D 425104 CDS YP_001472406.1 157373806 5612938 807334..808557 1 NC_009831.1 hypothetical protein 808557 5612938 Ssed_0667 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472406.1 807334 D 425104 CDS YP_001472407.1 157373807 5612939 complement(809009..810172) 1 NC_009831.1 KEGG: ppr:PBPRB1046 hypothetical MFS transporter; MFS transporter 810172 5612939 Ssed_0668 Shewanella sediminis HAW-EB3 MFS transporter YP_001472407.1 809009 R 425104 CDS YP_001472408.1 157373808 5612940 complement(810236..810403) 1 NC_009831.1 KEGG: vvy:VVA1599 dehydrogenase; dehydrogenase 810403 5612940 Ssed_0669 Shewanella sediminis HAW-EB3 dehydrogenase YP_001472408.1 810236 R 425104 CDS YP_001472409.1 157373809 5612941 810677..811615 1 NC_009831.1 KEGG: ppr:PBPRB1044 transcriptional regulator, LysR family; LysR family transcriptional regulator 811615 5612941 Ssed_0670 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472409.1 810677 D 425104 CDS YP_001472410.1 157373810 5612523 complement(811748..812926) 1 NC_009831.1 KEGG: rrs:RoseRS_2460 NAD/NADP octopine/nopaline dehydrogenase; hypothetical protein 812926 5612523 Ssed_0671 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472410.1 811748 R 425104 CDS YP_001472411.1 157373811 5612524 complement(813276..813983) 1 NC_009831.1 KEGG: sdn:Sden_1130 NADH dehydrogenase with NAD(P)-binding domain; NADH dehydrogenase 813983 5612524 Ssed_0672 Shewanella sediminis HAW-EB3 NADH dehydrogenase YP_001472411.1 813276 R 425104 CDS YP_001472412.1 157373812 5612525 complement(814260..814511) 1 NC_009831.1 KEGG: slo:Shew_0491 hypothetical protein; hypothetical protein 814511 5612525 Ssed_0673 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472412.1 814260 R 425104 CDS YP_001472413.1 157373813 5612824 814742..815125 1 NC_009831.1 KEGG: pat:Patl_2878 hypothetical protein; hypothetical protein 815125 5612824 Ssed_0674 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472413.1 814742 D 425104 CDS YP_001472414.1 157373814 5612825 complement(815282..815836) 1 NC_009831.1 KEGG: son:SO3974 hypothetical protein; hypothetical protein 815836 5612825 Ssed_0675 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472414.1 815282 R 425104 CDS YP_001472415.1 157373815 5612826 816689..817777 1 NC_009831.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 817777 5612826 Ssed_0676 Shewanella sediminis HAW-EB3 cysteine synthase A YP_001472415.1 816689 D 425104 CDS YP_001472416.1 157373816 5612827 complement(817848..818732) 1 NC_009831.1 KEGG: vpa:VPA0175 transcriptional regulator, LysR family; LysR family transcriptional regulator 818732 5612827 Ssed_0677 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472416.1 817848 R 425104 CDS YP_001472417.1 157373817 5612458 818868..819392 1 NC_009831.1 KEGG: saz:Sama_0275 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 819392 5612458 Ssed_0678 Shewanella sediminis HAW-EB3 glyoxalase/bleomycin resistance protein/dioxygenase YP_001472417.1 818868 D 425104 CDS YP_001472418.1 157373818 5612459 complement(819464..820942) 1 NC_009831.1 KEGG: slo:Shew_0699 Na+/H+ antiporter; Na+/H+ antiporter 820942 5612459 Ssed_0679 Shewanella sediminis HAW-EB3 Na+/H+ antiporter YP_001472418.1 819464 R 425104 CDS YP_001472419.1 157373819 5612460 821265..821756 1 NC_009831.1 KEGG: sfr:Sfri_3604 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 821756 5612460 Ssed_0680 Shewanella sediminis HAW-EB3 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001472419.1 821265 D 425104 CDS YP_001472420.1 157373820 5612509 complement(821871..822764) 1 NC_009831.1 KEGG: saz:Sama_2893 phospholipase A(1); phospholipase A(1) 822764 5612509 Ssed_0681 Shewanella sediminis HAW-EB3 phospholipase A(1) YP_001472420.1 821871 R 425104 CDS YP_001472421.1 157373821 5612510 complement(823041..823940) 1 NC_009831.1 KEGG: slo:Shew_3337 protein of unknown function DUF6, transmembrane; hypothetical protein 823940 5612510 Ssed_0682 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472421.1 823041 R 425104 CDS YP_001472422.1 157373822 5612511 824164..824667 1 NC_009831.1 KEGG: sfr:Sfri_3643 transcriptional regulator, MarR family protein; MarR family transcriptional regulator 824667 5612511 Ssed_0683 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001472422.1 824164 D 425104 CDS YP_001472423.1 157373823 5612512 824831..825226 1 NC_009831.1 KEGG: gsu:GSU1286 chemotaxis protein CheY; chemotaxis protein CheY 825226 5612512 Ssed_0684 Shewanella sediminis HAW-EB3 chemotaxis protein CheY YP_001472423.1 824831 D 425104 CDS YP_001472424.1 157373824 5612439 825385..826449 1 NC_009831.1 KEGG: spc:Sputcn32_0144 hypothetical protein; hypothetical protein 826449 5612439 Ssed_0685 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472424.1 825385 D 425104 CDS YP_001472425.1 157373825 5612440 826650..827111 1 NC_009831.1 KEGG: slo:Shew_0296 heat shock protein HSP20; heat shock protein Hsp20 827111 5612440 Ssed_0686 Shewanella sediminis HAW-EB3 heat shock protein Hsp20 YP_001472425.1 826650 D 425104 CDS YP_001472426.1 157373826 5612441 827789..829000 1 NC_009831.1 KEGG: slo:Shew_0504 NnrS family protein; NnrS family protein 829000 5612441 Ssed_0687 Shewanella sediminis HAW-EB3 NnrS family protein YP_001472426.1 827789 D 425104 CDS YP_001472427.1 157373827 5612265 829072..830466 1 NC_009831.1 KEGG: slo:Shew_0505 nitrite reductase (cytochrome; ammonia-forming); nitrite reductase 830466 5612265 Ssed_0688 Shewanella sediminis HAW-EB3 nitrite reductase YP_001472427.1 829072 D 425104 CDS YP_001472428.1 157373828 5612266 complement(830658..831827) 1 NC_009831.1 KEGG: pha:PSHAa1259 transport protein of the major facilitator; transport protein of the major facilitator 831827 5612266 Ssed_0689 Shewanella sediminis HAW-EB3 transport protein of the major facilitator YP_001472428.1 830658 R 425104 CDS YP_001472429.1 157373829 5612267 832686..833444 1 NC_009831.1 KEGG: son:SO4624 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 833444 5612267 Ssed_0690 Shewanella sediminis HAW-EB3 LuxR family transcriptional regulator YP_001472429.1 832686 D 425104 CDS YP_001472430.1 157373830 5612268 833448..834122 1 NC_009831.1 KEGG: spc:Sputcn32_3798 two component transcriptional regulator, winged helix family; two component transcriptional regulator 834122 5612268 Ssed_0691 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001472430.1 833448 D 425104 CDS YP_001472431.1 157373831 5612407 834112..835326 1 NC_009831.1 KEGG: shn:Shewana3_4006 histidine kinase A domain protein domain protein; histidine kinase A domain-containing protein 835326 5612407 Ssed_0692 Shewanella sediminis HAW-EB3 histidine kinase A domain-containing protein YP_001472431.1 834112 D 425104 CDS YP_001472432.1 157373832 5612408 835800..836546 1 NC_009831.1 KEGG: son:SO4621 hypothetical protein; hypothetical protein 836546 5612408 Ssed_0693 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472432.1 835800 D 425104 CDS YP_001472433.1 157373833 5612409 836576..838330 1 NC_009831.1 KEGG: son:SO4620 fumarate reductase, flavoprotein subunit precursor; fumarate reductase, flavoprotein subunit 838330 5612409 Ssed_0694 Shewanella sediminis HAW-EB3 fumarate reductase, flavoprotein subunit YP_001472433.1 836576 D 425104 CDS YP_001472434.1 157373834 5612209 838408..839421 1 NC_009831.1 KEGG: sdn:Sden_0988 ApbE-like lipoprotein; ApbE-like lipoprotein 839421 5612209 Ssed_0695 Shewanella sediminis HAW-EB3 ApbE-like lipoprotein YP_001472434.1 838408 D 425104 CDS YP_001472435.1 157373835 5612210 complement(839661..839984) 1 NC_009831.1 hypothetical protein 839984 5612210 Ssed_0696 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472435.1 839661 R 425104 CDS YP_001472436.1 157373836 5612211 840563..841399 1 NC_009831.1 KEGG: dvl:Dvul_0589 phosphate binding protein; phosphate binding protein 841399 5612211 Ssed_0697 Shewanella sediminis HAW-EB3 phosphate binding protein YP_001472436.1 840563 D 425104 CDS YP_001472437.1 157373837 5612212 841446..842324 1 NC_009831.1 KEGG: lip:LI1029 phosphate transporter permease PstC; phosphate transporter permease PstC 842324 5612212 Ssed_0698 Shewanella sediminis HAW-EB3 phosphate transporter permease PstC YP_001472437.1 841446 D 425104 CDS YP_001472438.1 157373838 5612244 842321..843217 1 NC_009831.1 KEGG: dvl:Dvul_0591 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 843217 5612244 Ssed_0699 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001472438.1 842321 D 425104 CDS YP_001472439.1 157373839 5612245 843211..843936 1 NC_009831.1 KEGG: sfu:Sfum_0283 ABC transporter related; ABC transporter 843936 5612245 Ssed_0700 Shewanella sediminis HAW-EB3 ABC transporter YP_001472439.1 843211 D 425104 CDS YP_001472440.1 157373840 5612246 844287..845324 1 NC_009831.1 KEGG: pmy:Pmen_4369 helix-turn-helix-domain containing protein, AraC type; helix-turn-helix-domain-containing protein 845324 5612246 Ssed_0701 Shewanella sediminis HAW-EB3 helix-turn-helix-domain-containing protein YP_001472440.1 844287 D 425104 CDS YP_001472441.1 157373841 5612205 845421..847442 1 NC_009831.1 KEGG: pfo:Pfl_2280 beta-lactamase-like; beta-lactamase-like protein 847442 5612205 Ssed_0702 Shewanella sediminis HAW-EB3 beta-lactamase-like protein YP_001472441.1 845421 D 425104 CDS YP_001472442.1 157373842 5612206 847686..849062 1 NC_009831.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 849062 fumC 5612206 fumC Shewanella sediminis HAW-EB3 fumarate hydratase YP_001472442.1 847686 D 425104 CDS YP_001472443.1 157373843 5612207 complement(849115..850206) 1 NC_009831.1 KEGG: sbl:Sbal_2332 hypothetical protein; hypothetical protein 850206 5612207 Ssed_0704 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472443.1 849115 R 425104 CDS YP_001472444.1 157373844 5612208 850305..850883 1 NC_009831.1 KEGG: slo:Shew_3323 lipase-like; lipase-like protein 850883 5612208 Ssed_0705 Shewanella sediminis HAW-EB3 lipase-like protein YP_001472444.1 850305 D 425104 CDS YP_001472445.1 157373845 5612071 complement(850989..851918) 1 NC_009831.1 KEGG: slo:Shew_3322 RarD protein, DMT superfamily transporter; transporter DMT superfamily protein 851918 5612071 Ssed_0706 Shewanella sediminis HAW-EB3 transporter DMT superfamily protein YP_001472445.1 850989 R 425104 CDS YP_001472446.1 157373846 5612072 852274..853815 1 NC_009831.1 KEGG: cps:CPS_0069 FG-GAP repeat lipoprotein; FG-GAP repeat-containing protein 853815 5612072 Ssed_0707 Shewanella sediminis HAW-EB3 FG-GAP repeat-containing protein YP_001472446.1 852274 D 425104 CDS YP_001472447.1 157373847 5612073 854106..855473 1 NC_009831.1 KEGG: sfr:Sfri_3720 hypothetical protein; hypothetical protein 855473 5612073 Ssed_0708 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472447.1 854106 D 425104 CDS YP_001472448.1 157373848 5611969 complement(855530..856495) 1 NC_009831.1 KEGG: ppr:PBPRA0683 hypothetical protein; hypothetical protein 856495 5611969 Ssed_0709 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472448.1 855530 R 425104 CDS YP_001472449.1 157373849 5611970 856652..857467 1 NC_009831.1 KEGG: vpa:VP1267 lipoprotein; hypothetical protein 857467 5611970 Ssed_0710 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472449.1 856652 D 425104 CDS YP_001472450.1 157373850 5611971 complement(857531..858799) 1 NC_009831.1 KEGG: slo:Shew_3318 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 858799 5611971 Ssed_0711 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001472450.1 857531 R 425104 CDS YP_001472451.1 157373851 5611972 complement(858799..859485) 1 NC_009831.1 KEGG: slo:Shew_3317 two component transcriptional regulator, winged helix family; two component transcriptional regulator 859485 5611972 Ssed_0712 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001472451.1 858799 R 425104 CDS YP_001472452.1 157373852 5611999 859613..860644 1 NC_009831.1 KEGG: ppr:PBPRB0750 hypothetical glycosyl transferase; glycosyl transferase family protein 860644 5611999 Ssed_0713 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001472452.1 859613 D 425104 CDS YP_001472453.1 157373853 5612000 860641..862035 1 NC_009831.1 KEGG: ppr:PBPRB0751 hypothetical protein; hypothetical protein 862035 5612000 Ssed_0714 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472453.1 860641 D 425104 CDS YP_001472454.1 157373854 5612001 862023..862451 1 NC_009831.1 KEGG: cps:CPS_1862 hypothetical protein; hypothetical protein 862451 5612001 Ssed_0715 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472454.1 862023 D 425104 CDS YP_001472455.1 157373855 5611877 862607..863287 1 NC_009831.1 KEGG: slo:Shew_0908 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 863287 5611877 Ssed_0716 Shewanella sediminis HAW-EB3 OmpA/MotB domain-containing protein YP_001472455.1 862607 D 425104 CDS YP_001472456.1 157373856 5611878 864406..864840 1 NC_009831.1 hypothetical protein 864840 5611878 Ssed_0717 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472456.1 864406 D 425104 CDS YP_001472457.1 157373857 5611879 864928..865251 1 NC_009831.1 KEGG: ana:all3436 hypothetical protein; hypothetical protein 865251 5611879 Ssed_0718 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472457.1 864928 D 425104 CDS YP_001472458.1 157373858 5611880 865305..865781 1 NC_009831.1 hypothetical protein 865781 5611880 Ssed_0719 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472458.1 865305 D 425104 CDS YP_001472459.1 157373859 5611962 866179..866586 1 NC_009831.1 KEGG: sde:Sde_3085 response regulator receiver domain protein (CheY-like); hypothetical protein 866586 5611962 Ssed_0720 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472459.1 866179 D 425104 CDS YP_001472460.1 157373860 5611963 complement(867061..868425) 1 NC_009831.1 KEGG: slo:Shew_3316 magnesium transporter; magnesium transporter 868425 5611963 Ssed_0721 Shewanella sediminis HAW-EB3 magnesium transporter YP_001472460.1 867061 R 425104 CDS YP_001472461.1 157373861 5611964 complement(868538..868813) 1 NC_009831.1 KEGG: son:SO3965 phosphocarrier protein NPR; phosphocarrier protein NPR 868813 5611964 Ssed_0722 Shewanella sediminis HAW-EB3 phosphocarrier protein NPR YP_001472461.1 868538 R 425104 CDS YP_001472462.1 157373862 5611799 complement(868806..869654) 1 NC_009831.1 KEGG: slo:Shew_3314 uncharacterized P-loop ATPase UPF0042; hypothetical protein 869654 5611799 Ssed_0723 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472462.1 868806 R 425104 CDS YP_001472463.1 157373863 5611800 complement(869651..870094) 1 NC_009831.1 KEGG: slo:Shew_3313 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 870094 5611800 Ssed_0724 Shewanella sediminis HAW-EB3 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001472463.1 869651 R 425104 CDS YP_001472464.1 157373864 5611801 complement(870097..870384) 1 NC_009831.1 KEGG: slo:Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 870384 5611801 Ssed_0725 Shewanella sediminis HAW-EB3 sigma 54 modulation protein/ribosomal protein S30EA YP_001472464.1 870097 R 425104 CDS YP_001472465.1 157373865 5611802 complement(870451..871944) 1 NC_009831.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 871944 5611802 Ssed_0726 Shewanella sediminis HAW-EB3 RNA polymerase factor sigma-54 YP_001472465.1 870451 R 425104 CDS YP_001472466.1 157373866 5611771 complement(872085..872816) 1 NC_009831.1 KEGG: slo:Shew_3310 ABC transporter-related protein; ABC transporter-like protein 872816 5611771 Ssed_0727 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001472466.1 872085 R 425104 CDS YP_001472467.1 157373867 5611772 complement(872813..873466) 1 NC_009831.1 KEGG: slo:Shew_3309 OstA family protein; OstA family protein 873466 5611772 Ssed_0728 Shewanella sediminis HAW-EB3 OstA family protein YP_001472467.1 872813 R 425104 CDS YP_001472468.1 157373868 5611773 complement(873453..874010) 1 NC_009831.1 KEGG: slo:Shew_3308 protein of unknown function DUF1239; hypothetical protein 874010 5611773 Ssed_0729 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472468.1 873453 R 425104 CDS YP_001472469.1 157373869 5611673 complement(874007..874558) 1 NC_009831.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 874558 5611673 Ssed_0730 Shewanella sediminis HAW-EB3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001472469.1 874007 R 425104 CDS YP_001472470.1 157373870 5611674 complement(874646..875623) 1 NC_009831.1 KEGG: slo:Shew_3306 KpsF/GutQ family protein; arabinose-5-phosphate isomerase 875623 5611674 Ssed_0731 Shewanella sediminis HAW-EB3 arabinose-5-phosphate isomerase YP_001472470.1 874646 R 425104 CDS YP_001472471.1 157373871 5611675 complement(875663..876622) 1 NC_009831.1 KEGG: slo:Shew_3305 Na+/Ca+ antiporter, CaCA family; CaCA family Na(+)/Ca(+) antiporter 876622 5611675 Ssed_0732 Shewanella sediminis HAW-EB3 CaCA family Na(+)/Ca(+) antiporter YP_001472471.1 875663 R 425104 CDS YP_001472472.1 157373872 5611676 876900..877703 1 NC_009831.1 KEGG: slo:Shew_3304 ABC transporter-related protein; ABC transporter-like protein 877703 5611676 Ssed_0733 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001472472.1 876900 D 425104 CDS YP_001472473.1 157373873 5610999 877768..878550 1 NC_009831.1 KEGG: slo:Shew_3303 protein of unknown function DUF140; hypothetical protein 878550 5610999 Ssed_0734 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472473.1 877768 D 425104 CDS YP_001472474.1 157373874 5611000 878607..879077 1 NC_009831.1 KEGG: slo:Shew_3302 mammalian cell entry related domain protein; hypothetical protein 879077 5611000 Ssed_0735 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472474.1 878607 D 425104 CDS YP_001472475.1 157373875 5611001 879081..879743 1 NC_009831.1 KEGG: shw:Sputw3181_3449 toluene tolerance family protein; toluene tolerance family protein 879743 5611001 Ssed_0736 Shewanella sediminis HAW-EB3 toluene tolerance family protein YP_001472475.1 879081 D 425104 CDS YP_001472476.1 157373876 5611683 879744..880046 1 NC_009831.1 KEGG: shw:Sputw3181_3448 SpoIIAA family protein; SpoIIAA family protein 880046 5611683 Ssed_0737 Shewanella sediminis HAW-EB3 SpoIIAA family protein YP_001472476.1 879744 D 425104 CDS YP_001472477.1 157373877 5611684 880051..880341 1 NC_009831.1 KEGG: slo:Shew_3299 BolA family protein; BolA family protein 880341 5611684 Ssed_0738 Shewanella sediminis HAW-EB3 BolA family protein YP_001472477.1 880051 D 425104 CDS YP_001472478.1 157373878 5611685 880355..881614 1 NC_009831.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 881614 5611685 Ssed_0739 Shewanella sediminis HAW-EB3 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001472478.1 880355 D 425104 CDS YP_001472479.1 157373879 5611686 881831..883243 1 NC_009831.1 KEGG: chy:CHY_1856 sensor histidine kinase; Signal transduction histidine kinase-like protein 883243 5611686 Ssed_0740 Shewanella sediminis HAW-EB3 Signal transduction histidine kinase-like protein YP_001472479.1 881831 D 425104 CDS YP_001472480.1 157373880 5611006 883418..884050 1 NC_009831.1 KEGG: mgm:Mmc1_3443 response regulator receiver protein; response regulator receiver protein 884050 5611006 Ssed_0741 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001472480.1 883418 D 425104 CDS YP_001472481.1 157373881 5611007 884247..885938 1 NC_009831.1 KEGG: sus:Acid_7220 cytochrome c family protein; hypothetical protein 885938 5611007 Ssed_0742 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472481.1 884247 D 425104 CDS YP_001472482.1 157373882 5611008 complement(886579..887664) 1 NC_009831.1 KEGG: slo:Shew_3297 periplasmic serine protease DegS; 2-alkenal reductase 887664 5611008 Ssed_0743 Shewanella sediminis HAW-EB3 2-alkenal reductase YP_001472482.1 886579 R 425104 CDS YP_001472483.1 157373883 5613246 complement(887802..889154) 1 NC_009831.1 KEGG: slo:Shew_3296 protease Do; 2-alkenal reductase 889154 5613246 Ssed_0744 Shewanella sediminis HAW-EB3 2-alkenal reductase YP_001472483.1 887802 R 425104 CDS YP_001472484.1 157373884 5613247 complement(889308..889682) 1 NC_009831.1 hypothetical protein 889682 5613247 Ssed_0745 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472484.1 889308 R 425104 CDS YP_001472485.1 157373885 5613248 889873..890979 1 NC_009831.1 KEGG: slo:Shew_3295 AFG1-family ATPase; AFG1 family ATPase 890979 5613248 Ssed_0746 Shewanella sediminis HAW-EB3 AFG1 family ATPase YP_001472485.1 889873 D 425104 CDS YP_001472486.1 157373886 5613249 891234..891665 1 NC_009831.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 891665 rplM 5613249 rplM Shewanella sediminis HAW-EB3 50S ribosomal protein L13 YP_001472486.1 891234 D 425104 CDS YP_001472487.1 157373887 5611186 891680..892072 1 NC_009831.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 892072 rpsI 5611186 rpsI Shewanella sediminis HAW-EB3 30S ribosomal protein S9 YP_001472487.1 891680 D 425104 CDS YP_001472488.1 157373888 5611187 892237..892407 1 NC_009831.1 KEGG: slo:Shew_3292 hypothetical protein; hypothetical protein 892407 5611187 Ssed_0749 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472488.1 892237 D 425104 CDS YP_001472489.1 157373889 5611188 892474..893769 1 NC_009831.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 893769 5611188 Ssed_0750 Shewanella sediminis HAW-EB3 adenylosuccinate synthetase YP_001472489.1 892474 D 425104 CDS YP_001472490.1 157373890 5611050 893925..894608 1 NC_009831.1 KEGG: slo:Shew_3290 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 894608 5611050 Ssed_0751 Shewanella sediminis HAW-EB3 Sel1 domain-containing protein YP_001472490.1 893925 D 425104 CDS YP_001472491.1 157373891 5611051 894661..897162 1 NC_009831.1 KEGG: slo:Shew_3289 ribonuclease R; exoribonuclease II 897162 5611051 Ssed_0752 Shewanella sediminis HAW-EB3 exoribonuclease II YP_001472491.1 894661 D 425104 CDS YP_001472492.1 157373892 5611052 897159..897899 1 NC_009831.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 897899 5611052 Ssed_0753 Shewanella sediminis HAW-EB3 23S rRNA (guanosine-2'-O-)-methyltransferase YP_001472492.1 897159 D 425104 CDS YP_001472493.1 157373893 5611053 898493..900385 1 NC_009831.1 hypothetical protein 900385 5611053 Ssed_0754 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472493.1 898493 D 425104 CDS YP_001472494.1 157373894 5611020 900463..901212 1 NC_009831.1 KEGG: shn:Shewana3_4008 transcriptional regulator, LuxR family; hypothetical protein 901212 5611020 Ssed_0755 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472494.1 900463 D 425104 CDS YP_001472495.1 157373895 5611021 complement(901588..902337) 1 NC_009831.1 KEGG: slo:Shew_3285 protein of unknown function DUF481; hypothetical protein 902337 5611021 Ssed_0756 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472495.1 901588 R 425104 CDS YP_001472496.1 157373896 5611022 902570..902989 1 NC_009831.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 902989 rpsF 5611022 rpsF Shewanella sediminis HAW-EB3 30S ribosomal protein S6 YP_001472496.1 902570 D 425104 CDS YP_001472497.1 157373897 5611095 902998..903303 1 NC_009831.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 903303 5611095 Ssed_0758 Shewanella sediminis HAW-EB3 primosomal replication protein N YP_001472497.1 902998 D 425104 CDS YP_001472498.1 157373898 5611096 903315..903542 1 NC_009831.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 903542 rpsR 5611096 rpsR Shewanella sediminis HAW-EB3 30S ribosomal protein S18 YP_001472498.1 903315 D 425104 CDS YP_001472499.1 157373899 5611097 903570..904022 1 NC_009831.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 904022 rplI 5611097 rplI Shewanella sediminis HAW-EB3 50S ribosomal protein L9 YP_001472499.1 903570 D 425104 CDS YP_001472500.1 157373900 5611098 complement(904815..907037) 1 NC_009831.1 KEGG: slo:Shew_3279 hypothetical protein; hypothetical protein 907037 5611098 Ssed_0761 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472500.1 904815 R 425104 CDS YP_001472501.1 157373901 5611017 907145..908551 1 NC_009831.1 KEGG: slo:Shew_3278 replicative DNA helicase; replicative DNA helicase 908551 5611017 Ssed_0762 Shewanella sediminis HAW-EB3 replicative DNA helicase YP_001472501.1 907145 D 425104 CDS YP_001472502.1 157373902 5611018 908755..909831 1 NC_009831.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 909831 alr 5611018 alr Shewanella sediminis HAW-EB3 alanine racemase YP_001472502.1 908755 D 425104 CDS YP_001472503.1 157373903 5611019 909917..911269 1 NC_009831.1 KEGG: slo:Shew_3276 hypothetical protein; hypothetical protein 911269 5611019 Ssed_0764 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472503.1 909917 D 425104 CDS YP_001472504.1 157373904 5611235 complement(911367..911831) 1 NC_009831.1 KEGG: sbl:Sbal_3636 chemotaxis protein CheX; chemotaxis protein CheX 911831 5611235 Ssed_0765 Shewanella sediminis HAW-EB3 chemotaxis protein CheX YP_001472504.1 911367 R 425104 CDS YP_001472505.1 157373905 5611236 912454..913437 1 NC_009831.1 KEGG: slo:Shew_0536 TIM-barrel protein, YjbN family; tRNA-dihydrouridine synthase A 913437 5611236 Ssed_0766 Shewanella sediminis HAW-EB3 tRNA-dihydrouridine synthase A YP_001472505.1 912454 D 425104 CDS YP_001472506.1 157373906 5611237 913721..914017 1 NC_009831.1 KEGG: slo:Shew_0537 hypothetical protein; hypothetical protein 914017 5611237 Ssed_0767 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472506.1 913721 D 425104 CDS YP_001472507.1 157373907 5611238 914168..914386 1 NC_009831.1 KEGG: slo:Shew_0538 phage shock protein C, PspC; phage shock protein C, PspC 914386 5611238 Ssed_0768 Shewanella sediminis HAW-EB3 phage shock protein C, PspC YP_001472507.1 914168 D 425104 CDS YP_001472508.1 157373908 5611279 914407..914760 1 NC_009831.1 KEGG: slo:Shew_0539 hypothetical protein; hypothetical protein 914760 5611279 Ssed_0769 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472508.1 914407 D 425104 CDS YP_001472509.1 157373909 5611280 complement(914823..915563) 1 NC_009831.1 KEGG: shn:Shewana3_0721 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 915563 5611280 Ssed_0770 Shewanella sediminis HAW-EB3 enoyl-CoA hydratase/isomerase YP_001472509.1 914823 R 425104 CDS YP_001472510.1 157373910 5611281 915596..916072 1 NC_009831.1 KEGG: she:Shewmr4_3239 protein of unknown function DUF461; hypothetical protein 916072 5611281 Ssed_0771 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472510.1 915596 D 425104 CDS YP_001472511.1 157373911 5614045 916111..917082 1 NC_009831.1 KEGG: slo:Shew_0542 hypothetical protein; hypothetical protein 917082 5614045 Ssed_0772 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472511.1 916111 D 425104 CDS YP_001472512.1 157373912 5614046 917090..917854 1 NC_009831.1 KEGG: slo:Shew_0543 hypothetical protein; hypothetical protein 917854 5614046 Ssed_0773 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472512.1 917090 D 425104 CDS YP_001472513.1 157373913 5614047 complement(917989..919314) 1 NC_009831.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 919314 tolC 5614047 tolC Shewanella sediminis HAW-EB3 outer membrane channel protein YP_001472513.1 917989 R 425104 CDS YP_001472514.1 157373914 5614048 919626..920240 1 NC_009831.1 KEGG: slo:Shew_0545 ADP-ribose diphosphatase; ADP-ribose diphosphatase 920240 5614048 Ssed_0775 Shewanella sediminis HAW-EB3 ADP-ribose diphosphatase YP_001472514.1 919626 D 425104 CDS YP_001472515.1 157373915 5611359 920297..920746 1 NC_009831.1 KEGG: slo:Shew_0546 protein of unknown function DUF1249; hypothetical protein 920746 5611359 Ssed_0776 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472515.1 920297 D 425104 CDS YP_001472516.1 157373916 5611360 920756..921595 1 NC_009831.1 KEGG: slo:Shew_0547 calcineurin phosphoesterase C-terminal domain protein; calcineurin phosphoesterase C-terminal domain-containing protein 921595 5611360 Ssed_0777 Shewanella sediminis HAW-EB3 calcineurin phosphoesterase C-terminal domain-containing protein YP_001472516.1 920756 D 425104 CDS YP_001472517.1 157373917 5611361 921828..922406 1 NC_009831.1 KEGG: slo:Shew_0548 protein of unknown function UPF0227; hypothetical protein 922406 5611361 Ssed_0778 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472517.1 921828 D 425104 CDS YP_001472518.1 157373918 5611373 922455..924341 1 NC_009831.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 924341 5611373 Ssed_0779 Shewanella sediminis HAW-EB3 DNA topoisomerase IV subunit B YP_001472518.1 922455 D 425104 CDS YP_001472519.1 157373919 5611374 924653..925816 1 NC_009831.1 KEGG: slo:Shew_0550 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 925816 5611374 Ssed_0780 Shewanella sediminis HAW-EB3 L-sorbosone dehydrogenase YP_001472519.1 924653 D 425104 CDS YP_001472520.1 157373920 5611375 925813..928086 1 NC_009831.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 928086 5611375 Ssed_0781 Shewanella sediminis HAW-EB3 DNA topoisomerase IV subunit A YP_001472520.1 925813 D 425104 CDS YP_001472521.1 157373921 5611376 complement(928175..928366) 1 NC_009831.1 KEGG: shn:Shewana3_0581 BFD domain protein (2Fe-2S)-binding domain protein; BFD/(2Fe-2S)-binding domain-containing protein 928366 5611376 Ssed_0782 Shewanella sediminis HAW-EB3 BFD/(2Fe-2S)-binding domain-containing protein YP_001472521.1 928175 R 425104 CDS YP_001472522.1 157373922 5609891 complement(928604..929530) 1 NC_009831.1 KEGG: slo:Shew_0553 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 929530 5609891 Ssed_0783 Shewanella sediminis HAW-EB3 D-isomer specific 2-hydroxyacid dehydrogenase YP_001472522.1 928604 R 425104 CDS YP_001472523.1 157373923 5609892 929565..929909 1 NC_009831.1 KEGG: sbl:Sbal_0545 hypothetical protein; hypothetical protein 929909 5609892 Ssed_0784 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472523.1 929565 D 425104 CDS YP_001472524.1 157373924 5609893 complement(930068..930763) 1 NC_009831.1 KEGG: slo:Shew_0554 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 930763 5609893 Ssed_0785 Shewanella sediminis HAW-EB3 glycerophosphoryl diester phosphodiesterase YP_001472524.1 930068 R 425104 CDS YP_001472525.1 157373925 5609917 complement(930763..933963) 1 NC_009831.1 KEGG: slo:Shew_0555 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 933963 5609917 Ssed_0786 Shewanella sediminis HAW-EB3 mechanosensitive ion channel protein MscS YP_001472525.1 930763 R 425104 CDS YP_001472526.1 157373926 5609918 complement(934132..935010) 1 NC_009831.1 KEGG: sbl:Sbal_0548 protein of unknown function DUF6, transmembrane; hypothetical protein 935010 5609918 Ssed_0787 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472526.1 934132 R 425104 CDS YP_001472527.1 157373927 5609919 complement(935010..935873) 1 NC_009831.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 935873 psd 5609919 psd Shewanella sediminis HAW-EB3 phosphatidylserine decarboxylase YP_001472527.1 935010 R 425104 CDS YP_001472528.1 157373928 5609920 complement(935907..936965) 1 NC_009831.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 936965 5609920 Ssed_0789 Shewanella sediminis HAW-EB3 ribosome-associated GTPase YP_001472528.1 935907 R 425104 CDS YP_001472529.1 157373929 5613921 937079..937624 1 NC_009831.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 937624 5613921 Ssed_0790 Shewanella sediminis HAW-EB3 oligoribonuclease YP_001472529.1 937079 D 425104 CDS YP_001472530.1 157373930 5611481 939047..939502 1 NC_009831.1 KEGG: saz:Sama_3031 conserved hypothetical protein; hypothetical protein 939502 5611481 Ssed_0791 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472530.1 939047 D 425104 CDS YP_001472531.1 157373931 5613923 940004..941482 1 NC_009831.1 KEGG: slo:Shew_0561 carbohydrate kinase, YjeF-related protein; carbohydrate kinase 941482 5613923 Ssed_0792 Shewanella sediminis HAW-EB3 carbohydrate kinase YP_001472531.1 940004 D 425104 CDS YP_001472532.1 157373932 5611377 941616..942074 1 NC_009831.1 KEGG: slo:Shew_0562 protein of unknown function UPF0079; hypothetical protein 942074 5611377 Ssed_0793 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472532.1 941616 D 425104 CDS YP_001472533.1 157373933 5611378 942077..943399 1 NC_009831.1 KEGG: slo:Shew_0563 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 943399 5611378 Ssed_0794 Shewanella sediminis HAW-EB3 N-acetylmuramoyl-L-alanine amidase YP_001472533.1 942077 D 425104 CDS YP_001472534.1 157373934 5611379 943453..945327 1 NC_009831.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 945327 mutL 5611379 mutL Shewanella sediminis HAW-EB3 DNA mismatch repair protein YP_001472534.1 943453 D 425104 CDS YP_001472535.1 157373935 5611380 945335..946246 1 NC_009831.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 946246 miaA 5611380 miaA Shewanella sediminis HAW-EB3 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001472535.1 945335 D 425104 CDS YP_001472536.1 157373936 5611057 946340..946621 1 NC_009831.1 KEGG: slo:Shew_0566 RNA chaperone Hfq; RNA chaperone Hfq 946621 5611057 Ssed_0797 Shewanella sediminis HAW-EB3 RNA chaperone Hfq YP_001472536.1 946340 D 425104 CDS YP_001472537.1 157373937 5611058 946641..947939 1 NC_009831.1 KEGG: slo:Shew_0567 GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein 947939 5611058 Ssed_0798 Shewanella sediminis HAW-EB3 HSR1-like GTP-binding protein YP_001472537.1 946641 D 425104 CDS YP_001472538.1 157373938 5611059 947983..949128 1 NC_009831.1 KEGG: slo:Shew_0568 HflK protein; HflK protein 949128 5611059 Ssed_0799 Shewanella sediminis HAW-EB3 HflK protein YP_001472538.1 947983 D 425104 CDS YP_001472539.1 157373939 5611527 949131..950009 1 NC_009831.1 KEGG: slo:Shew_0569 HflC protein; HflC protein 950009 5611527 Ssed_0800 Shewanella sediminis HAW-EB3 HflC protein YP_001472539.1 949131 D 425104 CDS YP_001472540.1 157373940 5611528 950338..950928 1 NC_009831.1 KEGG: slo:Shew_0570 ubiquinol-cytochrome c reductase, iron-sulfur subunit; ubiquinol--cytochrome-c reductase 950928 5611528 Ssed_0801 Shewanella sediminis HAW-EB3 ubiquinol--cytochrome-c reductase YP_001472540.1 950338 D 425104 CDS YP_001472541.1 157373941 5611529 950928..952142 1 NC_009831.1 KEGG: slo:Shew_0571 cytochrome b/b6, N-terminal domain; cytochrome b/b6 domain-containing protein 952142 5611529 Ssed_0802 Shewanella sediminis HAW-EB3 cytochrome b/b6 domain-containing protein YP_001472541.1 950928 D 425104 CDS YP_001472542.1 157373942 5611530 952142..952843 1 NC_009831.1 KEGG: slo:Shew_0572 cytochrome c1; cytochrome c1 952843 5611530 Ssed_0803 Shewanella sediminis HAW-EB3 cytochrome c1 YP_001472542.1 952142 D 425104 CDS YP_001472543.1 157373943 5610285 952952..953581 1 NC_009831.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 953581 sspA 5610285 sspA Shewanella sediminis HAW-EB3 stringent starvation protein A YP_001472543.1 952952 D 425104 CDS YP_001472544.1 157373944 5610286 953581..954039 1 NC_009831.1 KEGG: slo:Shew_0574 stringent starvation protein B; ClpXP protease specificity-enhancing factor 954039 5610286 Ssed_0805 Shewanella sediminis HAW-EB3 ClpXP protease specificity-enhancing factor YP_001472544.1 953581 D 425104 CDS YP_001472545.1 157373945 5610287 954224..954817 1 NC_009831.1 KEGG: sdn:Sden_3196 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase 954817 5610287 Ssed_0806 Shewanella sediminis HAW-EB3 glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase YP_001472545.1 954224 D 425104 CDS YP_001472546.1 157373946 5611396 955056..957539 1 NC_009831.1 KEGG: slo:Shew_0576 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 957539 5611396 Ssed_0807 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001472546.1 955056 D 425104 CDS YP_001472547.1 157373947 5611397 957732..958874 1 NC_009831.1 KEGG: shn:Shewana3_0608 signal transduction protein; signal transduction protein 958874 5611397 Ssed_0808 Shewanella sediminis HAW-EB3 signal transduction protein YP_001472547.1 957732 D 425104 CDS YP_001472548.1 157373948 5611398 959349..960566 1 NC_009831.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase 960566 argD 5611398 argD Shewanella sediminis HAW-EB3 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase YP_001472548.1 959349 D 425104 CDS YP_001472549.1 157373949 5611399 960702..961721 1 NC_009831.1 KEGG: slo:Shew_0579 arginine N-succinyltransferase; arginine N-succinyltransferase 961721 5611399 Ssed_0810 Shewanella sediminis HAW-EB3 arginine N-succinyltransferase YP_001472549.1 960702 D 425104 CDS YP_001472550.1 157373950 5611705 961730..963190 1 NC_009831.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 963190 astD 5611705 astD Shewanella sediminis HAW-EB3 succinylglutamic semialdehyde dehydrogenase YP_001472550.1 961730 D 425104 CDS YP_001472551.1 157373951 5611706 963418..964215 1 NC_009831.1 KEGG: slo:Shew_0581 hypothetical protein; hypothetical protein 964215 5611706 Ssed_0812 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472551.1 963418 D 425104 CDS YP_001472552.1 157373952 5611707 complement(964362..965351) 1 NC_009831.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 965351 5611707 Ssed_0813 Shewanella sediminis HAW-EB3 fructose-1,6-bisphosphatase YP_001472552.1 964362 R 425104 CDS YP_001472553.1 157373953 5611934 965609..967906 1 NC_009831.1 KEGG: slo:Shew_0774 peptidase S9B, dipeptidylpeptidase IV domain protein; peptidase S9B dipeptidylpeptidase IV subunit 967906 5611934 Ssed_0814 Shewanella sediminis HAW-EB3 peptidase S9B dipeptidylpeptidase IV subunit YP_001472553.1 965609 D 425104 CDS YP_001472554.1 157373954 5611935 complement(968335..969054) 1 NC_009831.1 KEGG: slo:Shew_0777 two component transcriptional regulator, winged helix family; two-component response regulator 969054 5611935 Ssed_0815 Shewanella sediminis HAW-EB3 two-component response regulator YP_001472554.1 968335 R 425104 CDS YP_001472555.1 157373955 5611936 969633..970070 1 NC_009831.1 KEGG: slo:Shew_0778 hypothetical protein; hypothetical protein 970070 5611936 Ssed_0816 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472555.1 969633 D 425104 CDS YP_001472556.1 157373956 5611937 970546..971898 1 NC_009831.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase 971898 5611937 Ssed_0817 Shewanella sediminis HAW-EB3 aspartate kinase YP_001472556.1 970546 D 425104 CDS YP_001472557.1 157373957 5612004 971985..973091 1 NC_009831.1 KEGG: slo:Shew_0780 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 973091 5612004 Ssed_0818 Shewanella sediminis HAW-EB3 succinylglutamate desuccinylase/aspartoacylase YP_001472557.1 971985 D 425104 CDS YP_001472558.1 157373958 5612005 complement(973185..977045) 1 NC_009831.1 KEGG: slo:Shew_0781 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 977045 5612005 Ssed_0819 Shewanella sediminis HAW-EB3 peptidase S8/S53 subtilisin kexin sedolisin YP_001472558.1 973185 R 425104 CDS YP_001472559.1 157373959 5612006 complement(977261..977722) 1 NC_009831.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 977722 5612006 Ssed_0820 Shewanella sediminis HAW-EB3 DNA-binding transcriptional regulator AsnC YP_001472559.1 977261 R 425104 CDS YP_001472560.1 157373960 5612639 complement(977891..978568) 1 NC_009831.1 KEGG: shm:Shewmr7_0827 pseudouridylate synthase; pseudouridylate synthase 978568 5612639 Ssed_0821 Shewanella sediminis HAW-EB3 pseudouridylate synthase YP_001472560.1 977891 R 425104 CDS YP_001472561.1 157373961 5612640 complement(978729..979019) 1 NC_009831.1 KEGG: slo:Shew_0784 hypothetical protein; hypothetical protein 979019 5612640 Ssed_0822 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472561.1 978729 R 425104 CDS YP_001472562.1 157373962 5612641 complement(979093..979644) 1 NC_009831.1 KEGG: shm:Shewmr7_3213 methyltransferase type 12; type 12 methyltransferase 979644 5612641 Ssed_0823 Shewanella sediminis HAW-EB3 type 12 methyltransferase YP_001472562.1 979093 R 425104 CDS YP_001472563.1 157373963 5612642 complement(979619..980029) 1 NC_009831.1 KEGG: slo:Shew_0786 hypothetical protein; hypothetical protein 980029 5612642 Ssed_0824 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472563.1 979619 R 425104 CDS YP_001472564.1 157373964 5612378 980258..981247 1 NC_009831.1 KEGG: slo:Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 981247 5612378 Ssed_0825 Shewanella sediminis HAW-EB3 D-isomer specific 2-hydroxyacid dehydrogenase YP_001472564.1 980258 D 425104 CDS YP_001472565.1 157373965 5612379 981335..982072 1 NC_009831.1 KEGG: sfr:Sfri_0519 dienelactone hydrolase; dienelactone hydrolase 982072 5612379 Ssed_0826 Shewanella sediminis HAW-EB3 dienelactone hydrolase YP_001472565.1 981335 D 425104 CDS YP_001472566.1 157373966 5612380 complement(982222..982758) 1 NC_009831.1 KEGG: she:Shewmr4_0805 hypothetical protein; hypothetical protein 982758 5612380 Ssed_0827 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472566.1 982222 R 425104 CDS YP_001472567.1 157373967 5612454 983074..983817 1 NC_009831.1 KEGG: slo:Shew_0791 spermine synthase; spermine synthase 983817 5612454 Ssed_0828 Shewanella sediminis HAW-EB3 spermine synthase YP_001472567.1 983074 D 425104 CDS YP_001472568.1 157373968 5612455 984038..984607 1 NC_009831.1 KEGG: slo:Shew_0792 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 984607 5612455 Ssed_0829 Shewanella sediminis HAW-EB3 alkyl hydroperoxide reductase YP_001472568.1 984038 D 425104 CDS YP_001472569.1 157373969 5612456 984810..986378 1 NC_009831.1 KEGG: shn:Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 986378 5612456 Ssed_0830 Shewanella sediminis HAW-EB3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001472569.1 984810 D 425104 CDS YP_001472570.1 157373970 5612457 986648..987703 1 NC_009831.1 KEGG: slo:Shew_0794 diguanylate cyclase; diguanylate cyclase 987703 5612457 Ssed_0831 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001472570.1 986648 D 425104 CDS YP_001472571.1 157373971 5612965 complement(987827..988024) 1 NC_009831.1 KEGG: slo:Shew_0796 hypothetical protein; hypothetical protein 988024 5612965 Ssed_0832 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472571.1 987827 R 425104 CDS YP_001472572.1 157373972 5612966 complement(988181..989605) 1 NC_009831.1 KEGG: slo:Shew_0797 hypothetical protein; hypothetical protein 989605 5612966 Ssed_0833 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472572.1 988181 R 425104 CDS YP_001472573.1 157373973 5612967 complement(989927..990382) 1 NC_009831.1 KEGG: slo:Shew_0798 hypothetical protein; hypothetical protein 990382 5612967 Ssed_0834 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472573.1 989927 R 425104 CDS YP_001472574.1 157373974 5613056 990773..991225 1 NC_009831.1 KEGG: sfr:Sfri_0578 transcriptional regulator, MarR family protein; MarR family transcriptional regulator 991225 5613056 Ssed_0835 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001472574.1 990773 D 425104 CDS YP_001472575.1 157373975 5613057 991322..992497 1 NC_009831.1 KEGG: sbl:Sbal_0867 FAD dependent oxidoreductase; FAD dependent oxidoreductase 992497 5613057 Ssed_0836 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001472575.1 991322 D 425104 CDS YP_001472576.1 157373976 5613058 992641..994305 1 NC_009831.1 KEGG: slo:Shew_0808 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 994305 5613058 Ssed_0837 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001472576.1 992641 D 425104 CDS YP_001472577.1 157373977 5613059 complement(994387..998709) 1 NC_009831.1 KEGG: slo:Shew_0809 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 998709 5613059 Ssed_0838 Shewanella sediminis HAW-EB3 formate dehydrogenase subunit alpha YP_001472577.1 994387 R 425104 CDS YP_001472578.1 157373978 5612990 complement(999065..1000048) 1 NC_009831.1 KEGG: slo:Shew_0810 ion transport 2 domain protein; ion transport 2 domain-containing protein 1000048 5612990 Ssed_0839 Shewanella sediminis HAW-EB3 ion transport 2 domain-containing protein YP_001472578.1 999065 R 425104 CDS YP_001472579.1 157373979 5612991 1000309..1001367 1 NC_009831.1 KEGG: sbl:Sbal_0872 peptide chain release factor 2; peptide chain release factor 2 1001367 5612991 Ssed_0840 Shewanella sediminis HAW-EB3 peptide chain release factor 2 YP_001472579.1 1000309 D 425104 CDS YP_001472580.1 157373980 5612992 1001438..1002940 1 NC_009831.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1002940 lysS 5612992 lysS Shewanella sediminis HAW-EB3 lysyl-tRNA synthetase YP_001472580.1 1001438 D 425104 CDS YP_001472581.1 157373981 5613105 1003204..1005657 1 NC_009831.1 KEGG: sbl:Sbal_1251 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1005657 5613105 Ssed_0842 Shewanella sediminis HAW-EB3 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001472581.1 1003204 D 425104 CDS YP_001472582.1 157373982 5613106 complement(1005697..1006353) 1 NC_009831.1 KEGG: cps:CPS_1154 RNA pseudouridine synthase family protein; RNA pseudouridine synthase family protein 1006353 5613106 Ssed_0843 Shewanella sediminis HAW-EB3 RNA pseudouridine synthase family protein YP_001472582.1 1005697 R 425104 CDS YP_001472583.1 157373983 5613107 1006590..1007378 1 NC_009831.1 KEGG: slo:Shew_0815 glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 1007378 5613107 Ssed_0844 Shewanella sediminis HAW-EB3 glucosamine-6-phosphate isomerase YP_001472583.1 1006590 D 425104 CDS YP_001472584.1 157373984 5613108 complement(1007379..1009115) 1 NC_009831.1 KEGG: tbd:Tbd_2693 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1009115 5613108 Ssed_0845 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001472584.1 1007379 R 425104 CDS YP_001472585.1 157373985 5613200 1009500..1009817 1 NC_009831.1 KEGG: slo:Shew_0817 cupin 2, conserved barrel domain protein; cupin 1009817 5613200 Ssed_0846 Shewanella sediminis HAW-EB3 cupin YP_001472585.1 1009500 D 425104 CDS YP_001472586.1 157373986 5613201 1009951..1011867 1 NC_009831.1 KEGG: shn:Shewana3_0800 peptidase U32; peptidase U32 1011867 5613201 Ssed_0847 Shewanella sediminis HAW-EB3 peptidase U32 YP_001472586.1 1009951 D 425104 CDS YP_001472587.1 157373987 5613202 1012124..1012498 1 NC_009831.1 KEGG: slo:Shew_0819 protein of unknown function DUF1696; hypothetical protein 1012498 5613202 Ssed_0848 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472587.1 1012124 D 425104 CDS YP_001472588.1 157373988 5613284 complement(1012611..1013843) 1 NC_009831.1 KEGG: slo:Shew_0820 hypothetical protein; hypothetical protein 1013843 5613284 Ssed_0849 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472588.1 1012611 R 425104 CDS YP_001472589.1 157373989 5613285 1014128..1014511 1 NC_009831.1 hypothetical protein 1014511 5613285 Ssed_0850 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472589.1 1014128 D 425104 CDS YP_001472590.1 157373990 5613286 1014679..1016313 1 NC_009831.1 KEGG: mxa:MXAN_5292 hypothetical protein; hypothetical protein 1016313 5613286 Ssed_0851 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472590.1 1014679 D 425104 CDS YP_001472591.1 157373991 5613287 1016452..1016742 1 NC_009831.1 KEGG: vfi:VF1323 lipoprotein; lipoprotein 1016742 5613287 Ssed_0852 Shewanella sediminis HAW-EB3 lipoprotein YP_001472591.1 1016452 D 425104 CDS YP_001472592.1 157373992 5613493 complement(1016763..1017200) 1 NC_009831.1 KEGG: slo:Shew_0734 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 1017200 5613493 Ssed_0853 Shewanella sediminis HAW-EB3 Fe-S metabolism associated SufE YP_001472592.1 1016763 R 425104 CDS YP_001472593.1 157373993 5613494 complement(1017372..1018583) 1 NC_009831.1 KEGG: son:SO3789 aminotransferase, class V; class V aminotransferase 1018583 5613494 Ssed_0854 Shewanella sediminis HAW-EB3 class V aminotransferase YP_001472593.1 1017372 R 425104 CDS YP_001472594.1 157373994 5613495 complement(1018780..1019823) 1 NC_009831.1 KEGG: slo:Shew_0736 aldo/keto reductase; aldo/keto reductase 1019823 5613495 Ssed_0855 Shewanella sediminis HAW-EB3 aldo/keto reductase YP_001472594.1 1018780 R 425104 CDS YP_001472595.1 157373995 5613418 complement(1020048..1021106) 1 NC_009831.1 KEGG: sbl:Sbal_0762 transcriptional regulator, MarR family; MarR family transcriptional regulator 1021106 5613418 Ssed_0856 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001472595.1 1020048 R 425104 CDS YP_001472596.1 157373996 5613419 complement(1021299..1021868) 1 NC_009831.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 1021868 5613419 Ssed_0857 Shewanella sediminis HAW-EB3 NTPase YP_001472596.1 1021299 R 425104 CDS YP_001472597.1 157373997 5613420 1022469..1023740 1 NC_009831.1 KEGG: slo:Shew_0739 aromatic amino acid permease; aromatic amino acid permease 1023740 5613420 Ssed_0858 Shewanella sediminis HAW-EB3 aromatic amino acid permease YP_001472597.1 1022469 D 425104 CDS YP_001472598.1 157373998 5613421 1023825..1025192 1 NC_009831.1 KEGG: slo:Shew_0740 L-serine dehydratase 1; L-serine ammonia-lyase 1025192 5613421 Ssed_0859 Shewanella sediminis HAW-EB3 L-serine ammonia-lyase YP_001472598.1 1023825 D 425104 CDS YP_001472599.1 157373999 5613880 complement(1025255..1025698) 1 NC_009831.1 KEGG: she:Shewmr4_0762 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1025698 5613880 Ssed_0860 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001472599.1 1025255 R 425104 CDS YP_001472600.1 157374000 5613881 1026119..1026481 1 NC_009831.1 KEGG: slo:Shew_0742 hypothetical protein; hypothetical protein 1026481 5613881 Ssed_0861 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472600.1 1026119 D 425104 CDS YP_001472601.1 157374001 5613882 1026798..1028147 1 NC_009831.1 KEGG: slo:Shew_0743 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1028147 5613882 Ssed_0862 Shewanella sediminis HAW-EB3 sodium:dicarboxylate symporter YP_001472601.1 1026798 D 425104 CDS YP_001472602.1 157374002 5613628 complement(1028262..1028675) 1 NC_009831.1 KEGG: slo:Shew_0744 protein of unknown function DUF306, MetA and HslJ; hypothetical protein 1028675 5613628 Ssed_0863 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472602.1 1028262 R 425104 CDS YP_001472603.1 157374003 5613629 1028765..1028980 1 NC_009831.1 KEGG: she:Shewmr4_0766 hypothetical protein; hypothetical protein 1028980 5613629 Ssed_0864 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472603.1 1028765 D 425104 CDS YP_001472604.1 157374004 5613630 complement(1028998..1029942) 1 NC_009831.1 KEGG: slo:Shew_0746 diguanylate cyclase; diguanylate cyclase 1029942 5613630 Ssed_0865 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001472604.1 1028998 R 425104 CDS YP_001472605.1 157374005 5613631 complement(1030174..1031184) 1 NC_009831.1 KEGG: slo:Shew_0747 GGDEF domain protein; diguanylate cyclase 1031184 5613631 Ssed_0866 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001472605.1 1030174 R 425104 CDS YP_001472606.1 157374006 5613943 1031359..1031916 1 NC_009831.1 KEGG: sbl:Sbal_0772 acetyltransferase, GNAT family; acetyltransferase 1031916 5613943 Ssed_0867 Shewanella sediminis HAW-EB3 acetyltransferase YP_001472606.1 1031359 D 425104 CDS YP_001472607.1 157374007 5613944 1031930..1032319 1 NC_009831.1 KEGG: sfr:Sfri_0644 hypothetical protein; hypothetical protein 1032319 5613944 Ssed_0868 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472607.1 1031930 D 425104 CDS YP_001472608.1 157374008 5613945 complement(1032397..1033362) 1 NC_009831.1 KEGG: bam:Bamb_1916 transcriptional regulator, LuxR family; response regulator 1033362 5613945 Ssed_0869 Shewanella sediminis HAW-EB3 response regulator YP_001472608.1 1032397 R 425104 CDS YP_001472609.1 157374009 5611444 1033432..1035081 1 NC_009831.1 KEGG: bbt:BBta_4675 fumarate reductase flavoprotein; fumarate reductase flavoprotein subunit 1035081 5611444 Ssed_0870 Shewanella sediminis HAW-EB3 fumarate reductase flavoprotein subunit YP_001472609.1 1033432 D 425104 CDS YP_001472610.1 157374010 5611445 1035108..1036838 1 NC_009831.1 KEGG: rfr:Rfer_3509 thiamine pyrophosphate enzyme-like TPP binding protein; thiamine pyrophosphate enzyme-like TPP binding protein 1036838 5611445 Ssed_0871 Shewanella sediminis HAW-EB3 thiamine pyrophosphate enzyme-like TPP binding protein YP_001472610.1 1035108 D 425104 CDS YP_001472611.1 157374011 5611446 complement(1036941..1037969) 1 NC_009831.1 KEGG: slo:Shew_3159 uncharacterized FlgJ-related protein-like; FlgJ-like protein 1037969 5611446 Ssed_0872 Shewanella sediminis HAW-EB3 FlgJ-like protein YP_001472611.1 1036941 R 425104 CDS YP_001472612.1 157374012 5611447 complement(1038223..1039374) 1 NC_009831.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1039374 5611447 Ssed_0873 Shewanella sediminis HAW-EB3 S-adenosylmethionine synthetase YP_001472612.1 1038223 R 425104 CDS YP_001472613.1 157374013 5611870 1039848..1041839 1 NC_009831.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1041839 5611870 Ssed_0874 Shewanella sediminis HAW-EB3 transketolase YP_001472613.1 1039848 D 425104 CDS YP_001472614.1 157374014 5611871 1042100..1043122 1 NC_009831.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 1043122 5611871 Ssed_0875 Shewanella sediminis HAW-EB3 erythrose 4-phosphate dehydrogenase YP_001472614.1 1042100 D 425104 CDS YP_001472615.1 157374015 5611872 1043400..1044575 1 NC_009831.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1044575 pgk 5611872 pgk Shewanella sediminis HAW-EB3 phosphoglycerate kinase YP_001472615.1 1043400 D 425104 CDS YP_001472616.1 157374016 5613936 1044805..1045869 1 NC_009831.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 1045869 5613936 Ssed_0877 Shewanella sediminis HAW-EB3 fructose-1,6-bisphosphate aldolase YP_001472616.1 1044805 D 425104 CDS YP_001472617.1 157374017 5613937 1046084..1046824 1 NC_009831.1 KEGG: slo:Shew_0756 protein of unknown function DUF481; hypothetical protein 1046824 5613937 Ssed_0878 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472617.1 1046084 D 425104 CDS YP_001472618.1 157374018 5613938 1047092..1047838 1 NC_009831.1 KEGG: slo:Shew_0757 transcriptional regulator, CadC; hypothetical protein 1047838 5613938 Ssed_0879 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472618.1 1047092 D 425104 CDS YP_001472619.1 157374019 5613939 1047831..1048364 1 NC_009831.1 KEGG: she:Shewmr4_0780 hypothetical protein; hypothetical protein 1048364 5613939 Ssed_0880 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472619.1 1047831 D 425104 CDS YP_001472620.1 157374020 5613588 complement(1049328..1049909) 1 NC_009831.1 KEGG: slo:Shew_0758 hypothetical protein; hypothetical protein 1049909 5613588 Ssed_0881 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472620.1 1049328 R 425104 CDS YP_001472621.1 157374021 5613589 complement(1049876..1050700) 1 NC_009831.1 KEGG: slo:Shew_0759 cytochrome c; cytochrome c 1050700 5613589 Ssed_0882 Shewanella sediminis HAW-EB3 cytochrome c YP_001472621.1 1049876 R 425104 CDS YP_001472622.1 157374022 5613590 1051175..1051909 1 NC_009831.1 KEGG: slo:Shew_0760 response regulator receiver protein; response regulator receiver protein 1051909 5613590 Ssed_0883 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001472622.1 1051175 D 425104 CDS YP_001472623.1 157374023 5612776 1051902..1052423 1 NC_009831.1 KEGG: slo:Shew_0761 hypothetical protein; hypothetical protein 1052423 5612776 Ssed_0884 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472623.1 1051902 D 425104 CDS YP_001472624.1 157374024 5612777 1052605..1053990 1 NC_009831.1 KEGG: slo:Shew_0762 hypothetical protein; hypothetical protein 1053990 5612777 Ssed_0885 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472624.1 1052605 D 425104 CDS YP_001472625.1 157374025 5612778 complement(1054035..1056251) 1 NC_009831.1 KEGG: slo:Shew_0763 PAS/PAC sensor protein; PAS/PAC sensor protein 1056251 5612778 Ssed_0886 Shewanella sediminis HAW-EB3 PAS/PAC sensor protein YP_001472625.1 1054035 R 425104 CDS YP_001472626.1 157374026 5612779 complement(1056404..1057078) 1 NC_009831.1 KEGG: slo:Shew_0764 radical SAM domain protein; radical SAM domain-containing protein 1057078 5612779 Ssed_0887 Shewanella sediminis HAW-EB3 radical SAM domain-containing protein YP_001472626.1 1056404 R 425104 CDS YP_001472627.1 157374027 5613618 complement(1057205..1060372) 1 NC_009831.1 KEGG: slo:Shew_0765 acriflavin resistance protein; acriflavin resistance protein 1060372 5613618 Ssed_0888 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001472627.1 1057205 R 425104 CDS YP_001472628.1 157374028 5613619 complement(1060372..1061589) 1 NC_009831.1 KEGG: slo:Shew_0766 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1061589 5613619 Ssed_0889 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001472628.1 1060372 R 425104 CDS YP_001472629.1 157374029 5613620 complement(1061964..1063190) 1 NC_009831.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 1063190 5613620 Ssed_0890 Shewanella sediminis HAW-EB3 ATP-dependent RNA helicase SrmB YP_001472629.1 1061964 R 425104 CDS YP_001472630.1 157374030 5609763 complement(1063310..1064044) 1 NC_009831.1 KEGG: sbl:Sbal_0841 methyltransferase small; methyltransferase small 1064044 5609763 Ssed_0891 Shewanella sediminis HAW-EB3 methyltransferase small YP_001472630.1 1063310 R 425104 CDS YP_001472631.1 157374031 5609764 1064519..1065850 1 NC_009831.1 KEGG: slo:Shew_0769 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 1065850 5609764 Ssed_0892 Shewanella sediminis HAW-EB3 branched-chain amino acid transport system II carrier protein YP_001472631.1 1064519 D 425104 CDS YP_001472632.1 157374032 5609765 1066274..1067188 1 NC_009831.1 KEGG: spc:Sputcn32_0890 tyrosine recombinase XerD; tyrosine recombinase XerD 1067188 5609765 Ssed_0893 Shewanella sediminis HAW-EB3 tyrosine recombinase XerD YP_001472632.1 1066274 D 425104 CDS YP_001472633.1 157374033 5609766 1067490..1068227 1 NC_009831.1 KEGG: slo:Shew_0771 thiol:disulfide interchange protein DsbC; thiol:disulfide interchange protein DsbC 1068227 5609766 Ssed_0894 Shewanella sediminis HAW-EB3 thiol:disulfide interchange protein DsbC YP_001472633.1 1067490 D 425104 CDS YP_001472634.1 157374034 5614074 1068380..1070104 1 NC_009831.1 KEGG: sbl:Sbal_0845 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 1070104 5614074 Ssed_0895 Shewanella sediminis HAW-EB3 single-stranded-DNA-specific exonuclease RecJ YP_001472634.1 1068380 D 425104 CDS YP_001472635.1 157374035 5614075 1071155..1072030 1 NC_009831.1 KEGG: shw:Sputw3181_0790 transcriptional regulator, LysR family; LysR family transcriptional regulator 1072030 5614075 Ssed_0896 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472635.1 1071155 D 425104 CDS YP_001472636.1 157374036 5614076 1072670..1073674 1 NC_009831.1 KEGG: yps:YPTB1775 hypothetical protein; hypothetical protein 1073674 5614076 Ssed_0897 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472636.1 1072670 D 425104 CDS YP_001472637.1 157374037 5613957 complement(1074254..1074910) 1 NC_009831.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1074910 5613957 Ssed_0898 Shewanella sediminis HAW-EB3 ribose-5-phosphate isomerase A YP_001472637.1 1074254 R 425104 CDS YP_001472638.1 157374038 5613958 complement(1075093..1075977) 1 NC_009831.1 KEGG: hypothetical protein; hypothetical protein 1075977 5613958 Ssed_0899 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472638.1 1075093 R 425104 CDS YP_001472639.1 157374039 5613959 1076201..1077133 1 NC_009831.1 KEGG: slo:Shew_0826 protein of unknown function DUF808; hypothetical protein 1077133 5613959 Ssed_0900 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472639.1 1076201 D 425104 CDS YP_001472640.1 157374040 5613960 complement(1077198..1078106) 1 NC_009831.1 KEGG: shn:Shewana3_0884 transcriptional regulator, LysR family; LysR family transcriptional regulator 1078106 5613960 Ssed_0901 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472640.1 1077198 R 425104 CDS YP_001472641.1 157374041 5613060 1078213..1078647 1 NC_009831.1 KEGG: shm:Shewmr7_0922 LrgA family protein; LrgA family protein 1078647 5613060 Ssed_0902 Shewanella sediminis HAW-EB3 LrgA family protein YP_001472641.1 1078213 D 425104 CDS YP_001472642.1 157374042 5613061 1078648..1079337 1 NC_009831.1 KEGG: she:Shewmr4_3049 LrgB family protein; LrgB family protein 1079337 5613061 Ssed_0903 Shewanella sediminis HAW-EB3 LrgB family protein YP_001472642.1 1078648 D 425104 CDS YP_001472643.1 157374043 5613062 1079782..1080852 1 NC_009831.1 KEGG: cps:CPS_1263 hypothetical protein; hypothetical protein 1080852 5613062 Ssed_0904 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472643.1 1079782 D 425104 CDS YP_001472644.1 157374044 5614208 complement(1081170..1081790) 1 NC_009831.1 KEGG: cps:CPS_1260 nitrate/nitrite DNA-binding response regulator; nitrate/nitrite DNA-binding response regulator 1081790 5614208 Ssed_0905 Shewanella sediminis HAW-EB3 nitrate/nitrite DNA-binding response regulator YP_001472644.1 1081170 R 425104 CDS YP_001472645.1 157374045 5614209 complement(1081787..1083196) 1 NC_009831.1 KEGG: cps:CPS_1261 sensor histidine kinase; sensor histidine kinase 1083196 5614209 Ssed_0906 Shewanella sediminis HAW-EB3 sensor histidine kinase YP_001472645.1 1081787 R 425104 CDS YP_001472646.1 157374046 5614210 1083952..1085595 1 NC_009831.1 KEGG: slo:Shew_3135 L-lactate permease; L-lactate permease 1085595 5614210 Ssed_0907 Shewanella sediminis HAW-EB3 L-lactate permease YP_001472646.1 1083952 D 425104 CDS YP_001472647.1 157374047 5614211 1085664..1088492 1 NC_009831.1 KEGG: shw:Sputw3181_2835 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 1088492 5614211 Ssed_0908 Shewanella sediminis HAW-EB3 FAD linked oxidase domain-containing protein YP_001472647.1 1085664 D 425104 CDS YP_001472648.1 157374048 5611337 complement(1088572..1088991) 1 NC_009831.1 KEGG: sbl:Sbal_0650 CBS domain containing protein; hypothetical protein 1088991 5611337 Ssed_0909 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472648.1 1088572 R 425104 CDS YP_001472649.1 157374049 5611338 1089193..1090962 1 NC_009831.1 KEGG: slo:Shew_0832 alkaline phosphatase; alkaline phosphatase 1090962 5611338 Ssed_0910 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001472649.1 1089193 D 425104 CDS YP_001472650.1 157374050 5611339 1091301..1091861 1 NC_009831.1 KEGG: slo:Shew_0833 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase 1091861 5611339 Ssed_0911 Shewanella sediminis HAW-EB3 hypoxanthine-guanine phosphoribosyltransferase YP_001472650.1 1091301 D 425104 CDS YP_001472651.1 157374051 5613997 complement(1091975..1092187) 1 NC_009831.1 KEGG: slo:Shew_0834 hypothetical protein; hypothetical protein 1092187 5613997 Ssed_0912 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472651.1 1091975 R 425104 CDS YP_001472652.1 157374052 5613998 complement(1092423..1095062) 1 NC_009831.1 KEGG: she:Shewmr4_3040 aminopeptidase N; aminopeptidase N 1095062 5613998 Ssed_0913 Shewanella sediminis HAW-EB3 aminopeptidase N YP_001472652.1 1092423 R 425104 CDS YP_001472653.1 157374053 5613999 complement(1095254..1095859) 1 NC_009831.1 KEGG: saz:Sama_0637 conserved hypothetical protein; hypothetical protein 1095859 5613999 Ssed_0914 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472653.1 1095254 R 425104 CDS YP_001472654.1 157374054 5614000 complement(1095870..1097237) 1 NC_009831.1 KEGG: spc:Sputcn32_3014 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1097237 5614000 Ssed_0915 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472654.1 1095870 R 425104 CDS YP_001472655.1 157374055 5614240 complement(1097514..1097726) 1 NC_009831.1 KEGG: slo:Shew_0838 SlyX family protein; SlyX family protein 1097726 5614240 Ssed_0916 Shewanella sediminis HAW-EB3 SlyX family protein YP_001472655.1 1097514 R 425104 CDS YP_001472656.1 157374056 5614241 complement(1097735..1098694) 1 NC_009831.1 KEGG: spc:Sputcn32_3011 WD-40 repeat protein; WD-40 repeat-containing protein 1098694 5614241 Ssed_0917 Shewanella sediminis HAW-EB3 WD-40 repeat-containing protein YP_001472656.1 1097735 R 425104 CDS YP_001472657.1 157374057 5614242 1098917..1099696 1 NC_009831.1 KEGG: slo:Shew_0840 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 1099696 5614242 Ssed_0918 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001472657.1 1098917 D 425104 CDS YP_001472658.1 157374058 5613257 1099834..1101000 1 NC_009831.1 KEGG: vpa:VP0236 nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 1101000 5613257 Ssed_0919 Shewanella sediminis HAW-EB3 nucleotide sugar dehydrogenase YP_001472658.1 1099834 D 425104 CDS YP_001472659.1 157374059 5613258 complement(1101393..1101830) 1 NC_009831.1 KEGG: ent:Ent638_2073 hypothetical protein; hypothetical protein 1101830 5613258 Ssed_0920 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472659.1 1101393 R 425104 CDS YP_001472660.1 157374060 5613259 complement(1101818..1102180) 1 NC_009831.1 KEGG: pfl:PFL_3048 hypothetical protein; hypothetical protein 1102180 5613259 Ssed_0921 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472660.1 1101818 R 425104 CDS YP_001472661.1 157374061 5613260 complement(1102180..1103820) 1 NC_009831.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 1103820 arnT 5613260 arnT Shewanella sediminis HAW-EB3 4-amino-4-deoxy-L-arabinose transferase YP_001472661.1 1102180 R 425104 CDS YP_001472662.1 157374062 5612493 complement(1103832..1104749) 1 NC_009831.1 KEGG: pfo:Pfl_2844 polysaccharide deacetylase; polysaccharide deacetylase 1104749 5612493 Ssed_0923 Shewanella sediminis HAW-EB3 polysaccharide deacetylase YP_001472662.1 1103832 R 425104 CDS YP_001472663.1 157374063 5612494 complement(1104746..1106728) 1 NC_009831.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 1106728 5612494 Ssed_0924 Shewanella sediminis HAW-EB3 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_001472663.1 1104746 R 425104 CDS YP_001472664.1 157374064 5612495 complement(1106770..1107765) 1 NC_009831.1 KEGG: pfl:PFL_3044 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 1107765 5612495 Ssed_0925 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001472664.1 1106770 R 425104 CDS YP_001472665.1 157374065 5612118 complement(1107765..1108931) 1 NC_009831.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1108931 5612118 Ssed_0926 Shewanella sediminis HAW-EB3 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_001472665.1 1107765 R 425104 CDS YP_001472666.1 157374066 5612119 1109747..1110217 1 NC_009831.1 KEGG: mgm:Mmc1_0984 hypothetical protein; hypothetical protein 1110217 5612119 Ssed_0927 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472666.1 1109747 D 425104 CDS YP_001472667.1 157374067 5612120 1110346..1110720 1 NC_009831.1 KEGG: slo:Shew_0841 uncharacterized conserved protein UCP006287; hypothetical protein 1110720 5612120 Ssed_0928 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472667.1 1110346 D 425104 CDS YP_001472668.1 157374068 5612121 complement(1110782..1111411) 1 NC_009831.1 KEGG: slo:Shew_0842 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1111411 5612121 Ssed_0929 Shewanella sediminis HAW-EB3 two component LuxR family transcriptional regulator YP_001472668.1 1110782 R 425104 CDS YP_001472669.1 157374069 5611125 complement(1111500..1113203) 1 NC_009831.1 KEGG: slo:Shew_0843 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; nitrate/nitrite sensor protein NarQ 1113203 5611125 Ssed_0930 Shewanella sediminis HAW-EB3 nitrate/nitrite sensor protein NarQ YP_001472669.1 1111500 R 425104 CDS YP_001472670.1 157374070 5611126 1113449..1114849 1 NC_009831.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 1114849 nrfA 5611126 nrfA Shewanella sediminis HAW-EB3 cytochrome c552 YP_001472670.1 1113449 D 425104 CDS YP_001472671.1 157374071 5611127 complement(1115033..1115575) 1 NC_009831.1 KEGG: shw:Sputw3181_0699 isochorismatase hydrolase; isochorismatase hydrolase 1115575 5611127 Ssed_0932 Shewanella sediminis HAW-EB3 isochorismatase hydrolase YP_001472671.1 1115033 R 425104 CDS YP_001472672.1 157374072 5610517 1115849..1116187 1 NC_009831.1 KEGG: saz:Sama_0650 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1116187 5610517 Ssed_0933 Shewanella sediminis HAW-EB3 nitrogen regulatory protein P-II YP_001472672.1 1115849 D 425104 CDS YP_001472673.1 157374073 5610518 1116200..1117450 1 NC_009831.1 KEGG: slo:Shew_0847 Rh family protein/ammonium transporter; Rh family protein/ammonium transporter 1117450 5610518 Ssed_0934 Shewanella sediminis HAW-EB3 Rh family protein/ammonium transporter YP_001472673.1 1116200 D 425104 CDS YP_001472674.1 157374074 5610519 1117568..1117924 1 NC_009831.1 KEGG: shw:Sputw3181_0702 hypothetical protein; hypothetical protein 1117924 5610519 Ssed_0935 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472674.1 1117568 D 425104 CDS YP_001472675.1 157374075 5610520 1118048..1119214 1 NC_009831.1 KEGG: slo:Shew_0849 TPR repeat-containing protein; hypothetical protein 1119214 5610520 Ssed_0936 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472675.1 1118048 D 425104 CDS YP_001472676.1 157374076 5610498 1119912..1120970 1 NC_009831.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1120970 5610498 Ssed_0937 Shewanella sediminis HAW-EB3 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001472676.1 1119912 D 425104 CDS YP_001472677.1 157374077 5610499 complement(1121108..1121284) 1 NC_009831.1 KEGG: shw:Sputw3181_0704 hypothetical protein; hypothetical protein 1121284 5610499 Ssed_0938 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472677.1 1121108 R 425104 CDS YP_001472678.1 157374078 5610500 1121661..1123433 1 NC_009831.1 KEGG: slo:Shew_0853 ABC transporter-related protein; ABC transporter-like protein 1123433 5610500 Ssed_0939 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001472678.1 1121661 D 425104 CDS YP_001472679.1 157374079 5611333 1123593..1123856 1 NC_009831.1 KEGG: slo:Shew_0854 hypothetical protein; hypothetical protein 1123856 5611333 Ssed_0940 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472679.1 1123593 D 425104 CDS YP_001472680.1 157374080 5611334 complement(1124394..1124939) 1 NC_009831.1 KEGG: son:SO0749 hypothetical protein; hypothetical protein 1124939 5611334 Ssed_0941 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472680.1 1124394 R 425104 CDS YP_001472681.1 157374081 5611335 1125081..1125665 1 NC_009831.1 KEGG: slo:Shew_0857 hypothetical protein; hypothetical protein 1125665 5611335 Ssed_0942 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472681.1 1125081 D 425104 CDS YP_001472682.1 157374082 5611336 1125783..1126532 1 NC_009831.1 KEGG: shw:Sputw3181_0711 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 1126532 5611336 Ssed_0943 Shewanella sediminis HAW-EB3 oxidoreductase FAD/NAD(P)-binding subunit YP_001472682.1 1125783 D 425104 CDS YP_001472683.1 157374083 5611153 1126601..1127194 1 NC_009831.1 KEGG: slo:Shew_0859 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 1127194 5611153 Ssed_0944 Shewanella sediminis HAW-EB3 glutathione S-transferase domain-containing protein YP_001472683.1 1126601 D 425104 CDS YP_001472684.1 157374084 5611154 1127421..1128428 1 NC_009831.1 KEGG: slo:Shew_0861 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1128428 5611154 Ssed_0945 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001472684.1 1127421 D 425104 CDS YP_001472685.1 157374085 5611155 1128657..1130288 1 NC_009831.1 KEGG: sfr:Sfri_0637 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1130288 5611155 Ssed_0946 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001472685.1 1128657 D 425104 CDS YP_001472686.1 157374086 5610878 1130382..1131410 1 NC_009831.1 KEGG: shm:Shewmr7_0608 ABC transporter related; ABC transporter 1131410 5610878 Ssed_0947 Shewanella sediminis HAW-EB3 ABC transporter YP_001472686.1 1130382 D 425104 CDS YP_001472687.1 157374087 5610879 1131459..1133150 1 NC_009831.1 KEGG: shw:Sputw3181_0717 gamma-glutamyltransferase; gamma-glutamyltransferase 1133150 5610879 Ssed_0948 Shewanella sediminis HAW-EB3 gamma-glutamyltransferase YP_001472687.1 1131459 D 425104 CDS YP_001472688.1 157374088 5610880 1133279..1134217 1 NC_009831.1 KEGG: slo:Shew_0864 Dyp-type peroxidase family; Dyp-type peroxidase family protein 1134217 5610880 Ssed_0949 Shewanella sediminis HAW-EB3 Dyp-type peroxidase family protein YP_001472688.1 1133279 D 425104 CDS YP_001472689.1 157374089 5610881 complement(1134306..1134782) 1 NC_009831.1 KEGG: slo:Shew_0865 cupin 2, conserved barrel domain protein; cupin 1134782 5610881 Ssed_0950 Shewanella sediminis HAW-EB3 cupin YP_001472689.1 1134306 R 425104 CDS YP_001472690.1 157374090 5611264 complement(1135008..1135478) 1 NC_009831.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1135478 5611264 Ssed_0951 Shewanella sediminis HAW-EB3 arginine repressor YP_001472690.1 1135008 R 425104 CDS YP_001472691.1 157374091 5611265 1135847..1136782 1 NC_009831.1 oxidizes malate to oxaloacetate; malate dehydrogenase 1136782 5611265 Ssed_0952 Shewanella sediminis HAW-EB3 malate dehydrogenase YP_001472691.1 1135847 D 425104 CDS YP_001472692.1 157374092 5611266 complement(1136876..1137847) 1 NC_009831.1 KEGG: slo:Shew_0868 trans-hexaprenyltranstransferase; trans-hexaprenyltranstransferase 1137847 5611266 Ssed_0953 Shewanella sediminis HAW-EB3 trans-hexaprenyltranstransferase YP_001472692.1 1136876 R 425104 CDS YP_001472693.1 157374093 5611267 1138126..1138437 1 NC_009831.1 KEGG: shw:Sputw3181_3188 ribosomal protein L21; 50S ribosomal protein L21 1138437 rplU 5611267 rplU Shewanella sediminis HAW-EB3 50S ribosomal protein L21 YP_001472693.1 1138126 D 425104 CDS YP_001472694.1 157374094 5612546 1138453..1138707 1 NC_009831.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1138707 rpmA 5612546 rpmA Shewanella sediminis HAW-EB3 50S ribosomal protein L27 YP_001472694.1 1138453 D 425104 CDS YP_001472695.1 157374095 5612547 1138849..1140009 1 NC_009831.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1140009 obgE 5612547 obgE Shewanella sediminis HAW-EB3 GTPase ObgE YP_001472695.1 1138849 D 425104 CDS YP_001472696.1 157374096 5612548 1140080..1140841 1 NC_009831.1 KEGG: slo:Shew_0872 protein of unknown function DUF1212; hypothetical protein 1140841 5612548 Ssed_0957 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472696.1 1140080 D 425104 CDS YP_001472697.1 157374097 5612549 1140841..1141308 1 NC_009831.1 KEGG: saz:Sama_2825 conserved hypothetical protein; hypothetical protein 1141308 5612549 Ssed_0958 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472697.1 1140841 D 425104 CDS YP_001472698.1 157374098 5610589 1141371..1141853 1 NC_009831.1 KEGG: slo:Shew_0874 dihydrofolate reductase; dihydrofolate reductase 1141853 5610589 Ssed_0959 Shewanella sediminis HAW-EB3 dihydrofolate reductase YP_001472698.1 1141371 D 425104 CDS YP_001472699.1 157374099 5610590 1141954..1142340 1 NC_009831.1 KEGG: slo:Shew_0875 hypothetical protein; hypothetical protein 1142340 5610590 Ssed_0960 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472699.1 1141954 D 425104 CDS YP_001472700.1 157374100 5610591 complement(1142417..1144444) 1 NC_009831.1 KEGG: slo:Shew_0876 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1144444 5610591 Ssed_0961 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001472700.1 1142417 R 425104 CDS YP_001472701.1 157374101 5610592 complement(1144581..1145405) 1 NC_009831.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1145405 apaH 5610592 apaH Shewanella sediminis HAW-EB3 diadenosine tetraphosphatase YP_001472701.1 1144581 R 425104 CDS YP_001472702.1 157374102 5609913 complement(1145440..1145820) 1 NC_009831.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 1145820 apaG 5609913 apaG Shewanella sediminis HAW-EB3 ApaG protein YP_001472702.1 1145440 R 425104 CDS YP_001472703.1 157374103 5609914 complement(1145915..1146718) 1 NC_009831.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1146718 ksgA 5609914 ksgA Shewanella sediminis HAW-EB3 dimethyladenosine transferase YP_001472703.1 1145915 R 425104 CDS YP_001472704.1 157374104 5609915 complement(1146732..1147718) 1 NC_009831.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1147718 pdxA 5609915 pdxA Shewanella sediminis HAW-EB3 4-hydroxythreonine-4-phosphate dehydrogenase YP_001472704.1 1146732 R 425104 CDS YP_001472705.1 157374105 5609916 complement(1147724..1149028) 1 NC_009831.1 KEGG: slo:Shew_0881 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1149028 5609916 Ssed_0966 Shewanella sediminis HAW-EB3 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001472705.1 1147724 R 425104 CDS YP_001472706.1 157374106 5611519 complement(1149150..1151474) 1 NC_009831.1 KEGG: slo:Shew_0882 organic solvent tolerance protein; organic solvent tolerance protein 1151474 5611519 Ssed_0967 Shewanella sediminis HAW-EB3 organic solvent tolerance protein YP_001472706.1 1149150 R 425104 CDS YP_001472707.1 157374107 5611520 1151629..1152633 1 NC_009831.1 KEGG: shm:Shewmr7_3111 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1152633 5611520 Ssed_0968 Shewanella sediminis HAW-EB3 aminoglycoside phosphotransferase YP_001472707.1 1151629 D 425104 CDS YP_001472708.1 157374108 5611521 1152630..1153319 1 NC_009831.1 KEGG: slo:Shew_0884 nucleotidyl transferase; nucleotidyl transferase 1153319 5611521 Ssed_0969 Shewanella sediminis HAW-EB3 nucleotidyl transferase YP_001472708.1 1152630 D 425104 CDS YP_001472709.1 157374109 5611522 1153396..1154175 1 NC_009831.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 1154175 djlA 5611522 djlA Shewanella sediminis HAW-EB3 Dna-J like membrane chaperone protein YP_001472709.1 1153396 D 425104 CDS YP_001472710.1 157374110 5614232 1154315..1154944 1 NC_009831.1 KEGG: slo:Shew_0886 hypothetical protein; hypothetical protein 1154944 5614232 Ssed_0971 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472710.1 1154315 D 425104 CDS YP_001472711.1 157374111 5614233 1154987..1155958 1 NC_009831.1 KEGG: slo:Shew_0887 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 1155958 5614233 Ssed_0972 Shewanella sediminis HAW-EB3 D-isomer specific 2-hydroxyacid dehydrogenase YP_001472711.1 1154987 D 425104 CDS YP_001472712.1 157374112 5614234 complement(1156025..1157200) 1 NC_009831.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1157200 purT 5614234 purT Shewanella sediminis HAW-EB3 phosphoribosylglycinamide formyltransferase 2 YP_001472712.1 1156025 R 425104 CDS YP_001472713.1 157374113 5614235 1157515..1157922 1 NC_009831.1 KEGG: slo:Shew_0889 hypothetical protein; hypothetical protein 1157922 5614235 Ssed_0974 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472713.1 1157515 D 425104 CDS YP_001472714.1 157374114 5612058 1157924..1159060 1 NC_009831.1 KEGG: slo:Shew_0890 secretion protein HlyD family protein; secretion protein HlyD family protein 1159060 5612058 Ssed_0975 Shewanella sediminis HAW-EB3 secretion protein HlyD family protein YP_001472714.1 1157924 D 425104 CDS YP_001472715.1 157374115 5612059 complement(1159166..1159975) 1 NC_009831.1 KEGG: slo:Shew_3770 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 1159975 5612059 Ssed_0976 Shewanella sediminis HAW-EB3 Sel1 domain-containing protein YP_001472715.1 1159166 R 425104 CDS YP_001472716.1 157374116 5612060 1160332..1161801 1 NC_009831.1 KEGG: slo:Shew_0892 AAA ATPase, central domain protein; ATPase central domain-containing protein 1161801 5612060 Ssed_0977 Shewanella sediminis HAW-EB3 ATPase central domain-containing protein YP_001472716.1 1160332 D 425104 CDS YP_001472717.1 157374117 5612061 complement(1161907..1162497) 1 NC_009831.1 KEGG: shw:Sputw3181_3158 hypothetical protein; hypothetical protein 1162497 5612061 Ssed_0978 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472717.1 1161907 R 425104 CDS YP_001472718.1 157374118 5609597 1162552..1162917 1 NC_009831.1 KEGG: slo:Shew_0894 protein of unknown function DUF1289; Fe-S protein-like protein 1162917 5609597 Ssed_0979 Shewanella sediminis HAW-EB3 Fe-S protein-like protein YP_001472718.1 1162552 D 425104 CDS YP_001472719.1 157374119 5609598 complement(1163003..1164295) 1 NC_009831.1 KEGG: slo:Shew_0895 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1164295 5609598 Ssed_0980 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001472719.1 1163003 R 425104 CDS YP_001472720.1 157374120 5609599 complement(1164352..1165065) 1 NC_009831.1 KEGG: slo:Shew_0896 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1165065 5609599 Ssed_0981 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001472720.1 1164352 R 425104 CDS YP_001472721.1 157374121 5609600 complement(1165065..1165484) 1 NC_009831.1 KEGG: slo:Shew_0897 hypothetical protein; hypothetical protein 1165484 5609600 Ssed_0982 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472721.1 1165065 R 425104 CDS YP_001472722.1 157374122 5610260 complement(1165490..1166374) 1 NC_009831.1 KEGG: slo:Shew_0898 MltA-interacting MipA family protein; MltA-interacting MipA family protein 1166374 5610260 Ssed_0983 Shewanella sediminis HAW-EB3 MltA-interacting MipA family protein YP_001472722.1 1165490 R 425104 CDS YP_001472723.1 157374123 5610261 1166673..1167848 1 NC_009831.1 KEGG: slo:Shew_0900 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 1167848 5610261 Ssed_0984 Shewanella sediminis HAW-EB3 acyl-CoA dehydrogenase YP_001472723.1 1166673 D 425104 CDS YP_001472724.1 157374124 5610262 complement(1168034..1169242) 1 NC_009831.1 KEGG: slo:Shew_0905 response regulator receiver protein; response regulator receiver protein 1169242 5610262 Ssed_0985 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001472724.1 1168034 R 425104 CDS YP_001472725.1 157374125 5610263 complement(1169211..1169579) 1 NC_009831.1 KEGG: slo:Shew_0906 Hpt protein; Hpt protein 1169579 5610263 Ssed_0986 Shewanella sediminis HAW-EB3 Hpt protein YP_001472725.1 1169211 R 425104 CDS YP_001472726.1 157374126 5609887 complement(1169572..1172388) 1 NC_009831.1 KEGG: slo:Shew_0907 PAS/PAC sensor hybrid histidine kinase; histidine kinase 1172388 5609887 Ssed_0987 Shewanella sediminis HAW-EB3 histidine kinase YP_001472726.1 1169572 R 425104 CDS YP_001472727.1 157374127 5609888 complement(1172495..1173385) 1 NC_009831.1 KEGG: she:Shewmr4_1103 UspA domain protein; UspA domain-containing protein 1173385 5609888 Ssed_0988 Shewanella sediminis HAW-EB3 UspA domain-containing protein YP_001472727.1 1172495 R 425104 CDS YP_001472728.1 157374128 5609889 complement(1173633..1174103) 1 NC_009831.1 KEGG: shw:Sputw3181_3150 hypothetical protein; hypothetical protein 1174103 5609889 Ssed_0989 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472728.1 1173633 R 425104 CDS YP_001472729.1 157374129 5609890 complement(1174350..1174724) 1 NC_009831.1 hypothetical protein 1174724 5609890 Ssed_0990 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472729.1 1174350 R 425104 CDS YP_001472730.1 157374130 5609901 1175131..1175370 1 NC_009831.1 KEGG: slo:Shew_0912 hypothetical protein; hypothetical protein 1175370 5609901 Ssed_0991 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472730.1 1175131 D 425104 CDS YP_001472731.1 157374131 5609902 complement(1175561..1175980) 1 NC_009831.1 KEGG: slo:Shew_0913 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1175980 5609902 Ssed_0992 Shewanella sediminis HAW-EB3 glyoxalase/bleomycin resistance protein/dioxygenase YP_001472731.1 1175561 R 425104 CDS YP_001472732.1 157374132 5609903 complement(1176021..1176407) 1 NC_009831.1 KEGG: ilo:IL1591 glyoxalase/dioxygenase superfamily protein; glyoxalase/dioxygenase superfamily protein 1176407 5609903 Ssed_0993 Shewanella sediminis HAW-EB3 glyoxalase/dioxygenase superfamily protein YP_001472732.1 1176021 R 425104 CDS YP_001472733.1 157374133 5609904 complement(1176429..1177085) 1 NC_009831.1 KEGG: slo:Shew_0914 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1177085 5609904 Ssed_0994 Shewanella sediminis HAW-EB3 NADPH-dependent FMN reductase YP_001472733.1 1176429 R 425104 CDS YP_001472734.1 157374134 5610216 1177229..1177849 1 NC_009831.1 KEGG: cps:CPS_0091 hypothetical protein; hypothetical protein 1177849 5610216 Ssed_0995 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472734.1 1177229 D 425104 CDS YP_001472735.1 157374135 5610217 1177821..1178564 1 NC_009831.1 KEGG: shw:Sputw3181_3146 pseudouridine synthase; pseudouridine synthase 1178564 5610217 Ssed_0996 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001472735.1 1177821 D 425104 CDS YP_001472736.1 157374136 5610218 1178674..1179639 1 NC_009831.1 KEGG: slo:Shew_0917 transcriptional regulator, LysR family; LysR family transcriptional regulator 1179639 5610218 Ssed_0997 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472736.1 1178674 D 425104 CDS YP_001472737.1 157374137 5610219 1179811..1182111 1 NC_009831.1 KEGG: sfr:Sfri_0913 decaheme cytochrome c; decaheme cytochrome c 1182111 5610219 Ssed_0998 Shewanella sediminis HAW-EB3 decaheme cytochrome c YP_001472737.1 1179811 D 425104 CDS YP_001472738.1 157374138 5610053 1182926..1183537 1 NC_009831.1 KEGG: ppr:PBPRA2415 membrane protein; hypothetical protein 1183537 5610053 Ssed_0999 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472738.1 1182926 D 425104 CDS YP_001472739.1 157374139 5610054 complement(1183639..1185171) 1 NC_009831.1 KEGG: slo:Shew_0920 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1185171 5610054 Ssed_1000 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001472739.1 1183639 R 425104 CDS YP_001472740.1 157374140 5610055 1185661..1186221 1 NC_009831.1 KEGG: vpa:VP1794 hypothetical protein; hypothetical protein 1186221 5610055 Ssed_1001 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472740.1 1185661 D 425104 CDS YP_001472741.1 157374141 5610056 1186394..1189696 1 NC_009831.1 KEGG: sde:Sde_3112 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis protein-like protein 1189696 5610056 Ssed_1002 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein-like protein YP_001472741.1 1186394 D 425104 CDS YP_001472742.1 157374142 5610061 complement(1189876..1190451) 1 NC_009831.1 KEGG: ppr:PBPRA1250 hypothetical protein; hypothetical protein 1190451 5610061 Ssed_1003 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472742.1 1189876 R 425104 CDS YP_001472743.1 157374143 5610062 complement(1190429..1191241) 1 NC_009831.1 KEGG: pin:Ping_2620 hypothetical protein DUF52; hypothetical protein 1191241 5610062 Ssed_1004 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472743.1 1190429 R 425104 CDS YP_001472744.1 157374144 5610063 1191313..1192425 1 NC_009831.1 KEGG: slo:Shew_0932 radical SAM domain protein; radical SAM domain-containing protein 1192425 5610063 Ssed_1005 Shewanella sediminis HAW-EB3 radical SAM domain-containing protein YP_001472744.1 1191313 D 425104 CDS YP_001472745.1 157374145 5610064 1192645..1194366 1 NC_009831.1 KEGG: slo:Shew_0922 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1194366 5610064 Ssed_1006 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001472745.1 1192645 D 425104 CDS YP_001472746.1 157374146 5609984 1194734..1196455 1 NC_009831.1 KEGG: slo:Shew_0922 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1196455 5609984 Ssed_1007 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001472746.1 1194734 D 425104 CDS YP_001472747.1 157374147 5609985 complement(1196866..1199781) 1 NC_009831.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1199781 valS 5609985 valS Shewanella sediminis HAW-EB3 valyl-tRNA synthetase YP_001472747.1 1196866 R 425104 CDS YP_001472748.1 157374148 5609986 complement(1199797..1200267) 1 NC_009831.1 KEGG: shn:Shewana3_1132 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit, HolC 1200267 5609986 Ssed_1009 Shewanella sediminis HAW-EB3 DNA polymerase III chi subunit, HolC YP_001472748.1 1199797 R 425104 CDS YP_001472749.1 157374149 5609987 complement(1200612..1201754) 1 NC_009831.1 KEGG: hch:HCH_00071 ABC-type sugar transport system, periplasmic component; sugar ABC transporter periplasmic protein 1201754 5609987 Ssed_1010 Shewanella sediminis HAW-EB3 sugar ABC transporter periplasmic protein YP_001472749.1 1200612 R 425104 CDS YP_001472750.1 157374150 5609622 1203137..1204327 1 NC_009831.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1204327 5609622 Ssed_1011 Shewanella sediminis HAW-EB3 ribosome-associated GTPase YP_001472750.1 1203137 D 425104 CDS YP_001472751.1 157374151 5609623 1204825..1206705 1 NC_009831.1 KEGG: vfi:VF1652 hypothetical protein; hypothetical protein 1206705 5609623 Ssed_1012 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472751.1 1204825 D 425104 CDS YP_001472752.1 157374152 5609624 1206827..1207279 1 NC_009831.1 KEGG: ppr:PBPRB0254 hypothetical protein; hypothetical protein 1207279 5609624 Ssed_1013 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472752.1 1206827 D 425104 CDS YP_001472753.1 157374153 5609625 complement(1207528..1209036) 1 NC_009831.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1209036 5609625 Ssed_1014 Shewanella sediminis HAW-EB3 leucyl aminopeptidase YP_001472753.1 1207528 R 425104 CDS YP_001472754.1 157374154 5610368 1209257..1210369 1 NC_009831.1 KEGG: slo:Shew_0940 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 1210369 5610368 Ssed_1015 Shewanella sediminis HAW-EB3 YjgP/YjgQ family permease YP_001472754.1 1209257 D 425104 CDS YP_001472755.1 157374155 5610369 1210366..1211424 1 NC_009831.1 KEGG: slo:Shew_0941 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 1211424 5610369 Ssed_1016 Shewanella sediminis HAW-EB3 YjgP/YjgQ family permease YP_001472755.1 1210366 D 425104 CDS YP_001472756.1 157374156 5610370 complement(1211567..1212091) 1 NC_009831.1 KEGG: slo:Shew_0942 RDD domain containing protein; RDD domain-containing protein 1212091 5610370 Ssed_1017 Shewanella sediminis HAW-EB3 RDD domain-containing protein YP_001472756.1 1211567 R 425104 CDS YP_001472757.1 157374157 5610371 complement(1212179..1212436) 1 NC_009831.1 KEGG: pha:PSHAa2433 hypothetical protein; hypothetical protein 1212436 5610371 Ssed_1018 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472757.1 1212179 R 425104 CDS YP_001472758.1 157374158 5609946 complement(1212556..1213041) 1 NC_009831.1 KEGG: slo:Shew_0944 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1213041 5609946 Ssed_1019 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001472758.1 1212556 R 425104 CDS YP_001472759.1 157374159 5609947 complement(1213148..1214638) 1 NC_009831.1 KEGG: shn:Shewana3_2999 peptidase M32, carboxypeptidase Taq metallopeptidase; carboxypeptidase Taq 1214638 5609947 Ssed_1020 Shewanella sediminis HAW-EB3 carboxypeptidase Taq YP_001472759.1 1213148 R 425104 CDS YP_001472760.1 157374160 5609948 complement(1214819..1215445) 1 NC_009831.1 KEGG: slo:Shew_0948 hypothetical protein; hypothetical protein 1215445 5609948 Ssed_1021 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472760.1 1214819 R 425104 CDS YP_001472761.1 157374161 5609949 complement(1215527..1216834) 1 NC_009831.1 KEGG: slo:Shew_0950 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1216834 5609949 Ssed_1022 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001472761.1 1215527 R 425104 CDS YP_001472762.1 157374162 5609836 1217214..1218413 1 NC_009831.1 KEGG: slo:Shew_0951 response regulator receiver modulated diguanylate phosphodiesterase; response regulator receiver modulated diguanylate phosphodiesterase 1218413 5609836 Ssed_1023 Shewanella sediminis HAW-EB3 response regulator receiver modulated diguanylate phosphodiesterase YP_001472762.1 1217214 D 425104 CDS YP_001472763.1 157374163 5609837 complement(1218507..1220294) 1 NC_009831.1 KEGG: sbl:Sbal_3085 peptidase M24; peptidase M24 1220294 5609837 Ssed_1024 Shewanella sediminis HAW-EB3 peptidase M24 YP_001472763.1 1218507 R 425104 CDS YP_001472764.1 157374164 5609838 1220589..1221785 1 NC_009831.1 KEGG: slo:Shew_0953 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1221785 5609838 Ssed_1025 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001472764.1 1220589 D 425104 CDS YP_001472765.1 157374165 5609839 1221879..1222658 1 NC_009831.1 KEGG: sbl:Sbal_3084 ROK family protein; ROK family protein 1222658 5609839 Ssed_1026 Shewanella sediminis HAW-EB3 ROK family protein YP_001472765.1 1221879 D 425104 CDS YP_001472766.1 157374166 5610202 1223070..1224383 1 NC_009831.1 KEGG: slo:Shew_2784 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 1224383 5610202 Ssed_1027 Shewanella sediminis HAW-EB3 PA-phosphatase-like phosphoesterase YP_001472766.1 1223070 D 425104 CDS YP_001472767.1 157374167 5610203 1224666..1225883 1 NC_009831.1 KEGG: slo:Shew_0955 peptidase M24; peptidase M24 1225883 5610203 Ssed_1028 Shewanella sediminis HAW-EB3 peptidase M24 YP_001472767.1 1224666 D 425104 CDS YP_001472768.1 157374168 5610204 complement(1225968..1226438) 1 NC_009831.1 KEGG: slo:Shew_0956 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 1226438 5610204 Ssed_1029 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001472768.1 1225968 R 425104 CDS YP_001472769.1 157374169 5610205 complement(1226635..1226970) 1 NC_009831.1 KEGG: cps:CPS_0148 cold-shock DNA-binding domain family protein; cold shock DNA-binding domain-containing protein 1226970 5610205 Ssed_1030 Shewanella sediminis HAW-EB3 cold shock DNA-binding domain-containing protein YP_001472769.1 1226635 R 425104 CDS YP_001472770.1 157374170 5610315 complement(1227131..1228426) 1 NC_009831.1 KEGG: hch:HCH_06918 signal transduction histidine kinase; Signal transduction histidine kinase-like protein 1228426 5610315 Ssed_1031 Shewanella sediminis HAW-EB3 Signal transduction histidine kinase-like protein YP_001472770.1 1227131 R 425104 CDS YP_001472771.1 157374171 5610316 complement(1228423..1229121) 1 NC_009831.1 KEGG: hch:HCH_06917 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator 1229121 5610316 Ssed_1032 Shewanella sediminis HAW-EB3 response regulator YP_001472771.1 1228423 R 425104 CDS YP_001472772.1 157374172 5610317 complement(1229186..1229560) 1 NC_009831.1 KEGG: aha:AHA_1407 hypothetical protein; hypothetical protein 1229560 5610317 Ssed_1033 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472772.1 1229186 R 425104 CDS YP_001472773.1 157374173 5610318 complement(1229557..1232217) 1 NC_009831.1 KEGG: pat:Patl_0505 PPE-repeat protein; PPE repeat-containing protein 1232217 5610318 Ssed_1034 Shewanella sediminis HAW-EB3 PPE repeat-containing protein YP_001472773.1 1229557 R 425104 CDS YP_001472774.1 157374174 5613082 complement(1232376..1232858) 1 NC_009831.1 KEGG: sdn:Sden_2236 hypothetical protein; hypothetical protein 1232858 5613082 Ssed_1035 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472774.1 1232376 R 425104 CDS YP_001472775.1 157374175 5613083 1233026..1233283 1 NC_009831.1 KEGG: slo:Shew_3148 transcriptional regulator, MarR family; MarR family transcriptional regulator 1233283 5613083 Ssed_1036 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001472775.1 1233026 D 425104 CDS YP_001472776.1 157374176 5613084 complement(1233285..1233761) 1 NC_009831.1 KEGG: saz:Sama_2784 conserved hypothetical protein; hypothetical protein 1233761 5613084 Ssed_1037 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472776.1 1233285 R 425104 CDS YP_001472777.1 157374177 5613085 1233988..1234920 1 NC_009831.1 KEGG: slo:Shew_0960 protein of unknown function DUF368; hypothetical protein 1234920 5613085 Ssed_1038 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472777.1 1233988 D 425104 CDS YP_001472778.1 157374178 5612830 complement(1235181..1235525) 1 NC_009831.1 KEGG: slo:Shew_0961 hypothetical protein; hypothetical protein 1235525 5612830 Ssed_1039 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472778.1 1235181 R 425104 CDS YP_001472779.1 157374179 5612831 1235745..1235927 1 NC_009831.1 KEGG: slo:Shew_0962 hypothetical protein; hypothetical protein 1235927 5612831 Ssed_1040 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472779.1 1235745 D 425104 CDS YP_001472780.1 157374180 5612832 complement(1236002..1236721) 1 NC_009831.1 KEGG: slo:Shew_0963 hypothetical protein; hypothetical protein 1236721 5612832 Ssed_1041 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472780.1 1236002 R 425104 CDS YP_001472781.1 157374181 5612833 complement(1236859..1237242) 1 NC_009831.1 KEGG: slo:Shew_0964 protein of unknown function DUF861, cupin_3; hypothetical protein 1237242 5612833 Ssed_1042 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472781.1 1236859 R 425104 CDS YP_001472782.1 157374182 5610174 complement(1237318..1238808) 1 NC_009831.1 KEGG: slo:Shew_0965 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1238808 5610174 Ssed_1043 Shewanella sediminis HAW-EB3 methylmalonate-semialdehyde dehydrogenase YP_001472782.1 1237318 R 425104 CDS YP_001472783.1 157374183 5610175 complement(1238919..1240256) 1 NC_009831.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1240256 5610175 Ssed_1044 Shewanella sediminis HAW-EB3 beta alanine--pyruvate transaminase YP_001472783.1 1238919 R 425104 CDS YP_001472784.1 157374184 5610176 1240591..1242102 1 NC_009831.1 KEGG: slo:Shew_0967 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 1242102 5610176 Ssed_1045 Shewanella sediminis HAW-EB3 aldehyde dehydrogenase YP_001472784.1 1240591 D 425104 CDS YP_001472785.1 157374185 5610177 complement(1242162..1243388) 1 NC_009831.1 KEGG: she:Shewmr4_0147 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1243388 5610177 Ssed_1046 Shewanella sediminis HAW-EB3 sodium:dicarboxylate symporter YP_001472785.1 1242162 R 425104 CDS YP_001472786.1 157374186 5612031 complement(1243683..1244459) 1 NC_009831.1 KEGG: cps:CPS_4645 hypothetical protein; hypothetical protein 1244459 5612031 Ssed_1047 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472786.1 1243683 R 425104 CDS YP_001472787.1 157374187 5612032 complement(1244631..1245536) 1 NC_009831.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 1245536 5612032 Ssed_1048 Shewanella sediminis HAW-EB3 ribokinase YP_001472787.1 1244631 R 425104 CDS YP_001472788.1 157374188 5612033 complement(1245613..1246551) 1 NC_009831.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1 1246551 rihA 5612033 rihA Shewanella sediminis HAW-EB3 ribonucleoside hydrolase 1 YP_001472788.1 1245613 R 425104 CDS YP_001472789.1 157374189 5612034 1246820..1247377 1 NC_009831.1 KEGG: ppr:PBPRB0776 adenylate cyclase CyaB; adenylate cyclase 1247377 5612034 Ssed_1050 Shewanella sediminis HAW-EB3 adenylate cyclase YP_001472789.1 1246820 D 425104 CDS YP_001472790.1 157374190 5613559 1247932..1248639 1 NC_009831.1 hypothetical protein 1248639 5613559 Ssed_1051 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472790.1 1247932 D 425104 CDS YP_001472791.1 157374191 5613560 1248771..1249175 1 NC_009831.1 KEGG: sfr:Sfri_1576 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1249175 5613560 Ssed_1052 Shewanella sediminis HAW-EB3 glutathione-dependent formaldehyde-activating protein YP_001472791.1 1248771 D 425104 CDS YP_001472792.1 157374192 5613561 1249406..1249828 1 NC_009831.1 KEGG: ava:Ava_B0058 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1249828 5613561 Ssed_1053 Shewanella sediminis HAW-EB3 glutathione-dependent formaldehyde-activating protein YP_001472792.1 1249406 D 425104 CDS YP_001472793.1 157374193 5613562 1250507..1250902 1 NC_009831.1 KEGG: cps:CPS_2741 hypothetical protein; hypothetical protein 1250902 5613562 Ssed_1054 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472793.1 1250507 D 425104 CDS YP_001472794.1 157374194 5612942 1251028..1251264 1 NC_009831.1 KEGG: ilo:IL1812 hypothetical protein; hypothetical protein 1251264 5612942 Ssed_1055 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472794.1 1251028 D 425104 CDS YP_001472795.1 157374195 5612943 1251364..1251711 1 NC_009831.1 hypothetical protein 1251711 5612943 Ssed_1056 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472795.1 1251364 D 425104 CDS YP_001472796.1 157374196 5612944 complement(1252352..1253659) 1 NC_009831.1 KEGG: slo:Shew_0969 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1253659 5612944 Ssed_1057 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001472796.1 1252352 R 425104 CDS YP_001472797.1 157374197 5612945 1253857..1254411 1 NC_009831.1 KEGG: shn:Shewana3_3100 transcriptional regulator, XRE family; XRE family transcriptional regulator 1254411 5612945 Ssed_1058 Shewanella sediminis HAW-EB3 XRE family transcriptional regulator YP_001472797.1 1253857 D 425104 CDS YP_001472798.1 157374198 5610131 1255231..1255992 1 NC_009831.1 KEGG: slo:Shew_0971 peptidase C26; peptidase C26 1255992 5610131 Ssed_1059 Shewanella sediminis HAW-EB3 peptidase C26 YP_001472798.1 1255231 D 425104 CDS YP_001472799.1 157374199 5610132 1255995..1257344 1 NC_009831.1 KEGG: slo:Shew_0972 glutamate--ammonia ligase; glutamate--putrescine ligase 1257344 5610132 Ssed_1060 Shewanella sediminis HAW-EB3 glutamate--putrescine ligase YP_001472799.1 1255995 D 425104 CDS YP_001472800.1 157374200 5610133 1257662..1258762 1 NC_009831.1 KEGG: slo:Shew_0973 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1258762 5610133 Ssed_1061 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001472800.1 1257662 D 425104 CDS YP_001472801.1 157374201 5610134 1258838..1260001 1 NC_009831.1 KEGG: slo:Shew_0974 spermidine/putrescine ABC transporter ATPase subunit; spermidine/putrescine ABC transporter ATPase 1260001 5610134 Ssed_1062 Shewanella sediminis HAW-EB3 spermidine/putrescine ABC transporter ATPase YP_001472801.1 1258838 D 425104 CDS YP_001472802.1 157374202 5613175 1260013..1260918 1 NC_009831.1 KEGG: slo:Shew_0975 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1260918 5613175 Ssed_1063 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001472802.1 1260013 D 425104 CDS YP_001472803.1 157374203 5613176 1260915..1261742 1 NC_009831.1 KEGG: slo:Shew_0976 binding-protein-dependent transport systems inner membrane component; ornithine carbamoyltransferase 1261742 5613176 Ssed_1064 Shewanella sediminis HAW-EB3 ornithine carbamoyltransferase YP_001472803.1 1260915 D 425104 CDS YP_001472804.1 157374204 5613177 1261914..1263200 1 NC_009831.1 KEGG: slo:Shew_0977 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1263200 5613177 Ssed_1065 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001472804.1 1261914 D 425104 CDS YP_001472805.1 157374205 5613178 1263449..1265566 1 NC_009831.1 KEGG: shn:Shewana3_3088 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1265566 5613178 Ssed_1066 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001472805.1 1263449 D 425104 CDS YP_001472806.1 157374206 5613040 1265710..1267503 1 NC_009831.1 KEGG: bra:BRADO5800 glutamate synthase (NADPH); 2-ketoglutarate: NADP oxidoreductase, gamma subunit (KorC-like); glutamate synthase 1267503 5613040 Ssed_1067 Shewanella sediminis HAW-EB3 glutamate synthase YP_001472806.1 1265710 D 425104 CDS YP_001472807.1 157374207 5613041 1267500..1269329 1 NC_009831.1 KEGG: eba:ebA4588 2-ketoglutarate: NADP oxidoreductase, alpha subunit; 2-ketoglutarate: NADP oxidoreductase subunit alpha 1269329 5613041 Ssed_1068 Shewanella sediminis HAW-EB3 2-ketoglutarate: NADP oxidoreductase subunit alpha YP_001472807.1 1267500 D 425104 CDS YP_001472808.1 157374208 5613042 1269405..1270457 1 NC_009831.1 catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1270457 5613042 Ssed_1069 Shewanella sediminis HAW-EB3 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_001472808.1 1269405 D 425104 CDS YP_001472809.1 157374209 5613043 complement(1270587..1271285) 1 NC_009831.1 hypothetical protein 1271285 5613043 Ssed_1070 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472809.1 1270587 R 425104 CDS YP_001472810.1 157374210 5613020 complement(1272113..1272535) 1 NC_009831.1 KEGG: tbd:Tbd_1574 hypothetical protein; hypothetical protein 1272535 5613020 Ssed_1071 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472810.1 1272113 R 425104 CDS YP_001472811.1 157374211 5610993 complement(1273107..1274945) 1 NC_009831.1 KEGG: slo:Shew_0996 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 1274945 5610993 Ssed_1072 Shewanella sediminis HAW-EB3 RpoD family RNA polymerase sigma factor YP_001472811.1 1273107 R 425104 CDS YP_001472812.1 157374212 5613022 complement(1275068..1276789) 1 NC_009831.1 KEGG: slo:Shew_0997 DNA primase; DNA primase 1276789 5613022 Ssed_1073 Shewanella sediminis HAW-EB3 DNA primase YP_001472812.1 1275068 R 425104 CDS YP_001472813.1 157374213 5613023 complement(1276887..1277330) 1 NC_009831.1 KEGG: slo:Shew_0998 GatB/YqeY domain protein; GatB/YqeY domain-containing protein 1277330 5613023 Ssed_1074 Shewanella sediminis HAW-EB3 GatB/YqeY domain-containing protein YP_001472813.1 1276887 R 425104 CDS YP_001472814.1 157374214 5612996 complement(1277337..1277552) 1 NC_009831.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1277552 rpsU 5612996 rpsU Shewanella sediminis HAW-EB3 30S ribosomal protein S21 YP_001472814.1 1277337 R 425104 CDS YP_001472815.1 157374215 5612997 1277942..1278955 1 NC_009831.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1278955 5612997 Ssed_1076 Shewanella sediminis HAW-EB3 DNA-binding/iron metalloprotein/AP endonuclease YP_001472815.1 1277942 D 425104 CDS YP_001472816.1 157374216 5612998 complement(1279100..1279702) 1 NC_009831.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 1279702 5612998 Ssed_1077 Shewanella sediminis HAW-EB3 glycerol-3-phosphate acyltransferase PlsY YP_001472816.1 1279100 R 425104 CDS YP_001472817.1 157374217 5612999 1280011..1280364 1 NC_009831.1 KEGG: slo:Shew_1002 dihydroneopterin aldolase; dihydroneopterin aldolase 1280364 5612999 Ssed_1078 Shewanella sediminis HAW-EB3 dihydroneopterin aldolase YP_001472817.1 1280011 D 425104 CDS YP_001472818.1 157374218 5612899 1280365..1280862 1 NC_009831.1 KEGG: slo:Shew_1003 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1280862 5612899 Ssed_1079 Shewanella sediminis HAW-EB3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001472818.1 1280365 D 425104 CDS YP_001472819.1 157374219 5612900 1280961..1281761 1 NC_009831.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 1281761 5612900 Ssed_1080 Shewanella sediminis HAW-EB3 UDP pyrophosphate phosphatase YP_001472819.1 1280961 D 425104 CDS YP_001472820.1 157374220 5612901 1281820..1282716 1 NC_009831.1 KEGG: slo:Shew_1005 rRNA (guanine-N(1)-)-methyltransferase; rRNA (guanine-N(1)-)-methyltransferase 1282716 5612901 Ssed_1081 Shewanella sediminis HAW-EB3 rRNA (guanine-N(1)-)-methyltransferase YP_001472820.1 1281820 D 425104 CDS YP_001472821.1 157374221 5612902 1282834..1283835 1 NC_009831.1 KEGG: slo:Shew_1006 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1283835 5612902 Ssed_1082 Shewanella sediminis HAW-EB3 ErfK/YbiS/YcfS/YnhG family protein YP_001472821.1 1282834 D 425104 CDS YP_001472822.1 157374222 5612601 complement(1284101..1284367) 1 NC_009831.1 KEGG: slo:Shew_1007 major outer membrane lipoprotein; major outer membrane lipoprotein 1284367 5612601 Ssed_1083 Shewanella sediminis HAW-EB3 major outer membrane lipoprotein YP_001472822.1 1284101 R 425104 CDS YP_001472823.1 157374223 5612602 complement(1284578..1285819) 1 NC_009831.1 KEGG: sbl:Sbal_1155 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1285819 5612602 Ssed_1084 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001472823.1 1284578 R 425104 CDS YP_001472824.1 157374224 5612603 1286031..1287656 1 NC_009831.1 KEGG: slo:Shew_1009 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 1287656 5612603 Ssed_1085 Shewanella sediminis HAW-EB3 peptidoglycan binding domain-containing protein YP_001472824.1 1286031 D 425104 CDS YP_001472825.1 157374225 5612604 1287656..1288675 1 NC_009831.1 KEGG: slo:Shew_1010 general secretion pathway protein B; general secretion pathway protein B 1288675 5612604 Ssed_1086 Shewanella sediminis HAW-EB3 general secretion pathway protein B YP_001472825.1 1287656 D 425104 CDS YP_001472826.1 157374226 5612421 complement(1288749..1289996) 1 NC_009831.1 KEGG: shw:Sputw3181_3046 citrate transporter; citrate transporter 1289996 5612421 Ssed_1087 Shewanella sediminis HAW-EB3 citrate transporter YP_001472826.1 1288749 R 425104 CDS YP_001472827.1 157374227 5612422 complement(1290554..1291840) 1 NC_009831.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1291840 5612422 Ssed_1088 Shewanella sediminis HAW-EB3 glutamate-1-semialdehyde aminotransferase YP_001472827.1 1290554 R 425104 CDS YP_001472828.1 157374228 5612423 complement(1291868..1292887) 1 NC_009831.1 Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate; aspartate carbamoyltransferase 1292887 5612423 Ssed_1089 Shewanella sediminis HAW-EB3 aspartate carbamoyltransferase YP_001472828.1 1291868 R 425104 CDS YP_001472829.1 157374229 5612424 1293325..1293828 1 NC_009831.1 hypothetical protein 1293828 5612424 Ssed_1090 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472829.1 1293325 D 425104 CDS YP_001472830.1 157374230 5612177 1294091..1295548 1 NC_009831.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 1295548 aspA 5612177 aspA Shewanella sediminis HAW-EB3 aspartate ammonia-lyase YP_001472830.1 1294091 D 425104 CDS YP_001472831.1 157374231 5612178 complement(1295679..1296239) 1 NC_009831.1 KEGG: shw:Sputw3181_0453 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 1296239 5612178 Ssed_1092 Shewanella sediminis HAW-EB3 NAD(P)H dehydrogenase (quinone) YP_001472831.1 1295679 R 425104 CDS YP_001472832.1 157374232 5612179 complement(1296854..1298563) 1 NC_009831.1 KEGG: slo:Shew_1015 Cl-channel, voltage-gated family protein; Cl-channel, voltage-gated family protein 1298563 5612179 Ssed_1093 Shewanella sediminis HAW-EB3 Cl-channel, voltage-gated family protein YP_001472832.1 1296854 R 425104 CDS YP_001472833.1 157374233 5612180 1298660..1299499 1 NC_009831.1 KEGG: slo:Shew_1016 hypothetical protein; hypothetical protein 1299499 5612180 Ssed_1094 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472833.1 1298660 D 425104 CDS YP_001472834.1 157374234 5612254 1299626..1299988 1 NC_009831.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 1299988 5612254 Ssed_1095 Shewanella sediminis HAW-EB3 iron-sulfur cluster insertion protein ErpA YP_001472834.1 1299626 D 425104 CDS YP_001472835.1 157374235 5612255 complement(1300071..1300589) 1 NC_009831.1 KEGG: slo:Shew_1018 hypothetical protein; hypothetical protein 1300589 5612255 Ssed_1096 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472835.1 1300071 R 425104 CDS YP_001472836.1 157374236 5612256 complement(1300601..1300972) 1 NC_009831.1 KEGG: slo:Shew_1019 hypothetical protein; hypothetical protein 1300972 5612256 Ssed_1097 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472836.1 1300601 R 425104 CDS YP_001472837.1 157374237 5612257 complement(1301267..1302688) 1 NC_009831.1 KEGG: vpa:VPA1073 alkaline phosphatase; alkaline phosphatase 1302688 5612257 Ssed_1098 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001472837.1 1301267 R 425104 CDS YP_001472838.1 157374238 5612101 complement(1302713..1305289) 1 NC_009831.1 KEGG: shn:Shewana3_3062 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 1305289 5612101 Ssed_1099 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001472838.1 1302713 R 425104 CDS YP_001472839.1 157374239 5612102 complement(1305410..1308178) 1 NC_009831.1 KEGG: vvy:VV0250 outer membrane receptor protein; outer membrane receptor protein 1308178 5612102 Ssed_1100 Shewanella sediminis HAW-EB3 outer membrane receptor protein YP_001472839.1 1305410 R 425104 CDS YP_001472840.1 157374240 5612103 1308533..1310674 1 NC_009831.1 KEGG: shm:Shewmr7_2965 transcriptional regulator domain protein; transcriptional regulator domain-containing protein 1310674 5612103 Ssed_1101 Shewanella sediminis HAW-EB3 transcriptional regulator domain-containing protein YP_001472840.1 1308533 D 425104 CDS YP_001472841.1 157374241 5612104 complement(1311098..1312207) 1 NC_009831.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1312207 anmK 5612104 anmK Shewanella sediminis HAW-EB3 anhydro-N-acetylmuramic acid kinase YP_001472841.1 1311098 R 425104 CDS YP_001472842.1 157374242 5612148 complement(1312362..1313789) 1 NC_009831.1 KEGG: slo:Shew_1021 peptidase M23B; peptidase M23B 1313789 5612148 Ssed_1103 Shewanella sediminis HAW-EB3 peptidase M23B YP_001472842.1 1312362 R 425104 CDS YP_001472843.1 157374243 5612149 1313930..1315126 1 NC_009831.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1315126 5612149 Ssed_1104 Shewanella sediminis HAW-EB3 tyrosyl-tRNA synthetase YP_001472843.1 1313930 D 425104 CDS YP_001472844.1 157374244 5612150 complement(1315279..1316913) 1 NC_009831.1 KEGG: cps:CPS_3369 proton/peptide symporter family protein; alkaline phosphatase 1316913 5612150 Ssed_1105 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001472844.1 1315279 R 425104 CDS YP_001472845.1 157374245 5612151 complement(1317485..1319014) 1 NC_009831.1 KEGG: sil:SPOA0154 hypothetical protein; hypothetical protein 1319014 5612151 Ssed_1106 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472845.1 1317485 R 425104 CDS YP_001472846.1 157374246 5611906 complement(1319016..1320269) 1 NC_009831.1 KEGG: sil:SPOA0152 di-haem cytochrome c peroxidase family protein; cytochrome-c peroxidase 1320269 5611906 Ssed_1107 Shewanella sediminis HAW-EB3 cytochrome-c peroxidase YP_001472846.1 1319016 R 425104 CDS YP_001472847.1 157374247 5611907 complement(1320278..1321024) 1 NC_009831.1 KEGG: pat:Patl_1721 cytochrome c, class I; hypothetical protein 1321024 5611907 Ssed_1108 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472847.1 1320278 R 425104 CDS YP_001472848.1 157374248 5611908 complement(1321140..1322198) 1 NC_009831.1 KEGG: bja:blr0814 transcriptional regulatory protein; hypothetical protein 1322198 5611908 Ssed_1109 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472848.1 1321140 R 425104 CDS YP_001472849.1 157374249 5611909 complement(1322401..1324989) 1 NC_009831.1 KEGG: mmr:Mmar10_1982 TonB-dependent receptor, plug; Outer membrane receptor protein mostly Fe transport-like protein 1324989 5611909 Ssed_1110 Shewanella sediminis HAW-EB3 Outer membrane receptor protein mostly Fe transport-like protein YP_001472849.1 1322401 R 425104 CDS YP_001472850.1 157374250 5611844 complement(1325454..1325933) 1 NC_009831.1 KEGG: slo:Shew_1023 hypothetical protein; hypothetical protein 1325933 5611844 Ssed_1111 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472850.1 1325454 R 425104 CDS YP_001472851.1 157374251 5611845 complement(1325930..1326556) 1 NC_009831.1 KEGG: slo:Shew_1024 protein of unknown function UPF0126; hypothetical protein 1326556 5611845 Ssed_1112 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472851.1 1325930 R 425104 CDS YP_001472852.1 157374252 5611846 complement(1326553..1326993) 1 NC_009831.1 KEGG: slo:Shew_1025 hypothetical protein; hypothetical protein 1326993 5611846 Ssed_1113 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472852.1 1326553 R 425104 CDS YP_001472853.1 157374253 5611847 complement(1327060..1328043) 1 NC_009831.1 KEGG: spc:Sputcn32_1133 cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CbiB 1328043 5611847 Ssed_1114 Shewanella sediminis HAW-EB3 cobalamin biosynthesis protein CbiB YP_001472853.1 1327060 R 425104 CDS YP_001472854.1 157374254 5611595 complement(1328071..1328763) 1 NC_009831.1 KEGG: shn:Shewana3_3052 purine and other phosphorylases, family 1; adenosylhomocysteine nucleosidase 1328763 5611595 Ssed_1115 Shewanella sediminis HAW-EB3 adenosylhomocysteine nucleosidase YP_001472854.1 1328071 R 425104 CDS YP_001472855.1 157374255 5611596 1329077..1330384 1 NC_009831.1 KEGG: vfi:VFA0056 hypothetical protein; hypothetical protein 1330384 5611596 Ssed_1116 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472855.1 1329077 D 425104 CDS YP_001472856.1 157374256 5611597 complement(1330518..1331222) 1 NC_009831.1 KEGG: sfr:Sfri_1944 hypothetical protein; hypothetical protein 1331222 5611597 Ssed_1117 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472856.1 1330518 R 425104 CDS YP_001472857.1 157374257 5611598 complement(1331241..1332458) 1 NC_009831.1 KEGG: sfr:Sfri_1945 transporter, BCCT family protein; transporter, BCCT family protein 1332458 5611598 Ssed_1118 Shewanella sediminis HAW-EB3 transporter, BCCT family protein YP_001472857.1 1331241 R 425104 CDS YP_001472858.1 157374258 5611607 complement(1332689..1334383) 1 NC_009831.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1334383 5611607 Ssed_1119 Shewanella sediminis HAW-EB3 choline dehydrogenase YP_001472858.1 1332689 R 425104 CDS YP_001472859.1 157374259 5611608 complement(1334393..1335856) 1 NC_009831.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1335856 5611608 Ssed_1120 Shewanella sediminis HAW-EB3 betaine aldehyde dehydrogenase YP_001472859.1 1334393 R 425104 CDS YP_001472860.1 157374260 5611609 complement(1335847..1336452) 1 NC_009831.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1336452 5611609 Ssed_1121 Shewanella sediminis HAW-EB3 transcriptional regulator BetI YP_001472860.1 1335847 R 425104 CDS YP_001472861.1 157374261 5611610 1337070..1338044 1 NC_009831.1 KEGG: sfr:Sfri_3408 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1338044 5611610 Ssed_1122 Shewanella sediminis HAW-EB3 inosine/uridine-preferring nucleoside hydrolase YP_001472861.1 1337070 D 425104 CDS YP_001472862.1 157374262 5612650 complement(1338557..1338895) 1 NC_009831.1 KEGG: ppr:PBPRB1305 hypothetical protein; hypothetical protein 1338895 5612650 Ssed_1123 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472862.1 1338557 R 425104 CDS YP_001472863.1 157374263 5612651 complement(1339388..1340599) 1 NC_009831.1 KEGG: sfr:Sfri_3407 ribokinase; ribokinase 1340599 5612651 Ssed_1124 Shewanella sediminis HAW-EB3 ribokinase YP_001472863.1 1339388 R 425104 CDS YP_001472864.1 157374264 5612652 complement(1340857..1342266) 1 NC_009831.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1342266 gltD 5612652 gltD Shewanella sediminis HAW-EB3 glutamate synthase subunit beta YP_001472864.1 1340857 R 425104 CDS YP_001472865.1 157374265 5612653 complement(1342273..1346721) 1 NC_009831.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 1346721 gltB 5612653 gltB Shewanella sediminis HAW-EB3 glutamate synthase subunit alpha YP_001472865.1 1342273 R 425104 CDS YP_001472866.1 157374266 5611482 1347232..1348158 1 NC_009831.1 KEGG: slo:Shew_1033 conserved hypothetical radical SAM protein; radical SAM protein 1348158 5611482 Ssed_1127 Shewanella sediminis HAW-EB3 radical SAM protein YP_001472866.1 1347232 D 425104 CDS YP_001472867.1 157374267 5611483 1348333..1348698 1 NC_009831.1 KEGG: slo:Shew_1034 Hpt protein; Hpt protein 1348698 5611483 Ssed_1128 Shewanella sediminis HAW-EB3 Hpt protein YP_001472867.1 1348333 D 425104 CDS YP_001472868.1 157374268 5611484 1349006..1349917 1 NC_009831.1 KEGG: slo:Shew_1035 transcriptional regulator, LysR family; LysR family transcriptional regulator 1349917 5611484 Ssed_1129 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472868.1 1349006 D 425104 CDS YP_001472869.1 157374269 5611485 complement(1350023..1351096) 1 NC_009831.1 KEGG: sbl:Sbal_1182 adenylate/guanylate cyclase; adenylate/guanylate cyclase 1351096 5611485 Ssed_1130 Shewanella sediminis HAW-EB3 adenylate/guanylate cyclase YP_001472869.1 1350023 R 425104 CDS YP_001472870.1 157374270 5613766 complement(1351390..1352064) 1 NC_009831.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 1352064 5613766 Ssed_1131 Shewanella sediminis HAW-EB3 DNA mismatch repair protein YP_001472870.1 1351390 R 425104 CDS YP_001472871.1 157374271 5613767 1352758..1353276 1 NC_009831.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1353276 5613767 Ssed_1132 Shewanella sediminis HAW-EB3 dinucleoside polyphosphate hydrolase YP_001472871.1 1352758 D 425104 CDS YP_001472872.1 157374272 5613768 1353349..1355583 1 NC_009831.1 KEGG: slo:Shew_1039 PTSINtr with GAF domain, PtsP; phosphoenolpyruvate-protein phosphotransferase PtsP 1355583 5613768 Ssed_1133 Shewanella sediminis HAW-EB3 phosphoenolpyruvate-protein phosphotransferase PtsP YP_001472872.1 1353349 D 425104 CDS YP_001472873.1 157374273 5613769 1355690..1356493 1 NC_009831.1 KEGG: sbl:Sbal_1186 protein of unknown function DUF81; hypothetical protein 1356493 5613769 Ssed_1134 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472873.1 1355690 D 425104 CDS YP_001472874.1 157374274 5610247 1356653..1357504 1 NC_009831.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1357504 thyA 5610247 thyA Shewanella sediminis HAW-EB3 thymidylate synthase YP_001472874.1 1356653 D 425104 CDS YP_001472875.1 157374275 5610248 1357815..1359014 1 NC_009831.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1359014 nhaA 5610248 nhaA Shewanella sediminis HAW-EB3 pH-dependent sodium/proton antiporter YP_001472875.1 1357815 D 425104 CDS YP_001472876.1 157374276 5610249 1359011..1359394 1 NC_009831.1 KEGG: slo:Shew_1043 hypothetical protein; hypothetical protein 1359394 5610249 Ssed_1137 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472876.1 1359011 D 425104 CDS YP_001472877.1 157374277 5610250 1359421..1360329 1 NC_009831.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 1360329 nhaR 5610250 nhaR Shewanella sediminis HAW-EB3 transcriptional activator NhaR YP_001472877.1 1359421 D 425104 CDS YP_001472878.1 157374278 5613794 1360387..1360638 1 NC_009831.1 KEGG: slo:Shew_1045 protein of unknown function DUF339; hypothetical protein 1360638 5613794 Ssed_1139 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472878.1 1360387 D 425104 CDS YP_001472879.1 157374279 5613795 1360619..1361050 1 NC_009831.1 KEGG: sbl:Sbal_1193 hypothetical protein; hypothetical protein 1361050 5613795 Ssed_1140 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472879.1 1360619 D 425104 CDS YP_001472880.1 157374280 5613796 complement(1361107..1362717) 1 NC_009831.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1362717 5613796 Ssed_1141 Shewanella sediminis HAW-EB3 L-aspartate oxidase YP_001472880.1 1361107 R 425104 CDS YP_001472881.1 157374281 5613797 1362918..1363496 1 NC_009831.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1363496 5613797 Ssed_1142 Shewanella sediminis HAW-EB3 RNA polymerase sigma factor RpoE YP_001472881.1 1362918 D 425104 CDS YP_001472882.1 157374282 5610975 1363524..1364144 1 NC_009831.1 KEGG: slo:Shew_1049 anti sigma-E protein, RseA; anti sigma-E protein, RseA 1364144 5610975 Ssed_1143 Shewanella sediminis HAW-EB3 anti sigma-E protein, RseA YP_001472882.1 1363524 D 425104 CDS YP_001472883.1 157374283 5610976 1364174..1365106 1 NC_009831.1 KEGG: slo:Shew_1050 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein MucB/RseB 1365106 5610976 Ssed_1144 Shewanella sediminis HAW-EB3 sigma E regulatory protein MucB/RseB YP_001472883.1 1364174 D 425104 CDS YP_001472884.1 157374284 5610977 1365131..1365586 1 NC_009831.1 KEGG: slo:Shew_1051 positive regulator of sigma E, RseC/MucC; sigma E positive regulator RseC/MucC 1365586 5610977 Ssed_1145 Shewanella sediminis HAW-EB3 sigma E positive regulator RseC/MucC YP_001472884.1 1365131 D 425104 CDS YP_001472885.1 157374285 5610978 1365715..1367505 1 NC_009831.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1367505 5610978 Ssed_1146 Shewanella sediminis HAW-EB3 GTP-binding protein LepA YP_001472885.1 1365715 D 425104 CDS YP_001472886.1 157374286 5610296 1367673..1368590 1 NC_009831.1 KEGG: slo:Shew_1053 signal peptidase I; Signal peptidase I 1368590 5610296 Ssed_1147 Shewanella sediminis HAW-EB3 Signal peptidase I YP_001472886.1 1367673 D 425104 CDS YP_001472887.1 157374287 5610297 1368592..1369269 1 NC_009831.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1369269 rnc 5610297 rnc Shewanella sediminis HAW-EB3 ribonuclease III YP_001472887.1 1368592 D 425104 CDS YP_001472888.1 157374288 5610298 1369266..1370273 1 NC_009831.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1370273 era 5610298 era Shewanella sediminis HAW-EB3 GTP-binding protein Era YP_001472888.1 1369266 D 425104 CDS YP_001472889.1 157374289 5610299 1370385..1371065 1 NC_009831.1 KEGG: slo:Shew_1056 DNA repair protein RecO; DNA repair protein RecO 1371065 5610299 Ssed_1150 Shewanella sediminis HAW-EB3 DNA repair protein RecO YP_001472889.1 1370385 D 425104 CDS YP_001472890.1 157374290 5610372 1371193..1371930 1 NC_009831.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1371930 5610372 Ssed_1151 Shewanella sediminis HAW-EB3 pyridoxine 5'-phosphate synthase YP_001472890.1 1371193 D 425104 CDS YP_001472891.1 157374291 5610373 1372006..1372404 1 NC_009831.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1372404 acpS 5610373 acpS Shewanella sediminis HAW-EB3 4'-phosphopantetheinyl transferase YP_001472891.1 1372006 D 425104 CDS YP_001472892.1 157374292 5610374 1373377..1373601 1 NC_009831.1 KEGG: vvu:VV1_2415 probable riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 1373601 5610374 Ssed_1153 Shewanella sediminis HAW-EB3 riboflavin biosynthesis protein RibD YP_001472892.1 1373377 D 425104 CDS YP_001472893.1 157374293 5609876 complement(1373792..1374814) 1 NC_009831.1 KEGG: ppu:PP_4405 sensory box protein; sensory box protein 1374814 5609876 Ssed_1154 Shewanella sediminis HAW-EB3 sensory box protein YP_001472893.1 1373792 R 425104 CDS YP_001472894.1 157374294 5609877 1375082..1375627 1 NC_009831.1 KEGG: slo:Shew_1059 protein of unknown function DUF962; hypothetical protein 1375627 5609877 Ssed_1155 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472894.1 1375082 D 425104 CDS YP_001472895.1 157374295 5609878 complement(1375764..1377059) 1 NC_009831.1 KEGG: slo:Shew_1060 protein of unknown function DUF21; hypothetical protein 1377059 5609878 Ssed_1156 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472895.1 1375764 R 425104 CDS YP_001472896.1 157374296 5609879 complement(1377246..1378034) 1 NC_009831.1 KEGG: slo:Shew_1061 cytochrome c assembly protein; cytochrome c assembly protein 1378034 5609879 Ssed_1157 Shewanella sediminis HAW-EB3 cytochrome c assembly protein YP_001472896.1 1377246 R 425104 CDS YP_001472897.1 157374297 5614037 1378460..1379833 1 NC_009831.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 1379833 5614037 Ssed_1158 Shewanella sediminis HAW-EB3 signal recognition particle protein YP_001472897.1 1378460 D 425104 CDS YP_001472898.1 157374298 5614038 1380135..1380386 1 NC_009831.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1380386 rpsP 5614038 rpsP Shewanella sediminis HAW-EB3 30S ribosomal protein S16 YP_001472898.1 1380135 D 425104 CDS YP_001472899.1 157374299 5614039 1380407..1380937 1 NC_009831.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1380937 rimM 5614039 rimM Shewanella sediminis HAW-EB3 16S rRNA-processing protein RimM YP_001472899.1 1380407 D 425104 CDS YP_001472900.1 157374300 5614040 1380953..1381681 1 NC_009831.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1381681 trmD 5614040 trmD Shewanella sediminis HAW-EB3 tRNA (guanine-N(1)-)-methyltransferase YP_001472900.1 1380953 D 425104 CDS YP_001472901.1 157374301 5613818 1381735..1382088 1 NC_009831.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1382088 rplS 5613818 rplS Shewanella sediminis HAW-EB3 50S ribosomal protein L19 YP_001472901.1 1381735 D 425104 CDS YP_001472902.1 157374302 5613819 1382435..1383526 1 NC_009831.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1383526 5613819 Ssed_1163 Shewanella sediminis HAW-EB3 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001472902.1 1382435 D 425104 CDS YP_001472903.1 157374303 5613820 1383603..1384742 1 NC_009831.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1384742 tyrA 5613820 tyrA Shewanella sediminis HAW-EB3 bifunctional chorismate mutase/prephenate dehydrogenase YP_001472903.1 1383603 D 425104 CDS YP_001472904.1 157374304 5614052 1385259..1386917 1 NC_009831.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1386917 5614052 Ssed_1165 Shewanella sediminis HAW-EB3 hydroxylamine reductase YP_001472904.1 1385259 D 425104 CDS YP_001472905.1 157374305 5614053 1387039..1388142 1 NC_009831.1 KEGG: slo:Shew_1070 oxidoreductase FAD-binding domain protein; oxidoreductase FAD-binding subunit 1388142 5614053 Ssed_1166 Shewanella sediminis HAW-EB3 oxidoreductase FAD-binding subunit YP_001472905.1 1387039 D 425104 CDS YP_001472906.1 157374306 5614054 1388253..1388588 1 NC_009831.1 KEGG: son:SO1365 hypothetical protein; hypothetical protein 1388588 5614054 Ssed_1167 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472906.1 1388253 D 425104 CDS YP_001472907.1 157374307 5614055 complement(1388645..1390633) 1 NC_009831.1 KEGG: slo:Shew_1072 chorismate mutase; chorismate mutase 1390633 5614055 Ssed_1168 Shewanella sediminis HAW-EB3 chorismate mutase YP_001472907.1 1388645 R 425104 CDS YP_001472908.1 157374308 5612144 complement(1391688..1392050) 1 NC_009831.1 KEGG: son:SO3422 ribosomal subunit interface protein; ribosomal subunit interface protein 1392050 5612144 Ssed_1169 Shewanella sediminis HAW-EB3 ribosomal subunit interface protein YP_001472908.1 1391688 R 425104 CDS YP_001472909.1 157374309 5612145 1392341..1393009 1 NC_009831.1 KEGG: she:Shewmr4_1133 cytochrome b561; cytochrome b561 1393009 5612145 Ssed_1170 Shewanella sediminis HAW-EB3 cytochrome b561 YP_001472909.1 1392341 D 425104 CDS YP_001472910.1 157374310 5612146 complement(1393127..1393588) 1 NC_009831.1 KEGG: slo:Shew_1075 cytochrome c, class II; cytochrome c, class II 1393588 5612146 Ssed_1171 Shewanella sediminis HAW-EB3 cytochrome c, class II YP_001472910.1 1393127 R 425104 CDS YP_001472911.1 157374311 5612147 1393827..1394105 1 NC_009831.1 KEGG: slo:Shew_1076 Trp operon repressor; Trp operon repressor 1394105 5612147 Ssed_1172 Shewanella sediminis HAW-EB3 Trp operon repressor YP_001472911.1 1393827 D 425104 CDS YP_001472912.1 157374312 5611501 complement(1394109..1394495) 1 NC_009831.1 KEGG: son:SO3418 hypothetical protein; hypothetical protein 1394495 5611501 Ssed_1173 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472912.1 1394109 R 425104 CDS YP_001472913.1 157374313 5611502 complement(1394678..1395307) 1 NC_009831.1 KEGG: slo:Shew_1078 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 1395307 5611502 Ssed_1174 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001472913.1 1394678 R 425104 CDS YP_001472914.1 157374314 5611503 1396031..1398496 1 NC_009831.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 1398496 thrA 5611503 thrA Shewanella sediminis HAW-EB3 bifunctional aspartokinase I/homoserine dehydrogenase I YP_001472914.1 1396031 D 425104 CDS YP_001472915.1 157374315 5612312 1398493..1399431 1 NC_009831.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1399431 5612312 Ssed_1176 Shewanella sediminis HAW-EB3 homoserine kinase YP_001472915.1 1398493 D 425104 CDS YP_001472916.1 157374316 5612313 1399502..1400782 1 NC_009831.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1400782 5612313 Ssed_1177 Shewanella sediminis HAW-EB3 threonine synthase YP_001472916.1 1399502 D 425104 CDS YP_001472917.1 157374317 5612314 1401318..1401611 1 NC_009831.1 KEGG: sbl:Sbal_1230 hypothetical protein; hypothetical protein 1401611 5612314 Ssed_1178 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472917.1 1401318 D 425104 CDS YP_001472918.1 157374318 5612315 complement(1401699..1402559) 1 NC_009831.1 KEGG: slo:Shew_1083 apurinic endonuclease Apn1; deoxyribonuclease IV (phage-T(4)-induced) 1402559 5612315 Ssed_1179 Shewanella sediminis HAW-EB3 deoxyribonuclease IV (phage-T(4)-induced) YP_001472918.1 1401699 R 425104 CDS YP_001472919.1 157374319 5612316 1402674..1404752 1 NC_009831.1 KEGG: slo:Shew_1084 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 1404752 5612316 Ssed_1180 Shewanella sediminis HAW-EB3 PAS/PAC sensor hybrid histidine kinase YP_001472919.1 1402674 D 425104 CDS YP_001472920.1 157374320 5612317 1404834..1405928 1 NC_009831.1 KEGG: slo:Shew_1085 response regulator receiver protein; response regulator receiver protein 1405928 5612317 Ssed_1181 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001472920.1 1404834 D 425104 CDS YP_001472921.1 157374321 5612318 1406065..1406610 1 NC_009831.1 KEGG: shw:Sputw3181_3119 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 1406610 5612318 Ssed_1182 Shewanella sediminis HAW-EB3 hemerythrin HHE cation binding domain-containing protein YP_001472921.1 1406065 D 425104 CDS YP_001472922.1 157374322 5612319 complement(1406905..1407090) 1 NC_009831.1 KEGG: slo:Shew_1087 hypothetical protein; hypothetical protein 1407090 5612319 Ssed_1183 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472922.1 1406905 R 425104 CDS YP_001472923.1 157374323 5612298 complement(1407316..1408953) 1 NC_009831.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1408953 pgi 5612298 pgi Shewanella sediminis HAW-EB3 glucose-6-phosphate isomerase YP_001472923.1 1407316 R 425104 CDS YP_001472924.1 157374324 5612299 complement(1408967..1409923) 1 NC_009831.1 KEGG: slo:Shew_1089 transaldolase; transaldolase B 1409923 5612299 Ssed_1185 Shewanella sediminis HAW-EB3 transaldolase B YP_001472924.1 1408967 R 425104 CDS YP_001472925.1 157374325 5612300 complement(1410491..1412857) 1 NC_009831.1 KEGG: sbl:Sbal_1046 phosphoketolase; phosphoketolase 1412857 5612300 Ssed_1186 Shewanella sediminis HAW-EB3 phosphoketolase YP_001472925.1 1410491 R 425104 CDS YP_001472926.1 157374326 5612692 1413288..1414739 1 NC_009831.1 KEGG: slo:Shew_1092 amino acid carrier protein; amino acid carrier protein 1414739 5612692 Ssed_1187 Shewanella sediminis HAW-EB3 amino acid carrier protein YP_001472926.1 1413288 D 425104 CDS YP_001472927.1 157374327 5612693 1414875..1415648 1 NC_009831.1 KEGG: slo:Shew_1093 protein of unknown function DUF328; hypothetical protein 1415648 5612693 Ssed_1188 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472927.1 1414875 D 425104 CDS YP_001472928.1 157374328 5612694 complement(1415748..1417181) 1 NC_009831.1 KEGG: slo:Shew_1094 peptidase M28; peptidase M28 1417181 5612694 Ssed_1189 Shewanella sediminis HAW-EB3 peptidase M28 YP_001472928.1 1415748 R 425104 CDS YP_001472929.1 157374329 5612695 1417317..1417613 1 NC_009831.1 KEGG: slo:Shew_1095 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 1417613 5612695 Ssed_1190 Shewanella sediminis HAW-EB3 ArsR family transcriptional regulator YP_001472929.1 1417317 D 425104 CDS YP_001472930.1 157374330 5613821 complement(1417753..1418019) 1 NC_009831.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1418019 rpsT 5613821 rpsT Shewanella sediminis HAW-EB3 30S ribosomal protein S20 YP_001472930.1 1417753 R 425104 CDS YP_001472931.1 157374331 5613822 1418267..1419826 1 NC_009831.1 KEGG: slo:Shew_1097 integral membrane protein MviN; integral membrane protein MviN 1419826 5613822 Ssed_1192 Shewanella sediminis HAW-EB3 integral membrane protein MviN YP_001472931.1 1418267 D 425104 CDS YP_001472932.1 157374332 5613823 1419924..1420859 1 NC_009831.1 KEGG: slo:Shew_1098 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 1420859 5613823 Ssed_1193 Shewanella sediminis HAW-EB3 riboflavin biosynthesis protein RibF YP_001472932.1 1419924 D 425104 CDS YP_001472933.1 157374333 5613824 1420891..1423713 1 NC_009831.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1423713 ileS 5613824 ileS Shewanella sediminis HAW-EB3 isoleucyl-tRNA synthetase YP_001472933.1 1420891 D 425104 CDS YP_001472934.1 157374334 5613194 1423851..1424381 1 NC_009831.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1424381 lspA 5613194 lspA Shewanella sediminis HAW-EB3 lipoprotein signal peptidase YP_001472934.1 1423851 D 425104 CDS YP_001472935.1 157374335 5613195 1424387..1424809 1 NC_009831.1 KEGG: slo:Shew_1101 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 1424809 5613195 Ssed_1196 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001472935.1 1424387 D 425104 CDS YP_001472936.1 157374336 5613196 1424813..1425760 1 NC_009831.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1425760 ispH 5613196 ispH Shewanella sediminis HAW-EB3 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001472936.1 1424813 D 425104 CDS YP_001472937.1 157374337 5612627 1426002..1426523 1 NC_009831.1 KEGG: slo:Shew_1103 type IV pilus modification protein PilV; type IV pilus modification protein PilV 1426523 5612627 Ssed_1198 Shewanella sediminis HAW-EB3 type IV pilus modification protein PilV YP_001472937.1 1426002 D 425104 CDS YP_001472938.1 157374338 5612628 1426524..1427510 1 NC_009831.1 KEGG: shn:Shewana3_3131 prepilin-type cleavage/methylation-like protein; prepilin-type cleavage/methylation-like protein 1427510 5612628 Ssed_1199 Shewanella sediminis HAW-EB3 prepilin-type cleavage/methylation-like protein YP_001472938.1 1426524 D 425104 CDS YP_001472939.1 157374339 5612629 1427523..1427957 1 NC_009831.1 KEGG: slo:Shew_1105 type IV pilus assembly protein PilX; type IV pilus assembly protein PilX 1427957 5612629 Ssed_1200 Shewanella sediminis HAW-EB3 type IV pilus assembly protein PilX YP_001472939.1 1427523 D 425104 CDS YP_001472940.1 157374340 5612630 1427962..1431537 1 NC_009831.1 KEGG: slo:Shew_1106 type IV pilin biogenesis protein; type IV pilin biogenesis protein 1431537 5612630 Ssed_1201 Shewanella sediminis HAW-EB3 type IV pilin biogenesis protein YP_001472940.1 1427962 D 425104 CDS YP_001472941.1 157374341 5611618 1431537..1431929 1 NC_009831.1 KEGG: saz:Sama_0932 type IV pilus biogenesis protein PilE; type IV pilus biogenesis protein PilE 1431929 5611618 Ssed_1202 Shewanella sediminis HAW-EB3 type IV pilus biogenesis protein PilE YP_001472941.1 1431537 D 425104 CDS YP_001472942.1 157374342 5611619 1431926..1432228 1 NC_009831.1 KEGG: shm:Shewmr7_3030 hypothetical protein; hypothetical protein 1432228 5611619 Ssed_1203 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472942.1 1431926 D 425104 CDS YP_001472943.1 157374343 5611620 complement(1432491..1432979) 1 NC_009831.1 KEGG: slo:Shew_1108 methylation site containing protein; methylation site containing protein 1432979 5611620 Ssed_1204 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001472943.1 1432491 R 425104 CDS YP_001472944.1 157374344 5611621 complement(1433115..1433624) 1 NC_009831.1 KEGG: slo:Shew_1109 type IV pilus biogenesis protein; type IV pilus biogenesis protein 1433624 5611621 Ssed_1205 Shewanella sediminis HAW-EB3 type IV pilus biogenesis protein YP_001472944.1 1433115 R 425104 CDS YP_001472945.1 157374345 5613566 1433874..1434212 1 NC_009831.1 KEGG: saz:Sama_0935 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1434212 5613566 Ssed_1206 Shewanella sediminis HAW-EB3 nitrogen regulatory protein P-II YP_001472945.1 1433874 D 425104 CDS YP_001472946.1 157374346 5613567 complement(1434292..1435311) 1 NC_009831.1 KEGG: saz:Sama_0937 transcriptional regulator, LacI family; alanine racemase 1435311 5613567 Ssed_1207 Shewanella sediminis HAW-EB3 alanine racemase YP_001472946.1 1434292 R 425104 CDS YP_001472947.1 157374347 5613568 1435747..1438359 1 NC_009831.1 KEGG: slo:Shew_1112 TonB-dependent receptor; TonB-dependent receptor 1438359 5613568 Ssed_1208 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001472947.1 1435747 D 425104 CDS YP_001472948.1 157374348 5614016 1438522..1440048 1 NC_009831.1 KEGG: slo:Shew_1113 tryptophan halogenase; tryptophan halogenase 1440048 5614016 Ssed_1209 Shewanella sediminis HAW-EB3 tryptophan halogenase YP_001472948.1 1438522 D 425104 CDS YP_001472949.1 157374349 5614017 complement(1440127..1440846) 1 NC_009831.1 KEGG: slo:Shew_1114 SapC family protein; SapC family protein 1440846 5614017 Ssed_1210 Shewanella sediminis HAW-EB3 SapC family protein YP_001472949.1 1440127 R 425104 CDS YP_001472950.1 157374350 5614018 1441694..1444360 1 NC_009831.1 KEGG: slo:Shew_1115 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 1444360 5614018 Ssed_1211 Shewanella sediminis HAW-EB3 beta-N-acetylhexosaminidase YP_001472950.1 1441694 D 425104 CDS YP_001472951.1 157374351 5614019 1444582..1445478 1 NC_009831.1 KEGG: slo:Shew_1116 ATPase, BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase 1445478 5614019 Ssed_1212 Shewanella sediminis HAW-EB3 BadF/BadG/BcrA/BcrD type ATPase YP_001472951.1 1444582 D 425104 CDS YP_001472952.1 157374352 5611309 1445506..1446633 1 NC_009831.1 KEGG: shw:Sputw3181_3087 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 1446633 5611309 Ssed_1213 Shewanella sediminis HAW-EB3 N-acetylglucosamine-6-phosphate deacetylase YP_001472952.1 1445506 D 425104 CDS YP_001472953.1 157374353 5611310 1446738..1447874 1 NC_009831.1 KEGG: shm:Shewmr7_3014 hypothetical protein; hypothetical protein 1447874 5611310 Ssed_1214 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472953.1 1446738 D 425104 CDS YP_001472954.1 157374354 5611311 1448119..1449423 1 NC_009831.1 KEGG: slo:Shew_1119 glucose/galactose transporter; glucose/galactose transporter 1449423 5611311 Ssed_1215 Shewanella sediminis HAW-EB3 glucose/galactose transporter YP_001472954.1 1448119 D 425104 CDS YP_001472955.1 157374355 5610822 1451197..1451748 1 NC_009831.1 KEGG: shw:Sputw3181_1308 cytochrome b561; cytochrome b561 1451748 5610822 Ssed_1216 Shewanella sediminis HAW-EB3 cytochrome b561 YP_001472955.1 1451197 D 425104 CDS YP_001472956.1 157374356 5613946 1451830..1452408 1 NC_009831.1 KEGG: sfr:Sfri_2875 YceI family protein; hypothetical protein 1452408 5613946 Ssed_1217 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472956.1 1451830 D 425104 CDS YP_001472957.1 157374357 5613947 complement(1452564..1452842) 1 NC_009831.1 KEGG: slo:Shew_1122 Fe(II) trafficking protein YggX; hypothetical protein 1452842 5613947 Ssed_1218 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472957.1 1452564 R 425104 CDS YP_001472958.1 157374358 5613948 complement(1452845..1453957) 1 NC_009831.1 KEGG: shw:Sputw3181_1311 A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 1453957 5613948 Ssed_1219 Shewanella sediminis HAW-EB3 A/G-specific adenine glycosylase YP_001472958.1 1452845 R 425104 CDS YP_001472959.1 157374359 5614134 1454173..1454889 1 NC_009831.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1454889 trmB 5614134 trmB Shewanella sediminis HAW-EB3 tRNA (guanine-N(7)-)-methyltransferase YP_001472959.1 1454173 D 425104 CDS YP_001472960.1 157374360 5614135 1454959..1455282 1 NC_009831.1 KEGG: slo:Shew_1125 protein of unknown function DUF469; hypothetical protein 1455282 5614135 Ssed_1221 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472960.1 1454959 D 425104 CDS YP_001472961.1 157374361 5614136 1455282..1456196 1 NC_009831.1 catalyzes the formation of glutamate from glutamine; glutaminase 1456196 5614136 Ssed_1222 Shewanella sediminis HAW-EB3 glutaminase YP_001472961.1 1455282 D 425104 CDS YP_001472962.1 157374362 5614137 1456441..1457274 1 NC_009831.1 KEGG: slo:Shew_1127 hypothetical protein; hypothetical protein 1457274 5614137 Ssed_1223 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472962.1 1456441 D 425104 CDS YP_001472963.1 157374363 5614196 1457703..1458644 1 NC_009831.1 KEGG: slo:Shew_1128 transcriptional regulator, LysR family; carbonate dehydratase 1458644 5614196 Ssed_1224 Shewanella sediminis HAW-EB3 carbonate dehydratase YP_001472963.1 1457703 D 425104 CDS YP_001472964.1 157374364 5614197 complement(1459172..1461013) 1 NC_009831.1 KEGG: slo:Shew_1130 protein of unknown function DUF885; hypothetical protein 1461013 5614197 Ssed_1225 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472964.1 1459172 R 425104 CDS YP_001472965.1 157374365 5614198 complement(1461159..1462295) 1 NC_009831.1 KEGG: shm:Shewmr7_1258 oxygen-independent coproporphyrinogen III oxidase; coproporphyrinogen dehydrogenase 1462295 5614198 Ssed_1226 Shewanella sediminis HAW-EB3 coproporphyrinogen dehydrogenase YP_001472965.1 1461159 R 425104 CDS YP_001472966.1 157374366 5614199 complement(1462438..1463040) 1 NC_009831.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 1463040 5614199 Ssed_1227 Shewanella sediminis HAW-EB3 deoxyribonucleotide triphosphate pyrophosphatase YP_001472966.1 1462438 R 425104 CDS YP_001472967.1 157374367 5614168 complement(1463240..1463674) 1 NC_009831.1 KEGG: slo:Shew_1133 hypothetical protein; hypothetical protein 1463674 5614168 Ssed_1228 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472967.1 1463240 R 425104 CDS YP_001472968.1 157374368 5614169 complement(1463777..1464064) 1 NC_009831.1 KEGG: shw:Sputw3181_1321 protein of unknown function DUF167; hypothetical protein 1464064 5614169 Ssed_1229 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472968.1 1463777 R 425104 CDS YP_001472969.1 157374369 5614170 complement(1464064..1464612) 1 NC_009831.1 KEGG: slo:Shew_1135 protein of unknown function YGGT; hypothetical protein 1464612 5614170 Ssed_1230 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472969.1 1464064 R 425104 CDS YP_001472970.1 157374370 5614158 complement(1464657..1465475) 1 NC_009831.1 KEGG: slo:Shew_1136 pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1465475 5614158 Ssed_1231 Shewanella sediminis HAW-EB3 pyrroline-5-carboxylate reductase YP_001472970.1 1464657 R 425104 CDS YP_001472971.1 157374371 5614159 complement(1465609..1466313) 1 NC_009831.1 KEGG: slo:Shew_1137 alanine racemase domain protein; alanine racemase 1466313 5614159 Ssed_1232 Shewanella sediminis HAW-EB3 alanine racemase YP_001472971.1 1465609 R 425104 CDS YP_001472972.1 157374372 5614160 1466350..1467384 1 NC_009831.1 KEGG: son:SO3351 twitching motility protein PilT; twitching motility protein PilT 1467384 5614160 Ssed_1233 Shewanella sediminis HAW-EB3 twitching motility protein PilT YP_001472972.1 1466350 D 425104 CDS YP_001472973.1 157374373 5614161 1467411..1468523 1 NC_009831.1 KEGG: shn:Shewana3_1196 twitching motility protein; twitching motility protein 1468523 5614161 Ssed_1234 Shewanella sediminis HAW-EB3 twitching motility protein YP_001472973.1 1467411 D 425104 CDS YP_001472974.1 157374374 5610431 1468858..1469895 1 NC_009831.1 KEGG: spc:Sputcn32_2683 ferrochelatase; ferrochelatase 1469895 5610431 Ssed_1235 Shewanella sediminis HAW-EB3 ferrochelatase YP_001472974.1 1468858 D 425104 CDS YP_001472975.1 157374375 5610432 complement(1469964..1470383) 1 NC_009831.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1470383 5610432 Ssed_1236 Shewanella sediminis HAW-EB3 Holliday junction resolvase-like protein YP_001472975.1 1469964 R 425104 CDS YP_001472976.1 157374376 5610433 complement(1470468..1471028) 1 NC_009831.1 KEGG: slo:Shew_1144 protein of unknown function DUF179; hypothetical protein 1471028 5610433 Ssed_1237 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472976.1 1470468 R 425104 CDS YP_001472977.1 157374377 5610434 complement(1471075..1471404) 1 NC_009831.1 involved in start site selection during the initiation of translation; translation initiation factor Sui1 1471404 5610434 Ssed_1238 Shewanella sediminis HAW-EB3 translation initiation factor Sui1 YP_001472977.1 1471075 R 425104 CDS YP_001472978.1 157374378 5611508 complement(1471938..1472255) 1 NC_009831.1 KEGG: spc:Sputcn32_2679 hypothetical protein; hypothetical protein 1472255 5611508 Ssed_1239 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472978.1 1471938 R 425104 CDS YP_001472979.1 157374379 5611509 1472427..1472987 1 NC_009831.1 KEGG: slo:Shew_1147 hypothetical protein; hypothetical protein 1472987 5611509 Ssed_1240 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472979.1 1472427 D 425104 CDS YP_001472980.1 157374380 5611510 1473325..1473828 1 NC_009831.1 KEGG: slo:Shew_1148 hypothetical protein; hypothetical protein 1473828 5611510 Ssed_1241 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472980.1 1473325 D 425104 CDS YP_001472981.1 157374381 5611567 complement(1473960..1474838) 1 NC_009831.1 KEGG: slo:Shew_1149 transcriptional regulator, LysR family; LysR family transcriptional regulator 1474838 5611567 Ssed_1242 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001472981.1 1473960 R 425104 CDS YP_001472982.1 157374382 5611568 1474923..1475333 1 NC_009831.1 KEGG: vpa:VP1155 hypothetical protein; hypothetical protein 1475333 5611568 Ssed_1243 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472982.1 1474923 D 425104 CDS YP_001472983.1 157374383 5611569 1475606..1476175 1 NC_009831.1 KEGG: sbl:Sbal_3012 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 1476175 5611569 Ssed_1244 Shewanella sediminis HAW-EB3 OmpA/MotB domain-containing protein YP_001472983.1 1475606 D 425104 CDS YP_001472984.1 157374384 5611570 1476331..1477155 1 NC_009831.1 KEGG: slo:Shew_1152 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 1477155 5611570 Ssed_1245 Shewanella sediminis HAW-EB3 mechanosensitive ion channel protein MscS YP_001472984.1 1476331 D 425104 CDS YP_001472985.1 157374385 5609786 complement(1477258..1477905) 1 NC_009831.1 KEGG: slo:Shew_1154 protein of unknown function UPF0126; hypothetical protein 1477905 5609786 Ssed_1246 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472985.1 1477258 R 425104 CDS YP_001472986.1 157374386 5609787 1478254..1479264 1 NC_009831.1 KEGG: slo:Shew_1155 threonine aldolase; threonine aldolase 1479264 5609787 Ssed_1247 Shewanella sediminis HAW-EB3 threonine aldolase YP_001472986.1 1478254 D 425104 CDS YP_001472987.1 157374387 5609788 complement(1479386..1480162) 1 NC_009831.1 KEGG: sbl:Sbal_3690 hypothetical protein; hypothetical protein 1480162 5609788 Ssed_1248 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472987.1 1479386 R 425104 CDS YP_001472988.1 157374388 5609789 complement(1480291..1481922) 1 NC_009831.1 KEGG: slo:Shew_1157 alkaline phosphatase; alkaline phosphatase 1481922 5609789 Ssed_1249 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001472988.1 1480291 R 425104 CDS YP_001472989.1 157374389 5610484 complement(1481940..1483430) 1 NC_009831.1 KEGG: slo:Shew_1158 alkaline phosphatase; alkaline phosphatase 1483430 5610484 Ssed_1250 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001472989.1 1481940 R 425104 CDS YP_001472990.1 157374390 5610485 1483782..1484150 1 NC_009831.1 KEGG: slo:Shew_1159 thioesterase superfamily protein; thioesterase superfamily protein 1484150 5610485 Ssed_1251 Shewanella sediminis HAW-EB3 thioesterase superfamily protein YP_001472990.1 1483782 D 425104 CDS YP_001472991.1 157374391 5610486 complement(1484207..1484422) 1 NC_009831.1 KEGG: slo:Shew_1160 hypothetical protein; hypothetical protein 1484422 5610486 Ssed_1252 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472991.1 1484207 R 425104 CDS YP_001472992.1 157374392 5614100 complement(1484582..1485883) 1 NC_009831.1 KEGG: slo:Shew_1161 NADH dehydrogenase; NADH dehydrogenase 1485883 5614100 Ssed_1253 Shewanella sediminis HAW-EB3 NADH dehydrogenase YP_001472992.1 1484582 R 425104 CDS YP_001472993.1 157374393 5614101 complement(1486295..1486657) 1 NC_009831.1 KEGG: slo:Shew_1162 hypothetical protein; hypothetical protein 1486657 5614101 Ssed_1254 Shewanella sediminis HAW-EB3 hypothetical protein YP_001472993.1 1486295 R 425104 CDS YP_001472994.1 157374394 5614102 1487281..1488456 1 NC_009831.1 KEGG: slo:Shew_1163 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1488456 5614102 Ssed_1255 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001472994.1 1487281 D 425104 CDS YP_001472995.1 157374395 5614103 1488469..1491585 1 NC_009831.1 KEGG: slo:Shew_1164 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1491585 5614103 Ssed_1256 Shewanella sediminis HAW-EB3 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001472995.1 1488469 D 425104 CDS YP_001472996.1 157374396 5613898 1491913..1492125 1 NC_009831.1 KEGG: ppr:PBPRB0036 Cold shock-like protein; cold shock-like protein 1492125 5613898 Ssed_1257 Shewanella sediminis HAW-EB3 cold shock-like protein YP_001472996.1 1491913 D 425104 CDS YP_001472997.1 157374397 5613899 complement(1493116..1494264) 1 NC_009831.1 KEGG: slo:Shew_1166 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1494264 5613899 Ssed_1258 Shewanella sediminis HAW-EB3 iron-containing alcohol dehydrogenase YP_001472997.1 1493116 R 425104 CDS YP_001472998.1 157374398 5613900 1494644..1495804 1 NC_009831.1 KEGG: slo:Shew_0238 porin, gram-negative type; porin 1495804 5613900 Ssed_1259 Shewanella sediminis HAW-EB3 porin YP_001472998.1 1494644 D 425104 CDS YP_001472999.1 157374399 5613901 complement(1496104..1496583) 1 NC_009831.1 KEGG: slo:Shew_0707 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 1496583 5613901 Ssed_1260 Shewanella sediminis HAW-EB3 prolyl-tRNA synthetase YP_001472999.1 1496104 R 425104 CDS YP_001473000.1 157374400 5614229 complement(1496732..1497211) 1 NC_009831.1 KEGG: sbl:Sbal_3176 protein of unknown function DUF88; hypothetical protein 1497211 5614229 Ssed_1261 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473000.1 1496732 R 425104 CDS YP_001473001.1 157374401 5614230 1497399..1499039 1 NC_009831.1 KEGG: slo:Shew_1174 sulfotransferase; sulfotransferase 1499039 5614230 Ssed_1262 Shewanella sediminis HAW-EB3 sulfotransferase YP_001473001.1 1497399 D 425104 CDS YP_001473002.1 157374402 5614231 complement(1499112..1500230) 1 NC_009831.1 KEGG: slo:Shew_1175 sec-C motif domain protein; SecC motif-containing protein 1500230 5614231 Ssed_1263 Shewanella sediminis HAW-EB3 SecC motif-containing protein YP_001473002.1 1499112 R 425104 CDS YP_001473003.1 157374403 5612461 complement(1500326..1501336) 1 NC_009831.1 KEGG: slo:Shew_1176 sec-C motif domain protein; SecC motif-containing protein 1501336 5612461 Ssed_1264 Shewanella sediminis HAW-EB3 SecC motif-containing protein YP_001473003.1 1500326 R 425104 CDS YP_001473004.1 157374404 5612462 complement(1501531..1501965) 1 NC_009831.1 KEGG: sfr:Sfri_0645 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1501965 5612462 Ssed_1265 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001473004.1 1501531 R 425104 CDS YP_001473005.1 157374405 5612463 1502284..1503399 1 NC_009831.1 KEGG: shw:Sputw3181_1226 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1503399 5612463 Ssed_1266 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001473005.1 1502284 D 425104 CDS YP_001473006.1 157374406 5612464 1503399..1506506 1 NC_009831.1 KEGG: spc:Sputcn32_2787 acriflavin resistance protein; acriflavin resistance protein 1506506 5612464 Ssed_1267 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001473006.1 1503399 D 425104 CDS YP_001473007.1 157374407 5614041 1506638..1507108 1 NC_009831.1 KEGG: pat:Patl_1730 protein of unknown function DUF419; hypothetical protein 1507108 5614041 Ssed_1268 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473007.1 1506638 D 425104 CDS YP_001473008.1 157374408 5614042 complement(1507120..1508217) 1 NC_009831.1 KEGG: slo:Shew_1182 metallophosphoesterase; metallophosphoesterase 1508217 5614042 Ssed_1269 Shewanella sediminis HAW-EB3 metallophosphoesterase YP_001473008.1 1507120 R 425104 CDS YP_001473009.1 157374409 5614043 complement(1508521..1510188) 1 NC_009831.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 1510188 5614043 Ssed_1270 Shewanella sediminis HAW-EB3 ABC transporter ATP-binding protein YP_001473009.1 1508521 R 425104 CDS YP_001473010.1 157374410 5614044 1510701..1511957 1 NC_009831.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1511957 glyA 5614044 glyA Shewanella sediminis HAW-EB3 serine hydroxymethyltransferase YP_001473010.1 1510701 D 425104 CDS YP_001473011.1 157374411 5611090 1512113..1512562 1 NC_009831.1 KEGG: sfr:Sfri_1034 ribonucleotide reductase regulator NrdR-like protein; transcriptional regulator NrdR 1512562 nrdR 5611090 nrdR Shewanella sediminis HAW-EB3 transcriptional regulator NrdR YP_001473011.1 1512113 D 425104 CDS YP_001473012.1 157374412 5611091 1512628..1513752 1 NC_009831.1 KEGG: spc:Sputcn32_2778 riboflavin biosynthesis protein RibD; diaminohydroxyphosphoribosylaminopyrimidine deaminase 1513752 5611091 Ssed_1273 Shewanella sediminis HAW-EB3 diaminohydroxyphosphoribosylaminopyrimidine deaminase YP_001473012.1 1512628 D 425104 CDS YP_001473013.1 157374413 5611092 1513757..1514419 1 NC_009831.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1514419 5611092 Ssed_1274 Shewanella sediminis HAW-EB3 riboflavin synthase subunit alpha YP_001473013.1 1513757 D 425104 CDS YP_001473014.1 157374414 5611099 1514529..1515632 1 NC_009831.1 KEGG: slo:Shew_1189 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1515632 5611099 Ssed_1275 Shewanella sediminis HAW-EB3 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001473014.1 1514529 D 425104 CDS YP_001473015.1 157374415 5611100 1515812..1516294 1 NC_009831.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1516294 ribH 5611100 ribH Shewanella sediminis HAW-EB3 6,7-dimethyl-8-ribityllumazine synthase YP_001473015.1 1515812 D 425104 CDS YP_001473016.1 157374416 5611101 1516303..1516707 1 NC_009831.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1516707 nusB 5611101 nusB Shewanella sediminis HAW-EB3 transcription antitermination protein NusB YP_001473016.1 1516303 D 425104 CDS YP_001473017.1 157374417 5611102 1516823..1517782 1 NC_009831.1 KEGG: shn:Shewana3_1101 thiamine-monophosphate kinase; thiamine-phosphate kinase 1517782 5611102 Ssed_1278 Shewanella sediminis HAW-EB3 thiamine-phosphate kinase YP_001473017.1 1516823 D 425104 CDS YP_001473018.1 157374418 5613731 1517782..1518276 1 NC_009831.1 KEGG: sbl:Sbal_3154 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase 1518276 5613731 Ssed_1279 Shewanella sediminis HAW-EB3 phosphatidylglycerophosphatase YP_001473018.1 1517782 D 425104 CDS YP_001473019.1 157374419 5613732 1518661..1519869 1 NC_009831.1 KEGG: gvi:glr1180 hypothetical protein; ubiquinone/menaquinone biosynthesis methyltransferase 1519869 5613732 Ssed_1280 Shewanella sediminis HAW-EB3 ubiquinone/menaquinone biosynthesis methyltransferase YP_001473019.1 1518661 D 425104 CDS YP_001473020.1 157374420 5613733 complement(1519990..1521651) 1 NC_009831.1 KEGG: slo:Shew_1196 DNA repair protein RecN; recombination and repair protein 1521651 5613733 Ssed_1281 Shewanella sediminis HAW-EB3 recombination and repair protein YP_001473020.1 1519990 R 425104 CDS YP_001473021.1 157374421 5613734 complement(1521747..1522715) 1 NC_009831.1 KEGG: sbl:Sbal_3152 auxin efflux carrier; auxin efflux carrier 1522715 5613734 Ssed_1282 Shewanella sediminis HAW-EB3 auxin efflux carrier YP_001473021.1 1521747 R 425104 CDS YP_001473022.1 157374422 5611110 complement(1522858..1523109) 1 NC_009831.1 KEGG: she:Shewmr4_1107 hypothetical protein; hypothetical protein 1523109 5611110 Ssed_1283 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473022.1 1522858 R 425104 CDS YP_001473023.1 157374423 5611111 complement(1523399..1524004) 1 NC_009831.1 KEGG: slo:Shew_1199 protein of unknown function DUF416; hypothetical protein 1524004 5611111 Ssed_1284 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473023.1 1523399 R 425104 CDS YP_001473024.1 157374424 5611112 complement(1523979..1526792) 1 NC_009831.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 1526792 5611112 Ssed_1285 Shewanella sediminis HAW-EB3 hybrid sensory histidine kinase BarA YP_001473024.1 1523979 R 425104 CDS YP_001473025.1 157374425 5611140 1526890..1528218 1 NC_009831.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1528218 rumA 5611140 rumA Shewanella sediminis HAW-EB3 23S rRNA 5-methyluridine methyltransferase YP_001473025.1 1526890 D 425104 CDS YP_001473026.1 157374426 5611141 1528439..1530646 1 NC_009831.1 KEGG: slo:Shew_1202 (p)ppGpp synthetase I, SpoT/RelA; GTP diphosphokinase 1530646 5611141 Ssed_1287 Shewanella sediminis HAW-EB3 GTP diphosphokinase YP_001473026.1 1528439 D 425104 CDS YP_001473027.1 157374427 5611142 1530746..1531537 1 NC_009831.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 1531537 mazG 5611142 mazG Shewanella sediminis HAW-EB3 nucleoside triphosphate pyrophosphohydrolase YP_001473027.1 1530746 D 425104 CDS YP_001473028.1 157374428 5611143 1531660..1533297 1 NC_009831.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1533297 pyrG 5611143 pyrG Shewanella sediminis HAW-EB3 CTP synthetase YP_001473028.1 1531660 D 425104 CDS YP_001473029.1 157374429 5611175 1533416..1534711 1 NC_009831.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1534711 eno 5611175 eno Shewanella sediminis HAW-EB3 phosphopyruvate hydratase YP_001473029.1 1533416 D 425104 CDS YP_001473030.1 157374430 5611176 1534919..1535218 1 NC_009831.1 KEGG: slo:Shew_1206 septum formation initiator; septum formation initiator 1535218 5611176 Ssed_1291 Shewanella sediminis HAW-EB3 septum formation initiator YP_001473030.1 1534919 D 425104 CDS YP_001473031.1 157374431 5611177 1535266..1535970 1 NC_009831.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1535970 ispD 5611177 ispD Shewanella sediminis HAW-EB3 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001473031.1 1535266 D 425104 CDS YP_001473032.1 157374432 5611178 1536056..1536541 1 NC_009831.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1536541 ispF 5611178 ispF Shewanella sediminis HAW-EB3 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_001473032.1 1536056 D 425104 CDS YP_001473033.1 157374433 5613563 1536606..1537676 1 NC_009831.1 KEGG: slo:Shew_1209 pseudouridylate synthase; pseudouridylate synthase 1537676 5613563 Ssed_1294 Shewanella sediminis HAW-EB3 pseudouridylate synthase YP_001473033.1 1536606 D 425104 CDS YP_001473034.1 157374434 5613564 1537737..1538486 1 NC_009831.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1538486 surE 5613564 surE Shewanella sediminis HAW-EB3 stationary phase survival protein SurE YP_001473034.1 1537737 D 425104 CDS YP_001473035.1 157374435 5613565 1538483..1539118 1 NC_009831.1 KEGG: slo:Shew_1211 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1539118 5613565 Ssed_1296 Shewanella sediminis HAW-EB3 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001473035.1 1538483 D 425104 CDS YP_001473036.1 157374436 5611193 1539159..1540073 1 NC_009831.1 KEGG: slo:Shew_1212 peptidase M23B; peptidase M23B 1540073 5611193 Ssed_1297 Shewanella sediminis HAW-EB3 peptidase M23B YP_001473036.1 1539159 D 425104 CDS YP_001473037.1 157374437 5611194 1540150..1541121 1 NC_009831.1 KEGG: slo:Shew_1213 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 1541121 5611194 Ssed_1298 Shewanella sediminis HAW-EB3 RpoD family RNA polymerase sigma factor YP_001473037.1 1540150 D 425104 CDS YP_001473038.1 157374438 5611195 complement(1541354..1543933) 1 NC_009831.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1543933 5611195 Ssed_1299 Shewanella sediminis HAW-EB3 DNA mismatch repair protein MutS YP_001473038.1 1541354 R 425104 CDS YP_001473039.1 157374439 5611196 1544274..1545335 1 NC_009831.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1545335 recA 5611196 recA Shewanella sediminis HAW-EB3 recombinase A YP_001473039.1 1544274 D 425104 CDS YP_001473040.1 157374440 5614123 complement(1545549..1546142) 1 NC_009831.1 KEGG: she:Shewmr4_1779 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 1546142 5614123 Ssed_1301 Shewanella sediminis HAW-EB3 transposase IS116/IS110/IS902 family protein YP_001473040.1 1545549 R 425104 CDS YP_001473041.1 157374441 5614124 complement(1546512..1546964) 1 NC_009831.1 KEGG: sfr:Sfri_3681 hypothetical protein; hypothetical protein 1546964 5614124 Ssed_1302 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473041.1 1546512 R 425104 CDS YP_001473042.1 157374442 5614125 complement(1547418..1547723) 1 NC_009831.1 KEGG: sil:SPO3588 hypothetical protein; hypothetical protein 1547723 5614125 Ssed_1303 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473042.1 1547418 R 425104 CDS YP_001473043.1 157374443 5614126 complement(1547738..1548124) 1 NC_009831.1 KEGG: sbl:Sbal_0203 NIPSNAP family containing protein; NIPSNAP family protein 1548124 5614126 Ssed_1304 Shewanella sediminis HAW-EB3 NIPSNAP family protein YP_001473043.1 1547738 R 425104 CDS YP_001473044.1 157374444 5611313 1548674..1549606 1 NC_009831.1 KEGG: shm:Shewmr7_2579 cytochrome c family protein; cytochrome c family protein 1549606 5611313 Ssed_1305 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001473044.1 1548674 D 425104 CDS YP_001473045.1 157374445 5611314 1549618..1551636 1 NC_009831.1 KEGG: sfr:Sfri_3685 outer membrane protein; outer membrane protein 1551636 5611314 Ssed_1306 Shewanella sediminis HAW-EB3 outer membrane protein YP_001473045.1 1549618 D 425104 CDS YP_001473046.1 157374446 5611315 1551660..1554149 1 NC_009831.1 KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; anaerobic dimethyl sulfoxide reductase subunit A 1554149 5611315 Ssed_1307 Shewanella sediminis HAW-EB3 anaerobic dimethyl sulfoxide reductase subunit A YP_001473046.1 1551660 D 425104 CDS YP_001473047.1 157374447 5611316 1554164..1554799 1 NC_009831.1 KEGG: sfr:Sfri_3127 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1554799 5611316 Ssed_1308 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001473047.1 1554164 D 425104 CDS YP_001473048.1 157374448 5611340 1554850..1555464 1 NC_009831.1 KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 1555464 5611340 Ssed_1309 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001473048.1 1554850 D 425104 CDS YP_001473049.1 157374449 5611341 1555464..1556195 1 NC_009831.1 KEGG: mmp:MMP0586 uncharacterized endonuclease III related protein; endonuclease III-like protein 1556195 5611341 Ssed_1310 Shewanella sediminis HAW-EB3 endonuclease III-like protein YP_001473049.1 1555464 D 425104 CDS YP_001473050.1 157374450 5611342 complement(1556294..1557100) 1 NC_009831.1 KEGG: ppr:PBPRA0141 transcriptional regulator, LysR family; transcriptional regulator-like protein 1557100 5611342 Ssed_1311 Shewanella sediminis HAW-EB3 transcriptional regulator-like protein YP_001473050.1 1556294 R 425104 CDS YP_001473051.1 157374451 5611301 complement(1557110..1557952) 1 NC_009831.1 KEGG: shn:Shewana3_3686 transcriptional regulator, LysR family; LysR family transcriptional regulator 1557952 5611301 Ssed_1312 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473051.1 1557110 R 425104 CDS YP_001473052.1 157374452 5611302 complement(1558317..1559180) 1 NC_009831.1 KEGG: aor:AO090010000317 predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 Pfam: A1pp PROSITE: SIRTUIN; phosphatase 1559180 5611302 Ssed_1313 Shewanella sediminis HAW-EB3 phosphatase YP_001473052.1 1558317 R 425104 CDS YP_001473053.1 157374453 5611303 complement(1559167..1560048) 1 NC_009831.1 KEGG: cdf:CD0865 hypothetical protein; hypothetical protein 1560048 5611303 Ssed_1314 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473053.1 1559167 R 425104 CDS YP_001473054.1 157374454 5611304 complement(1560187..1560951) 1 NC_009831.1 KEGG: sil:SPOA0106 hypothetical protein; hypothetical protein 1560951 5611304 Ssed_1315 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473054.1 1560187 R 425104 CDS YP_001473055.1 157374455 5613883 complement(1562334..1563545) 1 NC_009831.1 KEGG: hch:HCH_04222 permease of the major facilitator superfamily; major facilitator superfamily permease 1563545 5613883 Ssed_1316 Shewanella sediminis HAW-EB3 major facilitator superfamily permease YP_001473055.1 1562334 R 425104 CDS YP_001473056.1 157374456 5613884 1563679..1564584 1 NC_009831.1 KEGG: aha:AHA_1950 transcriptional regulator, LysR family; LysR family transcriptional regulator 1564584 5613884 Ssed_1317 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473056.1 1563679 D 425104 CDS YP_001473057.1 157374457 5613885 1565532..1568156 1 NC_009831.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1568156 alaS 5613885 alaS Shewanella sediminis HAW-EB3 alanyl-tRNA synthetase YP_001473057.1 1565532 D 425104 CDS YP_001473058.1 157374458 5613886 1568610..1568807 1 NC_009831.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1568807 5613886 Ssed_1319 Shewanella sediminis HAW-EB3 carbon storage regulator YP_001473058.1 1568610 D 425104 CDS YP_001473059.1 157374459 5610351 1571449..1571745 1 NC_009831.1 KEGG: slo:Shew_1219 sodium pump decarboxylases, gamma subunit; sodium pump decarboxylase, gamma subunit 1571745 5610351 Ssed_1320 Shewanella sediminis HAW-EB3 sodium pump decarboxylase, gamma subunit YP_001473059.1 1571449 D 425104 CDS YP_001473060.1 157374460 5610094 1571771..1573585 1 NC_009831.1 catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 1573585 5610094 Ssed_1321 Shewanella sediminis HAW-EB3 oxaloacetate decarboxylase YP_001473060.1 1571771 D 425104 CDS YP_001473061.1 157374461 5610095 1573594..1574724 1 NC_009831.1 KEGG: slo:Shew_1221 sodium ion-translocating decarboxylase, beta subunit; glutaconyl-CoA decarboxylase 1574724 5610095 Ssed_1322 Shewanella sediminis HAW-EB3 glutaconyl-CoA decarboxylase YP_001473061.1 1573594 D 425104 CDS YP_001473062.1 157374462 5611023 1575172..1575357 1 NC_009831.1 KEGG: slo:Shew_1222 hypothetical protein; hypothetical protein 1575357 5611023 Ssed_1323 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473062.1 1575172 D 425104 CDS YP_001473063.1 157374463 5611024 complement(1575419..1575754) 1 NC_009831.1 KEGG: shw:Sputw3181_1017 sec-C motif domain protein; SecC motif-containing protein 1575754 5611024 Ssed_1324 Shewanella sediminis HAW-EB3 SecC motif-containing protein YP_001473063.1 1575419 R 425104 CDS YP_001473064.1 157374464 5611025 complement(1575906..1576091) 1 NC_009831.1 KEGG: slo:Shew_1223 hypothetical protein; hypothetical protein 1576091 5611025 Ssed_1325 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473064.1 1575906 R 425104 CDS YP_001473065.1 157374465 5611026 complement(1576280..1577563) 1 NC_009831.1 KEGG: slo:Shew_1224 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1577563 5611026 Ssed_1326 Shewanella sediminis HAW-EB3 sodium:dicarboxylate symporter YP_001473065.1 1576280 R 425104 CDS YP_001473066.1 157374466 5610570 1577852..1578274 1 NC_009831.1 KEGG: slo:Shew_1225 hypothetical protein; hypothetical protein 1578274 5610570 Ssed_1327 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473066.1 1577852 D 425104 CDS YP_001473067.1 157374467 5610571 1578295..1581129 1 NC_009831.1 KEGG: slo:Shew_1226 peptidase M16 domain protein; peptidase M16 domain-containing protein 1581129 5610571 Ssed_1328 Shewanella sediminis HAW-EB3 peptidase M16 domain-containing protein YP_001473067.1 1578295 D 425104 CDS YP_001473068.1 157374468 5610572 1581345..1582979 1 NC_009831.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 1582979 5610572 Ssed_1329 Shewanella sediminis HAW-EB3 glutamate--cysteine ligase YP_001473068.1 1581345 D 425104 CDS YP_001473069.1 157374469 5610573 1582976..1583416 1 NC_009831.1 KEGG: shm:Shewmr7_3061 hypothetical protein; hypothetical protein 1583416 5610573 Ssed_1330 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473069.1 1582976 D 425104 CDS YP_001473070.1 157374470 5610606 1583676..1584293 1 NC_009831.1 KEGG: slo:Shew_1229 hypothetical protein; hypothetical protein 1584293 5610606 Ssed_1331 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473070.1 1583676 D 425104 CDS YP_001473071.1 157374471 5610607 complement(1584409..1585647) 1 NC_009831.1 KEGG: sdn:Sden_1222 GGDEF domain; diguanylate cyclase 1585647 5610607 Ssed_1332 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473071.1 1584409 R 425104 CDS YP_001473072.1 157374472 5610608 1586138..1586647 1 NC_009831.1 KEGG: slo:Shew_1230 phosphoribosylaminoimidazole carboxylase, catalytic subunit; phosphoribosylaminoimidazole carboxylase 1586647 5610608 Ssed_1333 Shewanella sediminis HAW-EB3 phosphoribosylaminoimidazole carboxylase YP_001473072.1 1586138 D 425104 CDS YP_001473073.1 157374473 5610319 complement(1586714..1588438) 1 NC_009831.1 role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM 1588438 5610319 Ssed_1334 Shewanella sediminis HAW-EB3 sulfate transporter YchM YP_001473073.1 1586714 R 425104 CDS YP_001473074.1 157374474 5610320 1588923..1589537 1 NC_009831.1 KEGG: slo:Shew_1231 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 1589537 5610320 Ssed_1335 Shewanella sediminis HAW-EB3 ECF subfamily RNA polymerase sigma-24 factor YP_001473074.1 1588923 D 425104 CDS YP_001473075.1 157374475 5610321 1589527..1590249 1 NC_009831.1 KEGG: slo:Shew_1232 hypothetical protein; hypothetical protein 1590249 5610321 Ssed_1336 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473075.1 1589527 D 425104 CDS YP_001473076.1 157374476 5610322 complement(1590298..1590996) 1 NC_009831.1 KEGG: cph:Cpha266_1009 hypothetical protein; hypothetical protein 1590996 5610322 Ssed_1337 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473076.1 1590298 R 425104 CDS YP_001473077.1 157374477 5610927 complement(1591027..1591503) 1 NC_009831.1 KEGG: sbl:Sbal_2319 hypothetical protein; hypothetical protein 1591503 5610927 Ssed_1338 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473077.1 1591027 R 425104 CDS YP_001473078.1 157374478 5610928 1591692..1594976 1 NC_009831.1 KEGG: shw:Sputw3181_1281 peptidase S41; peptidase S41 1594976 5610928 Ssed_1339 Shewanella sediminis HAW-EB3 peptidase S41 YP_001473078.1 1591692 D 425104 CDS YP_001473079.1 157374479 5610929 1595219..1596106 1 NC_009831.1 KEGG: slo:Shew_1235 hypothetical protein; hypothetical protein 1596106 5610929 Ssed_1340 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473079.1 1595219 D 425104 CDS YP_001473080.1 157374480 5610930 1596266..1596835 1 NC_009831.1 KEGG: slo:Shew_2686 lipoprotein; lipoprotein 1596835 5610930 Ssed_1341 Shewanella sediminis HAW-EB3 lipoprotein YP_001473080.1 1596266 D 425104 CDS YP_001473081.1 157374481 5613788 complement(1597648..1598136) 1 NC_009831.1 KEGG: shm:Shewmr7_1215 hypothetical protein; hypothetical protein 1598136 5613788 Ssed_1342 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473081.1 1597648 R 425104 CDS YP_001473082.1 157374482 5613789 complement(1598277..1598618) 1 NC_009831.1 KEGG: shn:Shewana3_1147 hypothetical protein; hypothetical protein 1598618 5613789 Ssed_1343 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473082.1 1598277 R 425104 CDS YP_001473083.1 157374483 5613790 complement(1598623..1600293) 1 NC_009831.1 KEGG: spc:Sputcn32_2728 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 1600293 5613790 Ssed_1344 Shewanella sediminis HAW-EB3 PepSY-associated TM helix domain-containing protein YP_001473083.1 1598623 R 425104 CDS YP_001473084.1 157374484 5611726 complement(1600297..1600596) 1 NC_009831.1 KEGG: sdn:Sden_2355 hypothetical protein; hypothetical protein 1600596 5611726 Ssed_1345 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473084.1 1600297 R 425104 CDS YP_001473085.1 157374485 5611727 1601225..1601581 1 NC_009831.1 KEGG: slo:Shew_1241 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 1601581 5611727 Ssed_1346 Shewanella sediminis HAW-EB3 sigma 54 modulation protein/ribosomal protein S30EA YP_001473085.1 1601225 D 425104 CDS YP_001473086.1 157374486 5611728 complement(1601711..1603633) 1 NC_009831.1 KEGG: vfi:VFA0260 glutathione-regulated potassium-efflux system protein KefC; glutathione-regulated potassium-efflux system protein KefC 1603633 5611728 Ssed_1347 Shewanella sediminis HAW-EB3 glutathione-regulated potassium-efflux system protein KefC YP_001473086.1 1601711 R 425104 CDS YP_001473087.1 157374487 5611729 complement(1603661..1604278) 1 NC_009831.1 KEGG: ppr:PBPRB0548 NAD(P)H oxidoreductase; NAD(P)H oxidoreductase 1604278 5611729 Ssed_1348 Shewanella sediminis HAW-EB3 NAD(P)H oxidoreductase YP_001473087.1 1603661 R 425104 CDS YP_001473088.1 157374488 5611392 1604797..1605375 1 NC_009831.1 KEGG: shw:Sputw3181_2794 PhnA protein; PhnA protein 1605375 5611392 Ssed_1349 Shewanella sediminis HAW-EB3 PhnA protein YP_001473088.1 1604797 D 425104 CDS YP_001473089.1 157374489 5611393 1605517..1605969 1 NC_009831.1 KEGG: slo:Shew_2726 protein of unknown function DUF188; hypothetical protein 1605969 5611393 Ssed_1350 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473089.1 1605517 D 425104 CDS YP_001473090.1 157374490 5611394 1606364..1607488 1 NC_009831.1 KEGG: slo:Shew_2725 PfkB domain protein; ribokinase-like domain-containing protein 1607488 5611394 Ssed_1351 Shewanella sediminis HAW-EB3 ribokinase-like domain-containing protein YP_001473090.1 1606364 D 425104 CDS YP_001473091.1 157374491 5611395 1607482..1608396 1 NC_009831.1 KEGG: slo:Shew_2724 indigoidine synthase A family protein; indigoidine synthase A family protein 1608396 5611395 Ssed_1352 Shewanella sediminis HAW-EB3 indigoidine synthase A family protein YP_001473091.1 1607482 D 425104 CDS YP_001473092.1 157374492 5611733 1608663..1609946 1 NC_009831.1 KEGG: sde:Sde_3835 excitatory amino acid transporter; excitatory amino acid transporter 1609946 5611733 Ssed_1353 Shewanella sediminis HAW-EB3 excitatory amino acid transporter YP_001473092.1 1608663 D 425104 CDS YP_001473093.1 157374493 5611734 complement(1609996..1611102) 1 NC_009831.1 KEGG: vvu:VV1_2369 GGDEF family protein; diguanylate cyclase 1611102 5611734 Ssed_1354 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473093.1 1609996 R 425104 CDS YP_001473094.1 157374494 5611735 1611453..1612682 1 NC_009831.1 KEGG: psa:PST_0687 sodium-glutamate symporter; sodium-glutamate symporter 1612682 5611735 Ssed_1355 Shewanella sediminis HAW-EB3 sodium-glutamate symporter YP_001473094.1 1611453 D 425104 CDS YP_001473095.1 157374495 5611736 complement(1612796..1613317) 1 NC_009831.1 KEGG: ppr:PBPRB0617 MutT/NUDIX family protein; MutT/NUDIX family protein 1613317 5611736 Ssed_1356 Shewanella sediminis HAW-EB3 MutT/NUDIX family protein YP_001473095.1 1612796 R 425104 CDS YP_001473096.1 157374496 5613098 complement(1613501..1614220) 1 NC_009831.1 KEGG: sbl:Sbal_2328 hypothetical protein; hypothetical protein 1614220 5613098 Ssed_1357 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473096.1 1613501 R 425104 CDS YP_001473097.1 157374497 5613099 complement(1614497..1614823) 1 NC_009831.1 hypothetical protein 1614823 5613099 Ssed_1358 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473097.1 1614497 R 425104 CDS YP_001473098.1 157374498 5613100 complement(1615041..1615280) 1 NC_009831.1 KEGG: slo:Shew_2721 hypothetical protein; hypothetical protein 1615280 5613100 Ssed_1359 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473098.1 1615041 R 425104 CDS YP_001473099.1 157374499 5610796 1615537..1616283 1 NC_009831.1 KEGG: saz:Sama_2395 hypothetical protein; hypothetical protein 1616283 5610796 Ssed_1360 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473099.1 1615537 D 425104 CDS YP_001473100.1 157374500 5610797 1616472..1616651 1 NC_009831.1 KEGG: ppr:PBPRA1009 hypothetical protein; hypothetical protein 1616651 5610797 Ssed_1361 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473100.1 1616472 D 425104 CDS YP_001473101.1 157374501 5610798 complement(1617225..1617881) 1 NC_009831.1 KEGG: maq:Maqu_1180 anti-ECFsigma factor, ChrR; anti-ECF sigma factor ChrR 1617881 5610798 Ssed_1362 Shewanella sediminis HAW-EB3 anti-ECF sigma factor ChrR YP_001473101.1 1617225 R 425104 CDS YP_001473102.1 157374502 5610799 complement(1617941..1618732) 1 NC_009831.1 KEGG: cps:CPS_0824 oxidoreductase, short-chain dehydrogenase/reductase family; short chain dehydrogenase/reductase family oxidoreductase 1618732 5610799 Ssed_1363 Shewanella sediminis HAW-EB3 short chain dehydrogenase/reductase family oxidoreductase YP_001473102.1 1617941 R 425104 CDS YP_001473103.1 157374503 5612801 1618971..1619252 1 NC_009831.1 KEGG: abo:ABO_0662 hypothetical protein; hypothetical protein 1619252 5612801 Ssed_1364 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473103.1 1618971 D 425104 CDS YP_001473104.1 157374504 5612802 1619348..1619650 1 NC_009831.1 KEGG: cps:CPS_2241 hypothetical protein; hypothetical protein 1619650 5612802 Ssed_1365 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473104.1 1619348 D 425104 CDS YP_001473105.1 157374505 5612803 1620046..1621035 1 NC_009831.1 KEGG: sbl:Sbal_0430 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 1621035 5612803 Ssed_1366 Shewanella sediminis HAW-EB3 PAS/PAC sensor-containing diguanylate cyclase YP_001473105.1 1620046 D 425104 CDS YP_001473106.1 157374506 5612804 complement(1621320..1621907) 1 NC_009831.1 KEGG: cps:CPS_3362 lipoprotein; lipoprotein 1621907 5612804 Ssed_1367 Shewanella sediminis HAW-EB3 lipoprotein YP_001473106.1 1621320 R 425104 CDS YP_001473107.1 157374507 5612137 complement(1621933..1624074) 1 NC_009831.1 KEGG: vfi:VFA0120 hypothetical cytosolic protein; hypothetical protein 1624074 5612137 Ssed_1368 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473107.1 1621933 R 425104 CDS YP_001473108.1 157374508 5612138 complement(1624379..1625023) 1 NC_009831.1 hypothetical protein 1625023 5612138 Ssed_1369 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473108.1 1624379 R 425104 CDS YP_001473109.1 157374509 5612139 1625251..1626531 1 NC_009831.1 KEGG: ppr:PBPRB1966 hypothetical protein; hypothetical protein 1626531 5612139 Ssed_1370 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473109.1 1625251 D 425104 CDS YP_001473110.1 157374510 5611400 1626985..1628103 1 NC_009831.1 KEGG: slo:Shew_0274 hypothetical protein; hypothetical protein 1628103 5611400 Ssed_1371 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473110.1 1626985 D 425104 CDS YP_001473111.1 157374511 5611401 1628584..1629648 1 NC_009831.1 KEGG: rle:RL3775 HlyD family secretion protein; membrane-fusion protein-like protein 1629648 5611401 Ssed_1372 Shewanella sediminis HAW-EB3 membrane-fusion protein-like protein YP_001473111.1 1628584 D 425104 CDS YP_001473112.1 157374512 5611402 1629652..1632789 1 NC_009831.1 KEGG: slo:Shew_3796 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1632789 5611402 Ssed_1373 Shewanella sediminis HAW-EB3 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001473112.1 1629652 D 425104 CDS YP_001473113.1 157374513 5611403 1633027..1634235 1 NC_009831.1 hypothetical protein 1634235 5611403 Ssed_1374 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473113.1 1633027 D 425104 CDS YP_001473114.1 157374514 5612696 1634524..1635318 1 NC_009831.1 KEGG: ppr:PBPRB1967 hypothetical protein; hypothetical protein 1635318 5612696 Ssed_1375 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473114.1 1634524 D 425104 CDS YP_001473115.1 157374515 5612697 1635409..1636704 1 NC_009831.1 KEGG: ppr:PBPRB1966 hypothetical protein; hypothetical protein 1636704 5612697 Ssed_1376 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473115.1 1635409 D 425104 CDS YP_001473116.1 157374516 5612698 complement(1636884..1637909) 1 NC_009831.1 KEGG: xfa:XF1743 esterase; esterase/lipase-like protein 1637909 5612698 Ssed_1377 Shewanella sediminis HAW-EB3 esterase/lipase-like protein YP_001473116.1 1636884 R 425104 CDS YP_001473117.1 157374517 5612699 1638415..1639092 1 NC_009831.1 hypothetical protein 1639092 5612699 Ssed_1378 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473117.1 1638415 D 425104 CDS YP_001473118.1 157374518 5612700 1639214..1639507 1 NC_009831.1 KEGG: sbl:Sbal_4226 protein of unknown function DUF333; hypothetical protein 1639507 5612700 Ssed_1379 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473118.1 1639214 D 425104 CDS YP_001473119.1 157374519 5612701 1639581..1640153 1 NC_009831.1 KEGG: slo:Shew_0396 methylation site containing protein; methylation site containing protein 1640153 5612701 Ssed_1380 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001473119.1 1639581 D 425104 CDS YP_001473120.1 157374520 5612702 1640500..1644906 1 NC_009831.1 KEGG: hch:HCH_00809 signal transduction histidine kinase; Signal transduction histidine kinase-like protein 1644906 5612702 Ssed_1381 Shewanella sediminis HAW-EB3 Signal transduction histidine kinase-like protein YP_001473120.1 1640500 D 425104 CDS YP_001473121.1 157374521 5612880 1644899..1645807 1 NC_009831.1 KEGG: saz:Sama_0065 response regulator receiver protein; response regulator receiver protein 1645807 5612880 Ssed_1382 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001473121.1 1644899 D 425104 CDS YP_001473122.1 157374522 5612881 1645918..1647147 1 NC_009831.1 KEGG: dar:Daro_0012 response regulator receiver; response regulator 1647147 5612881 Ssed_1383 Shewanella sediminis HAW-EB3 response regulator YP_001473122.1 1645918 D 425104 CDS YP_001473123.1 157374523 5612882 complement(1647155..1648153) 1 NC_009831.1 KEGG: cps:CPS_1463 hypothetical protein; hypothetical protein 1648153 5612882 Ssed_1384 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473123.1 1647155 R 425104 CDS YP_001473124.1 157374524 5612883 complement(1648311..1648772) 1 NC_009831.1 hypothetical protein 1648772 5612883 Ssed_1385 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473124.1 1648311 R 425104 CDS YP_001473125.1 157374525 5613156 1649064..1649486 1 NC_009831.1 KEGG: slo:Shew_1244 OsmC family protein; OsmC family protein 1649486 5613156 Ssed_1386 Shewanella sediminis HAW-EB3 OsmC family protein YP_001473125.1 1649064 D 425104 CDS YP_001473126.1 157374526 5613157 1649570..1649956 1 NC_009831.1 KEGG: cps:CPS_3329 hypothetical protein; hypothetical protein 1649956 5613157 Ssed_1387 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473126.1 1649570 D 425104 CDS YP_001473127.1 157374527 5613158 1650208..1650735 1 NC_009831.1 KEGG: shm:Shewmr7_1064 methylation site containing protein; methylation site containing protein 1650735 5613158 Ssed_1388 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001473127.1 1650208 D 425104 CDS YP_001473128.1 157374528 5613159 complement(1650888..1651445) 1 NC_009831.1 KEGG: bja:blr4047 hypothetical protein; hypothetical protein 1651445 5613159 Ssed_1389 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473128.1 1650888 R 425104 CDS YP_001473129.1 157374529 5613229 1651894..1652442 1 NC_009831.1 KEGG: sfr:Sfri_2735 cation antiporter; cation antiporter 1652442 5613229 Ssed_1390 Shewanella sediminis HAW-EB3 cation antiporter YP_001473129.1 1651894 D 425104 CDS YP_001473130.1 157374530 5613230 1652429..1653412 1 NC_009831.1 KEGG: noc:Noc_2951 universal stress protein, UspA; universal stress protein, UspA 1653412 5613230 Ssed_1391 Shewanella sediminis HAW-EB3 universal stress protein, UspA YP_001473130.1 1652429 D 425104 CDS YP_001473131.1 157374531 5613231 1653419..1653697 1 NC_009831.1 KEGG: sfr:Sfri_2736 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 1653697 5613231 Ssed_1392 Shewanella sediminis HAW-EB3 multiple resistance and pH regulation protein F YP_001473131.1 1653419 D 425104 CDS YP_001473132.1 157374532 5613704 1653684..1653983 1 NC_009831.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit G 1653983 5613704 Ssed_1393 Shewanella sediminis HAW-EB3 monovalent cation/H+ antiporter subunit G YP_001473132.1 1653684 D 425104 CDS YP_001473133.1 157374533 5613705 1653971..1654294 1 NC_009831.1 KEGG: sfr:Sfri_2738 hypothetical protein; hypothetical protein 1654294 5613705 Ssed_1394 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473133.1 1653971 D 425104 CDS YP_001473134.1 157374534 5613706 1654408..1655064 1 NC_009831.1 KEGG: sfr:Sfri_2739 hypothetical protein; hypothetical protein 1655064 5613706 Ssed_1395 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473134.1 1654408 D 425104 CDS YP_001473135.1 157374535 5613707 1655061..1655369 1 NC_009831.1 KEGG: sfr:Sfri_2740 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L 1655369 5613707 Ssed_1396 Shewanella sediminis HAW-EB3 NADH-ubiquinone oxidoreductase, chain 4L YP_001473135.1 1655061 D 425104 CDS YP_001473136.1 157374536 5613295 1655341..1656846 1 NC_009831.1 KEGG: sfr:Sfri_2741 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1656846 5613295 Ssed_1397 Shewanella sediminis HAW-EB3 NADH dehydrogenase (quinone) YP_001473136.1 1655341 D 425104 CDS YP_001473137.1 157374537 5613296 1656843..1658339 1 NC_009831.1 KEGG: sfr:Sfri_2742 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1658339 5613296 Ssed_1398 Shewanella sediminis HAW-EB3 NADH dehydrogenase (quinone) YP_001473137.1 1656843 D 425104 CDS YP_001473138.1 157374538 5613297 1658336..1659649 1 NC_009831.1 KEGG: sfr:Sfri_2743 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein; formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein 1659649 5613297 Ssed_1399 Shewanella sediminis HAW-EB3 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter MnhD subunit-like protein YP_001473138.1 1658336 D 425104 CDS YP_001473139.1 157374539 5613298 1659906..1660253 1 NC_009831.1 hypothetical protein 1660253 5613298 Ssed_1400 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473139.1 1659906 D 425104 CDS YP_001473140.1 157374540 5613865 complement(1660789..1661718) 1 NC_009831.1 KEGG: vvy:VVA1171 hypothetical protein; AraC family transcriptional regulator 1661718 5613865 Ssed_1401 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001473140.1 1660789 R 425104 CDS YP_001473141.1 157374541 5613866 1662030..1662980 1 NC_009831.1 KEGG: sfr:Sfri_3686 cytochrome c family protein; cytochrome c family protein 1662980 5613866 Ssed_1402 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001473141.1 1662030 D 425104 CDS YP_001473142.1 157374542 5613867 1662995..1665001 1 NC_009831.1 KEGG: sfr:Sfri_3685 outer membrane protein; outer membrane protein 1665001 5613867 Ssed_1403 Shewanella sediminis HAW-EB3 outer membrane protein YP_001473142.1 1662995 D 425104 CDS YP_001473143.1 157374543 5613868 1665016..1667388 1 NC_009831.1 KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; anaerobic dimethyl sulfoxide reductase subunit A 1667388 5613868 Ssed_1404 Shewanella sediminis HAW-EB3 anaerobic dimethyl sulfoxide reductase subunit A YP_001473143.1 1665016 D 425104 CDS YP_001473144.1 157374544 5612620 1667412..1668029 1 NC_009831.1 KEGG: sfr:Sfri_3127 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1668029 5612620 Ssed_1405 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001473144.1 1667412 D 425104 CDS YP_001473145.1 157374545 5612621 1668099..1668719 1 NC_009831.1 KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 1668719 5612621 Ssed_1406 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001473145.1 1668099 D 425104 CDS YP_001473146.1 157374546 5610280 complement(1669480..1669974) 1 NC_009831.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1669974 smpB 5610280 smpB Shewanella sediminis HAW-EB3 SsrA-binding protein YP_001473146.1 1669480 R 425104 CDS YP_001473147.1 157374547 5613708 1670199..1670630 1 NC_009831.1 KEGG: slo:Shew_1269 cyclase/dehydrase; cyclase/dehydrase 1670630 5613708 Ssed_1408 Shewanella sediminis HAW-EB3 cyclase/dehydrase YP_001473147.1 1670199 D 425104 CDS YP_001473148.1 157374548 5613709 1670980..1671312 1 NC_009831.1 KEGG: slo:Shew_1270 protein of unknown function UPF0125; hypothetical protein 1671312 5613709 Ssed_1409 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473148.1 1670980 D 425104 CDS YP_001473149.1 157374549 5613710 complement(1671422..1671937) 1 NC_009831.1 KEGG: slo:Shew_1271 SmpA/OmlA domain protein; SmpA/OmlA domain-containing protein 1671937 5613710 Ssed_1410 Shewanella sediminis HAW-EB3 SmpA/OmlA domain-containing protein YP_001473149.1 1671422 R 425104 CDS YP_001473150.1 157374550 5613711 1672375..1673205 1 NC_009831.1 KEGG: slo:Shew_1272 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase 1673205 5613711 Ssed_1411 Shewanella sediminis HAW-EB3 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001473150.1 1672375 D 425104 CDS YP_001473151.1 157374551 5609883 1673412..1673630 1 NC_009831.1 KEGG: slo:Shew_1273 hypothetical protein; hypothetical protein 1673630 5609883 Ssed_1412 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473151.1 1673412 D 425104 CDS YP_001473152.1 157374552 5609884 1673704..1675467 1 NC_009831.1 KEGG: slo:Shew_1274 diguanylate cyclase; diguanylate cyclase 1675467 5609884 Ssed_1413 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473152.1 1673704 D 425104 CDS YP_001473153.1 157374553 5609885 1676315..1678033 1 NC_009831.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 1678033 5609885 Ssed_1414 Shewanella sediminis HAW-EB3 malate synthase YP_001473153.1 1676315 D 425104 CDS YP_001473154.1 157374554 5609886 1678176..1679501 1 NC_009831.1 KEGG: sbl:Sbal_1317 isocitrate lyase; isocitrate lyase 1679501 5609886 Ssed_1415 Shewanella sediminis HAW-EB3 isocitrate lyase YP_001473154.1 1678176 D 425104 CDS YP_001473155.1 157374555 5609700 1679881..1681362 1 NC_009831.1 KEGG: slo:Shew_1277 signal transduction protein; signal transduction protein 1681362 5609700 Ssed_1416 Shewanella sediminis HAW-EB3 signal transduction protein YP_001473155.1 1679881 D 425104 CDS YP_001473156.1 157374556 5609701 complement(1681426..1681959) 1 NC_009831.1 KEGG: sbl:Sbal_3009 hypothetical protein; hypothetical protein 1681959 5609701 Ssed_1417 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473156.1 1681426 R 425104 CDS YP_001473157.1 157374557 5609702 complement(1682026..1682850) 1 NC_009831.1 KEGG: sbl:Sbal_3008 protein of unknown function DUF980; hypothetical protein 1682850 5609702 Ssed_1418 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473157.1 1682026 R 425104 CDS YP_001473158.1 157374558 5609655 complement(1682958..1684703) 1 NC_009831.1 KEGG: shn:Shewana3_1212 diguanylate cyclase; diguanylate cyclase 1684703 5609655 Ssed_1419 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473158.1 1682958 R 425104 CDS YP_001473159.1 157374559 5609656 complement(1684700..1686136) 1 NC_009831.1 KEGG: sbl:Sbal_3006 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1686136 5609656 Ssed_1420 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001473159.1 1684700 R 425104 CDS YP_001473160.1 157374560 5609657 complement(1686440..1686889) 1 NC_009831.1 KEGG: slo:Shew_1280 transcriptional regulator, CopG family; CopG family transcriptional regulator 1686889 5609657 Ssed_1421 Shewanella sediminis HAW-EB3 CopG family transcriptional regulator YP_001473160.1 1686440 R 425104 CDS YP_001473161.1 157374561 5609658 complement(1686849..1687592) 1 NC_009831.1 KEGG: slo:Shew_1281 hypothetical protein; hypothetical protein 1687592 5609658 Ssed_1422 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473161.1 1686849 R 425104 CDS YP_001473162.1 157374562 5610228 1688204..1688428 1 NC_009831.1 KEGG: sfr:Sfri_1108 hypothetical protein; hypothetical protein 1688428 5610228 Ssed_1423 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473162.1 1688204 D 425104 CDS YP_001473163.1 157374563 5610229 1688573..1688875 1 NC_009831.1 KEGG: slo:Shew_1283 NrfJ-related protein; NrfJ-related protein 1688875 5610229 Ssed_1424 Shewanella sediminis HAW-EB3 NrfJ-related protein YP_001473163.1 1688573 D 425104 CDS YP_001473164.1 157374564 5610230 1689018..1689563 1 NC_009831.1 KEGG: slo:Shew_1284 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1689563 5610230 Ssed_1425 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001473164.1 1689018 D 425104 CDS YP_001473165.1 157374565 5610231 complement(1689639..1690088) 1 NC_009831.1 KEGG: son:SO3319 hypothetical protein; hypothetical protein 1690088 5610231 Ssed_1426 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473165.1 1689639 R 425104 CDS YP_001473166.1 157374566 5610289 complement(1690454..1692199) 1 NC_009831.1 KEGG: slo:Shew_1285 5'-nucleotidase; 5'-nucleotidase 1692199 5610289 Ssed_1427 Shewanella sediminis HAW-EB3 5'-nucleotidase YP_001473166.1 1690454 R 425104 CDS YP_001473167.1 157374567 5610290 complement(1692487..1693569) 1 NC_009831.1 KEGG: slo:Shew_1286 protein of unknown function DUF21; hypothetical protein 1693569 5610290 Ssed_1428 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473167.1 1692487 R 425104 CDS YP_001473168.1 157374568 5610291 1693728..1694849 1 NC_009831.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1694849 5610291 Ssed_1429 Shewanella sediminis HAW-EB3 ribosomal RNA large subunit methyltransferase N YP_001473168.1 1693728 D 425104 CDS YP_001473169.1 157374569 5611548 1694883..1695671 1 NC_009831.1 KEGG: slo:Shew_1288 type IV pilus biogenesis/stability protein PilW; type IV pilus biogenesis/stability protein PilW 1695671 5611548 Ssed_1430 Shewanella sediminis HAW-EB3 type IV pilus biogenesis/stability protein PilW YP_001473169.1 1694883 D 425104 CDS YP_001473170.1 157374570 5611549 1695671..1696603 1 NC_009831.1 KEGG: slo:Shew_1289 hypothetical protein; hypothetical protein 1696603 5611549 Ssed_1431 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473170.1 1695671 D 425104 CDS YP_001473171.1 157374571 5611550 1696707..1697822 1 NC_009831.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1697822 ispG 5611550 ispG Shewanella sediminis HAW-EB3 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001473171.1 1696707 D 425104 CDS YP_001473172.1 157374572 5611551 1697982..1699256 1 NC_009831.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1699256 hisS 5611551 hisS Shewanella sediminis HAW-EB3 histidyl-tRNA synthetase YP_001473172.1 1697982 D 425104 CDS YP_001473173.1 157374573 5609844 1699270..1699890 1 NC_009831.1 KEGG: slo:Shew_1292 tetratricopeptide TPR_4; hypothetical protein 1699890 5609844 Ssed_1434 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473173.1 1699270 D 425104 CDS YP_001473174.1 157374574 5609845 1699902..1701089 1 NC_009831.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 1701089 5609845 Ssed_1435 Shewanella sediminis HAW-EB3 outer membrane protein assembly complex subunit YfgL YP_001473174.1 1699902 D 425104 CDS YP_001473175.1 157374575 5609846 1701194..1702660 1 NC_009831.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1702660 engA 5609846 engA Shewanella sediminis HAW-EB3 GTP-binding protein EngA YP_001473175.1 1701194 D 425104 CDS YP_001473176.1 157374576 5609847 1703214..1704386 1 NC_009831.1 KEGG: saz:Sama_0077 transcriptional regulator, MerR family; MerR family transcriptional regulator 1704386 5609847 Ssed_1437 Shewanella sediminis HAW-EB3 MerR family transcriptional regulator YP_001473176.1 1703214 D 425104 CDS YP_001473177.1 157374577 5609648 1705153..1706625 1 NC_009831.1 KEGG: sbl:Sbal_2317 RNA-directed DNA polymerase; RNA-directed DNA polymerase 1706625 5609648 Ssed_1438 Shewanella sediminis HAW-EB3 RNA-directed DNA polymerase YP_001473177.1 1705153 D 425104 CDS YP_001473178.1 157374578 5609649 complement(1706979..1707635) 1 NC_009831.1 KEGG: slo:Shew_2590 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 1707635 5609649 Ssed_1439 Shewanella sediminis HAW-EB3 hexapaptide repeat-containing transferase YP_001473178.1 1706979 R 425104 CDS YP_001473179.1 157374579 5609650 complement(1707604..1708329) 1 NC_009831.1 KEGG: slo:Shew_2589 protein of unknown function UPF0066; hypothetical protein 1708329 5609650 Ssed_1440 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473179.1 1707604 R 425104 CDS YP_001473180.1 157374580 5610954 complement(1708390..1708773) 1 NC_009831.1 KEGG: shw:Sputw3181_1493 lipoprotein; lipoprotein 1708773 5610954 Ssed_1441 Shewanella sediminis HAW-EB3 lipoprotein YP_001473180.1 1708390 R 425104 CDS YP_001473181.1 157374581 5610955 complement(1708896..1710215) 1 NC_009831.1 KEGG: slo:Shew_2587 hypothetical protein; hypothetical protein 1710215 5610955 Ssed_1442 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473181.1 1708896 R 425104 CDS YP_001473182.1 157374582 5610956 complement(1710212..1713286) 1 NC_009831.1 KEGG: slo:Shew_2586 amidohydrolase; amidohydrolase 1713286 5610956 Ssed_1443 Shewanella sediminis HAW-EB3 amidohydrolase YP_001473182.1 1710212 R 425104 CDS YP_001473183.1 157374583 5610957 complement(1713446..1713838) 1 NC_009831.1 KEGG: slo:Shew_2585 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 1713838 5610957 Ssed_1444 Shewanella sediminis HAW-EB3 histone family protein nucleoid-structuring protein H-NS YP_001473183.1 1713446 R 425104 CDS YP_001473184.1 157374584 5610943 1714159..1714908 1 NC_009831.1 KEGG: slo:Shew_2584 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 1714908 5610943 Ssed_1445 Shewanella sediminis HAW-EB3 electron transfer flavoprotein subunit beta YP_001473184.1 1714159 D 425104 CDS YP_001473185.1 157374585 5610944 1714908..1715831 1 NC_009831.1 KEGG: slo:Shew_2583 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 1715831 5610944 Ssed_1446 Shewanella sediminis HAW-EB3 electron transfer flavoprotein subunit alpha YP_001473185.1 1714908 D 425104 CDS YP_001473186.1 157374586 5610945 1716289..1717854 1 NC_009831.1 KEGG: slo:Shew_2582 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 1717854 5610945 Ssed_1447 Shewanella sediminis HAW-EB3 Na+/H+ antiporter NhaC YP_001473186.1 1716289 D 425104 CDS YP_001473187.1 157374587 5610946 complement(1717995..1720163) 1 NC_009831.1 KEGG: slo:Shew_2581 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 1720163 5610946 Ssed_1448 Shewanella sediminis HAW-EB3 peptidyl-dipeptidase Dcp YP_001473187.1 1717995 R 425104 CDS YP_001473188.1 157374588 5610882 1720444..1721022 1 NC_009831.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 1721022 5610882 Ssed_1449 Shewanella sediminis HAW-EB3 thymidine kinase YP_001473188.1 1720444 D 425104 CDS YP_001473189.1 157374589 5610883 complement(1721196..1721633) 1 NC_009831.1 KEGG: cps:CPS_3144 hypothetical protein; hypothetical protein 1721633 5610883 Ssed_1450 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473189.1 1721196 R 425104 CDS YP_001473190.1 157374590 5610884 complement(1721765..1722343) 1 NC_009831.1 KEGG: shm:Shewmr7_0473 methylation site containing protein; methylation site containing protein 1722343 5610884 Ssed_1451 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001473190.1 1721765 R 425104 CDS YP_001473191.1 157374591 5610885 complement(1722727..1723383) 1 NC_009831.1 KEGG: slo:Shew_2576 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase 1723383 5610885 Ssed_1452 Shewanella sediminis HAW-EB3 3-oxoacid CoA-transferase YP_001473191.1 1722727 R 425104 CDS YP_001473192.1 157374592 5610893 complement(1723400..1724113) 1 NC_009831.1 KEGG: shm:Shewmr7_2399 3-oxoacid CoA-transferase, A subunit; 3-oxoacid CoA-transferase 1724113 5610893 Ssed_1453 Shewanella sediminis HAW-EB3 3-oxoacid CoA-transferase YP_001473192.1 1723400 R 425104 CDS YP_001473193.1 157374593 5610894 complement(1724127..1725017) 1 NC_009831.1 KEGG: slo:Shew_2574 pyruvate carboxyltransferase; pyruvate carboxyltransferase 1725017 5610894 Ssed_1454 Shewanella sediminis HAW-EB3 pyruvate carboxyltransferase YP_001473193.1 1724127 R 425104 CDS YP_001473194.1 157374594 5610895 complement(1725019..1727094) 1 NC_009831.1 KEGG: slo:Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L 1727094 5610895 Ssed_1455 Shewanella sediminis HAW-EB3 carbamoyl-phosphate synthase subunit L YP_001473194.1 1725019 R 425104 CDS YP_001473195.1 157374595 5610889 complement(1727096..1727935) 1 NC_009831.1 KEGG: slo:Shew_2572 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1727935 5610889 Ssed_1456 Shewanella sediminis HAW-EB3 enoyl-CoA hydratase/isomerase YP_001473195.1 1727096 R 425104 CDS YP_001473196.1 157374596 5610890 complement(1728064..1729671) 1 NC_009831.1 KEGG: sdn:Sden_2246 propionyl-CoA carboxylase; propionyl-CoA carboxylase 1729671 5610890 Ssed_1457 Shewanella sediminis HAW-EB3 propionyl-CoA carboxylase YP_001473196.1 1728064 R 425104 CDS YP_001473197.1 157374597 5610891 complement(1729740..1730909) 1 NC_009831.1 KEGG: slo:Shew_2570 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 1730909 5610891 Ssed_1458 Shewanella sediminis HAW-EB3 acyl-CoA dehydrogenase YP_001473197.1 1729740 R 425104 CDS YP_001473198.1 157374598 5610892 complement(1730970..1731368) 1 NC_009831.1 KEGG: slo:Shew_2569 transcriptional regulator, MerR family; MerR family transcriptional regulator 1731368 5610892 Ssed_1459 Shewanella sediminis HAW-EB3 MerR family transcriptional regulator YP_001473198.1 1730970 R 425104 CDS YP_001473199.1 157374599 5610871 1731907..1733823 1 NC_009831.1 KEGG: slo:Shew_2568 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 1733823 5610871 Ssed_1460 Shewanella sediminis HAW-EB3 AMP-dependent synthetase/ligase YP_001473199.1 1731907 D 425104 CDS YP_001473200.1 157374600 5610872 1734400..1735953 1 NC_009831.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1735953 5610872 Ssed_1461 Shewanella sediminis HAW-EB3 6-phosphogluconate dehydrogenase YP_001473200.1 1734400 D 425104 CDS YP_001473201.1 157374601 5610873 complement(1736017..1737429) 1 NC_009831.1 KEGG: hch:HCH_01482 HD-GYP domain; HD-GYP domain-containing protein 1737429 5610873 Ssed_1462 Shewanella sediminis HAW-EB3 HD-GYP domain-containing protein YP_001473201.1 1736017 R 425104 CDS YP_001473202.1 157374602 5610874 1737611..1738510 1 NC_009831.1 KEGG: pin:Ping_2245 hypothetical protein; hypothetical protein 1738510 5610874 Ssed_1463 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473202.1 1737611 D 425104 CDS YP_001473203.1 157374603 5610860 complement(1738604..1739476) 1 NC_009831.1 KEGG: slo:Shew_2558 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1739476 5610860 Ssed_1464 Shewanella sediminis HAW-EB3 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001473203.1 1738604 R 425104 CDS YP_001473204.1 157374604 5610861 1739898..1740821 1 NC_009831.1 KEGG: slo:Shew_2557 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1740821 5610861 Ssed_1465 Shewanella sediminis HAW-EB3 short-chain dehydrogenase/reductase SDR YP_001473204.1 1739898 D 425104 CDS YP_001473205.1 157374605 5610862 1740909..1741775 1 NC_009831.1 KEGG: slo:Shew_2556 acyl-CoA thioesterase II; palmitoyl-CoA hydrolase 1741775 5610862 Ssed_1466 Shewanella sediminis HAW-EB3 palmitoyl-CoA hydrolase YP_001473205.1 1740909 D 425104 CDS YP_001473206.1 157374606 5610758 1741906..1742295 1 NC_009831.1 KEGG: slo:Shew_2555 hypothetical protein; hypothetical protein 1742295 5610758 Ssed_1467 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473206.1 1741906 D 425104 CDS YP_001473207.1 157374607 5610759 1742405..1742998 1 NC_009831.1 KEGG: shm:Shewmr7_2669 protein of unknown function DUF925; hypothetical protein 1742998 5610759 Ssed_1468 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473207.1 1742405 D 425104 CDS YP_001473208.1 157374608 5610760 1743333..1743980 1 NC_009831.1 receptor for colicin S4; outer membrane protein W 1743980 5610760 Ssed_1469 Shewanella sediminis HAW-EB3 outer membrane protein W YP_001473208.1 1743333 D 425104 CDS YP_001473209.1 157374609 5610761 complement(1744071..1744838) 1 NC_009831.1 KEGG: slo:Shew_2553 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1744838 5610761 Ssed_1470 Shewanella sediminis HAW-EB3 short-chain dehydrogenase/reductase SDR YP_001473209.1 1744071 R 425104 CDS YP_001473210.1 157374610 5610772 1745326..1745727 1 NC_009831.1 KEGG: slo:Shew_2552 hypothetical protein; hypothetical protein 1745727 5610772 Ssed_1471 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473210.1 1745326 D 425104 CDS YP_001473211.1 157374611 5610773 1745811..1746755 1 NC_009831.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1746755 5610773 Ssed_1472 Shewanella sediminis HAW-EB3 homoserine O-succinyltransferase YP_001473211.1 1745811 D 425104 CDS YP_001473212.1 157374612 5610774 1747063..1748253 1 NC_009831.1 KEGG: slo:Shew_1667 acetyl-CoA acetyltransferase; Acetyl-CoA C-acetyltransferase 1748253 5610774 Ssed_1473 Shewanella sediminis HAW-EB3 Acetyl-CoA C-acetyltransferase YP_001473212.1 1747063 D 425104 CDS YP_001473213.1 157374613 5610775 1748425..1749930 1 NC_009831.1 KEGG: slo:Shew_1668 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1749930 5610775 Ssed_1474 Shewanella sediminis HAW-EB3 methylmalonate-semialdehyde dehydrogenase YP_001473213.1 1748425 D 425104 CDS YP_001473214.1 157374614 5610616 1750148..1751305 1 NC_009831.1 KEGG: slo:Shew_1669 butyryl-CoA dehydrogenase; butyryl-CoA dehydrogenase 1751305 5610616 Ssed_1475 Shewanella sediminis HAW-EB3 butyryl-CoA dehydrogenase YP_001473214.1 1750148 D 425104 CDS YP_001473215.1 157374615 5610617 1751447..1752220 1 NC_009831.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1752220 5610617 Ssed_1476 Shewanella sediminis HAW-EB3 enoyl-CoA hydratase YP_001473215.1 1751447 D 425104 CDS YP_001473216.1 157374616 5610618 1752220..1753380 1 NC_009831.1 KEGG: sfr:Sfri_1342 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1753380 5610618 Ssed_1477 Shewanella sediminis HAW-EB3 enoyl-CoA hydratase/isomerase YP_001473216.1 1752220 D 425104 CDS YP_001473217.1 157374617 5610693 1753553..1754479 1 NC_009831.1 KEGG: shn:Shewana3_2766 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 1754479 5610693 Ssed_1478 Shewanella sediminis HAW-EB3 3-hydroxyisobutyrate dehydrogenase YP_001473217.1 1753553 D 425104 CDS YP_001473218.1 157374618 5610694 1754484..1755242 1 NC_009831.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1755242 fabG 5610694 fabG Shewanella sediminis HAW-EB3 3-ketoacyl-ACP reductase YP_001473218.1 1754484 D 425104 CDS YP_001473219.1 157374619 5610695 complement(1755480..1755791) 1 NC_009831.1 KEGG: pol:Bpro_3928 hypothetical protein; hypothetical protein 1755791 5610695 Ssed_1480 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473219.1 1755480 R 425104 CDS YP_001473220.1 157374620 5610696 1756141..1758075 1 NC_009831.1 KEGG: sdn:Sden_1155 radical SAM; radical SAM family protein 1758075 5610696 Ssed_1481 Shewanella sediminis HAW-EB3 radical SAM family protein YP_001473220.1 1756141 D 425104 CDS YP_001473221.1 157374621 5610557 1758508..1758756 1 NC_009831.1 KEGG: shw:Sputw3181_2696 hypothetical protein; hypothetical protein 1758756 5610557 Ssed_1482 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473221.1 1758508 D 425104 CDS YP_001473222.1 157374622 5610558 1758793..1760844 1 NC_009831.1 KEGG: sbl:Sbal_1503 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 1760844 5610558 Ssed_1483 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001473222.1 1758793 D 425104 CDS YP_001473223.1 157374623 5610559 complement(1760964..1761344) 1 NC_009831.1 KEGG: sbl:Sbal_1504 transcriptional regulator, MerR family; MerR family transcriptional regulator 1761344 5610559 Ssed_1484 Shewanella sediminis HAW-EB3 MerR family transcriptional regulator YP_001473223.1 1760964 R 425104 CDS YP_001473224.1 157374624 5610560 1761485..1763743 1 NC_009831.1 KEGG: sbl:Sbal_1505 copper-translocating P-type ATPase; copper-translocating P-type ATPase 1763743 5610560 Ssed_1485 Shewanella sediminis HAW-EB3 copper-translocating P-type ATPase YP_001473224.1 1761485 D 425104 CDS YP_001473225.1 157374625 5612678 1763921..1765495 1 NC_009831.1 KEGG: slo:Shew_1676 ABC transporter-related protein; ABC transporter-like protein 1765495 5612678 Ssed_1486 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001473225.1 1763921 D 425104 CDS YP_001473226.1 157374626 5612679 complement(1765809..1767020) 1 NC_009831.1 KEGG: ppr:PBPRB1458 NupC family protein (permease); NupC family protein (permease) 1767020 5612679 Ssed_1487 Shewanella sediminis HAW-EB3 NupC family protein (permease) YP_001473226.1 1765809 R 425104 CDS YP_001473227.1 157374627 5612680 complement(1767595..1768956) 1 NC_009831.1 KEGG: slo:Shew_1677 leucyl aminopeptidase; leucyl aminopeptidase 1768956 5612680 Ssed_1488 Shewanella sediminis HAW-EB3 leucyl aminopeptidase YP_001473227.1 1767595 R 425104 CDS YP_001473228.1 157374628 5613000 complement(1769146..1769544) 1 NC_009831.1 KEGG: slo:Shew_1678 hypothetical protein; hypothetical protein 1769544 5613000 Ssed_1489 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473228.1 1769146 R 425104 CDS YP_001473229.1 157374629 5613001 1769950..1771407 1 NC_009831.1 KEGG: ppr:PBPRA1527 transport protein, PTR2 family; PTR2 family transport protein 1771407 5613001 Ssed_1490 Shewanella sediminis HAW-EB3 PTR2 family transport protein YP_001473229.1 1769950 D 425104 CDS YP_001473230.1 157374630 5613002 complement(1771527..1772282) 1 NC_009831.1 KEGG: ppr:PBPRA1876 hypothetical ribonuclease HI; ribonuclease HI 1772282 5613002 Ssed_1491 Shewanella sediminis HAW-EB3 ribonuclease HI YP_001473230.1 1771527 R 425104 CDS YP_001473231.1 157374631 5613003 complement(1772432..1773040) 1 NC_009831.1 KEGG: shw:Sputw3181_2672 protein of unknown function DUF1415; hypothetical protein 1773040 5613003 Ssed_1492 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473231.1 1772432 R 425104 CDS YP_001473232.1 157374632 5611977 complement(1773074..1773667) 1 NC_009831.1 KEGG: shw:Sputw3181_2671 lysine exporter protein (LysE/YggA); lysine exporter protein (LysE/YggA) 1773667 5611977 Ssed_1493 Shewanella sediminis HAW-EB3 lysine exporter protein (LysE/YggA) YP_001473232.1 1773074 R 425104 CDS YP_001473233.1 157374633 5611978 1773863..1774426 1 NC_009831.1 KEGG: slo:Shew_1686 hypothetical protein; hypothetical protein 1774426 5611978 Ssed_1494 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473233.1 1773863 D 425104 CDS YP_001473234.1 157374634 5611979 1774845..1775813 1 NC_009831.1 hypothetical protein 1775813 5611979 Ssed_1495 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473234.1 1774845 D 425104 CDS YP_001473235.1 157374635 5611980 complement(1775972..1778122) 1 NC_009831.1 KEGG: slo:Shew_1688 TonB-dependent receptor; TonB-dependent receptor 1778122 5611980 Ssed_1496 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001473235.1 1775972 R 425104 CDS YP_001473236.1 157374636 5610360 complement(1778291..1779454) 1 NC_009831.1 KEGG: vfi:VFA0834 NirV precursor; protein NirV 1779454 5610360 Ssed_1497 Shewanella sediminis HAW-EB3 protein NirV YP_001473236.1 1778291 R 425104 CDS YP_001473237.1 157374637 5610361 complement(1779969..1782032) 1 NC_009831.1 KEGG: slo:Shew_3044 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1782032 5610361 Ssed_1498 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001473237.1 1779969 R 425104 CDS YP_001473238.1 157374638 5610362 complement(1782455..1783309) 1 NC_009831.1 KEGG: she:Shewmr4_2564 hypothetical protein; hypothetical protein 1783309 5610362 Ssed_1499 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473238.1 1782455 R 425104 CDS YP_001473239.1 157374639 5610363 complement(1783547..1784047) 1 NC_009831.1 KEGG: slo:Shew_1697 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 1784047 5610363 Ssed_1500 Shewanella sediminis HAW-EB3 amino acid-binding ACT domain-containing protein YP_001473239.1 1783547 R 425104 CDS YP_001473240.1 157374640 5610815 1784230..1786488 1 NC_009831.1 KEGG: slo:Shew_1698 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1786488 5610815 Ssed_1501 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001473240.1 1784230 D 425104 CDS YP_001473241.1 157374641 5610816 1786659..1788311 1 NC_009831.1 KEGG: slo:Shew_1699 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 1788311 5610816 Ssed_1502 Shewanella sediminis HAW-EB3 phosphate ABC transporter permease YP_001473241.1 1786659 D 425104 CDS YP_001473242.1 157374642 5610817 1788431..1789249 1 NC_009831.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1789249 5610817 Ssed_1503 Shewanella sediminis HAW-EB3 phosphate transporter ATP-binding protein YP_001473242.1 1788431 D 425104 CDS YP_001473243.1 157374643 5610713 1789369..1790079 1 NC_009831.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 1790079 5610713 Ssed_1504 Shewanella sediminis HAW-EB3 transcriptional regulator PhoU YP_001473243.1 1789369 D 425104 CDS YP_001473244.1 157374644 5610714 1790478..1792484 1 NC_009831.1 KEGG: shw:Sputw3181_2658 choline/carnitine/betaine transporter; choline/carnitine/betaine transporter 1792484 5610714 Ssed_1505 Shewanella sediminis HAW-EB3 choline/carnitine/betaine transporter YP_001473244.1 1790478 D 425104 CDS YP_001473245.1 157374645 5610715 1792680..1793042 1 NC_009831.1 KEGG: slo:Shew_1709 HNH nuclease; hypothetical protein 1793042 5610715 Ssed_1506 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473245.1 1792680 D 425104 CDS YP_001473246.1 157374646 5610716 complement(1793126..1793374) 1 NC_009831.1 KEGG: slo:Shew_1710 protein of unknown function DUF1289; hypothetical protein 1793374 5610716 Ssed_1507 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473246.1 1793126 R 425104 CDS YP_001473247.1 157374647 5613533 1793675..1794853 1 NC_009831.1 KEGG: slo:Shew_1711 conserved hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 1794853 5613533 Ssed_1508 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001473247.1 1793675 D 425104 CDS YP_001473248.1 157374648 5613534 1795234..1796514 1 NC_009831.1 KEGG: spc:Sputcn32_1444 hypothetical protein; hypothetical protein 1796514 5613534 Ssed_1509 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473248.1 1795234 D 425104 CDS YP_001473249.1 157374649 5613535 1796774..1797823 1 NC_009831.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1797823 5613535 Ssed_1510 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP synthase YP_001473249.1 1796774 D 425104 CDS YP_001473250.1 157374650 5613536 1797987..1798874 1 NC_009831.1 KEGG: sbl:Sbal_1551 alpha/beta hydrolase fold; alpha/beta hydrolase 1798874 5613536 Ssed_1511 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001473250.1 1797987 D 425104 CDS YP_001473251.1 157374651 5613345 1798971..1800728 1 NC_009831.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase 1800728 5613345 Ssed_1512 Shewanella sediminis HAW-EB3 peptide synthase YP_001473251.1 1798971 D 425104 CDS YP_001473252.1 157374652 5613346 1800734..1801831 1 NC_009831.1 KEGG: ppr:PBPRA1465 steroid dehydrogenase; steroid dehydrogenase 1801831 5613346 Ssed_1513 Shewanella sediminis HAW-EB3 steroid dehydrogenase YP_001473252.1 1800734 D 425104 CDS YP_001473253.1 157374653 5613347 1801989..1802438 1 NC_009831.1 KEGG: sdn:Sden_1374 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1802438 5613347 Ssed_1514 Shewanella sediminis HAW-EB3 glutathione-dependent formaldehyde-activating protein YP_001473253.1 1801989 D 425104 CDS YP_001473254.1 157374654 5613389 complement(1802495..1803343) 1 NC_009831.1 KEGG: slo:Shew_2547 pseudouridine synthase; pseudouridine synthase 1803343 5613389 Ssed_1515 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001473254.1 1802495 R 425104 CDS YP_001473255.1 157374655 5613390 complement(1803411..1803740) 1 NC_009831.1 KEGG: maq:Maqu_1061 small multidrug resistance protein; small multidrug resistance protein 1803740 5613390 Ssed_1516 Shewanella sediminis HAW-EB3 small multidrug resistance protein YP_001473255.1 1803411 R 425104 CDS YP_001473256.1 157374656 5613391 1804267..1806015 1 NC_009831.1 KEGG: sbl:Sbal_1561 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 1806015 5613391 Ssed_1517 Shewanella sediminis HAW-EB3 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_001473256.1 1804267 D 425104 CDS YP_001473257.1 157374657 5613392 complement(1806057..1807214) 1 NC_009831.1 KEGG: slo:Shew_2528 transcriptional regulator, CdaR; transcriptional regulator CdaR 1807214 5613392 Ssed_1518 Shewanella sediminis HAW-EB3 transcriptional regulator CdaR YP_001473257.1 1806057 R 425104 CDS YP_001473258.1 157374658 5613215 complement(1807414..1808133) 1 NC_009831.1 hypothetical protein 1808133 5613215 Ssed_1519 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473258.1 1807414 R 425104 CDS YP_001473259.1 157374659 5613216 complement(1808366..1809337) 1 NC_009831.1 KEGG: saz:Sama_1202 GGDEF domain-like protein; diguanylate cyclase 1809337 5613216 Ssed_1520 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473259.1 1808366 R 425104 CDS YP_001473260.1 157374660 5613217 complement(1809479..1810123) 1 NC_009831.1 KEGG: shm:Shewmr7_2582 phage SPO1 DNA polymerase domain protein; phage SPO1 DNA polymerase domain-containing protein 1810123 5613217 Ssed_1521 Shewanella sediminis HAW-EB3 phage SPO1 DNA polymerase domain-containing protein YP_001473260.1 1809479 R 425104 CDS YP_001473261.1 157374661 5613218 complement(1810167..1810826) 1 NC_009831.1 KEGG: sbl:Sbal_1586 hypothetical protein; hypothetical protein 1810826 5613218 Ssed_1522 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473261.1 1810167 R 425104 CDS YP_001473262.1 157374662 5613299 complement(1811126..1813237) 1 NC_009831.1 KEGG: slo:Shew_2527 outer membrane protein precursor MtrB; outer membrane protein MtrB 1813237 5613299 Ssed_1523 Shewanella sediminis HAW-EB3 outer membrane protein MtrB YP_001473262.1 1811126 R 425104 CDS YP_001473263.1 157374663 5613300 complement(1813253..1814254) 1 NC_009831.1 KEGG: slo:Shew_2526 cytochrome c family protein; cytochrome c family protein 1814254 5613300 Ssed_1524 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001473263.1 1813253 R 425104 CDS YP_001473264.1 157374664 5613301 complement(1814334..1816316) 1 NC_009831.1 KEGG: sfr:Sfri_2637 decaheme cytochrome c; decaheme cytochrome c 1816316 5613301 Ssed_1525 Shewanella sediminis HAW-EB3 decaheme cytochrome c YP_001473264.1 1814334 R 425104 CDS YP_001473265.1 157374665 5613219 complement(1816751..1818967) 1 NC_009831.1 KEGG: slo:Shew_2524 decaheme cytochrome c; decaheme cytochrome c 1818967 5613219 Ssed_1526 Shewanella sediminis HAW-EB3 decaheme cytochrome c YP_001473265.1 1816751 R 425104 CDS YP_001473266.1 157374666 5613220 complement(1819448..1821616) 1 NC_009831.1 KEGG: slo:Shew_2522 decaheme cytochrome c; decaheme cytochrome c 1821616 5613220 Ssed_1527 Shewanella sediminis HAW-EB3 decaheme cytochrome c YP_001473266.1 1819448 R 425104 CDS YP_001473267.1 157374667 5613221 complement(1821682..1823622) 1 NC_009831.1 KEGG: slo:Shew_2521 decaheme cytochrome c MtrF; decaheme cytochrome c MtrF 1823622 5613221 Ssed_1528 Shewanella sediminis HAW-EB3 decaheme cytochrome c MtrF YP_001473267.1 1821682 R 425104 CDS YP_001473268.1 157374668 5613222 complement(1823757..1825892) 1 NC_009831.1 KEGG: slo:Shew_2520 outer membrane protein; outer membrane protein 1825892 5613222 Ssed_1529 Shewanella sediminis HAW-EB3 outer membrane protein YP_001473268.1 1823757 R 425104 CDS YP_001473269.1 157374669 5613496 complement(1825908..1826873) 1 NC_009831.1 KEGG: she:Shewmr4_2506 cytochrome c family protein; cytochrome c family protein 1826873 5613496 Ssed_1530 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001473269.1 1825908 R 425104 CDS YP_001473270.1 157374670 5613497 1827301..1827555 1 NC_009831.1 KEGG: shw:Sputw3181_2621 FeoA family protein; FeoA family protein 1827555 5613497 Ssed_1531 Shewanella sediminis HAW-EB3 FeoA family protein YP_001473270.1 1827301 D 425104 CDS YP_001473271.1 157374671 5613498 1827548..1829842 1 NC_009831.1 KEGG: slo:Shew_2517 ferrous iron transport protein B; ferrous iron transport protein B 1829842 5613498 Ssed_1532 Shewanella sediminis HAW-EB3 ferrous iron transport protein B YP_001473271.1 1827548 D 425104 CDS YP_001473272.1 157374672 5613499 1830005..1831675 1 NC_009831.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1831675 5613499 Ssed_1533 Shewanella sediminis HAW-EB3 glutaminyl-tRNA synthetase YP_001473272.1 1830005 D 425104 CDS YP_001473273.1 157374673 5610724 complement(1831844..1832440) 1 NC_009831.1 KEGG: slo:Shew_2515 protein of unknown function DUF1282; hypothetical protein 1832440 5610724 Ssed_1534 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473273.1 1831844 R 425104 CDS YP_001473274.1 157374674 5610725 1832806..1833582 1 NC_009831.1 KEGG: slo:Shew_2514 tRNA--hydroxylase; tRNA--hydroxylase 1833582 5610725 Ssed_1535 Shewanella sediminis HAW-EB3 tRNA--hydroxylase YP_001473274.1 1832806 D 425104 CDS YP_001473275.1 157374675 5610726 complement(1833661..1834389) 1 NC_009831.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 1834389 5610726 Ssed_1536 Shewanella sediminis HAW-EB3 UDP-2,3-diacylglucosamine hydrolase YP_001473275.1 1833661 R 425104 CDS YP_001473276.1 157374676 5612122 complement(1834399..1834962) 1 NC_009831.1 KEGG: slo:Shew_2512 peptidylprolyl isomerase; peptidyl-prolyl isomerase 1834962 5612122 Ssed_1537 Shewanella sediminis HAW-EB3 peptidyl-prolyl isomerase YP_001473276.1 1834399 R 425104 CDS YP_001473277.1 157374677 5612123 1835163..1836542 1 NC_009831.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1836542 cysS 5612123 cysS Shewanella sediminis HAW-EB3 cysteinyl-tRNA synthetase YP_001473277.1 1835163 D 425104 CDS YP_001473278.1 157374678 5612124 complement(1836651..1837505) 1 NC_009831.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1837505 5612124 Ssed_1539 Shewanella sediminis HAW-EB3 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001473278.1 1836651 R 425104 CDS YP_001473279.1 157374679 5610605 1838635..1839939 1 NC_009831.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1839939 tig 5610605 tig Shewanella sediminis HAW-EB3 trigger factor YP_001473279.1 1838635 D 425104 CDS YP_001473280.1 157374680 5613683 1840030..1840641 1 NC_009831.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1840641 clpP 5613683 clpP Shewanella sediminis HAW-EB3 ATP-dependent Clp protease proteolytic subunit YP_001473280.1 1840030 D 425104 CDS YP_001473281.1 157374681 5613684 1840725..1842002 1 NC_009831.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1842002 clpX 5613684 clpX Shewanella sediminis HAW-EB3 ATP-dependent protease ATP-binding subunit ClpX YP_001473281.1 1840725 D 425104 CDS YP_001473282.1 157374682 5613685 1842153..1844498 1 NC_009831.1 KEGG: slo:Shew_2506 ATP-dependent protease La; endopeptidase La 1844498 5613685 Ssed_1543 Shewanella sediminis HAW-EB3 endopeptidase La YP_001473282.1 1842153 D 425104 CDS YP_001473283.1 157374683 5613686 1844772..1845044 1 NC_009831.1 KEGG: slo:Shew_2505 histone family protein DNA-binding protein; histone family protein DNA-binding protein 1845044 5613686 Ssed_1544 Shewanella sediminis HAW-EB3 histone family protein DNA-binding protein YP_001473283.1 1844772 D 425104 CDS YP_001473284.1 157374684 5614154 1845253..1847118 1 NC_009831.1 KEGG: slo:Shew_2504 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1847118 5614154 Ssed_1545 Shewanella sediminis HAW-EB3 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001473284.1 1845253 D 425104 CDS YP_001473285.1 157374685 5614155 complement(1847387..1847596) 1 NC_009831.1 KEGG: slo:Shew_3338 TOBE domain protein; TOBE domain-containing protein 1847596 5614155 Ssed_1546 Shewanella sediminis HAW-EB3 TOBE domain-containing protein YP_001473285.1 1847387 R 425104 CDS YP_001473286.1 157374686 5614156 complement(1847748..1848950) 1 NC_009831.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 1848950 5614156 Ssed_1547 Shewanella sediminis HAW-EB3 trans-2-enoyl-CoA reductase YP_001473286.1 1847748 R 425104 CDS YP_001473287.1 157374687 5614157 complement(1849076..1849861) 1 NC_009831.1 KEGG: shm:Shewmr7_2556 ABC transporter related; ABC transporter 1849861 5614157 Ssed_1548 Shewanella sediminis HAW-EB3 ABC transporter YP_001473287.1 1849076 R 425104 CDS YP_001473288.1 157374688 5613825 complement(1849836..1850849) 1 NC_009831.1 KEGG: slo:Shew_2501 oligopeptide/dipeptide ABC transporter, ATPase subunit; oligopeptide/dipeptide ABC transporter ATPase 1850849 5613825 Ssed_1549 Shewanella sediminis HAW-EB3 oligopeptide/dipeptide ABC transporter ATPase YP_001473288.1 1849836 R 425104 CDS YP_001473289.1 157374689 5613826 complement(1850867..1851757) 1 NC_009831.1 KEGG: slo:Shew_2500 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1851757 5613826 Ssed_1550 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001473289.1 1850867 R 425104 CDS YP_001473290.1 157374690 5613827 complement(1851744..1852775) 1 NC_009831.1 KEGG: slo:Shew_2499 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1852775 5613827 Ssed_1551 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001473290.1 1851744 R 425104 CDS YP_001473291.1 157374691 5612197 complement(1852775..1854430) 1 NC_009831.1 KEGG: slo:Shew_2498 extracellular solute-binding protein, family 5; extracellular solute-binding protein 1854430 5612197 Ssed_1552 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001473291.1 1852775 R 425104 CDS YP_001473292.1 157374692 5612198 complement(1854505..1855572) 1 NC_009831.1 KEGG: slo:Shew_2497 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 1855572 5612198 Ssed_1553 Shewanella sediminis HAW-EB3 sigma-54 dependent trancsriptional regulator YP_001473292.1 1854505 R 425104 CDS YP_001473293.1 157374693 5612199 1855750..1856433 1 NC_009831.1 KEGG: slo:Shew_2496 phage shock protein A, PspA; phage shock protein A, PspA 1856433 5612199 Ssed_1554 Shewanella sediminis HAW-EB3 phage shock protein A, PspA YP_001473293.1 1855750 D 425104 CDS YP_001473294.1 157374694 5612200 1856454..1856687 1 NC_009831.1 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B 1856687 pspB 5612200 pspB Shewanella sediminis HAW-EB3 phage shock protein B YP_001473294.1 1856454 D 425104 CDS YP_001473295.1 157374695 5612934 1856680..1857075 1 NC_009831.1 KEGG: slo:Shew_2494 phage shock protein C, PspC; phage shock protein C, PspC 1857075 5612934 Ssed_1556 Shewanella sediminis HAW-EB3 phage shock protein C, PspC YP_001473295.1 1856680 D 425104 CDS YP_001473296.1 157374696 5612935 1857125..1858579 1 NC_009831.1 KEGG: slo:Shew_2493 protein of unknown function DUF463, YcjX family protein; hypothetical protein 1858579 5612935 Ssed_1557 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473296.1 1857125 D 425104 CDS YP_001473297.1 157374697 5612936 1858670..1859776 1 NC_009831.1 KEGG: slo:Shew_2492 conserved hypothetical protein 1620; hypothetical protein 1859776 5612936 Ssed_1558 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473297.1 1858670 D 425104 CDS YP_001473298.1 157374698 5612937 1859954..1861132 1 NC_009831.1 KEGG: she:Shewmr4_2477 methionine gamma-lyase; methionine gamma-lyase 1861132 5612937 Ssed_1559 Shewanella sediminis HAW-EB3 methionine gamma-lyase YP_001473298.1 1859954 D 425104 CDS YP_001473299.1 157374699 5613183 complement(1861251..1862648) 1 NC_009831.1 KEGG: slo:Shew_2490 anion transporter; anion transporter 1862648 5613183 Ssed_1560 Shewanella sediminis HAW-EB3 anion transporter YP_001473299.1 1861251 R 425104 CDS YP_001473300.1 157374700 5613184 1863047..1863364 1 NC_009831.1 KEGG: spc:Sputcn32_1508 competence protein ComEA helix-hairpin-helix repeat protein; helix-hairpin-helix repeat-containing competence protein ComEA 1863364 5613184 Ssed_1561 Shewanella sediminis HAW-EB3 helix-hairpin-helix repeat-containing competence protein ComEA YP_001473300.1 1863047 D 425104 CDS YP_001473301.1 157374701 5611724 complement(1863728..1863997) 1 NC_009831.1 KEGG: shn:Shewana3_2635 hypothetical protein; hypothetical protein 1863997 5611724 Ssed_1562 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473301.1 1863728 R 425104 CDS YP_001473302.1 157374702 5612860 complement(1864388..1865080) 1 NC_009831.1 KEGG: slo:Shew_2486 hypothetical protein; hypothetical protein 1865080 5612860 Ssed_1563 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473302.1 1864388 R 425104 CDS YP_001473303.1 157374703 5612861 complement(1865131..1865799) 1 NC_009831.1 KEGG: slo:Shew_2485 primosomal replication protein N''; primosomal replication protein N'' 1865799 5612861 Ssed_1564 Shewanella sediminis HAW-EB3 primosomal replication protein N'' YP_001473303.1 1865131 R 425104 CDS YP_001473304.1 157374704 5612862 complement(1865796..1866569) 1 NC_009831.1 KEGG: slo:Shew_2484 protein of unknown function DUF81; hypothetical protein 1866569 5612862 Ssed_1565 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473304.1 1865796 R 425104 CDS YP_001473305.1 157374705 5612863 complement(1866578..1868656) 1 NC_009831.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1868656 dinG 5612863 dinG Shewanella sediminis HAW-EB3 ATP-dependent DNA helicase DinG YP_001473305.1 1866578 R 425104 CDS YP_001473306.1 157374706 5612554 1868850..1871231 1 NC_009831.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 1871231 5612554 Ssed_1567 Shewanella sediminis HAW-EB3 DNA polymerase II YP_001473306.1 1868850 D 425104 CDS YP_001473307.1 157374707 5612555 1871461..1872672 1 NC_009831.1 KEGG: sbl:Sbal_1631 porin, gram-negative type; porin 1872672 5612555 Ssed_1568 Shewanella sediminis HAW-EB3 porin YP_001473307.1 1871461 D 425104 CDS YP_001473308.1 157374708 5612556 1873498..1876107 1 NC_009831.1 KEGG: slo:Shew_2480 TonB-dependent receptor; TonB-dependent receptor 1876107 5612556 Ssed_1569 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001473308.1 1873498 D 425104 CDS YP_001473309.1 157374709 5612557 1876204..1877160 1 NC_009831.1 KEGG: slo:Shew_2479 methyltransferase type 11; type 11 methyltransferase 1877160 5612557 Ssed_1570 Shewanella sediminis HAW-EB3 type 11 methyltransferase YP_001473309.1 1876204 D 425104 CDS YP_001473310.1 157374710 5612375 1877755..1878537 1 NC_009831.1 KEGG: saz:Sama_1254 conserved hypothetical protein; hypothetical protein 1878537 5612375 Ssed_1571 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473310.1 1877755 D 425104 CDS YP_001473311.1 157374711 5612376 1878537..1879892 1 NC_009831.1 KEGG: slo:Shew_2477 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1879892 5612376 Ssed_1572 Shewanella sediminis HAW-EB3 MotA/TolQ/ExbB proton channel YP_001473311.1 1878537 D 425104 CDS YP_001473312.1 157374712 5612377 1879892..1880416 1 NC_009831.1 KEGG: sdn:Sden_2423 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1880416 5612377 Ssed_1573 Shewanella sediminis HAW-EB3 MotA/TolQ/ExbB proton channel YP_001473312.1 1879892 D 425104 CDS YP_001473313.1 157374713 5610852 1880430..1880834 1 NC_009831.1 KEGG: sdn:Sden_2422 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1880834 5610852 Ssed_1574 Shewanella sediminis HAW-EB3 biopolymer transport protein ExbD/TolR YP_001473313.1 1880430 D 425104 CDS YP_001473314.1 157374714 5610853 1880836..1881456 1 NC_009831.1 KEGG: slo:Shew_2474 TonB family protein; TonB family protein 1881456 5610853 Ssed_1575 Shewanella sediminis HAW-EB3 TonB family protein YP_001473314.1 1880836 D 425104 CDS YP_001473315.1 157374715 5610854 1881459..1882718 1 NC_009831.1 KEGG: sfr:Sfri_2621 tetratricopeptide domain protein; hypothetical protein 1882718 5610854 Ssed_1576 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473315.1 1881459 D 425104 CDS YP_001473316.1 157374716 5610855 complement(1882783..1883292) 1 NC_009831.1 KEGG: slo:Shew_2472 diguanylate cyclase; diguanylate cyclase 1883292 5610855 Ssed_1577 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473316.1 1882783 R 425104 CDS YP_001473317.1 157374717 5612465 1883416..1885266 1 NC_009831.1 KEGG: slo:Shew_2471 protein of unknown function DUF885; hypothetical protein 1885266 5612465 Ssed_1578 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473317.1 1883416 D 425104 CDS YP_001473318.1 157374718 5612466 1885416..1885694 1 NC_009831.1 KEGG: slo:Shew_2470 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1885694 5612466 Ssed_1579 Shewanella sediminis HAW-EB3 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001473318.1 1885416 D 425104 CDS YP_001473319.1 157374719 5612467 1885720..1886256 1 NC_009831.1 KEGG: sbl:Sbal_1649 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1886256 5612467 Ssed_1580 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001473319.1 1885720 D 425104 CDS YP_001473320.1 157374720 5612468 1886418..1886651 1 NC_009831.1 KEGG: slo:Shew_2468 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1886651 5612468 Ssed_1581 Shewanella sediminis HAW-EB3 RNA-binding S4 domain-containing protein YP_001473320.1 1886418 D 425104 CDS YP_001473321.1 157374721 5612357 1886669..1887055 1 NC_009831.1 KEGG: slo:Shew_2467 protein of unknown function DUF1260; hypothetical protein 1887055 5612357 Ssed_1582 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473321.1 1886669 D 425104 CDS YP_001473322.1 157374722 5612358 1887329..1889299 1 NC_009831.1 KEGG: slo:Shew_2466 hypothetical protein; hypothetical protein 1889299 5612358 Ssed_1583 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473322.1 1887329 D 425104 CDS YP_001473323.1 157374723 5612359 complement(1889375..1890262) 1 NC_009831.1 KEGG: son:SO2847 transcriptional regulator, LysR family; LysR family transcriptional regulator 1890262 5612359 Ssed_1584 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473323.1 1889375 R 425104 CDS YP_001473324.1 157374724 5612126 1890409..1891188 1 NC_009831.1 KEGG: pin:Ping_1433 permease with 5 transmembrane domains; permease 1891188 5612126 Ssed_1585 Shewanella sediminis HAW-EB3 permease YP_001473324.1 1890409 D 425104 CDS YP_001473325.1 157374725 5612127 complement(1892094..1893353) 1 NC_009831.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 1893353 avtA 5612127 avtA Shewanella sediminis HAW-EB3 valine--pyruvate transaminase YP_001473325.1 1892094 R 425104 CDS YP_001473326.1 157374726 5612128 complement(1893672..1894928) 1 NC_009831.1 KEGG: tcx:Tcr_1067 hypothetical protein; hypothetical protein 1894928 5612128 Ssed_1587 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473326.1 1893672 R 425104 CDS YP_001473327.1 157374727 5612129 1895262..1896407 1 NC_009831.1 KEGG: slo:Shew_2457 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 1896407 5612129 Ssed_1588 Shewanella sediminis HAW-EB3 nuclease SbcCD subunit D YP_001473327.1 1895262 D 425104 CDS YP_001473328.1 157374728 5612023 1896404..1899460 1 NC_009831.1 KEGG: shn:Shewana3_2611 exonuclease SbcC; exonuclease SbcC 1899460 5612023 Ssed_1589 Shewanella sediminis HAW-EB3 exonuclease SbcC YP_001473328.1 1896404 D 425104 CDS YP_001473329.1 157374729 5612024 1899859..1901133 1 NC_009831.1 KEGG: slo:Shew_2455 peptidase M23B; peptidase M23B 1901133 5612024 Ssed_1590 Shewanella sediminis HAW-EB3 peptidase M23B YP_001473329.1 1899859 D 425104 CDS YP_001473330.1 157374730 5612025 1901458..1902150 1 NC_009831.1 KEGG: sbl:Sbal_4021 ABC-type amino acid transport/signal transduction system; amino acid ABC transporter substrate-binding protein 1902150 5612025 Ssed_1591 Shewanella sediminis HAW-EB3 amino acid ABC transporter substrate-binding protein YP_001473330.1 1901458 D 425104 CDS YP_001473331.1 157374731 5612026 complement(1902147..1902650) 1 NC_009831.1 KEGG: shm:Shewmr7_2516 protein of unknown function DUF45; hypothetical protein 1902650 5612026 Ssed_1592 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473331.1 1902147 R 425104 CDS YP_001473332.1 157374732 5611759 complement(1902998..1903444) 1 NC_009831.1 KEGG: slo:Shew_2453 hypothetical protein; hypothetical protein 1903444 5611759 Ssed_1593 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473332.1 1902998 R 425104 CDS YP_001473333.1 157374733 5611760 complement(1903572..1904969) 1 NC_009831.1 KEGG: slo:Shew_2452 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1904969 5611760 Ssed_1594 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001473333.1 1903572 R 425104 CDS YP_001473334.1 157374734 5611761 1905177..1906109 1 NC_009831.1 KEGG: shw:Sputw3181_2561 patatin; patatin 1906109 5611761 Ssed_1595 Shewanella sediminis HAW-EB3 patatin YP_001473334.1 1905177 D 425104 CDS YP_001473335.1 157374735 5611762 complement(1906188..1907186) 1 NC_009831.1 KEGG: slo:Shew_2563 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 1907186 5611762 Ssed_1596 Shewanella sediminis HAW-EB3 alcohol dehydrogenase YP_001473335.1 1906188 R 425104 CDS YP_001473336.1 157374736 5611959 1907426..1907908 1 NC_009831.1 KEGG: slo:Shew_2562 transcriptional regulator, MarR family; MarR family transcriptional regulator 1907908 5611959 Ssed_1597 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001473336.1 1907426 D 425104 CDS YP_001473337.1 157374737 5611960 1908466..1908978 1 NC_009831.1 hypothetical protein 1908978 5611960 Ssed_1598 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473337.1 1908466 D 425104 CDS YP_001473338.1 157374738 5611961 1909199..1909921 1 NC_009831.1 KEGG: slo:Shew_2450 hypothetical protein; hypothetical protein 1909921 5611961 Ssed_1599 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473338.1 1909199 D 425104 CDS YP_001473339.1 157374739 5611767 1910178..1912295 1 NC_009831.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1912295 5611767 Ssed_1600 Shewanella sediminis HAW-EB3 anaerobic ribonucleoside triphosphate reductase YP_001473339.1 1910178 D 425104 CDS YP_001473340.1 157374740 5611768 1912492..1912956 1 NC_009831.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 1912956 nrdG 5611768 nrdG Shewanella sediminis HAW-EB3 anaerobic ribonucleotide reductase-activating protein YP_001473340.1 1912492 D 425104 CDS YP_001473341.1 157374741 5611769 1913078..1913434 1 NC_009831.1 KEGG: sdn:Sden_1446 hypothetical protein; hypothetical protein 1913434 5611769 Ssed_1602 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473341.1 1913078 D 425104 CDS YP_001473342.1 157374742 5611770 1913730..1914347 1 NC_009831.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 1914347 ribA 5611770 ribA Shewanella sediminis HAW-EB3 GTP cyclohydrolase II YP_001473342.1 1913730 D 425104 CDS YP_001473343.1 157374743 5611659 1914419..1915237 1 NC_009831.1 KEGG: sfr:Sfri_2437 hypothetical protein; hypothetical protein 1915237 5611659 Ssed_1604 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473343.1 1914419 D 425104 CDS YP_001473344.1 157374744 5611660 complement(1915261..1916148) 1 NC_009831.1 KEGG: cps:CPS_1457 transcriptional regulator, LysR family; LysR family transcriptional regulator 1916148 5611660 Ssed_1605 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473344.1 1915261 R 425104 CDS YP_001473345.1 157374745 5611661 1916292..1917269 1 NC_009831.1 KEGG: ppr:PBPRB0221 adh_zinc, zinc-binding dehydrogenases; adh_zinc, zinc-binding dehydrogenase 1917269 5611661 Ssed_1606 Shewanella sediminis HAW-EB3 adh_zinc, zinc-binding dehydrogenase YP_001473345.1 1916292 D 425104 CDS YP_001473346.1 157374746 5611662 1917303..1918022 1 NC_009831.1 KEGG: nha:Nham_2100 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1918022 5611662 Ssed_1607 Shewanella sediminis HAW-EB3 short-chain dehydrogenase/reductase SDR YP_001473346.1 1917303 D 425104 CDS YP_001473347.1 157374747 5613339 complement(1918105..1919637) 1 NC_009831.1 KEGG: sbl:Sbal_0106 transcriptional regulator, XRE family; XRE family transcriptional regulator 1919637 5613339 Ssed_1608 Shewanella sediminis HAW-EB3 XRE family transcriptional regulator YP_001473347.1 1918105 R 425104 CDS YP_001473348.1 157374748 5613340 1919845..1920363 1 NC_009831.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 1920363 5613340 Ssed_1609 Shewanella sediminis HAW-EB3 malate synthase YP_001473348.1 1919845 D 425104 CDS YP_001473349.1 157374749 5613341 complement(1920475..1920831) 1 NC_009831.1 KEGG: slo:Shew_2444 hypothetical protein; hypothetical protein 1920831 5613341 Ssed_1610 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473349.1 1920475 R 425104 CDS YP_001473350.1 157374750 5611578 complement(1920959..1923367) 1 NC_009831.1 KEGG: slo:Shew_2443 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 1923367 5611578 Ssed_1611 Shewanella sediminis HAW-EB3 peptidase S8/S53 subtilisin kexin sedolisin YP_001473350.1 1920959 R 425104 CDS YP_001473351.1 157374751 5611579 complement(1923994..1924392) 1 NC_009831.1 KEGG: shm:Shewmr7_1456 rhodanese domain protein; rhodanese domain-containing protein 1924392 5611579 Ssed_1612 Shewanella sediminis HAW-EB3 rhodanese domain-containing protein YP_001473351.1 1923994 R 425104 CDS YP_001473352.1 157374752 5611580 complement(1924502..1924720) 1 NC_009831.1 KEGG: saz:Sama_2183 conserved hypothetical protein; hypothetical protein 1924720 5611580 Ssed_1613 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473352.1 1924502 R 425104 CDS YP_001473353.1 157374753 5611581 complement(1924798..1928097) 1 NC_009831.1 KEGG: sbl:Sbal_2775 acriflavin resistance protein; acriflavin resistance protein 1928097 5611581 Ssed_1614 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001473353.1 1924798 R 425104 CDS YP_001473354.1 157374754 5613739 complement(1928108..1929151) 1 NC_009831.1 KEGG: spc:Sputcn32_2473 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1929151 5613739 Ssed_1615 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001473354.1 1928108 R 425104 CDS YP_001473355.1 157374755 5613740 complement(1929311..1930027) 1 NC_009831.1 KEGG: slo:Shew_2438 protein of unknown function DUF541; hypothetical protein 1930027 5613740 Ssed_1616 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473355.1 1929311 R 425104 CDS YP_001473356.1 157374756 5613741 complement(1930111..1930494) 1 NC_009831.1 KEGG: slo:Shew_2437 hypothetical protein; hypothetical protein 1930494 5613741 Ssed_1617 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473356.1 1930111 R 425104 CDS YP_001473357.1 157374757 5613742 complement(1930627..1931949) 1 NC_009831.1 KEGG: sbl:Sbal_2771 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 1931949 5613742 Ssed_1618 Shewanella sediminis HAW-EB3 aromatic hydrocarbon degradation membrane protein YP_001473357.1 1930627 R 425104 CDS YP_001473358.1 157374758 5611560 complement(1932317..1933768) 1 NC_009831.1 KEGG: slo:Shew_2435 sodium/proline symporter; sodium/proline symporter 1933768 5611560 Ssed_1619 Shewanella sediminis HAW-EB3 sodium/proline symporter YP_001473358.1 1932317 R 425104 CDS YP_001473359.1 157374759 5611561 complement(1933919..1934623) 1 NC_009831.1 KEGG: slo:Shew_2434 hypothetical protein; hypothetical protein 1934623 5611561 Ssed_1620 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473359.1 1933919 R 425104 CDS YP_001473360.1 157374760 5611562 complement(1934616..1935179) 1 NC_009831.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1935179 5611562 Ssed_1621 Shewanella sediminis HAW-EB3 RNA polymerase sigma factor YP_001473360.1 1934616 R 425104 CDS YP_001473361.1 157374761 5611384 complement(1935287..1936921) 1 NC_009831.1 KEGG: slo:Shew_2432 hypothetical protein; hypothetical protein 1936921 5611384 Ssed_1622 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473361.1 1935287 R 425104 CDS YP_001473362.1 157374762 5611385 complement(1937004..1938938) 1 NC_009831.1 KEGG: shn:Shewana3_1455 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1938938 5611385 Ssed_1623 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473362.1 1937004 R 425104 CDS YP_001473363.1 157374763 5611386 complement(1938941..1939933) 1 NC_009831.1 KEGG: shw:Sputw3181_1544 von Willebrand factor, type A; von Willebrand factor A 1939933 5611386 Ssed_1624 Shewanella sediminis HAW-EB3 von Willebrand factor A YP_001473363.1 1938941 R 425104 CDS YP_001473364.1 157374764 5611387 complement(1939927..1940442) 1 NC_009831.1 KEGG: slo:Shew_2429 hypothetical protein; hypothetical protein 1940442 5611387 Ssed_1625 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473364.1 1939927 R 425104 CDS YP_001473365.1 157374765 5611388 complement(1940442..1941371) 1 NC_009831.1 KEGG: slo:Shew_2428 protein of unknown function DUF58; hypothetical protein 1941371 5611388 Ssed_1626 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473365.1 1940442 R 425104 CDS YP_001473366.1 157374766 5611389 complement(1941372..1942328) 1 NC_009831.1 KEGG: shw:Sputw3181_1547 ATPase associated with various cellular activities, AAA_3; ATPase 1942328 5611389 Ssed_1627 Shewanella sediminis HAW-EB3 ATPase YP_001473366.1 1941372 R 425104 CDS YP_001473367.1 157374767 5611390 1942774..1944084 1 NC_009831.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 1944084 fadI 5611390 fadI Shewanella sediminis HAW-EB3 3-ketoacyl-CoA thiolase YP_001473367.1 1942774 D 425104 CDS YP_001473368.1 157374768 5611391 1944090..1946237 1 NC_009831.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 1946237 fadJ 5611391 fadJ Shewanella sediminis HAW-EB3 multifunctional fatty acid oxidation complex subunit alpha YP_001473368.1 1944090 D 425104 CDS YP_001473369.1 157374769 5614034 1946507..1946731 1 NC_009831.1 KEGG: slo:Shew_2424 hypothetical protein; hypothetical protein 1946731 5614034 Ssed_1630 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473369.1 1946507 D 425104 CDS YP_001473370.1 157374770 5614035 complement(1946865..1946984) 1 NC_009831.1 KEGG: slo:Shew_2423 hypothetical protein; hypothetical protein 1946984 5614035 Ssed_1631 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473370.1 1946865 R 425104 CDS YP_001473371.1 157374771 5614036 complement(1947003..1947608) 1 NC_009831.1 KEGG: slo:Shew_2422 hypothetical protein; hypothetical protein 1947608 5614036 Ssed_1632 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473371.1 1947003 R 425104 CDS YP_001473372.1 157374772 5611009 complement(1947752..1952095) 1 NC_009831.1 KEGG: slo:Shew_2421 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1952095 5611009 Ssed_1633 Shewanella sediminis HAW-EB3 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001473372.1 1947752 R 425104 CDS YP_001473373.1 157374773 5611010 complement(1952522..1955311) 1 NC_009831.1 KEGG: slo:Shew_2420 peptidase M16 domain protein; peptidase M16 domain-containing protein 1955311 5611010 Ssed_1634 Shewanella sediminis HAW-EB3 peptidase M16 domain-containing protein YP_001473373.1 1952522 R 425104 CDS YP_001473374.1 157374774 5611011 1955580..1956068 1 NC_009831.1 KEGG: slo:Shew_2419 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase, SixA 1956068 5611011 Ssed_1635 Shewanella sediminis HAW-EB3 phosphohistidine phosphatase, SixA YP_001473374.1 1955580 D 425104 CDS YP_001473375.1 157374775 5611012 complement(1956330..1956860) 1 NC_009831.1 KEGG: slo:Shew_2418 Smr protein/MutS2; hypothetical protein 1956860 5611012 Ssed_1636 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473375.1 1956330 R 425104 CDS YP_001473376.1 157374776 5611035 1957036..1957980 1 NC_009831.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1957980 5611035 Ssed_1637 Shewanella sediminis HAW-EB3 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001473376.1 1957036 D 425104 CDS YP_001473377.1 157374777 5611036 1958129..1959223 1 NC_009831.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1959223 5611036 Ssed_1638 Shewanella sediminis HAW-EB3 chorismate synthase YP_001473377.1 1958129 D 425104 CDS YP_001473378.1 157374778 5611037 1959434..1960591 1 NC_009831.1 KEGG: shw:Sputw3181_1558 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1960591 5611037 Ssed_1639 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001473378.1 1959434 D 425104 CDS YP_001473379.1 157374779 5611038 1960677..1961801 1 NC_009831.1 KEGG: son:SO3077 hypothetical protein; hypothetical protein 1961801 5611038 Ssed_1640 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473379.1 1960677 D 425104 CDS YP_001473380.1 157374780 5611046 1961866..1962135 1 NC_009831.1 KEGG: shw:Sputw3181_1560 hypothetical protein; hypothetical protein 1962135 5611046 Ssed_1641 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473380.1 1961866 D 425104 CDS YP_001473381.1 157374781 5611047 1962152..1962685 1 NC_009831.1 KEGG: sfr:Sfri_2663 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1962685 5611047 Ssed_1642 Shewanella sediminis HAW-EB3 tRNA/rRNA methyltransferase SpoU YP_001473381.1 1962152 D 425104 CDS YP_001473382.1 157374782 5611048 complement(1962782..1964920) 1 NC_009831.1 KEGG: slo:Shew_2411 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1964920 5611048 Ssed_1643 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001473382.1 1962782 R 425104 CDS YP_001473383.1 157374783 5611049 1965031..1966242 1 NC_009831.1 KEGG: slo:Shew_2410 beta-ketoacyl synthase; beta-ketoacyl synthase 1966242 5611049 Ssed_1644 Shewanella sediminis HAW-EB3 beta-ketoacyl synthase YP_001473383.1 1965031 D 425104 CDS YP_001473384.1 157374784 5611054 complement(1966518..1967552) 1 NC_009831.1 KEGG: vvy:VVA0936 conserved hypothetical protein; hypothetical protein 1967552 5611054 Ssed_1645 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473384.1 1966518 R 425104 CDS YP_001473385.1 157374785 5611055 complement(1967540..1968121) 1 NC_009831.1 KEGG: vvy:VVA0935 protein-glutamate methylesterase; protein-glutamate methylesterase 1968121 5611055 Ssed_1646 Shewanella sediminis HAW-EB3 protein-glutamate methylesterase YP_001473385.1 1967540 R 425104 CDS YP_001473386.1 157374786 5611056 complement(1968125..1968964) 1 NC_009831.1 KEGG: vvy:VVA0934 methylase of chemotaxis methyl-accepting protein; protein-glutamate O-methyltransferase 1968964 5611056 Ssed_1647 Shewanella sediminis HAW-EB3 protein-glutamate O-methyltransferase YP_001473386.1 1968125 R 425104 CDS YP_001473387.1 157374787 5611317 complement(1968966..1973090) 1 NC_009831.1 KEGG: vvy:VVA0933 signal transduction histidine kinase; histidine kinase 1973090 5611317 Ssed_1648 Shewanella sediminis HAW-EB3 histidine kinase YP_001473387.1 1968966 R 425104 CDS YP_001473388.1 157374788 5611318 1973396..1974559 1 NC_009831.1 KEGG: she:Shewmr4_1423 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit 1974559 5611318 Ssed_1649 Shewanella sediminis HAW-EB3 D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit YP_001473388.1 1973396 D 425104 CDS YP_001473389.1 157374789 5611319 1974562..1975578 1 NC_009831.1 KEGG: slo:Shew_2308 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1975578 5611319 Ssed_1650 Shewanella sediminis HAW-EB3 aspartate-semialdehyde dehydrogenase YP_001473389.1 1974562 D 425104 CDS YP_001473390.1 157374790 5611320 1975792..1978629 1 NC_009831.1 KEGG: slo:Shew_2307 hypothetical protein; hypothetical protein 1978629 5611320 Ssed_1651 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473390.1 1975792 D 425104 CDS YP_001473391.1 157374791 5610950 1978822..1979607 1 NC_009831.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1979607 truA 5610950 truA Shewanella sediminis HAW-EB3 tRNA pseudouridine synthase A YP_001473391.1 1978822 D 425104 CDS YP_001473392.1 157374792 5610951 1979683..1980948 1 NC_009831.1 KEGG: she:Shewmr4_1427 FolC bifunctional protein; dihydrofolate synthase 1980948 5610951 Ssed_1653 Shewanella sediminis HAW-EB3 dihydrofolate synthase YP_001473392.1 1979683 D 425104 CDS YP_001473393.1 157374793 5610952 1981086..1981706 1 NC_009831.1 KEGG: slo:Shew_2304 sporulation domain protein; sporulation domain-containing protein 1981706 5610952 Ssed_1654 Shewanella sediminis HAW-EB3 sporulation domain-containing protein YP_001473393.1 1981086 D 425104 CDS YP_001473394.1 157374794 5610953 1981820..1982308 1 NC_009831.1 KEGG: slo:Shew_2303 colicin V production protein; colicin V production protein 1982308 5610953 Ssed_1655 Shewanella sediminis HAW-EB3 colicin V production protein YP_001473394.1 1981820 D 425104 CDS YP_001473395.1 157374795 5610188 1982410..1983924 1 NC_009831.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1983924 5610188 Ssed_1656 Shewanella sediminis HAW-EB3 amidophosphoribosyltransferase YP_001473395.1 1982410 D 425104 CDS YP_001473396.1 157374796 5610189 1984188..1984664 1 NC_009831.1 KEGG: dps:DP3020 hypothetical protein; hypothetical protein 1984664 5610189 Ssed_1657 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473396.1 1984188 D 425104 CDS YP_001473397.1 157374797 5610190 1984830..1986869 1 NC_009831.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 1986869 5610190 Ssed_1658 Shewanella sediminis HAW-EB3 DNA topoisomerase III YP_001473397.1 1984830 D 425104 CDS YP_001473398.1 157374798 5610415 complement(1986886..1987086) 1 NC_009831.1 KEGG: slo:Shew_2284 hypothetical protein; hypothetical protein 1987086 5610415 Ssed_1659 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473398.1 1986886 R 425104 CDS YP_001473399.1 157374799 5610416 1987629..1988495 1 NC_009831.1 KEGG: cps:CPS_4002 hypothetical protein; hypothetical protein 1988495 5610416 Ssed_1660 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473399.1 1987629 D 425104 CDS YP_001473400.1 157374800 5610417 complement(1989276..1990565) 1 NC_009831.1 KEGG: slo:Shew_2270 alpha/beta hydrolase fold; alpha/beta hydrolase 1990565 5610417 Ssed_1661 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001473400.1 1989276 R 425104 CDS YP_001473401.1 157374801 5610418 1990806..1991477 1 NC_009831.1 KEGG: slo:Shew_2269 beta-lactamase domain protein; beta-lactamase domain-containing protein 1991477 5610418 Ssed_1662 Shewanella sediminis HAW-EB3 beta-lactamase domain-containing protein YP_001473401.1 1990806 D 425104 CDS YP_001473402.1 157374802 5610383 1991813..1992325 1 NC_009831.1 KEGG: son:SO3047 hypothetical protein; hypothetical protein 1992325 5610383 Ssed_1663 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473402.1 1991813 D 425104 CDS YP_001473403.1 157374803 5610384 1992640..1994088 1 NC_009831.1 KEGG: slo:Shew_2263 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1994088 5610384 Ssed_1664 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001473403.1 1992640 D 425104 CDS YP_001473404.1 157374804 5610385 complement(1994466..1996484) 1 NC_009831.1 KEGG: pmy:Pmen_2951 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1996484 5610385 Ssed_1665 Shewanella sediminis HAW-EB3 NADH:flavin oxidoreductase YP_001473404.1 1994466 R 425104 CDS YP_001473405.1 157374805 5610386 1996593..1997675 1 NC_009831.1 KEGG: pmy:Pmen_2953 helix-turn-helix-domain containing protein, AraC type; helix-turn-helix-domain-containing protein 1997675 5610386 Ssed_1666 Shewanella sediminis HAW-EB3 helix-turn-helix-domain-containing protein YP_001473405.1 1996593 D 425104 CDS YP_001473406.1 157374806 5612134 complement(1997705..1999426) 1 NC_009831.1 KEGG: pau:PA14_21340 long-chain-fatty-acid--CoA ligase; long-chain-fatty-acid--CoA ligase 1999426 5612134 Ssed_1667 Shewanella sediminis HAW-EB3 long-chain-fatty-acid--CoA ligase YP_001473406.1 1997705 R 425104 CDS YP_001473407.1 157374807 5612135 complement(1999811..2000617) 1 NC_009831.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 2000617 5612135 Ssed_1668 Shewanella sediminis HAW-EB3 exonuclease III YP_001473407.1 1999811 R 425104 CDS YP_001473408.1 157374808 5612136 complement(2000654..2000953) 1 NC_009831.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein 2000953 5612136 Ssed_1669 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473408.1 2000654 R 425104 CDS YP_001473409.1 157374809 5610165 complement(2001014..2001565) 1 NC_009831.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2001565 5610165 Ssed_1670 Shewanella sediminis HAW-EB3 intracellular septation protein A YP_001473409.1 2001014 R 425104 CDS YP_001473410.1 157374810 5610166 complement(2001694..2003211) 1 NC_009831.1 KEGG: slo:Shew_1009 peptidoglycan-binding domain 1 protein; type II secretory pathway ATPase ExeA 2003211 5610166 Ssed_1671 Shewanella sediminis HAW-EB3 type II secretory pathway ATPase ExeA YP_001473410.1 2001694 R 425104 CDS YP_001473411.1 157374811 5610167 complement(2003566..2005641) 1 NC_009831.1 KEGG: cps:CPS_4957 hypothetical protein; hypothetical protein 2005641 5610167 Ssed_1672 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473411.1 2003566 R 425104 CDS YP_001473412.1 157374812 5610168 complement(2005868..2007787) 1 NC_009831.1 KEGG: pfl:PFL_2240 receptor; receptor 2007787 5610168 Ssed_1673 Shewanella sediminis HAW-EB3 receptor YP_001473412.1 2005868 R 425104 CDS YP_001473413.1 157374813 5611816 complement(2008015..2008425) 1 NC_009831.1 KEGG: cff:CFF8240_0934 nickel-responsive regulator; nickel-responsive regulator 2008425 5611816 Ssed_1674 Shewanella sediminis HAW-EB3 nickel-responsive regulator YP_001473413.1 2008015 R 425104 CDS YP_001473414.1 157374814 5611817 2008622..2010160 1 NC_009831.1 KEGG: vfi:VF0681 oligopeptide-binding protein OppA; oligopeptide-binding protein OppA 2010160 5611817 Ssed_1675 Shewanella sediminis HAW-EB3 oligopeptide-binding protein OppA YP_001473414.1 2008622 D 425104 CDS YP_001473415.1 157374815 5611818 2010151..2011143 1 NC_009831.1 KEGG: asa:ASA_1795 ABC-type dipeptide/oligopeptide/nickel transporter, permease component; ABC-type dipeptide/oligopeptide/nickel transporter, permease component 2011143 5611818 Ssed_1676 Shewanella sediminis HAW-EB3 ABC-type dipeptide/oligopeptide/nickel transporter, permease component YP_001473415.1 2010151 D 425104 CDS YP_001473416.1 157374816 5611819 2011140..2011970 1 NC_009831.1 KEGG: vfi:VF0679 oligopeptide transport system permease OppC; oligopeptide transport system permease OppC 2011970 5611819 Ssed_1677 Shewanella sediminis HAW-EB3 oligopeptide transport system permease OppC YP_001473416.1 2011140 D 425104 CDS YP_001473417.1 157374817 5611082 2011945..2012673 1 NC_009831.1 KEGG: vfi:VF0678 oligopeptide transport ATP-binding protein OppD; oligopeptide transport ATP-binding protein OppD 2012673 5611082 Ssed_1678 Shewanella sediminis HAW-EB3 oligopeptide transport ATP-binding protein OppD YP_001473417.1 2011945 D 425104 CDS YP_001473418.1 157374818 5611083 2012657..2013247 1 NC_009831.1 KEGG: vfi:VF0677 dipeptide ABC transporter; dipeptide ABC transporter 2013247 5611083 Ssed_1679 Shewanella sediminis HAW-EB3 dipeptide ABC transporter YP_001473418.1 2012657 D 425104 CDS YP_001473419.1 157374819 5611084 2013538..2014743 1 NC_009831.1 KEGG: slo:Shew_2259 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2014743 5611084 Ssed_1680 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001473419.1 2013538 D 425104 CDS YP_001473420.1 157374820 5611085 complement(2014834..2015652) 1 NC_009831.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2015652 trpA 5611085 trpA Shewanella sediminis HAW-EB3 tryptophan synthase subunit alpha YP_001473420.1 2014834 R 425104 CDS YP_001473421.1 157374821 5609925 complement(2015639..2016862) 1 NC_009831.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2016862 5609925 Ssed_1682 Shewanella sediminis HAW-EB3 tryptophan synthase subunit beta YP_001473421.1 2015639 R 425104 CDS YP_001473422.1 157374822 5609926 complement(2017013..2018446) 1 NC_009831.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2018446 5609926 Ssed_1683 Shewanella sediminis HAW-EB3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_001473422.1 2017013 R 425104 CDS YP_001473423.1 157374823 5609927 complement(2018449..2019507) 1 NC_009831.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2019507 trpD 5609927 trpD Shewanella sediminis HAW-EB3 anthranilate phosphoribosyltransferase YP_001473423.1 2018449 R 425104 CDS YP_001473424.1 157374824 5610069 complement(2019504..2020109) 1 NC_009831.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2020109 5610069 Ssed_1685 Shewanella sediminis HAW-EB3 anthranilate synthase component II YP_001473424.1 2019504 R 425104 CDS YP_001473425.1 157374825 5610070 complement(2020106..2021665) 1 NC_009831.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2021665 5610070 Ssed_1686 Shewanella sediminis HAW-EB3 anthranilate synthase component I YP_001473425.1 2020106 R 425104 CDS YP_001473426.1 157374826 5610071 2022218..2023075 1 NC_009831.1 KEGG: slo:Shew_2250 PHP C-terminal domain protein; phosphotransferase domain-containing protein 2023075 5610071 Ssed_1687 Shewanella sediminis HAW-EB3 phosphotransferase domain-containing protein YP_001473426.1 2022218 D 425104 CDS YP_001473427.1 157374827 5610072 2023278..2023898 1 NC_009831.1 KEGG: slo:Shew_2249 SUA5/YciO/YrdC/YwlC family protein; SUA5/YciO/YrdC/YwlC family protein 2023898 5610072 Ssed_1688 Shewanella sediminis HAW-EB3 SUA5/YciO/YrdC/YwlC family protein YP_001473427.1 2023278 D 425104 CDS YP_001473428.1 157374828 5610013 2024010..2024798 1 NC_009831.1 KEGG: slo:Shew_2248 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 2024798 5610013 Ssed_1689 Shewanella sediminis HAW-EB3 chromosome segregation and condensation protein ScpA YP_001473428.1 2024010 D 425104 CDS YP_001473429.1 157374829 5610014 2024799..2025443 1 NC_009831.1 KEGG: slo:Shew_2247 transcriptional regulator; transcriptional regulator 2025443 5610014 Ssed_1690 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001473429.1 2024799 D 425104 CDS YP_001473430.1 157374830 5610015 2025436..2026302 1 NC_009831.1 KEGG: slo:Shew_2246 pseudouridine synthase; pseudouridine synthase 2026302 5610015 Ssed_1691 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001473430.1 2025436 D 425104 CDS YP_001473431.1 157374831 5610016 complement(2026550..2027287) 1 NC_009831.1 KEGG: slo:Shew_2409 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2027287 5610016 Ssed_1692 Shewanella sediminis HAW-EB3 short chain dehydrogenase YP_001473431.1 2026550 R 425104 CDS YP_001473432.1 157374832 5609630 2027549..2030035 1 NC_009831.1 KEGG: slo:Shew_2408 hypothetical protein; hypothetical protein 2030035 5609630 Ssed_1693 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473432.1 2027549 D 425104 CDS YP_001473433.1 157374833 5609631 2030438..2031469 1 NC_009831.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 2031469 5609631 Ssed_1694 Shewanella sediminis HAW-EB3 periplasmic protease YP_001473433.1 2030438 D 425104 CDS YP_001473434.1 157374834 5609632 complement(2031573..2032691) 1 NC_009831.1 KEGG: saz:Sama_1484 conserved hypothetical protein; hypothetical protein 2032691 5609632 Ssed_1695 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473434.1 2031573 R 425104 CDS YP_001473435.1 157374835 5609872 complement(2032795..2033391) 1 NC_009831.1 KEGG: sfr:Sfri_2568 arylesterase; arylesterase 2033391 5609872 Ssed_1696 Shewanella sediminis HAW-EB3 arylesterase YP_001473435.1 2032795 R 425104 CDS YP_001473436.1 157374836 5609873 2033408..2034160 1 NC_009831.1 KEGG: sdn:Sden_2367 ABC transporter related; ABC transporter 2034160 5609873 Ssed_1697 Shewanella sediminis HAW-EB3 ABC transporter YP_001473436.1 2033408 D 425104 CDS YP_001473437.1 157374837 5609874 2034160..2036631 1 NC_009831.1 KEGG: shm:Shewmr7_1545 protein of unknown function DUF214; hypothetical protein 2036631 5609874 Ssed_1698 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473437.1 2034160 D 425104 CDS YP_001473438.1 157374838 5609875 complement(2036708..2037631) 1 NC_009831.1 KEGG: shn:Shewana3_1542 conserved hypothetical protein; hypothetical protein 2037631 5609875 Ssed_1699 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473438.1 2036708 R 425104 CDS YP_001473439.1 157374839 5609961 2037876..2038955 1 NC_009831.1 KEGG: slo:Shew_2398 protein of unknown function UPF0118; hypothetical protein 2038955 5609961 Ssed_1700 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473439.1 2037876 D 425104 CDS YP_001473440.1 157374840 5609962 2038999..2039907 1 NC_009831.1 KEGG: she:Shewmr4_1486 conserved hypothetical protein 95; hypothetical protein 2039907 5609962 Ssed_1701 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473440.1 2038999 D 425104 CDS YP_001473441.1 157374841 5609963 complement(2040060..2040284) 1 NC_009831.1 KEGG: slo:Shew_2396 hypothetical protein; hypothetical protein 2040284 5609963 Ssed_1702 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473441.1 2040060 R 425104 CDS YP_001473442.1 157374842 5609964 complement(2040858..2041289) 1 NC_009831.1 KEGG: slo:Shew_2395 hypothetical protein; hypothetical protein 2041289 5609964 Ssed_1703 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473442.1 2040858 R 425104 CDS YP_001473443.1 157374843 5610338 complement(2041698..2043839) 1 NC_009831.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 2043839 5610338 Ssed_1704 Shewanella sediminis HAW-EB3 phosphate acetyltransferase YP_001473443.1 2041698 R 425104 CDS YP_001473444.1 157374844 5610339 complement(2043928..2045127) 1 NC_009831.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 2045127 5610339 Ssed_1705 Shewanella sediminis HAW-EB3 acetate kinase YP_001473444.1 2043928 R 425104 CDS YP_001473445.1 157374845 5610340 2045322..2045765 1 NC_009831.1 KEGG: sbl:Sbal_2673 protein of unknown function DUF412; hypothetical protein 2045765 5610340 Ssed_1706 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473445.1 2045322 D 425104 CDS YP_001473446.1 157374846 5610341 complement(2045811..2046551) 1 NC_009831.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 2046551 pflA 5610341 pflA Shewanella sediminis HAW-EB3 pyruvate formate lyase-activating enzyme 1 YP_001473446.1 2045811 R 425104 CDS YP_001473447.1 157374847 5613712 complement(2046645..2048927) 1 NC_009831.1 KEGG: slo:Shew_2390 formate acetyltransferase; formate C-acetyltransferase 2048927 5613712 Ssed_1708 Shewanella sediminis HAW-EB3 formate C-acetyltransferase YP_001473447.1 2046645 R 425104 CDS YP_001473448.1 157374848 5613713 complement(2049531..2051063) 1 NC_009831.1 KEGG: slo:Shew_2389 hypothetical protein; hypothetical protein 2051063 5613713 Ssed_1709 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473448.1 2049531 R 425104 CDS YP_001473449.1 157374849 5613714 2051994..2053469 1 NC_009831.1 KEGG: shw:Sputw3181_1633 formate/nitrite transporter; formate/nitrite transporter 2053469 5613714 Ssed_1710 Shewanella sediminis HAW-EB3 formate/nitrite transporter YP_001473449.1 2051994 D 425104 CDS YP_001473450.1 157374850 5611900 complement(2053538..2053657) 1 NC_009831.1 KEGG: shw:Sputw3181_1634 transcriptional regulator, LysR family; LysR family transcriptional regulator 2053657 5611900 Ssed_1711 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473450.1 2053538 R 425104 CDS YP_001473451.1 157374851 5611901 complement(2053749..2054660) 1 NC_009831.1 KEGG: shw:Sputw3181_1634 transcriptional regulator, LysR family; LysR family transcriptional regulator 2054660 5611901 Ssed_1712 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473451.1 2053749 R 425104 CDS YP_001473452.1 157374852 5611902 2055029..2055220 1 NC_009831.1 hypothetical protein 2055220 5611902 Ssed_1713 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473452.1 2055029 D 425104 CDS YP_001473453.1 157374853 5611903 2055213..2056664 1 NC_009831.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 2056664 panF 5611903 panF Shewanella sediminis HAW-EB3 sodium/panthothenate symporter YP_001473453.1 2055213 D 425104 CDS YP_001473454.1 157374854 5611591 2056843..2058384 1 NC_009831.1 KEGG: shm:Shewmr7_1563 C4-dicarboxylate anaerobic carrier; hypothetical protein 2058384 5611591 Ssed_1715 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473454.1 2056843 D 425104 CDS YP_001473455.1 157374855 5611592 complement(2059048..2061729) 1 NC_009831.1 KEGG: slo:Shew_2385 TonB-dependent receptor, plug; TonB-dependent receptor, plug 2061729 5611592 Ssed_1716 Shewanella sediminis HAW-EB3 TonB-dependent receptor, plug YP_001473455.1 2059048 R 425104 CDS YP_001473456.1 157374856 5611593 complement(2062303..2063271) 1 NC_009831.1 KEGG: sbl:Sbal_2665 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 2063271 5611593 Ssed_1717 Shewanella sediminis HAW-EB3 C4-dicarboxylate transporter/malic acid transport protein YP_001473456.1 2062303 R 425104 CDS YP_001473457.1 157374857 5611594 complement(2063388..2064461) 1 NC_009831.1 KEGG: sfr:Sfri_2128 O-methyltransferase; O-methyltransferase 2064461 5611594 Ssed_1718 Shewanella sediminis HAW-EB3 O-methyltransferase YP_001473457.1 2063388 R 425104 CDS YP_001473458.1 157374858 5610185 complement(2064883..2065314) 1 NC_009831.1 KEGG: pat:Patl_2171 CBS domain containing membrane protein; hypothetical protein 2065314 5610185 Ssed_1719 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473458.1 2064883 R 425104 CDS YP_001473459.1 157374859 5610186 2065598..2066263 1 NC_009831.1 KEGG: slo:Shew_2383 transcriptional regulator, TetR family; TetR family transcriptional regulator 2066263 5610186 Ssed_1720 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001473459.1 2065598 D 425104 CDS YP_001473460.1 157374860 5610187 complement(2066659..2067627) 1 NC_009831.1 KEGG: slo:Shew_2382 cysteine synthase A; cysteine synthase A 2067627 5610187 Ssed_1721 Shewanella sediminis HAW-EB3 cysteine synthase A YP_001473460.1 2066659 R 425104 CDS YP_001473461.1 157374861 5609635 2067922..2069133 1 NC_009831.1 KEGG: slo:Shew_2381 RDD domain containing protein; RDD domain-containing protein 2069133 5609635 Ssed_1722 Shewanella sediminis HAW-EB3 RDD domain-containing protein YP_001473461.1 2067922 D 425104 CDS YP_001473462.1 157374862 5609636 2069434..2070696 1 NC_009831.1 KEGG: sfr:Sfri_2466 diguanylate cyclase; diguanylate cyclase 2070696 5609636 Ssed_1723 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473462.1 2069434 D 425104 CDS YP_001473463.1 157374863 5609637 complement(2070700..2071614) 1 NC_009831.1 KEGG: hch:HCH_02324 transcriptional regulator; transcriptional regulator 2071614 5609637 Ssed_1724 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001473463.1 2070700 R 425104 CDS YP_001473464.1 157374864 5609638 2071652..2071921 1 NC_009831.1 hypothetical protein 2071921 5609638 Ssed_1725 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473464.1 2071652 D 425104 CDS YP_001473465.1 157374865 5610105 2071921..2072268 1 NC_009831.1 hypothetical protein 2072268 5610105 Ssed_1726 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473465.1 2071921 D 425104 CDS YP_001473466.1 157374866 5610106 2072782..2073678 1 NC_009831.1 KEGG: pau:PA14_23540 transcriptional activator; transcriptional activator 2073678 5610106 Ssed_1727 Shewanella sediminis HAW-EB3 transcriptional activator YP_001473466.1 2072782 D 425104 CDS YP_001473467.1 157374867 5610107 complement(2073730..2074734) 1 NC_009831.1 KEGG: sat:SYN_00385 hypothetical protein; hypothetical protein 2074734 5610107 Ssed_1728 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473467.1 2073730 R 425104 CDS YP_001473468.1 157374868 5610108 2075216..2076634 1 NC_009831.1 KEGG: dsy:DSY2839 tetrachloroethene dehalogenase; tetrachloroethene dehalogenase 2076634 5610108 Ssed_1729 Shewanella sediminis HAW-EB3 tetrachloroethene dehalogenase YP_001473468.1 2075216 D 425104 CDS YP_001473469.1 157374869 5609672 2076650..2076925 1 NC_009831.1 hypothetical protein 2076925 5609672 Ssed_1730 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473469.1 2076650 D 425104 CDS YP_001473470.1 157374870 5609673 2077026..2077748 1 NC_009831.1 KEGG: shn:Shewana3_4008 transcriptional regulator, LuxR family; hypothetical protein 2077748 5609673 Ssed_1731 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473470.1 2077026 D 425104 CDS YP_001473471.1 157374871 5609674 complement(2077861..2080233) 1 NC_009831.1 KEGG: sfr:Sfri_2465 hypothetical protein; hypothetical protein 2080233 5609674 Ssed_1732 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473471.1 2077861 R 425104 CDS YP_001473472.1 157374872 5609675 2081041..2081436 1 NC_009831.1 KEGG: sfu:Sfum_1481 hypothetical protein; hypothetical protein 2081436 5609675 Ssed_1733 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473472.1 2081041 D 425104 CDS YP_001473473.1 157374873 5609981 complement(2082121..2082894) 1 NC_009831.1 role in sulfur assimilation; sulfate transport protein CysZ 2082894 5609981 Ssed_1734 Shewanella sediminis HAW-EB3 sulfate transport protein CysZ YP_001473473.1 2082121 R 425104 CDS YP_001473474.1 157374874 5609982 2083099..2083998 1 NC_009831.1 KEGG: slo:Shew_2379 chromosome segregation protein SMC; chromosome segregation protein SMC 2083998 5609982 Ssed_1735 Shewanella sediminis HAW-EB3 chromosome segregation protein SMC YP_001473474.1 2083099 D 425104 CDS YP_001473475.1 157374875 5609983 2084070..2086514 1 NC_009831.1 KEGG: slo:Shew_2379 chromosome segregation protein SMC; chromosome segregation protein SMC 2086514 5609983 Ssed_1736 Shewanella sediminis HAW-EB3 chromosome segregation protein SMC YP_001473475.1 2084070 D 425104 CDS YP_001473476.1 157374876 5609820 2086538..2087563 1 NC_009831.1 KEGG: slo:Shew_2378 cell division protein ZipA; cell division protein ZipA 2087563 5609820 Ssed_1737 Shewanella sediminis HAW-EB3 cell division protein ZipA YP_001473476.1 2086538 D 425104 CDS YP_001473477.1 157374877 5609821 2087653..2089665 1 NC_009831.1 KEGG: slo:Shew_2377 DNA ligase, NAD-dependent; DNA ligase (NAD(+)) 2089665 5609821 Ssed_1738 Shewanella sediminis HAW-EB3 DNA ligase (NAD(+)) YP_001473477.1 2087653 D 425104 CDS YP_001473478.1 157374878 5609822 2089796..2090281 1 NC_009831.1 KEGG: son:SO2863 hypothetical protein; hypothetical protein 2090281 5609822 Ssed_1739 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473478.1 2089796 D 425104 CDS YP_001473479.1 157374879 5609823 2090939..2092144 1 NC_009831.1 KEGG: slo:Shew_2375 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2092144 5609823 Ssed_1740 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001473479.1 2090939 D 425104 CDS YP_001473480.1 157374880 5609744 2092221..2093081 1 NC_009831.1 KEGG: slo:Shew_2374 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2093081 5609744 Ssed_1741 Shewanella sediminis HAW-EB3 NAD-dependent epimerase/dehydratase YP_001473480.1 2092221 D 425104 CDS YP_001473481.1 157374881 5609745 2093116..2093748 1 NC_009831.1 KEGG: slo:Shew_2373 DsbA oxidoreductase; DsbA oxidoreductase 2093748 5609745 Ssed_1742 Shewanella sediminis HAW-EB3 DsbA oxidoreductase YP_001473481.1 2093116 D 425104 CDS YP_001473482.1 157374882 5609746 2094053..2094481 1 NC_009831.1 KEGG: son:SO0652 prophage MuSo1, positive regulator of late transcription; prophage MuSo1, positive regulator of late transcription 2094481 5609746 Ssed_1743 Shewanella sediminis HAW-EB3 prophage MuSo1, positive regulator of late transcription YP_001473482.1 2094053 D 425104 CDS YP_001473483.1 157374883 5609747 2094866..2095000 1 NC_009831.1 KEGG: son:SO0674 prophage MuSo1, protein Gp32; prophage MuSo1, protein Gp32 2095000 5609747 Ssed_1744 Shewanella sediminis HAW-EB3 prophage MuSo1, protein Gp32 YP_001473483.1 2094866 D 425104 CDS YP_001473484.1 157374884 5610148 2095315..2095581 1 NC_009831.1 KEGG: slo:Shew_2372 hypothetical protein; hypothetical protein 2095581 5610148 Ssed_1745 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473484.1 2095315 D 425104 CDS YP_001473485.1 157374885 5610149 2095609..2097327 1 NC_009831.1 KEGG: slo:Shew_2371 Na+/solute symporter; Na+/solute symporter 2097327 5610149 Ssed_1746 Shewanella sediminis HAW-EB3 Na+/solute symporter YP_001473485.1 2095609 D 425104 CDS YP_001473486.1 157374886 5610150 2097541..2100960 1 NC_009831.1 KEGG: mxa:MXAN_2579 metallophosphoesterase/PKD domain protein; hypothetical protein 2100960 5610150 Ssed_1747 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473486.1 2097541 D 425104 CDS YP_001473487.1 157374887 5610867 2100963..2101790 1 NC_009831.1 hypothetical protein 2101790 5610867 Ssed_1748 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473487.1 2100963 D 425104 CDS YP_001473488.1 157374888 5610868 2101889..2102437 1 NC_009831.1 KEGG: maq:Maqu_0948 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2102437 5610868 Ssed_1749 Shewanella sediminis HAW-EB3 CDP-alcohol phosphatidyltransferase YP_001473488.1 2101889 D 425104 CDS YP_001473489.1 157374889 5610869 2102482..2103012 1 NC_009831.1 hypothetical protein 2103012 5610869 Ssed_1750 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473489.1 2102482 D 425104 CDS YP_001473490.1 157374890 5610870 2103179..2105026 1 NC_009831.1 KEGG: slo:Shew_2369 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 2105026 5610870 Ssed_1751 Shewanella sediminis HAW-EB3 cyclic nucleotide-binding protein YP_001473490.1 2103179 D 425104 CDS YP_001473491.1 157374891 5610765 2105027..2105713 1 NC_009831.1 KEGG: slo:Shew_2368 exonuclease, RNase T and DNA polymerase III; exonuclease 2105713 5610765 Ssed_1752 Shewanella sediminis HAW-EB3 exonuclease YP_001473491.1 2105027 D 425104 CDS YP_001473492.1 157374892 5610766 complement(2105705..2107456) 1 NC_009831.1 KEGG: vfi:VFA0072 sensor protein LuxQ; sensor protein LuxQ 2107456 5610766 Ssed_1753 Shewanella sediminis HAW-EB3 sensor protein LuxQ YP_001473492.1 2105705 R 425104 CDS YP_001473493.1 157374893 5610767 complement(2107524..2108057) 1 NC_009831.1 KEGG: vfi:VFA0071 hypothetical protein; hypothetical protein 2108057 5610767 Ssed_1754 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473493.1 2107524 R 425104 CDS YP_001473494.1 157374894 5610768 2108253..2108831 1 NC_009831.1 KEGG: she:Shewmr4_1519 hypothetical protein; hypothetical protein 2108831 5610768 Ssed_1755 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473494.1 2108253 D 425104 CDS YP_001473495.1 157374895 5610647 2109325..2110869 1 NC_009831.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 2110869 pntA 5610647 pntA Shewanella sediminis HAW-EB3 NAD(P) transhydrogenase subunit alpha YP_001473495.1 2109325 D 425104 CDS YP_001473496.1 157374896 5610648 2110884..2112284 1 NC_009831.1 KEGG: son:SO3741 NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase 2112284 5610648 Ssed_1757 Shewanella sediminis HAW-EB3 NAD(P)(+) transhydrogenase YP_001473496.1 2110884 D 425104 CDS YP_001473497.1 157374897 5610649 complement(2112880..2113944) 1 NC_009831.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase 2113944 5610649 Ssed_1758 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP synthase YP_001473497.1 2112880 R 425104 CDS YP_001473498.1 157374898 5610650 complement(2114040..2114711) 1 NC_009831.1 KEGG: slo:Shew_2365 transcriptional regulator, GntR family; GntR family transcriptional regulator 2114711 5610650 Ssed_1759 Shewanella sediminis HAW-EB3 GntR family transcriptional regulator YP_001473498.1 2114040 R 425104 CDS YP_001473499.1 157374899 5610651 complement(2114840..2116405) 1 NC_009831.1 KEGG: slo:Shew_2364 aldehyde dehydrogenase; aldehyde dehydrogenase 2116405 5610651 Ssed_1760 Shewanella sediminis HAW-EB3 aldehyde dehydrogenase YP_001473499.1 2114840 R 425104 CDS YP_001473500.1 157374900 5610652 complement(2116462..2117463) 1 NC_009831.1 KEGG: slo:Shew_2363 proline racemase; hydroxyproline-2-epimerase 2117463 5610652 Ssed_1761 Shewanella sediminis HAW-EB3 hydroxyproline-2-epimerase YP_001473500.1 2116462 R 425104 CDS YP_001473501.1 157374901 5610653 complement(2117629..2118543) 1 NC_009831.1 KEGG: slo:Shew_2362 dihydrodipicolinate synthase; dihydrodipicolinate synthase 2118543 5610653 Ssed_1762 Shewanella sediminis HAW-EB3 dihydrodipicolinate synthase YP_001473501.1 2117629 R 425104 CDS YP_001473502.1 157374902 5612751 2118735..2119775 1 NC_009831.1 KEGG: slo:Shew_2361 proline racemase; proline racemase 2119775 5612751 Ssed_1763 Shewanella sediminis HAW-EB3 proline racemase YP_001473502.1 2118735 D 425104 CDS YP_001473503.1 157374903 5612752 2119955..2121223 1 NC_009831.1 KEGG: slo:Shew_2360 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 2121223 5612752 Ssed_1764 Shewanella sediminis HAW-EB3 D-amino-acid dehydrogenase YP_001473503.1 2119955 D 425104 CDS YP_001473504.1 157374904 5612753 2121662..2122435 1 NC_009831.1 KEGG: sdn:Sden_0896 methyltransferase type 11; type 11 methyltransferase 2122435 5612753 Ssed_1765 Shewanella sediminis HAW-EB3 type 11 methyltransferase YP_001473504.1 2121662 D 425104 CDS YP_001473505.1 157374905 5612754 2122993..2123328 1 NC_009831.1 hypothetical protein 2123328 5612754 Ssed_1766 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473505.1 2122993 D 425104 CDS YP_001473506.1 157374906 5613414 complement(2123590..2124633) 1 NC_009831.1 KEGG: bvi:Bcep1808_6281 hypothetical protein; hypothetical protein 2124633 5613414 Ssed_1767 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473506.1 2123590 R 425104 CDS YP_001473507.1 157374907 5613415 2124946..2125896 1 NC_009831.1 KEGG: sat:SYN_00385 hypothetical protein; meta-pathway phenol degradation-like protein 2125896 5613415 Ssed_1768 Shewanella sediminis HAW-EB3 meta-pathway phenol degradation-like protein YP_001473507.1 2124946 D 425104 CDS YP_001473508.1 157374908 5613416 2126621..2126836 1 NC_009831.1 KEGG: xcb:XC_0338 hypothetical protein; hypothetical protein 2126836 5613416 Ssed_1769 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473508.1 2126621 D 425104 CDS YP_001473509.1 157374909 5613417 complement(2126997..2128337) 1 NC_009831.1 KEGG: ppd:Ppro_2575 guanosine polyphosphate pyrophosphohydrolases/synthetases; guanosine polyphosphate pyrophosphohydrolase/synthetase 2128337 5613417 Ssed_1770 Shewanella sediminis HAW-EB3 guanosine polyphosphate pyrophosphohydrolase/synthetase YP_001473509.1 2126997 R 425104 CDS YP_001473510.1 157374910 5612229 complement(2128641..2130188) 1 NC_009831.1 KEGG: shm:Shewmr7_1436 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 2130188 5612229 Ssed_1771 Shewanella sediminis HAW-EB3 phospholipase D/transphosphatidylase YP_001473510.1 2128641 R 425104 CDS YP_001473511.1 157374911 5612230 complement(2130572..2131054) 1 NC_009831.1 KEGG: shw:Sputw3181_2859 transcriptional regulator, MarR family; MarR family transcriptional regulator 2131054 5612230 Ssed_1772 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001473511.1 2130572 R 425104 CDS YP_001473512.1 157374912 5612231 complement(2131299..2132516) 1 NC_009831.1 KEGG: pin:Ping_2076 transporter, BCCT family protein; transporter, BCCT family protein 2132516 5612231 Ssed_1773 Shewanella sediminis HAW-EB3 transporter, BCCT family protein YP_001473512.1 2131299 R 425104 CDS YP_001473513.1 157374913 5610697 2133324..2135177 1 NC_009831.1 KEGG: ppr:PBPRB1741 hypothetical carnitine O-acyltransferase; carnitine O-acetyltransferase 2135177 5610697 Ssed_1774 Shewanella sediminis HAW-EB3 carnitine O-acetyltransferase YP_001473513.1 2133324 D 425104 CDS YP_001473514.1 157374914 5610698 2135442..2135801 1 NC_009831.1 KEGG: cps:CPS_3947 hypothetical protein; hypothetical protein 2135801 5610698 Ssed_1775 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473514.1 2135442 D 425104 CDS YP_001473515.1 157374915 5610699 complement(2135947..2136798) 1 NC_009831.1 KEGG: sit:TM1040_3283 transcriptional regulator, LysR family; LysR family transcriptional regulator 2136798 5610699 Ssed_1776 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473515.1 2135947 R 425104 CDS YP_001473516.1 157374916 5610700 2136931..2137905 1 NC_009831.1 KEGG: sfr:Sfri_3680 alpha/beta hydrolase fold; alpha/beta hydrolase 2137905 5610700 Ssed_1777 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001473516.1 2136931 D 425104 CDS YP_001473517.1 157374917 5610811 2137935..2138543 1 NC_009831.1 KEGG: cps:CPS_2520 short chain dehydrogenase; short chain dehydrogenase 2138543 5610811 Ssed_1778 Shewanella sediminis HAW-EB3 short chain dehydrogenase YP_001473517.1 2137935 D 425104 CDS YP_001473518.1 157374918 5610812 complement(2138615..2139853) 1 NC_009831.1 KEGG: lpf:lpl0333 hypothetical protein; hypothetical protein 2139853 5610812 Ssed_1779 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473518.1 2138615 R 425104 CDS YP_001473519.1 157374919 5610813 2140151..2141728 1 NC_009831.1 KEGG: sfr:Sfri_2755 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 2141728 5610813 Ssed_1780 Shewanella sediminis HAW-EB3 response regulator receiver modulated metal dependent phosphohydrolase YP_001473519.1 2140151 D 425104 CDS YP_001473520.1 157374920 5610814 2141738..2143102 1 NC_009831.1 KEGG: saz:Sama_2082 signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein; signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein 2143102 5610814 Ssed_1781 Shewanella sediminis HAW-EB3 signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein YP_001473520.1 2141738 D 425104 CDS YP_001473521.1 157374921 5610662 complement(2143107..2144492) 1 NC_009831.1 KEGG: slo:Shew_2358 peptidase M24; peptidase M24 2144492 5610662 Ssed_1782 Shewanella sediminis HAW-EB3 peptidase M24 YP_001473521.1 2143107 R 425104 CDS YP_001473522.1 157374922 5610663 2144719..2145270 1 NC_009831.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 2145270 5610663 Ssed_1783 Shewanella sediminis HAW-EB3 D,D-heptose 1,7-bisphosphate phosphatase YP_001473522.1 2144719 D 425104 CDS YP_001473523.1 157374923 5611775 complement(2152549..2153244) 1 NC_009831.1 KEGG: slo:Shew_2355 hypothetical protein; hypothetical protein 2153244 5611775 Ssed_1784 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473523.1 2152549 R 425104 CDS YP_001473524.1 157374924 5610665 2153542..2153877 1 NC_009831.1 KEGG: slo:Shew_2354 hypothetical protein; hypothetical protein 2153877 5610665 Ssed_1785 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473524.1 2153542 D 425104 CDS YP_001473525.1 157374925 5613288 2154002..2154949 1 NC_009831.1 KEGG: sbl:Sbal_2505 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 2154949 5613288 Ssed_1786 Shewanella sediminis HAW-EB3 magnesium and cobalt transport protein CorA YP_001473525.1 2154002 D 425104 CDS YP_001473526.1 157374926 5613289 complement(2154944..2155258) 1 NC_009831.1 KEGG: slo:Shew_2352 hypothetical protein; hypothetical protein 2155258 5613289 Ssed_1787 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473526.1 2154944 R 425104 CDS YP_001473527.1 157374927 5613290 complement(2155417..2156682) 1 NC_009831.1 KEGG: slo:Shew_2351 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2156682 5613290 Ssed_1788 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001473527.1 2155417 R 425104 CDS YP_001473528.1 157374928 5613044 2156838..2157545 1 NC_009831.1 KEGG: saz:Sama_1540 conserved hypothetical protein; hypothetical protein 2157545 5613044 Ssed_1789 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473528.1 2156838 D 425104 CDS YP_001473529.1 157374929 5613045 complement(2157640..2158995) 1 NC_009831.1 KEGG: slo:Shew_2349 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2158995 5613045 Ssed_1790 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001473529.1 2157640 R 425104 CDS YP_001473530.1 157374930 5613046 complement(2159056..2159730) 1 NC_009831.1 KEGG: slo:Shew_2348 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2159730 5613046 Ssed_1791 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001473530.1 2159056 R 425104 CDS YP_001473531.1 157374931 5613047 2160005..2160859 1 NC_009831.1 KEGG: sfr:Sfri_2485 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 2160859 5613047 Ssed_1792 Shewanella sediminis HAW-EB3 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001473531.1 2160005 D 425104 CDS YP_001473532.1 157374932 5612837 2160876..2161571 1 NC_009831.1 KEGG: cps:CPS_3310 phosphonate ABC transporter, ATP-binding protein; phosphonate ABC transporter ATPase 2161571 5612837 Ssed_1793 Shewanella sediminis HAW-EB3 phosphonate ABC transporter ATPase YP_001473532.1 2160876 D 425104 CDS YP_001473533.1 157374933 5612838 2161564..2163096 1 NC_009831.1 KEGG: slo:Shew_2345 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2163096 5612838 Ssed_1794 Shewanella sediminis HAW-EB3 binding-protein-dependent transport system inner membrane protein YP_001473533.1 2161564 D 425104 CDS YP_001473534.1 157374934 5612839 complement(2163300..2163644) 1 NC_009831.1 KEGG: slo:Shew_2344 hypothetical protein; hypothetical protein 2163644 5612839 Ssed_1795 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473534.1 2163300 R 425104 CDS YP_001473535.1 157374935 5612840 complement(2163726..2164553) 1 NC_009831.1 KEGG: slo:Shew_2343 hypothetical protein; hypothetical protein 2164553 5612840 Ssed_1796 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473535.1 2163726 R 425104 CDS YP_001473536.1 157374936 5613226 2164932..2166524 1 NC_009831.1 KEGG: slo:Shew_2342 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2166524 5613226 Ssed_1797 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001473536.1 2164932 D 425104 CDS YP_001473537.1 157374937 5613227 2166521..2167873 1 NC_009831.1 KEGG: slo:Shew_2341 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 2167873 5613227 Ssed_1798 Shewanella sediminis HAW-EB3 two component, sigma54 specific, Fis family transcriptional regulator YP_001473537.1 2166521 D 425104 CDS YP_001473538.1 157374938 5613228 2168088..2169320 1 NC_009831.1 KEGG: pha:PSHAa2265 metal-dependent phosphohydrolase domain; metal dependent phosphohydrolase domain-containing protein 2169320 5613228 Ssed_1799 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase domain-containing protein YP_001473538.1 2168088 D 425104 CDS YP_001473539.1 157374939 5612780 complement(2169366..2170004) 1 NC_009831.1 KEGG: son:SO0765 threonine efflux protein; threonine efflux protein 2170004 5612780 Ssed_1800 Shewanella sediminis HAW-EB3 threonine efflux protein YP_001473539.1 2169366 R 425104 CDS YP_001473540.1 157374940 5612781 complement(2170111..2170947) 1 NC_009831.1 KEGG: slo:Shew_1463 transcriptional regulator, AraC family; AraC family transcriptional regulator 2170947 5612781 Ssed_1801 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001473540.1 2170111 R 425104 CDS YP_001473541.1 157374941 5612782 2171109..2171939 1 NC_009831.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2171939 nadE 5612782 nadE Shewanella sediminis HAW-EB3 NAD synthetase YP_001473541.1 2171109 D 425104 CDS YP_001473542.1 157374942 5612783 complement(2171985..2172464) 1 NC_009831.1 KEGG: spc:Sputcn32_2293 hypothetical protein; hypothetical protein 2172464 5612783 Ssed_1803 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473542.1 2171985 R 425104 CDS YP_001473543.1 157374943 5612714 2172578..2174047 1 NC_009831.1 KEGG: slo:Shew_1466 hypothetical protein; hypothetical protein 2174047 5612714 Ssed_1804 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473543.1 2172578 D 425104 CDS YP_001473544.1 157374944 5612715 complement(2174053..2176230) 1 NC_009831.1 KEGG: slo:Shew_1467 diguanylate cyclase; diguanylate cyclase 2176230 5612715 Ssed_1805 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473544.1 2174053 R 425104 CDS YP_001473545.1 157374945 5612716 complement(2176512..2177087) 1 NC_009831.1 Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P 2177087 5612716 Ssed_1806 Shewanella sediminis HAW-EB3 elongation factor P YP_001473545.1 2176512 R 425104 CDS YP_001473546.1 157374946 5612717 complement(2177214..2178809) 1 NC_009831.1 KEGG: vpa:VPA0467 ATP-binding component of ABC transporter; ABC transporter ATP-binding protein 2178809 5612717 Ssed_1807 Shewanella sediminis HAW-EB3 ABC transporter ATP-binding protein YP_001473546.1 2177214 R 425104 CDS YP_001473547.1 157374947 5611858 complement(2179647..2181431) 1 NC_009831.1 KEGG: she:Shewmr4_2219 sulfatase; sulfatase 2181431 5611858 Ssed_1808 Shewanella sediminis HAW-EB3 sulfatase YP_001473547.1 2179647 R 425104 CDS YP_001473548.1 157374948 5612563 complement(2181518..2181733) 1 NC_009831.1 KEGG: slo:Shew_1471 protein of unknown function DUF1414; hypothetical protein 2181733 5612563 Ssed_1809 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473548.1 2181518 R 425104 CDS YP_001473549.1 157374949 5612564 2182101..2183132 1 NC_009831.1 KEGG: slo:Shew_1472 37 kDa nucleoid-associated protein; nucleoid-associated protein NdpA 2183132 5612564 Ssed_1810 Shewanella sediminis HAW-EB3 nucleoid-associated protein NdpA YP_001473549.1 2182101 D 425104 CDS YP_001473550.1 157374950 5612565 2183497..2184378 1 NC_009831.1 KEGG: slo:Shew_1473 hypothetical protein; hypothetical protein 2184378 5612565 Ssed_1811 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473550.1 2183497 D 425104 CDS YP_001473551.1 157374951 5612520 2184417..2185265 1 NC_009831.1 KEGG: slo:Shew_1474 peptidase M23B; peptidase M23B 2185265 5612520 Ssed_1812 Shewanella sediminis HAW-EB3 peptidase M23B YP_001473551.1 2184417 D 425104 CDS YP_001473552.1 157374952 5612521 complement(2185390..2186199) 1 NC_009831.1 KEGG: dar:Daro_1186 phytochelatin synthase-like protein; phytochelatin synthase-like protein 2186199 5612521 Ssed_1813 Shewanella sediminis HAW-EB3 phytochelatin synthase-like protein YP_001473552.1 2185390 R 425104 CDS YP_001473553.1 157374953 5612522 2186356..2188437 1 NC_009831.1 KEGG: ppr:PBPRB1222 ferrichrome-iron receptor; ferrichrome-iron receptor 2188437 5612522 Ssed_1814 Shewanella sediminis HAW-EB3 ferrichrome-iron receptor YP_001473553.1 2186356 D 425104 CDS YP_001473554.1 157374954 5612478 2190542..2190952 1 NC_009831.1 KEGG: bce:BC3238 hypothetical protein; hypothetical protein 2190952 5612478 Ssed_1815 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473554.1 2190542 D 425104 CDS YP_001473555.1 157374955 5612479 complement(2191396..2192310) 1 NC_009831.1 KEGG: pvi:Cvib_1365 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2192310 5612479 Ssed_1816 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001473555.1 2191396 R 425104 CDS YP_001473556.1 157374956 5612480 complement(2192297..2193751) 1 NC_009831.1 KEGG: pvi:Cvib_1366 SSS sodium solute transporter superfamily; SSS family solute/sodium (Na+) symporter 2193751 5612480 Ssed_1817 Shewanella sediminis HAW-EB3 SSS family solute/sodium (Na+) symporter YP_001473556.1 2192297 R 425104 CDS YP_001473557.1 157374957 5612481 complement(2193754..2194947) 1 NC_009831.1 KEGG: rfr:Rfer_3891 protein of unknown function DUF160; lysine 2,3-aminomutase 2194947 5612481 Ssed_1818 Shewanella sediminis HAW-EB3 lysine 2,3-aminomutase YP_001473557.1 2193754 R 425104 CDS YP_001473558.1 157374958 5612538 complement(2195595..2196167) 1 NC_009831.1 KEGG: slo:Shew_1489 protein of unknown function DUF991; hypothetical protein 2196167 5612538 Ssed_1819 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473558.1 2195595 R 425104 CDS YP_001473559.1 157374959 5612539 complement(2196220..2196759) 1 NC_009831.1 KEGG: slo:Shew_1490 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2196759 5612539 Ssed_1820 Shewanella sediminis HAW-EB3 ErfK/YbiS/YcfS/YnhG family protein YP_001473559.1 2196220 R 425104 CDS YP_001473560.1 157374960 5612540 2196931..2197770 1 NC_009831.1 KEGG: she:Shewmr4_2209 ion transport protein; ion transport protein 2197770 5612540 Ssed_1821 Shewanella sediminis HAW-EB3 ion transport protein YP_001473560.1 2196931 D 425104 CDS YP_001473561.1 157374961 5612541 2198117..2199634 1 NC_009831.1 KEGG: slo:Shew_1492 MATE efflux family protein; MATE efflux family protein 2199634 5612541 Ssed_1822 Shewanella sediminis HAW-EB3 MATE efflux family protein YP_001473561.1 2198117 D 425104 CDS YP_001473562.1 157374962 5612472 complement(2199717..2199953) 1 NC_009831.1 KEGG: slo:Shew_1493 hypothetical protein; hypothetical protein 2199953 5612472 Ssed_1823 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473562.1 2199717 R 425104 CDS YP_001473563.1 157374963 5612473 2200129..2200446 1 NC_009831.1 KEGG: shw:Sputw3181_1730 uncharacterized conserved protein UCP029143; hypothetical protein 2200446 5612473 Ssed_1824 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473563.1 2200129 D 425104 CDS YP_001473564.1 157374964 5612474 complement(2200789..2201244) 1 NC_009831.1 KEGG: slo:Shew_1496 lipoprotein; lipoprotein 2201244 5612474 Ssed_1825 Shewanella sediminis HAW-EB3 lipoprotein YP_001473564.1 2200789 R 425104 CDS YP_001473565.1 157374965 5612399 2201603..2202337 1 NC_009831.1 KEGG: slo:Shew_1497 protein of unknown function DUF1538; hypothetical protein 2202337 5612399 Ssed_1826 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473565.1 2201603 D 425104 CDS YP_001473566.1 157374966 5612400 2202343..2203128 1 NC_009831.1 KEGG: slo:Shew_1498 protein of unknown function DUF1538; hypothetical protein 2203128 5612400 Ssed_1827 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473566.1 2202343 D 425104 CDS YP_001473567.1 157374967 5612401 2203118..2203468 1 NC_009831.1 KEGG: slo:Shew_1499 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2203468 5612401 Ssed_1828 Shewanella sediminis HAW-EB3 nitrogen regulatory protein P-II YP_001473567.1 2203118 D 425104 CDS YP_001473568.1 157374968 5612402 2203465..2203872 1 NC_009831.1 KEGG: slo:Shew_1500 signal transduction protein with CBS domains; signal transduction protein 2203872 5612402 Ssed_1829 Shewanella sediminis HAW-EB3 signal transduction protein YP_001473568.1 2203465 D 425104 CDS YP_001473569.1 157374969 5612367 complement(2203936..2204292) 1 NC_009831.1 KEGG: shm:Shewmr7_2487 glutaredoxin; glutaredoxin 2204292 5612367 Ssed_1830 Shewanella sediminis HAW-EB3 glutaredoxin YP_001473569.1 2203936 R 425104 CDS YP_001473570.1 157374970 5612368 complement(2204358..2207399) 1 NC_009831.1 KEGG: slo:Shew_1502 protein of unknown function DUF748; hypothetical protein 2207399 5612368 Ssed_1831 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473570.1 2204358 R 425104 CDS YP_001473571.1 157374971 5612369 2207554..2208573 1 NC_009831.1 KEGG: slo:Shew_1503 oxidoreductase FAD-binding domain protein; oxidoreductase FAD-binding subunit 2208573 5612369 Ssed_1832 Shewanella sediminis HAW-EB3 oxidoreductase FAD-binding subunit YP_001473571.1 2207554 D 425104 CDS YP_001473572.1 157374972 5612370 complement(2208574..2208981) 1 NC_009831.1 KEGG: sbl:Sbal_1690 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2208981 5612370 Ssed_1833 Shewanella sediminis HAW-EB3 glyoxalase/bleomycin resistance protein/dioxygenase YP_001473572.1 2208574 R 425104 CDS YP_001473573.1 157374973 5612273 2209195..2209590 1 NC_009831.1 KEGG: slo:Shew_1504 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2209590 5612273 Ssed_1834 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001473573.1 2209195 D 425104 CDS YP_001473574.1 157374974 5612274 2209616..2210356 1 NC_009831.1 KEGG: slo:Shew_1505 hypothetical protein; hypothetical protein 2210356 5612274 Ssed_1835 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473574.1 2209616 D 425104 CDS YP_001473575.1 157374975 5612275 2210450..2210800 1 NC_009831.1 KEGG: slo:Shew_1506 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2210800 5612275 Ssed_1836 Shewanella sediminis HAW-EB3 glyoxalase/bleomycin resistance protein/dioxygenase YP_001473575.1 2210450 D 425104 CDS YP_001473576.1 157374976 5612276 2210860..2211213 1 NC_009831.1 KEGG: slo:Shew_1507 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 2211213 5612276 Ssed_1837 Shewanella sediminis HAW-EB3 5-carboxymethyl-2-hydroxymuconate isomerase YP_001473576.1 2210860 D 425104 CDS YP_001473577.1 157374977 5612360 complement(2211309..2212970) 1 NC_009831.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 2212970 asnB 5612360 asnB Shewanella sediminis HAW-EB3 asparagine synthetase B YP_001473577.1 2211309 R 425104 CDS YP_001473578.1 157374978 5612361 complement(2213460..2215169) 1 NC_009831.1 KEGG: slo:Shew_1510 peptidase M28; peptidase M28 2215169 5612361 Ssed_1839 Shewanella sediminis HAW-EB3 peptidase M28 YP_001473578.1 2213460 R 425104 CDS YP_001473579.1 157374979 5612362 complement(2215839..2216585) 1 NC_009831.1 KEGG: slo:Shew_1511 HAD-superfamily hydrolase, subfamily IIA; UMP phosphatase 2216585 5612362 Ssed_1840 Shewanella sediminis HAW-EB3 UMP phosphatase YP_001473579.1 2215839 R 425104 CDS YP_001473580.1 157374980 5612027 complement(2216927..2218267) 1 NC_009831.1 KEGG: ppr:PBPRB1966 hypothetical protein; hypothetical protein 2218267 5612027 Ssed_1841 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473580.1 2216927 R 425104 CDS YP_001473581.1 157374981 5612028 complement(2218586..2219959) 1 NC_009831.1 KEGG: ppr:PBPRB1966 hypothetical protein; hypothetical protein 2219959 5612028 Ssed_1842 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473581.1 2218586 R 425104 CDS YP_001473582.1 157374982 5612029 complement(2220217..2220621) 1 NC_009831.1 hypothetical protein 2220621 5612029 Ssed_1843 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473582.1 2220217 R 425104 CDS YP_001473583.1 157374983 5612030 complement(2220845..2221489) 1 NC_009831.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 2221489 purN 5612030 purN Shewanella sediminis HAW-EB3 phosphoribosylglycinamide formyltransferase YP_001473583.1 2220845 R 425104 CDS YP_001473584.1 157374984 5611989 complement(2221489..2222526) 1 NC_009831.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2222526 5611989 Ssed_1845 Shewanella sediminis HAW-EB3 phosphoribosylaminoimidazole synthetase YP_001473584.1 2221489 R 425104 CDS YP_001473585.1 157374985 5611990 2222749..2223375 1 NC_009831.1 KEGG: shn:Shewana3_2544 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 2223375 5611990 Ssed_1846 Shewanella sediminis HAW-EB3 uracil phosphoribosyltransferase YP_001473585.1 2222749 D 425104 CDS YP_001473586.1 157374986 5611991 complement(2223502..2224821) 1 NC_009831.1 KEGG: slo:Shew_1515 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 2224821 5611991 Ssed_1847 Shewanella sediminis HAW-EB3 Na+/H+ antiporter NhaC YP_001473586.1 2223502 R 425104 CDS YP_001473587.1 157374987 5611992 2225132..2225737 1 NC_009831.1 KEGG: slo:Shew_1516 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 2225737 5611992 Ssed_1848 Shewanella sediminis HAW-EB3 alkyl hydroperoxide reductase YP_001473587.1 2225132 D 425104 CDS YP_001473588.1 157374988 5611867 2225953..2226474 1 NC_009831.1 KEGG: pin:Ping_2839 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 2226474 5611867 Ssed_1849 Shewanella sediminis HAW-EB3 prolyl-tRNA synthetase YP_001473588.1 2225953 D 425104 CDS YP_001473589.1 157374989 5611868 complement(2226589..2227260) 1 NC_009831.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2227260 5611868 Ssed_1850 Shewanella sediminis HAW-EB3 ribonuclease T YP_001473589.1 2226589 R 425104 CDS YP_001473590.1 157374990 5611869 2227378..2228271 1 NC_009831.1 KEGG: slo:Shew_1521 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2228271 5611869 Ssed_1851 Shewanella sediminis HAW-EB3 OmpA/MotB domain-containing protein YP_001473590.1 2227378 D 425104 CDS YP_001473591.1 157374991 5611922 2228909..2231065 1 NC_009831.1 KEGG: slo:Shew_1522 prolyl oligopeptidase; prolyl oligopeptidase 2231065 5611922 Ssed_1852 Shewanella sediminis HAW-EB3 prolyl oligopeptidase YP_001473591.1 2228909 D 425104 CDS YP_001473592.1 157374992 5611923 2231231..2231629 1 NC_009831.1 KEGG: sbl:Sbal_1742 4-hydroxybenzoyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 2231629 5611923 Ssed_1853 Shewanella sediminis HAW-EB3 4-hydroxybenzoyl-CoA thioesterase YP_001473592.1 2231231 D 425104 CDS YP_001473593.1 157374993 5611924 2231619..2232308 1 NC_009831.1 KEGG: slo:Shew_1524 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2232308 5611924 Ssed_1854 Shewanella sediminis HAW-EB3 MotA/TolQ/ExbB proton channel YP_001473593.1 2231619 D 425104 CDS YP_001473594.1 157374994 5611925 2232308..2232742 1 NC_009831.1 KEGG: slo:Shew_1525 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 2232742 5611925 Ssed_1855 Shewanella sediminis HAW-EB3 biopolymer transport protein ExbD/TolR YP_001473594.1 2232308 D 425104 CDS YP_001473595.1 157374995 5611712 2232746..2233705 1 NC_009831.1 KEGG: slo:Shew_1526 TolA family protein; TolA family protein 2233705 5611712 Ssed_1856 Shewanella sediminis HAW-EB3 TolA family protein YP_001473595.1 2232746 D 425104 CDS YP_001473596.1 157374996 5611713 2233716..2235044 1 NC_009831.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 2235044 tolB 5611713 tolB Shewanella sediminis HAW-EB3 translocation protein TolB YP_001473596.1 2233716 D 425104 CDS YP_001473597.1 157374997 5611714 2235078..2235617 1 NC_009831.1 KEGG: slo:Shew_1528 OmpA domain protein; OmpA domain-containing protein 2235617 5611714 Ssed_1858 Shewanella sediminis HAW-EB3 OmpA domain-containing protein YP_001473597.1 2235078 D 425104 CDS YP_001473598.1 157374998 5611715 2235638..2236366 1 NC_009831.1 KEGG: slo:Shew_1529 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2236366 5611715 Ssed_1859 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473598.1 2235638 D 425104 CDS YP_001473599.1 157374999 5612110 2239082..2240224 1 NC_009831.1 KEGG: slo:Shew_1530 porin; porin 2240224 5612110 Ssed_1860 Shewanella sediminis HAW-EB3 porin YP_001473599.1 2239082 D 425104 CDS YP_001473600.1 157375000 5611668 complement(2240334..2240603) 1 NC_009831.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 2240603 grxA 5611668 grxA Shewanella sediminis HAW-EB3 glutaredoxin YP_001473600.1 2240334 R 425104 CDS YP_001473601.1 157375001 5611669 complement(2240666..2242408) 1 NC_009831.1 KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 2242408 5611669 Ssed_1862 Shewanella sediminis HAW-EB3 type III restriction enzyme, res subunit YP_001473601.1 2240666 R 425104 CDS YP_001473602.1 157375002 5611670 complement(2242605..2244557) 1 NC_009831.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2244557 5611670 Ssed_1863 Shewanella sediminis HAW-EB3 acetyl-CoA synthetase YP_001473602.1 2242605 R 425104 CDS YP_001473603.1 157375003 5611611 2244679..2248158 1 NC_009831.1 KEGG: slo:Shew_1534 integral membrane sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 2248158 5611611 Ssed_1864 Shewanella sediminis HAW-EB3 integral membrane sensor hybrid histidine kinase YP_001473603.1 2244679 D 425104 CDS YP_001473604.1 157375004 5611612 2248171..2248782 1 NC_009831.1 KEGG: slo:Shew_1535 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 2248782 5611612 Ssed_1865 Shewanella sediminis HAW-EB3 fumarylacetoacetate (FAA) hydrolase YP_001473604.1 2248171 D 425104 CDS YP_001473605.1 157375005 5611613 2249079..2250368 1 NC_009831.1 KEGG: slo:Shew_1537 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2250368 5611613 Ssed_1866 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001473605.1 2249079 D 425104 CDS YP_001473606.1 157375006 5611638 complement(2250576..2251235) 1 NC_009831.1 KEGG: slo:Shew_1545 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2251235 5611638 Ssed_1867 Shewanella sediminis HAW-EB3 two component LuxR family transcriptional regulator YP_001473606.1 2250576 R 425104 CDS YP_001473607.1 157375007 5611639 complement(2251458..2251883) 1 NC_009831.1 KEGG: slo:Shew_1546 thioesterase superfamily protein; thioesterase superfamily protein 2251883 5611639 Ssed_1868 Shewanella sediminis HAW-EB3 thioesterase superfamily protein YP_001473607.1 2251458 R 425104 CDS YP_001473608.1 157375008 5611640 complement(2252145..2253209) 1 NC_009831.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 2253209 5611640 Ssed_1869 Shewanella sediminis HAW-EB3 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001473608.1 2252145 R 425104 CDS YP_001473609.1 157375009 5611641 complement(2253375..2254187) 1 NC_009831.1 KEGG: slo:Shew_1548 protein of unknown function DUF299; hypothetical protein 2254187 5611641 Ssed_1870 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473609.1 2253375 R 425104 CDS YP_001473610.1 157375010 5609725 2254314..2256686 1 NC_009831.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2256686 5609725 Ssed_1871 Shewanella sediminis HAW-EB3 phosphoenolpyruvate synthase YP_001473610.1 2254314 D 425104 CDS YP_001473611.1 157375011 5609726 2257426..2260485 1 NC_009831.1 KEGG: slo:Shew_1550 FAD linked oxidase domain protein; D-lactate dehydrogenase 2260485 5609726 Ssed_1872 Shewanella sediminis HAW-EB3 D-lactate dehydrogenase YP_001473611.1 2257426 D 425104 CDS YP_001473612.1 157375012 5609727 2260568..2261008 1 NC_009831.1 KEGG: spc:Sputcn32_2241 protein of unknown function DUF1285; hypothetical protein 2261008 5609727 Ssed_1873 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473612.1 2260568 D 425104 CDS YP_001473613.1 157375013 5609728 2261121..2261540 1 NC_009831.1 KEGG: shm:Shewmr7_1670 transcriptional regulator, MarR family; MarR family transcriptional regulator 2261540 5609728 Ssed_1874 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001473613.1 2261121 D 425104 CDS YP_001473614.1 157375014 5610906 2261611..2262015 1 NC_009831.1 KEGG: slo:Shew_1553 hypothetical protein; hypothetical protein 2262015 5610906 Ssed_1875 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473614.1 2261611 D 425104 CDS YP_001473615.1 157375015 5610907 complement(2262036..2262380) 1 NC_009831.1 KEGG: slo:Shew_1554 hypothetical protein; hypothetical protein 2262380 5610907 Ssed_1876 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473615.1 2262036 R 425104 CDS YP_001473616.1 157375016 5610908 complement(2262584..2263618) 1 NC_009831.1 KEGG: slo:Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 2263618 5610908 Ssed_1877 Shewanella sediminis HAW-EB3 Glu/Leu/Phe/Val dehydrogenase YP_001473616.1 2262584 R 425104 CDS YP_001473617.1 157375017 5610776 2263878..2264321 1 NC_009831.1 KEGG: slo:Shew_1556 hypothetical protein; hypothetical protein 2264321 5610776 Ssed_1878 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473617.1 2263878 D 425104 CDS YP_001473618.1 157375018 5610777 complement(2264540..2265907) 1 NC_009831.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2265907 5610777 Ssed_1879 Shewanella sediminis HAW-EB3 adenylosuccinate lyase YP_001473618.1 2264540 R 425104 CDS YP_001473619.1 157375019 5610778 complement(2265936..2266550) 1 NC_009831.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2266550 5610778 Ssed_1880 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473619.1 2265936 R 425104 CDS YP_001473620.1 157375020 5610779 complement(2266554..2267672) 1 NC_009831.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2267672 mnmA 5610779 mnmA Shewanella sediminis HAW-EB3 tRNA-specific 2-thiouridylase MnmA YP_001473620.1 2266554 R 425104 CDS YP_001473621.1 157375021 5613400 complement(2267919..2268629) 1 NC_009831.1 KEGG: she:Shewmr4_1605 pseudouridine synthase, Rsu; pseudouridine synthase 2268629 5613400 Ssed_1882 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001473621.1 2267919 R 425104 CDS YP_001473622.1 157375022 5613401 2269013..2271238 1 NC_009831.1 KEGG: shm:Shewmr7_1681 isocitrate dehydrogenase, NADP-dependent; isocitrate dehydrogenase (NADP(+)) 2271238 5613401 Ssed_1883 Shewanella sediminis HAW-EB3 isocitrate dehydrogenase (NADP(+)) YP_001473622.1 2269013 D 425104 CDS YP_001473623.1 157375023 5613402 complement(2271354..2271560) 1 NC_009831.1 KEGG: slo:Shew_1564 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2271560 5613402 Ssed_1884 Shewanella sediminis HAW-EB3 cold-shock DNA-binding domain-containing protein YP_001473623.1 2271354 R 425104 CDS YP_001473624.1 157375024 5613403 2271808..2272116 1 NC_009831.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 2272116 clpS 5613403 clpS Shewanella sediminis HAW-EB3 ATP-dependent Clp protease adaptor protein ClpS YP_001473624.1 2271808 D 425104 CDS YP_001473625.1 157375025 5610986 2272153..2274411 1 NC_009831.1 KEGG: slo:Shew_1566 ATP-dependent Clp protease, ATP-binding subunit ClpA; ATP-dependent Clp protease, ATP-binding subunit ClpA 2274411 5610986 Ssed_1886 Shewanella sediminis HAW-EB3 ATP-dependent Clp protease, ATP-binding subunit ClpA YP_001473625.1 2272153 D 425104 CDS YP_001473626.1 157375026 5610987 complement(2274522..2274740) 1 NC_009831.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2274740 infA 5610987 infA Shewanella sediminis HAW-EB3 translation initiation factor IF-1 YP_001473626.1 2274522 R 425104 CDS YP_001473627.1 157375027 5610988 complement(2274880..2275590) 1 NC_009831.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2275590 5610988 Ssed_1888 Shewanella sediminis HAW-EB3 arginyl-tRNA-protein transferase YP_001473627.1 2274880 R 425104 CDS YP_001473628.1 157375028 5610989 complement(2275580..2276290) 1 NC_009831.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2276290 aat 5610989 aat Shewanella sediminis HAW-EB3 leucyl/phenylalanyl-tRNA--protein transferase YP_001473628.1 2275580 R 425104 CDS YP_001473629.1 157375029 5611075 2276346..2276822 1 NC_009831.1 KEGG: she:Shewmr4_1652 17 kDa surface antigen; 17 kDa surface antigen 2276822 5611075 Ssed_1890 Shewanella sediminis HAW-EB3 17 kDa surface antigen YP_001473629.1 2276346 D 425104 CDS YP_001473630.1 157375030 5611076 complement(2276917..2277276) 1 NC_009831.1 KEGG: slo:Shew_1571 hypothetical protein; hypothetical protein 2277276 5611076 Ssed_1891 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473630.1 2276917 R 425104 CDS YP_001473631.1 157375031 5611077 2277854..2278606 1 NC_009831.1 KEGG: son:SO2621 conserved hypothetical protein TIGR00486; hypothetical protein 2278606 5611077 Ssed_1892 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473631.1 2277854 D 425104 CDS YP_001473632.1 157375032 5613835 complement(2278750..2279526) 1 NC_009831.1 KEGG: eba:ebA3750 transcriptional regulator; transcriptional regulator 2279526 5613835 Ssed_1893 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001473632.1 2278750 R 425104 CDS YP_001473633.1 157375033 5613836 2279633..2280844 1 NC_009831.1 KEGG: pha:PSHAa2409 permease; permease 2280844 5613836 Ssed_1894 Shewanella sediminis HAW-EB3 permease YP_001473633.1 2279633 D 425104 CDS YP_001473634.1 157375034 5613837 2281126..2281893 1 NC_009831.1 KEGG: slo:Shew_2702 hypothetical protein; hypothetical protein 2281893 5613837 Ssed_1895 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473634.1 2281126 D 425104 CDS YP_001473635.1 157375035 5613838 complement(2281988..2282200) 1 NC_009831.1 KEGG: pin:Ping_1936 hypothetical protein; hypothetical protein 2282200 5613838 Ssed_1896 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473635.1 2281988 R 425104 CDS YP_001473636.1 157375036 5611128 complement(2282402..2282569) 1 NC_009831.1 KEGG: slo:Shew_1754 hypothetical protein; hypothetical protein 2282569 5611128 Ssed_1897 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473636.1 2282402 R 425104 CDS YP_001473637.1 157375037 5611129 complement(2282656..2283003) 1 NC_009831.1 KEGG: shw:Sputw3181_2177 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 2283003 5611129 Ssed_1898 Shewanella sediminis HAW-EB3 hydrogenase nickel incorporation protein HypA YP_001473637.1 2282656 R 425104 CDS YP_001473638.1 157375038 5611130 complement(2283006..2284022) 1 NC_009831.1 KEGG: slo:Shew_1756 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2284022 5611130 Ssed_1899 Shewanella sediminis HAW-EB3 hydrogenase expression/formation protein HypE YP_001473638.1 2283006 R 425104 CDS YP_001473639.1 157375039 5611131 complement(2284025..2285140) 1 NC_009831.1 KEGG: sbl:Sbal_1881 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 2285140 5611131 Ssed_1900 Shewanella sediminis HAW-EB3 hydrogenase expression/formation protein HypD YP_001473639.1 2284025 R 425104 CDS YP_001473640.1 157375040 5610824 complement(2285145..2285384) 1 NC_009831.1 KEGG: slo:Shew_1758 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 2285384 5610824 Ssed_1901 Shewanella sediminis HAW-EB3 hydrogenase assembly chaperone HypC/HupF YP_001473640.1 2285145 R 425104 CDS YP_001473641.1 157375041 5610825 complement(2285387..2286145) 1 NC_009831.1 KEGG: shw:Sputw3181_2173 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 2286145 5610825 Ssed_1902 Shewanella sediminis HAW-EB3 hydrogenase nickel incorporation protein HypB YP_001473641.1 2285387 R 425104 CDS YP_001473642.1 157375042 5610826 complement(2286248..2288599) 1 NC_009831.1 KEGG: slo:Shew_1760 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2288599 5610826 Ssed_1903 Shewanella sediminis HAW-EB3 (NiFe) hydrogenase maturation protein HypF YP_001473642.1 2286248 R 425104 CDS YP_001473643.1 157375043 5610800 complement(2288603..2290330) 1 NC_009831.1 KEGG: slo:Shew_1761 hypothetical protein; hypothetical protein 2290330 5610800 Ssed_1904 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473643.1 2288603 R 425104 CDS YP_001473644.1 157375044 5610801 complement(2290317..2290874) 1 NC_009831.1 KEGG: slo:Shew_1762 hydrogenase expression/formation protein; hydrogenase expression/formation protein 2290874 5610801 Ssed_1905 Shewanella sediminis HAW-EB3 hydrogenase expression/formation protein YP_001473644.1 2290317 R 425104 CDS YP_001473645.1 157375045 5610802 complement(2291055..2291720) 1 NC_009831.1 KEGG: shw:Sputw3181_1922 Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 2291720 5610802 Ssed_1906 Shewanella sediminis HAW-EB3 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001473645.1 2291055 R 425104 CDS YP_001473646.1 157375046 5610803 complement(2291743..2293446) 1 NC_009831.1 KEGG: slo:Shew_1764 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 2293446 5610803 Ssed_1907 Shewanella sediminis HAW-EB3 nickel-dependent hydrogenase, large subunit YP_001473646.1 2291743 R 425104 CDS YP_001473647.1 157375047 5611156 complement(2293450..2294586) 1 NC_009831.1 KEGG: shm:Shewmr7_2155 hydrogenase (NiFe) small subunit HydA; hydrogen:quinone oxidoreductase 2294586 5611156 Ssed_1908 Shewanella sediminis HAW-EB3 hydrogen:quinone oxidoreductase YP_001473647.1 2293450 R 425104 CDS YP_001473648.1 157375048 5611157 2295037..2295453 1 NC_009831.1 KEGG: shm:Shewmr7_2139 signal transduction protein with CBS domains; signal transduction protein 2295453 5611157 Ssed_1909 Shewanella sediminis HAW-EB3 signal transduction protein YP_001473648.1 2295037 D 425104 CDS YP_001473649.1 157375049 5611158 2295871..2296641 1 NC_009831.1 KEGG: hch:HCH_06608 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic protein 2296641 5611158 Ssed_1910 Shewanella sediminis HAW-EB3 amino acid ABC transporter periplasmic protein YP_001473649.1 2295871 D 425104 CDS YP_001473650.1 157375050 5611159 2297022..2300897 1 NC_009831.1 KEGG: slo:Shew_1767 ATP-dependent helicase HrpA; ATP-dependent helicase HrpA 2300897 5611159 Ssed_1911 Shewanella sediminis HAW-EB3 ATP-dependent helicase HrpA YP_001473650.1 2297022 D 425104 CDS YP_001473651.1 157375051 5611067 2301545..2301850 1 NC_009831.1 KEGG: vvy:VVA1191 NapD protein; NapD protein 2301850 5611067 Ssed_1912 Shewanella sediminis HAW-EB3 NapD protein YP_001473651.1 2301545 D 425104 CDS YP_001473652.1 157375052 5611068 2301847..2304336 1 NC_009831.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 2304336 5611068 Ssed_1913 Shewanella sediminis HAW-EB3 nitrate reductase catalytic subunit YP_001473652.1 2301847 D 425104 CDS YP_001473653.1 157375053 5611069 2304349..2304801 1 NC_009831.1 KEGG: vco:VC0395_0618 periplasmic nitrate reductase, cytochrome c-type protein; periplasmic nitrate reductase, cytochrome c-type protein 2304801 5611069 Ssed_1914 Shewanella sediminis HAW-EB3 periplasmic nitrate reductase, cytochrome c-type protein YP_001473653.1 2304349 D 425104 CDS YP_001473654.1 157375054 5611070 2304822..2305412 1 NC_009831.1 KEGG: vvy:VVA1194 periplasmic nitrate reductase, cytochrome c-type protein; periplasmic nitrate reductase, cytochrome c-type protein 2305412 5611070 Ssed_1915 Shewanella sediminis HAW-EB3 periplasmic nitrate reductase, cytochrome c-type protein YP_001473654.1 2304822 D 425104 CDS YP_001473655.1 157375055 5610678 2305422..2305550 1 NC_009831.1 KEGG: vvy:VVA1195 hypothetical protein; hypothetical protein 2305550 5610678 Ssed_1916 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473655.1 2305422 D 425104 CDS YP_001473656.1 157375056 5610679 complement(2305683..2306615) 1 NC_009831.1 KEGG: slo:Shew_1773 transcriptional regulator, LysR family; LysR family transcriptional regulator 2306615 5610679 Ssed_1917 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473656.1 2305683 R 425104 CDS YP_001473657.1 157375057 5610680 2306880..2308601 1 NC_009831.1 KEGG: hch:HCH_04204 ABC-type sugar transport system, periplasmic component; sugar ABC transporter periplasmic protein 2308601 5610680 Ssed_1918 Shewanella sediminis HAW-EB3 sugar ABC transporter periplasmic protein YP_001473657.1 2306880 D 425104 CDS YP_001473658.1 157375058 5612907 2308588..2309331 1 NC_009831.1 KEGG: hch:HCH_01467 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic protein 2309331 5612907 Ssed_1919 Shewanella sediminis HAW-EB3 amino acid ABC transporter periplasmic protein YP_001473658.1 2308588 D 425104 CDS YP_001473659.1 157375059 5612908 complement(2309461..2310462) 1 NC_009831.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 2310462 ddl 5612908 ddl Shewanella sediminis HAW-EB3 D-alanyl-alanine synthetase A YP_001473659.1 2309461 R 425104 CDS YP_001473660.1 157375060 5612909 2310695..2311162 1 NC_009831.1 KEGG: shm:Shewmr7_0516 transcriptional regulator, MarR family; MarR family transcriptional regulator 2311162 5612909 Ssed_1921 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001473660.1 2310695 D 425104 CDS YP_001473661.1 157375061 5612910 2311193..2312251 1 NC_009831.1 KEGG: vpa:VPA1218 secretion protein; secretion protein 2312251 5612910 Ssed_1922 Shewanella sediminis HAW-EB3 secretion protein YP_001473661.1 2311193 D 425104 CDS YP_001473662.1 157375062 5611214 2312465..2313538 1 NC_009831.1 KEGG: aha:AHA_1238 hypothetical protein; hypothetical protein 2313538 5611214 Ssed_1923 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473662.1 2312465 D 425104 CDS YP_001473663.1 157375063 5611215 complement(2313621..2314289) 1 NC_009831.1 KEGG: son:SO4298 cyclic nucleotide binding protein; cyclic nucleotide binding protein 2314289 5611215 Ssed_1924 Shewanella sediminis HAW-EB3 cyclic nucleotide binding protein YP_001473663.1 2313621 R 425104 CDS YP_001473664.1 157375064 5611216 2314499..2315206 1 NC_009831.1 KEGG: vpa:VPA1475 purine nucleoside phosphorylase; purine nucleoside phosphorylase 2315206 5611216 Ssed_1925 Shewanella sediminis HAW-EB3 purine nucleoside phosphorylase YP_001473664.1 2314499 D 425104 CDS YP_001473665.1 157375065 5611217 complement(2315363..2317069) 1 NC_009831.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 2317069 ushA 5611217 ushA Shewanella sediminis HAW-EB3 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_001473665.1 2315363 R 425104 CDS YP_001473666.1 157375066 5611103 2317502..2317921 1 NC_009831.1 hypothetical protein 2317921 5611103 Ssed_1927 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473666.1 2317502 D 425104 CDS YP_001473667.1 157375067 5611104 2318118..2318825 1 NC_009831.1 KEGG: pin:Ping_1348 hypothetical protein; hypothetical protein 2318825 5611104 Ssed_1928 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473667.1 2318118 D 425104 CDS YP_001473668.1 157375068 5611105 2318938..2319639 1 NC_009831.1 KEGG: spc:Sputcn32_3993 hypothetical protein; hypothetical protein 2319639 5611105 Ssed_1929 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473668.1 2318938 D 425104 CDS YP_001473669.1 157375069 5611260 2319830..2320132 1 NC_009831.1 KEGG: cps:CPS_2552 hypothetical protein; hypothetical protein 2320132 5611260 Ssed_1930 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473669.1 2319830 D 425104 CDS YP_001473670.1 157375070 5611261 complement(2320237..2320578) 1 NC_009831.1 KEGG: cbo:CBO0433 hydrogenase nickel incorporation protein; hydrogenase nickel incorporation protein 2320578 5611261 Ssed_1931 Shewanella sediminis HAW-EB3 hydrogenase nickel incorporation protein YP_001473670.1 2320237 R 425104 CDS YP_001473671.1 157375071 5611262 complement(2320657..2323344) 1 NC_009831.1 KEGG: cbo:CBO0432 pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase 2323344 5611262 Ssed_1932 Shewanella sediminis HAW-EB3 pyridine nucleotide-disulfide oxidoreductase YP_001473671.1 2320657 R 425104 CDS YP_001473672.1 157375072 5611263 complement(2323457..2324128) 1 NC_009831.1 KEGG: cbo:CBO0431 hydrogenase nickel incorporation protein; hydrogenase nickel incorporation protein 2324128 5611263 Ssed_1933 Shewanella sediminis HAW-EB3 hydrogenase nickel incorporation protein YP_001473672.1 2323457 R 425104 CDS YP_001473673.1 157375073 5611321 2324596..2326500 1 NC_009831.1 KEGG: ppr:PBPRB0486 hypothetical protein; hypothetical protein 2326500 5611321 Ssed_1934 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473673.1 2324596 D 425104 CDS YP_001473674.1 157375074 5611322 complement(2326656..2328707) 1 NC_009831.1 KEGG: slo:Shew_2131 exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V 2328707 5611322 Ssed_1935 Shewanella sediminis HAW-EB3 exodeoxyribonuclease V YP_001473674.1 2326656 R 425104 CDS YP_001473675.1 157375075 5611323 complement(2328704..2332459) 1 NC_009831.1 KEGG: slo:Shew_2130 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 2332459 5611323 Ssed_1936 Shewanella sediminis HAW-EB3 exodeoxyribonuclease V subunit beta YP_001473675.1 2328704 R 425104 CDS YP_001473676.1 157375076 5611324 complement(2332461..2336024) 1 NC_009831.1 KEGG: slo:Shew_2129 exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 2336024 5611324 Ssed_1937 Shewanella sediminis HAW-EB3 exodeoxyribonuclease V subunit gamma YP_001473676.1 2332461 R 425104 CDS YP_001473677.1 157375077 5610331 2336643..2337917 1 NC_009831.1 KEGG: hch:HCH_03999 nitrate/nitrite transporter; nitrate/nitrite transporter 2337917 5610331 Ssed_1938 Shewanella sediminis HAW-EB3 nitrate/nitrite transporter YP_001473677.1 2336643 D 425104 CDS YP_001473678.1 157375078 5610332 complement(2338069..2338389) 1 NC_009831.1 KEGG: shn:Shewana3_1142 hypothetical protein; hypothetical protein 2338389 5610332 Ssed_1939 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473678.1 2338069 R 425104 CDS YP_001473679.1 157375079 5610333 2339033..2340037 1 NC_009831.1 KEGG: shn:Shewana3_0877 sugar-binding protein; sugar-binding protein 2340037 5610333 Ssed_1940 Shewanella sediminis HAW-EB3 sugar-binding protein YP_001473679.1 2339033 D 425104 CDS YP_001473680.1 157375080 5610334 2341000..2342286 1 NC_009831.1 KEGG: sfr:Sfri_3838 hypothetical protein; hypothetical protein 2342286 5610334 Ssed_1941 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473680.1 2341000 D 425104 CDS YP_001473681.1 157375081 5611370 2342318..2344330 1 NC_009831.1 KEGG: sfr:Sfri_3839 peptidase S15; peptidase S15 2344330 5611370 Ssed_1942 Shewanella sediminis HAW-EB3 peptidase S15 YP_001473681.1 2342318 D 425104 CDS YP_001473682.1 157375082 5611371 2345093..2345488 1 NC_009831.1 KEGG: asa:ASA_P4G164 transposase; transposase 2345488 5611371 Ssed_1943 Shewanella sediminis HAW-EB3 transposase YP_001473682.1 2345093 D 425104 CDS YP_001473683.1 157375083 5611294 2347133..2347708 1 NC_009831.1 KEGG: vvy:VVA0641 cytochrome c553; cytochrome c553 2347708 5611294 Ssed_1946 Shewanella sediminis HAW-EB3 cytochrome c553 YP_001473683.1 2347133 D 425104 CDS YP_001473684.1 157375084 5611295 2347716..2348294 1 NC_009831.1 KEGG: vvu:VV2_0131 nitrate/TMAO reductase; nitrate/TMAO reductase 2348294 5611295 Ssed_1947 Shewanella sediminis HAW-EB3 nitrate/TMAO reductase YP_001473684.1 2347716 D 425104 CDS YP_001473685.1 157375085 5611296 2349116..2350096 1 NC_009831.1 KEGG: sdn:Sden_3680 protein of unknown function DUF1568; hypothetical protein 2350096 5611296 Ssed_1948 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473685.1 2349116 D 425104 CDS YP_001473686.1 157375086 5611297 complement(2351145..2352920) 1 NC_009831.1 KEGG: tdn:Tmden_0239 protein of unknown function DUF87; hypothetical protein 2352920 5611297 Ssed_1949 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473686.1 2351145 R 425104 CDS YP_001473687.1 157375087 5610342 complement(2352917..2353855) 1 NC_009831.1 KEGG: tdn:Tmden_0238 hypothetical protein; hypothetical protein 2353855 5610342 Ssed_1950 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473687.1 2352917 R 425104 CDS YP_001473688.1 157375088 5610343 complement(2354966..2355607) 1 NC_009831.1 KEGG: pau:PA14_13730 nitrate/nitrite response regulator; NarL; nitrate/nitrite response regulator; NarL 2355607 5610343 Ssed_1951 Shewanella sediminis HAW-EB3 nitrate/nitrite response regulator; NarL YP_001473688.1 2354966 R 425104 CDS YP_001473689.1 157375089 5610344 complement(2355702..2357477) 1 NC_009831.1 KEGG: psa:PST_0892 two-component sensor NarX; two-component sensor NarX 2357477 5610344 Ssed_1952 Shewanella sediminis HAW-EB3 two-component sensor NarX YP_001473689.1 2355702 R 425104 CDS YP_001473690.1 157375090 5610345 2357847..2359451 1 NC_009831.1 KEGG: hch:HCH_04020 nitrate/nitrite transporter; nitrate/nitrite transporter 2359451 5610345 Ssed_1953 Shewanella sediminis HAW-EB3 nitrate/nitrite transporter YP_001473690.1 2357847 D 425104 CDS YP_001473691.1 157375091 5614020 2359595..2363359 1 NC_009831.1 KEGG: psa:PST_0896 respiratory nitrate reductase alpha chain; respiratory nitrate reductase subunit alpha 2363359 5614020 Ssed_1954 Shewanella sediminis HAW-EB3 respiratory nitrate reductase subunit alpha YP_001473691.1 2359595 D 425104 CDS YP_001473692.1 157375092 5614021 2363372..2364910 1 NC_009831.1 KEGG: pau:PA14_13800 respiratory nitrate reductase beta subuni; respiratory nitrate reductase beta subuni 2364910 5614021 Ssed_1955 Shewanella sediminis HAW-EB3 respiratory nitrate reductase beta subuni YP_001473692.1 2363372 D 425104 CDS YP_001473693.1 157375093 5614022 2364914..2365648 1 NC_009831.1 KEGG: maq:Maqu_3084 nitrate reductase molybdenum cofactor assembly chaperone; nitrate reductase molybdenum cofactor assembly chaperone 2365648 5614022 Ssed_1956 Shewanella sediminis HAW-EB3 nitrate reductase molybdenum cofactor assembly chaperone YP_001473693.1 2364914 D 425104 CDS YP_001473694.1 157375094 5610597 2365659..2366336 1 NC_009831.1 KEGG: psa:PST_0899 respiratory nitrate reductase gamma chain; nitrate reductase 2366336 5610597 Ssed_1957 Shewanella sediminis HAW-EB3 nitrate reductase YP_001473694.1 2365659 D 425104 CDS YP_001473695.1 157375095 5610598 2366676..2367488 1 NC_009831.1 KEGG: psa:PST_0900 probable peptidyl-prolyl cis-trans isomerase, PpiC-type; peptidyl-prolyl cis-trans isomerase, PpiC-type 2367488 5610598 Ssed_1958 Shewanella sediminis HAW-EB3 peptidyl-prolyl cis-trans isomerase, PpiC-type YP_001473695.1 2366676 D 425104 CDS YP_001473696.1 157375096 5610599 2367649..2367978 1 NC_009831.1 hypothetical protein 2367978 5610599 Ssed_1959 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473696.1 2367649 D 425104 CDS YP_001473697.1 157375097 5610600 complement(2368129..2368671) 1 NC_009831.1 KEGG: tcx:Tcr_1929 HPP; hypothetical protein 2368671 5610600 Ssed_1960 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473697.1 2368129 R 425104 CDS YP_001473698.1 157375098 5611535 complement(2368798..2369061) 1 NC_009831.1 KEGG: vfi:VF1659 hypothetical protein; hypothetical protein 2369061 5611535 Ssed_1961 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473698.1 2368798 R 425104 CDS YP_001473699.1 157375099 5611536 complement(2369222..2369617) 1 NC_009831.1 KEGG: har:HEAR1663 hypothetical protein; hypothetical protein 2369617 5611536 Ssed_1962 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473699.1 2369222 R 425104 CDS YP_001473700.1 157375100 5611537 complement(2369778..2371508) 1 NC_009831.1 KEGG: hch:HCH_04002 serine/threonine protein kinase; serine/threonine protein kinase 2371508 5611537 Ssed_1963 Shewanella sediminis HAW-EB3 serine/threonine protein kinase YP_001473700.1 2369778 R 425104 CDS YP_001473701.1 157375101 5611538 complement(2371589..2373064) 1 NC_009831.1 KEGG: hch:HCH_04000 nitrate/nitrite transporter; nitrate/nitrite transporter 2373064 5611538 Ssed_1964 Shewanella sediminis HAW-EB3 nitrate/nitrite transporter YP_001473701.1 2371589 R 425104 CDS YP_001473702.1 157375102 5611456 complement(2373615..2375639) 1 NC_009831.1 KEGG: slo:Shew_2128 transglutaminase domain protein; transglutaminase domain-containing protein 2375639 5611456 Ssed_1965 Shewanella sediminis HAW-EB3 transglutaminase domain-containing protein YP_001473702.1 2373615 R 425104 CDS YP_001473703.1 157375103 5611457 complement(2375636..2376625) 1 NC_009831.1 KEGG: slo:Shew_2127 protein of unknown function DUF58; hypothetical protein 2376625 5611457 Ssed_1966 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473703.1 2375636 R 425104 CDS YP_001473704.1 157375104 5611458 complement(2376641..2377552) 1 NC_009831.1 KEGG: slo:Shew_2126 ATPase associated with various cellular activities, AAA_3; ATPase 2377552 5611458 Ssed_1967 Shewanella sediminis HAW-EB3 ATPase YP_001473704.1 2376641 R 425104 CDS YP_001473705.1 157375105 5611459 complement(2377699..2378394) 1 NC_009831.1 KEGG: shm:Shewmr7_1862 diguanylate phosphodiesterase; diguanylate phosphodiesterase 2378394 5611459 Ssed_1968 Shewanella sediminis HAW-EB3 diguanylate phosphodiesterase YP_001473705.1 2377699 R 425104 CDS YP_001473706.1 157375106 5612247 2379071..2379772 1 NC_009831.1 hypothetical protein 2379772 5612247 Ssed_1969 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473706.1 2379071 D 425104 CDS YP_001473707.1 157375107 5612248 2379921..2381882 1 NC_009831.1 hypothetical protein 2381882 5612248 Ssed_1970 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473707.1 2379921 D 425104 CDS YP_001473708.1 157375108 5612249 complement(2382140..2382952) 1 NC_009831.1 KEGG: lpf:lpl0800 hypothetical protein; hypothetical protein 2382952 5612249 Ssed_1971 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473708.1 2382140 R 425104 CDS YP_001473709.1 157375109 5612485 complement(2382985..2383251) 1 NC_009831.1 KEGG: lpp:lpp0199 hypothetical protein; hypothetical protein 2383251 5612485 Ssed_1972 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473709.1 2382985 R 425104 CDS YP_001473710.1 157375110 5612486 complement(2383623..2384891) 1 NC_009831.1 KEGG: pat:Patl_2252 histidine kinase; histidine kinase 2384891 5612486 Ssed_1973 Shewanella sediminis HAW-EB3 histidine kinase YP_001473710.1 2383623 R 425104 CDS YP_001473711.1 157375111 5612487 complement(2384888..2385559) 1 NC_009831.1 KEGG: sfr:Sfri_3676 two component transcriptional regulator, winged helix family protein; two component transcriptional regulator, winged helix family protein 2385559 5612487 Ssed_1974 Shewanella sediminis HAW-EB3 two component transcriptional regulator, winged helix family protein YP_001473711.1 2384888 R 425104 CDS YP_001473712.1 157375112 5612488 complement(2385553..2388741) 1 NC_009831.1 KEGG: pat:Patl_3597 acriflavin resistance protein; acriflavin resistance protein 2388741 5612488 Ssed_1975 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001473712.1 2385553 R 425104 CDS YP_001473713.1 157375113 5611873 complement(2388741..2389979) 1 NC_009831.1 KEGG: sfr:Sfri_3678 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2389979 5611873 Ssed_1976 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001473713.1 2388741 R 425104 CDS YP_001473714.1 157375114 5611874 complement(2389976..2391373) 1 NC_009831.1 KEGG: sfr:Sfri_3679 RND efflux system, outer membrane lipoprotein, NodT family protein; RND efflux system, outer membrane lipoprotein, NodT family protein 2391373 5611874 Ssed_1977 Shewanella sediminis HAW-EB3 RND efflux system, outer membrane lipoprotein, NodT family protein YP_001473714.1 2389976 R 425104 CDS YP_001473715.1 157375115 5611875 complement(2391644..2391958) 1 NC_009831.1 KEGG: sbl:Sbal_1230 hypothetical protein; hypothetical protein 2391958 5611875 Ssed_1978 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473715.1 2391644 R 425104 CDS YP_001473716.1 157375116 5611876 complement(2392308..2394257) 1 NC_009831.1 KEGG: slo:Shew_2125 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic 2394257 5611876 Ssed_1979 Shewanella sediminis HAW-EB3 lytic transglycosylase, catalytic YP_001473716.1 2392308 R 425104 CDS YP_001473717.1 157375117 5612689 complement(2394344..2395891) 1 NC_009831.1 KEGG: shm:Shewmr7_1864 protein of unknown function DUF195; hypothetical protein 2395891 5612689 Ssed_1980 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473717.1 2394344 R 425104 CDS YP_001473718.1 157375118 5612690 2396144..2397166 1 NC_009831.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 2397166 5612690 Ssed_1981 Shewanella sediminis HAW-EB3 sulfite oxidase subunit YedY YP_001473718.1 2396144 D 425104 CDS YP_001473719.1 157375119 5612691 2397180..2397809 1 NC_009831.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 2397809 5612691 Ssed_1982 Shewanella sediminis HAW-EB3 sulfite oxidase subunit YedZ YP_001473719.1 2397180 D 425104 CDS YP_001473720.1 157375120 5612797 2397997..2399643 1 NC_009831.1 KEGG: slo:Shew_2119 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2399643 5612797 Ssed_1983 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001473720.1 2397997 D 425104 CDS YP_001473721.1 157375121 5612798 2399804..2400298 1 NC_009831.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 2400298 5612798 Ssed_1984 Shewanella sediminis HAW-EB3 ribonuclease activity regulator protein RraA YP_001473721.1 2399804 D 425104 CDS YP_001473722.1 157375122 5612799 2400317..2402152 1 NC_009831.1 KEGG: sbl:Sbal_1993 AsmA family protein; AsmA family protein 2402152 5612799 Ssed_1985 Shewanella sediminis HAW-EB3 AsmA family protein YP_001473722.1 2400317 D 425104 CDS YP_001473723.1 157375123 5612800 2402152..2402739 1 NC_009831.1 KEGG: sbl:Sbal_1994 intracellular proteinase inhibitor domain protein; intracellular proteinase inhibitor domain-containing protein 2402739 5612800 Ssed_1986 Shewanella sediminis HAW-EB3 intracellular proteinase inhibitor domain-containing protein YP_001473723.1 2402152 D 425104 CDS YP_001473724.1 157375124 5612820 complement(2402906..2404462) 1 NC_009831.1 KEGG: sfr:Sfri_3219 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor 2404462 5612820 Ssed_1987 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor YP_001473724.1 2402906 R 425104 CDS YP_001473725.1 157375125 5612821 complement(2404695..2406254) 1 NC_009831.1 KEGG: slo:Shew_2115 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic 2406254 5612821 Ssed_1988 Shewanella sediminis HAW-EB3 lytic transglycosylase, catalytic YP_001473725.1 2404695 R 425104 CDS YP_001473726.1 157375126 5612822 complement(2406343..2407161) 1 NC_009831.1 KEGG: slo:Shew_2114 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 2407161 5612822 Ssed_1989 Shewanella sediminis HAW-EB3 hydroxyacylglutathione hydrolase YP_001473726.1 2406343 R 425104 CDS YP_001473727.1 157375127 5612823 2407343..2408077 1 NC_009831.1 KEGG: slo:Shew_2113 hypothetical protein; hypothetical protein 2408077 5612823 Ssed_1990 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473727.1 2407343 D 425104 CDS YP_001473728.1 157375128 5613369 2408187..2409083 1 NC_009831.1 KEGG: shw:Sputw3181_2247 transcriptional regulator, LysR family; LysR family transcriptional regulator 2409083 5613369 Ssed_1991 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473728.1 2408187 D 425104 CDS YP_001473729.1 157375129 5613370 complement(2409189..2409659) 1 NC_009831.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2409659 rnhA 5613370 rnhA Shewanella sediminis HAW-EB3 ribonuclease H YP_001473729.1 2409189 R 425104 CDS YP_001473730.1 157375130 5613371 2409727..2410455 1 NC_009831.1 KEGG: slo:Shew_2111 DNA polymerase III, epsilon subunit; DNA-directed DNA polymerase 2410455 5613371 Ssed_1993 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001473730.1 2409727 D 425104 CDS YP_001473731.1 157375131 5613372 2410466..2411782 1 NC_009831.1 KEGG: slo:Shew_2110 hypothetical protein; hypothetical protein 2411782 5613372 Ssed_1994 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473731.1 2410466 D 425104 CDS YP_001473732.1 157375132 5612434 complement(2413006..2413830) 1 NC_009831.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 2413830 5612434 Ssed_1995 Shewanella sediminis HAW-EB3 purine nucleoside phosphorylase YP_001473732.1 2413006 R 425104 CDS YP_001473733.1 157375133 5612846 2413963..2414892 1 NC_009831.1 KEGG: aha:AHA_0957 HTH-type transcriptional regulator XapR; HTH-type transcriptional regulator XapR 2414892 5612846 Ssed_1996 Shewanella sediminis HAW-EB3 HTH-type transcriptional regulator XapR YP_001473733.1 2413963 D 425104 CDS YP_001473734.1 157375134 5612847 complement(2414974..2416587) 1 NC_009831.1 KEGG: pat:Patl_0405 peptidase M28; peptidase M28 2416587 5612847 Ssed_1997 Shewanella sediminis HAW-EB3 peptidase M28 YP_001473734.1 2414974 R 425104 CDS YP_001473735.1 157375135 5613580 2416856..2418706 1 NC_009831.1 KEGG: sdn:Sden_1732 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2418706 5613580 Ssed_1998 Shewanella sediminis HAW-EB3 sodium/hydrogen exchanger YP_001473735.1 2416856 D 425104 CDS YP_001473736.1 157375136 5613581 complement(2418841..2421288) 1 NC_009831.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2421288 fadE 5613581 fadE Shewanella sediminis HAW-EB3 acyl-CoA dehydrogenase YP_001473736.1 2418841 R 425104 CDS YP_001473737.1 157375137 5613582 2421529..2422308 1 NC_009831.1 KEGG: slo:Shew_2107 glutamine amidotransferase, class-II; glutamine amidotransferase, class-II 2422308 5613582 Ssed_2000 Shewanella sediminis HAW-EB3 glutamine amidotransferase, class-II YP_001473737.1 2421529 D 425104 CDS YP_001473738.1 157375138 5613583 2422346..2422588 1 NC_009831.1 hypothetical protein 2422588 5613583 Ssed_2001 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473738.1 2422346 D 425104 CDS YP_001473739.1 157375139 5611460 complement(2422678..2423445) 1 NC_009831.1 KEGG: slo:Shew_2106 hypothetical protein; hypothetical protein 2423445 5611460 Ssed_2002 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473739.1 2422678 R 425104 CDS YP_001473740.1 157375140 5611461 complement(2423649..2424029) 1 NC_009831.1 KEGG: spc:Sputcn32_1794 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2424029 5611461 Ssed_2003 Shewanella sediminis HAW-EB3 methylated-DNA--protein-cysteine methyltransferase YP_001473740.1 2423649 R 425104 CDS YP_001473741.1 157375141 5611462 2424216..2424902 1 NC_009831.1 hypothetical protein 2424902 5611462 Ssed_2004 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473741.1 2424216 D 425104 CDS YP_001473742.1 157375142 5611463 complement(2424950..2426671) 1 NC_009831.1 KEGG: slo:Shew_2104 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2426671 5611463 Ssed_2005 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001473742.1 2424950 R 425104 CDS YP_001473743.1 157375143 5612152 2426911..2427402 1 NC_009831.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2427402 def 5612152 def Shewanella sediminis HAW-EB3 peptide deformylase YP_001473743.1 2426911 D 425104 CDS YP_001473744.1 157375144 5612153 complement(2427516..2428931) 1 NC_009831.1 KEGG: saz:Sama_1866 two-component system sensor kinase; two-component system sensor kinase 2428931 5612153 Ssed_2007 Shewanella sediminis HAW-EB3 two-component system sensor kinase YP_001473744.1 2427516 R 425104 CDS YP_001473745.1 157375145 5612154 2429089..2429613 1 NC_009831.1 KEGG: slo:Shew_2099 DTW domain containing protein; DTW domain-containing protein 2429613 5612154 Ssed_2008 Shewanella sediminis HAW-EB3 DTW domain-containing protein YP_001473745.1 2429089 D 425104 CDS YP_001473746.1 157375146 5613928 complement(2429778..2433242) 1 NC_009831.1 KEGG: son:SO0404 hypothetical protein; hypothetical protein 2433242 5613928 Ssed_2009 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473746.1 2429778 R 425104 CDS YP_001473747.1 157375147 5613929 complement(2433269..2434162) 1 NC_009831.1 KEGG: son:SO0403 hypothetical protein; hypothetical protein 2434162 5613929 Ssed_2010 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473747.1 2433269 R 425104 CDS YP_001473748.1 157375148 5613930 2434913..2435023 1 NC_009831.1 KEGG: vpa:VP2892 hypothetical protein; hypothetical protein 2435023 5613930 Ssed_2011 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473748.1 2434913 D 425104 CDS YP_001473749.1 157375149 5613931 complement(2435236..2435916) 1 NC_009831.1 KEGG: slo:Shew_2098 channel protein, hemolysin III family; hemolysin III family channel protein 2435916 5613931 Ssed_2012 Shewanella sediminis HAW-EB3 hemolysin III family channel protein YP_001473749.1 2435236 R 425104 CDS YP_001473750.1 157375150 5614092 2436682..2438640 1 NC_009831.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2438640 5614092 Ssed_2013 Shewanella sediminis HAW-EB3 thiamine biosynthesis protein ThiC YP_001473750.1 2436682 D 425104 CDS YP_001473751.1 157375151 5614093 2438644..2440317 1 NC_009831.1 KEGG: spc:Sputcn32_1923 thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase, thiamine-phosphate diphosphorylase 2440317 5614093 Ssed_2014 Shewanella sediminis HAW-EB3 phosphomethylpyrimidine kinase, thiamine-phosphate diphosphorylase YP_001473751.1 2438644 D 425104 CDS YP_001473752.1 157375152 5614094 2440310..2441188 1 NC_009831.1 KEGG: sbl:Sbal_2024 UBA/ThiF-type NAD/FAD binding protein; UBA/ThiF-type NAD/FAD binding protein 2441188 5614094 Ssed_2015 Shewanella sediminis HAW-EB3 UBA/ThiF-type NAD/FAD binding protein YP_001473752.1 2440310 D 425104 CDS YP_001473753.1 157375153 5614095 2441175..2441420 1 NC_009831.1 KEGG: shw:Sputw3181_2083 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2441420 5614095 Ssed_2016 Shewanella sediminis HAW-EB3 thiamine biosynthesis protein ThiS YP_001473753.1 2441175 D 425104 CDS YP_001473754.1 157375154 5613839 2441422..2442186 1 NC_009831.1 KEGG: shn:Shewana3_1940 thiazole biosynthesis family protein; thiazole biosynthesis family protein 2442186 5613839 Ssed_2017 Shewanella sediminis HAW-EB3 thiazole biosynthesis family protein YP_001473754.1 2441422 D 425104 CDS YP_001473755.1 157375155 5613840 2442223..2443347 1 NC_009831.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 2443347 thiH 5613840 thiH Shewanella sediminis HAW-EB3 thiamine biosynthesis protein ThiH YP_001473755.1 2442223 D 425104 CDS YP_001473756.1 157375156 5613841 2443572..2443841 1 NC_009831.1 KEGG: slo:Shew_2090 conserved hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 2443841 5613841 Ssed_2019 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001473756.1 2443572 D 425104 CDS YP_001473757.1 157375157 5613842 2443847..2445286 1 NC_009831.1 KEGG: slo:Shew_2089 SrpA-related protein; SrpA-like protein 2445286 5613842 Ssed_2020 Shewanella sediminis HAW-EB3 SrpA-like protein YP_001473757.1 2443847 D 425104 CDS YP_001473758.1 157375158 5614049 complement(2445314..2446213) 1 NC_009831.1 KEGG: sbl:Sbal_2030 transcriptional regulator, LysR family; LysR family transcriptional regulator 2446213 5614049 Ssed_2021 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001473758.1 2445314 R 425104 CDS YP_001473759.1 157375159 5614050 complement(2446521..2447615) 1 NC_009831.1 KEGG: slo:Shew_2087 hypothetical protein; hypothetical protein 2447615 5614050 Ssed_2022 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473759.1 2446521 R 425104 CDS YP_001473760.1 157375160 5614051 complement(2447569..2449317) 1 NC_009831.1 KEGG: sbl:Sbal_2031 response regulator receiver protein; response regulator receiver protein 2449317 5614051 Ssed_2023 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001473760.1 2447569 R 425104 CDS YP_001473761.1 157375161 5613759 complement(2449280..2450242) 1 NC_009831.1 KEGG: slo:Shew_2085 alpha-L-glutamate ligase-like protein; alpha-L-glutamate ligase 2450242 5613759 Ssed_2024 Shewanella sediminis HAW-EB3 alpha-L-glutamate ligase YP_001473761.1 2449280 R 425104 CDS YP_001473762.1 157375162 5613760 complement(2450245..2451756) 1 NC_009831.1 KEGG: slo:Shew_2084 gonadoliberin III-related protein; gonadoliberin III-like protein 2451756 5613760 Ssed_2025 Shewanella sediminis HAW-EB3 gonadoliberin III-like protein YP_001473762.1 2450245 R 425104 CDS YP_001473763.1 157375163 5613761 complement(2451768..2452511) 1 NC_009831.1 KEGG: slo:Shew_2083 protein of unknown function DUF785; hypothetical protein 2452511 5613761 Ssed_2026 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473763.1 2451768 R 425104 CDS YP_001473764.1 157375164 5613762 complement(2452610..2453602) 1 NC_009831.1 KEGG: slo:Shew_2082 methyltransferase; methyltransferase 2453602 5613762 Ssed_2027 Shewanella sediminis HAW-EB3 methyltransferase YP_001473764.1 2452610 R 425104 CDS YP_001473765.1 157375165 5613969 complement(2453706..2454437) 1 NC_009831.1 KEGG: slo:Shew_2081 methyltransferase; methyltransferase 2454437 5613969 Ssed_2028 Shewanella sediminis HAW-EB3 methyltransferase YP_001473765.1 2453706 R 425104 CDS YP_001473766.1 157375166 5613970 2454584..2457382 1 NC_009831.1 KEGG: shn:Shewana3_1952 diguanylate cyclase; diguanylate cyclase 2457382 5613970 Ssed_2029 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473766.1 2454584 D 425104 CDS YP_001473767.1 157375167 5613971 2457554..2459341 1 NC_009831.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2459341 aspS 5613971 aspS Shewanella sediminis HAW-EB3 aspartyl-tRNA synthetase YP_001473767.1 2457554 D 425104 CDS YP_001473768.1 157375168 5613972 2459429..2460175 1 NC_009831.1 KEGG: slo:Shew_2078 protein of unknown function DUF28; hypothetical protein 2460175 5613972 Ssed_2031 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473768.1 2459429 D 425104 CDS YP_001473769.1 157375169 5614216 2460179..2460700 1 NC_009831.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2460700 ruvC 5614216 ruvC Shewanella sediminis HAW-EB3 Holliday junction resolvase YP_001473769.1 2460179 D 425104 CDS YP_001473770.1 157375170 5614217 2460697..2461314 1 NC_009831.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2461314 ruvA 5614217 ruvA Shewanella sediminis HAW-EB3 Holliday junction DNA helicase RuvA YP_001473770.1 2460697 D 425104 CDS YP_001473771.1 157375171 5614218 2461338..2462354 1 NC_009831.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2462354 ruvB 5614218 ruvB Shewanella sediminis HAW-EB3 Holliday junction DNA helicase RuvB YP_001473771.1 2461338 D 425104 CDS YP_001473772.1 157375172 5613770 2462594..2463610 1 NC_009831.1 KEGG: cef:CE1569 hypothetical protein; hypothetical protein 2463610 5613770 Ssed_2035 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473772.1 2462594 D 425104 CDS YP_001473773.1 157375173 5613771 2464419..2466944 1 NC_009831.1 KEGG: spc:Sputcn32_1940 TonB-dependent receptor; TonB-dependent receptor 2466944 5613771 Ssed_2036 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001473773.1 2464419 D 425104 CDS YP_001473774.1 157375174 5613772 complement(2467287..2467697) 1 NC_009831.1 KEGG: slo:Shew_2073 lactoylglutathione lyase; lactoylglutathione lyase 2467697 5613772 Ssed_2037 Shewanella sediminis HAW-EB3 lactoylglutathione lyase YP_001473774.1 2467287 R 425104 CDS YP_001473775.1 157375175 5613773 complement(2468359..2468997) 1 NC_009831.1 KEGG: shm:Shewmr7_1905 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase 2468997 5613773 Ssed_2038 Shewanella sediminis HAW-EB3 DNA-(apurinic or apyrimidinic site) lyase YP_001473775.1 2468359 R 425104 CDS YP_001473776.1 157375176 5614004 complement(2469030..2469740) 1 NC_009831.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 2469740 5614004 Ssed_2039 Shewanella sediminis HAW-EB3 electron transport complex protein RsxE YP_001473776.1 2469030 R 425104 CDS YP_001473777.1 157375177 5614005 complement(2469737..2470363) 1 NC_009831.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2470363 5614005 Ssed_2040 Shewanella sediminis HAW-EB3 electron transport complex protein RnfG YP_001473777.1 2469737 R 425104 CDS YP_001473778.1 157375178 5614006 complement(2470393..2471445) 1 NC_009831.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 2471445 rnfD 5614006 rnfD Shewanella sediminis HAW-EB3 electron transport complex protein RnfD YP_001473778.1 2470393 R 425104 CDS YP_001473779.1 157375179 5614007 complement(2471449..2473977) 1 NC_009831.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 2473977 5614007 Ssed_2042 Shewanella sediminis HAW-EB3 electron transport complex protein RnfC YP_001473779.1 2471449 R 425104 CDS YP_001473780.1 157375180 5610784 complement(2473971..2474540) 1 NC_009831.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 2474540 5610784 Ssed_2043 Shewanella sediminis HAW-EB3 electron transport complex protein RnfB YP_001473780.1 2473971 R 425104 CDS YP_001473781.1 157375181 5610785 complement(2474543..2475121) 1 NC_009831.1 KEGG: shm:Shewmr7_1911 electron transport complex, RnfABCDGE type, A subunit; Na(+)-translocating NADH-quinone reductase subunit E 2475121 5610785 Ssed_2044 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit E YP_001473781.1 2474543 R 425104 CDS YP_001473782.1 157375182 5610786 complement(2475230..2477128) 1 NC_009831.1 KEGG: shn:Shewana3_2167 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 2477128 5610786 Ssed_2045 Shewanella sediminis HAW-EB3 diguanylate cyclase/phosphodiesterase YP_001473782.1 2475230 R 425104 CDS YP_001473783.1 157375183 5614059 2479256..2481283 1 NC_009831.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2481283 5614059 Ssed_2046 Shewanella sediminis HAW-EB3 excinuclease ABC subunit B YP_001473783.1 2479256 D 425104 CDS YP_001473784.1 157375184 5609978 complement(2481323..2481838) 1 NC_009831.1 KEGG: shw:Sputw3181_2156 rhomboid family protein; rhomboid family protein 2481838 5609978 Ssed_2047 Shewanella sediminis HAW-EB3 rhomboid family protein YP_001473784.1 2481323 R 425104 CDS YP_001473785.1 157375185 5609979 complement(2481935..2482633) 1 NC_009831.1 KEGG: slo:Shew_2062 ExsB protein; ExsB protein 2482633 5609979 Ssed_2048 Shewanella sediminis HAW-EB3 ExsB protein YP_001473785.1 2481935 R 425104 CDS YP_001473786.1 157375186 5609980 2482821..2483489 1 NC_009831.1 KEGG: spc:Sputcn32_1855 radical activating enzyme; radical activating enzyme 2483489 5609980 Ssed_2049 Shewanella sediminis HAW-EB3 radical activating enzyme YP_001473786.1 2482821 D 425104 CDS YP_001473787.1 157375187 5611305 complement(2483486..2484547) 1 NC_009831.1 KEGG: slo:Shew_2060 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 2484547 5611305 Ssed_2050 Shewanella sediminis HAW-EB3 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001473787.1 2483486 R 425104 CDS YP_001473788.1 157375188 5609647 2485769..2486272 1 NC_009831.1 KEGG: shm:Shewmr7_1918 hypothetical protein; hypothetical protein 2486272 5609647 Ssed_2051 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473788.1 2485769 D 425104 CDS YP_001473789.1 157375189 5611307 2486551..2486838 1 NC_009831.1 KEGG: sbl:Sbal_4537 hypothetical protein; hypothetical protein 2486838 5611307 Ssed_2052 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473789.1 2486551 D 425104 CDS YP_001473790.1 157375190 5611308 2487012..2489180 1 NC_009831.1 KEGG: saz:Sama_1821 diguanylate phosphodiesterase; diguanylate phosphodiesterase 2489180 5611308 Ssed_2053 Shewanella sediminis HAW-EB3 diguanylate phosphodiesterase YP_001473790.1 2487012 D 425104 CDS YP_001473791.1 157375191 5612381 complement(2489235..2489720) 1 NC_009831.1 KEGG: slo:Shew_2056 sec-C motif domain protein; SecC motif-containing protein 2489720 5612381 Ssed_2054 Shewanella sediminis HAW-EB3 SecC motif-containing protein YP_001473791.1 2489235 R 425104 CDS YP_001473792.1 157375192 5612382 complement(2489710..2490279) 1 NC_009831.1 KEGG: slo:Shew_2055 hypothetical protein; hypothetical protein 2490279 5612382 Ssed_2055 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473792.1 2489710 R 425104 CDS YP_001473793.1 157375193 5612383 2490380..2490970 1 NC_009831.1 KEGG: she:Shewmr4_2052 Smr protein/MutS2; Smr protein/MutS2 2490970 5612383 Ssed_2056 Shewanella sediminis HAW-EB3 Smr protein/MutS2 YP_001473793.1 2490380 D 425104 CDS YP_001473794.1 157375194 5612384 complement(2491071..2492906) 1 NC_009831.1 KEGG: slo:Shew_2053 peptidyl-dipeptidase A; peptidyl-dipeptidase A 2492906 5612384 Ssed_2057 Shewanella sediminis HAW-EB3 peptidyl-dipeptidase A YP_001473794.1 2491071 R 425104 CDS YP_001473795.1 157375195 5611687 complement(2493092..2494318) 1 NC_009831.1 KEGG: sde:Sde_2468 amine oxidase, flavin-containing; NAD/FAD-binding protein-like protein 2494318 5611687 Ssed_2058 Shewanella sediminis HAW-EB3 NAD/FAD-binding protein-like protein YP_001473795.1 2493092 R 425104 CDS YP_001473796.1 157375196 5611688 complement(2494356..2495885) 1 NC_009831.1 KEGG: ana:alr4631 unknown protein; hypothetical protein 2495885 5611688 Ssed_2059 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473796.1 2494356 R 425104 CDS YP_001473797.1 157375197 5611689 2496175..2496774 1 NC_009831.1 KEGG: sfr:Sfri_3117 hypothetical protein; hypothetical protein 2496774 5611689 Ssed_2060 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473797.1 2496175 D 425104 CDS YP_001473798.1 157375198 5612269 2497101..2497325 1 NC_009831.1 KEGG: pin:Ping_1766 hypothetical protein; hypothetical protein 2497325 5612269 Ssed_2061 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473798.1 2497101 D 425104 CDS YP_001473799.1 157375199 5612270 2497435..2498352 1 NC_009831.1 KEGG: ppr:PBPRA1847 hypothetical protein; hypothetical protein 2498352 5612270 Ssed_2062 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473799.1 2497435 D 425104 CDS YP_001473800.1 157375200 5612271 2498422..2498889 1 NC_009831.1 KEGG: vch:VCA0330 hypothetical protein; hypothetical protein 2498889 5612271 Ssed_2063 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473800.1 2498422 D 425104 CDS YP_001473801.1 157375201 5612272 2498889..2499740 1 NC_009831.1 KEGG: ilo:IL2088 predicted hydrolase of the alpha/beta superfamily; alpha/beta fold family hydrolase 2499740 5612272 Ssed_2064 Shewanella sediminis HAW-EB3 alpha/beta fold family hydrolase YP_001473801.1 2498889 D 425104 CDS YP_001473802.1 157375202 5614116 complement(2499849..2501222) 1 NC_009831.1 KEGG: ppr:PBPRA1999 transporter, NadC family; NadC family transporter 2501222 5614116 Ssed_2065 Shewanella sediminis HAW-EB3 NadC family transporter YP_001473802.1 2499849 R 425104 CDS YP_001473803.1 157375203 5614117 2501969..2502604 1 NC_009831.1 KEGG: saz:Sama_1816 transcriptional regulator, TetR family; TetR family transcriptional regulator 2502604 5614117 Ssed_2066 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001473803.1 2501969 D 425104 CDS YP_001473804.1 157375204 5614118 2502628..2504904 1 NC_009831.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2504904 5614118 Ssed_2067 Shewanella sediminis HAW-EB3 acyl-CoA dehydrogenase YP_001473804.1 2502628 D 425104 CDS YP_001473805.1 157375205 5614119 complement(2505238..2506677) 1 NC_009831.1 KEGG: slo:Shew_2050 pyruvate kinase; pyruvate kinase 2506677 5614119 Ssed_2068 Shewanella sediminis HAW-EB3 pyruvate kinase YP_001473805.1 2505238 R 425104 CDS YP_001473806.1 157375206 5611539 complement(2506862..2507716) 1 NC_009831.1 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2507716 5611539 Ssed_2069 Shewanella sediminis HAW-EB3 DNA-binding transcriptional regulator HexR YP_001473806.1 2506862 R 425104 CDS YP_001473807.1 157375207 5611540 2508026..2509498 1 NC_009831.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2509498 5611540 Ssed_2070 Shewanella sediminis HAW-EB3 glucose-6-phosphate 1-dehydrogenase YP_001473807.1 2508026 D 425104 CDS YP_001473808.1 157375208 5611541 2509511..2510209 1 NC_009831.1 KEGG: sbl:Sbal_4526 hypothetical protein; hypothetical protein 2510209 5611541 Ssed_2071 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473808.1 2509511 D 425104 CDS YP_001473809.1 157375209 5611542 2510219..2512045 1 NC_009831.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 2512045 5611542 Ssed_2072 Shewanella sediminis HAW-EB3 phosphogluconate dehydratase YP_001473809.1 2510219 D 425104 CDS YP_001473810.1 157375210 5614244 2512063..2512704 1 NC_009831.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2512704 5614244 Ssed_2073 Shewanella sediminis HAW-EB3 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_001473810.1 2512063 D 425104 CDS YP_001473811.1 157375211 5614245 complement(2512795..2513364) 1 NC_009831.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 2513364 5614245 Ssed_2074 Shewanella sediminis HAW-EB3 ecotin YP_001473811.1 2512795 R 425104 CDS YP_001473812.1 157375212 5614246 2513731..2514756 1 NC_009831.1 KEGG: slo:Shew_2043 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2514756 5614246 Ssed_2075 Shewanella sediminis HAW-EB3 cation diffusion facilitator family transporter YP_001473812.1 2513731 D 425104 CDS YP_001473813.1 157375213 5610513 2514787..2515206 1 NC_009831.1 KEGG: shn:Shewana3_2230 transcriptional regulator, MarR family; MarR family transcriptional regulator 2515206 5610513 Ssed_2076 Shewanella sediminis HAW-EB3 MarR family transcriptional regulator YP_001473813.1 2514787 D 425104 CDS YP_001473814.1 157375214 5610514 2515587..2516618 1 NC_009831.1 KEGG: slo:Shew_2040 diguanylate cyclase; diguanylate cyclase 2516618 5610514 Ssed_2077 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473814.1 2515587 D 425104 CDS YP_001473815.1 157375215 5610515 complement(2516697..2519387) 1 NC_009831.1 KEGG: slo:Shew_2039 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2519387 5610515 Ssed_2078 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001473815.1 2516697 R 425104 CDS YP_001473816.1 157375216 5610516 complement(2519819..2520760) 1 NC_009831.1 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase 2520760 5610516 Ssed_2079 Shewanella sediminis HAW-EB3 lipid kinase YP_001473816.1 2519819 R 425104 CDS YP_001473817.1 157375217 5611286 2521360..2522475 1 NC_009831.1 KEGG: lbl:LBL_4195 cobalamin biosynthesis protein; cobalamin biosynthesis protein 2522475 5611286 Ssed_2080 Shewanella sediminis HAW-EB3 cobalamin biosynthesis protein YP_001473817.1 2521360 D 425104 CDS YP_001473818.1 157375218 5611287 2522475..2523131 1 NC_009831.1 KEGG: mca:MCA2298 precorrin-8X methylmutase; precorrin-8X methylmutase 2523131 5611287 Ssed_2081 Shewanella sediminis HAW-EB3 precorrin-8X methylmutase YP_001473818.1 2522475 D 425104 CDS YP_001473819.1 157375219 5611288 2523128..2524384 1 NC_009831.1 KEGG: lbl:LBL_4197 precorrin-6Y C5,15-methyltransferase (decarboxylating); precorrin-6Y C(5,15)-methyltransferase 2524384 5611288 Ssed_2082 Shewanella sediminis HAW-EB3 precorrin-6Y C(5,15)-methyltransferase YP_001473819.1 2523128 D 425104 CDS YP_001473820.1 157375220 5611289 2524381..2525139 1 NC_009831.1 KEGG: lil:LB159 precorrin-2 methyltransferase; precorrin-2 methyltransferase 2525139 5611289 Ssed_2083 Shewanella sediminis HAW-EB3 precorrin-2 methyltransferase YP_001473820.1 2524381 D 425104 CDS YP_001473821.1 157375221 5610450 2525139..2526665 1 NC_009831.1 KEGG: lbl:LBL_4199 cobalamin biosynthesis protein CbiG; cobalamin biosynthesis protein CbiG-like protein 2526665 5610450 Ssed_2084 Shewanella sediminis HAW-EB3 cobalamin biosynthesis protein CbiG-like protein YP_001473821.1 2525139 D 425104 CDS YP_001473822.1 157375222 5610451 2526776..2527591 1 NC_009831.1 KEGG: pca:Pcar_0478 cobalt chelatase; cobalamin biosynthesis protein CbiK Co2+ chelatase-like protein 2527591 5610451 Ssed_2085 Shewanella sediminis HAW-EB3 cobalamin biosynthesis protein CbiK Co2+ chelatase-like protein YP_001473822.1 2526776 D 425104 CDS YP_001473823.1 157375223 5610452 2527588..2528451 1 NC_009831.1 KEGG: lbl:LBL_4200 precorrin-3B C(17)-methyltransferase; precorrin-3B C(17)-methyltransferase 2528451 5610452 Ssed_2086 Shewanella sediminis HAW-EB3 precorrin-3B C(17)-methyltransferase YP_001473823.1 2527588 D 425104 CDS YP_001473824.1 157375224 5610464 2528448..2529221 1 NC_009831.1 KEGG: lil:LB156 precorrin-3 methylase; precorrin-3 methylase 2529221 5610464 Ssed_2087 Shewanella sediminis HAW-EB3 precorrin-3 methylase YP_001473824.1 2528448 D 425104 CDS YP_001473825.1 157375225 5610465 2529218..2530585 1 NC_009831.1 KEGG: dps:DP1734 probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA); uroporphyrinogen-III methylase-like protein 2530585 5610465 Ssed_2088 Shewanella sediminis HAW-EB3 uroporphyrinogen-III methylase-like protein YP_001473825.1 2529218 D 425104 CDS YP_001473826.1 157375226 5610466 2530575..2531480 1 NC_009831.1 KEGG: cobD; cobalamin biosynthetic protein; cobD; cobalamin biosynthetic protein 2531480 5610466 Ssed_2089 Shewanella sediminis HAW-EB3 cobD; cobalamin biosynthetic protein YP_001473826.1 2530575 D 425104 CDS YP_001473827.1 157375227 5610467 2531477..2532595 1 NC_009831.1 KEGG: psa:PST_1296 cobalamin biosynthetic protein CobC; cobalamin biosynthetic protein CobC 2532595 5610467 Ssed_2090 Shewanella sediminis HAW-EB3 cobalamin biosynthetic protein CobC YP_001473827.1 2531477 D 425104 CDS YP_001473828.1 157375228 5610505 2532946..2533683 1 NC_009831.1 KEGG: shn:Shewana3_4008 transcriptional regulator, LuxR family; hypothetical protein 2533683 5610505 Ssed_2091 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473828.1 2532946 D 425104 CDS YP_001473829.1 157375229 5610506 2534170..2534940 1 NC_009831.1 KEGG: rsp:RSP_6168 ABC cobalt transporter, periplasmic binding protein CbiN; cobalt ABC transporter substrate-binding protein CbiN 2534940 5610506 Ssed_2092 Shewanella sediminis HAW-EB3 cobalt ABC transporter substrate-binding protein CbiN YP_001473829.1 2534170 D 425104 CDS YP_001473830.1 157375230 5610507 2534950..2535555 1 NC_009831.1 KEGG: mgm:Mmc1_3140 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 2535555 5610507 Ssed_2093 Shewanella sediminis HAW-EB3 cobalamin (vitamin B12) biosynthesis protein CbiM YP_001473830.1 2534950 D 425104 CDS YP_001473831.1 157375231 5610508 2535548..2536108 1 NC_009831.1 KEGG: mag:amb4336 hypothetical protein; hypothetical protein 2536108 5610508 Ssed_2094 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473831.1 2535548 D 425104 CDS YP_001473832.1 157375232 5610272 2536105..2536872 1 NC_009831.1 KEGG: rpc:RPC_1961 cobalt ABC transporter CbiQ, permease subunit; ABC-type cobalt transport system permease component CbiQ and related transporter-like protein 2536872 5610272 Ssed_2095 Shewanella sediminis HAW-EB3 ABC-type cobalt transport system permease component CbiQ and related transporter-like protein YP_001473832.1 2536105 D 425104 CDS YP_001473833.1 157375233 5610273 2536919..2537584 1 NC_009831.1 KEGG: rpc:RPC_1962 ABC transporter related; ABC transporter 2537584 5610273 Ssed_2096 Shewanella sediminis HAW-EB3 ABC transporter YP_001473833.1 2536919 D 425104 CDS YP_001473834.1 157375234 5610274 2537859..2538755 1 NC_009831.1 KEGG: ppr:PBPRB1794 hypothetical protein; hypothetical protein 2538755 5610274 Ssed_2097 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473834.1 2537859 D 425104 CDS YP_001473835.1 157375235 5610275 complement(2538866..2539675) 1 NC_009831.1 KEGG: sat:SYN_00385 hypothetical protein; hypothetical protein 2539675 5610275 Ssed_2098 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473835.1 2538866 R 425104 CDS YP_001473836.1 157375236 5612295 complement(2540616..2540897) 1 NC_009831.1 KEGG: det:DET1558 reductive dehalogenase anchoring protein; reductive dehalogenase anchoring protein 2540897 5612295 Ssed_2099 Shewanella sediminis HAW-EB3 reductive dehalogenase anchoring protein YP_001473836.1 2540616 R 425104 CDS YP_001473837.1 157375237 5612296 complement(2540904..2542328) 1 NC_009831.1 KEGG: dsy:DSY2839 tetrachloroethene dehalogenase; tetrachloroethene dehalogenase 2542328 5612296 Ssed_2100 Shewanella sediminis HAW-EB3 tetrachloroethene dehalogenase YP_001473837.1 2540904 R 425104 CDS YP_001473838.1 157375238 5612297 complement(2542457..2543368) 1 NC_009831.1 KEGG: ppr:PBPRB1899 hypothetical protein; hypothetical protein 2543368 5612297 Ssed_2101 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473838.1 2542457 R 425104 CDS YP_001473839.1 157375239 5612791 2543947..2545056 1 NC_009831.1 KEGG: ter:Tery_1492 glycosyl transferase, family 2; hypothetical protein 2545056 5612791 Ssed_2102 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473839.1 2543947 D 425104 CDS YP_001473840.1 157375240 5612792 2545094..2546617 1 NC_009831.1 KEGG: deb:DehaBAV1_0988 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hypothetical protein 2546617 5612792 Ssed_2103 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473840.1 2545094 D 425104 CDS YP_001473841.1 157375241 5612793 2546617..2546925 1 NC_009831.1 hypothetical protein 2546925 5612793 Ssed_2104 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473841.1 2546617 D 425104 CDS YP_001473842.1 157375242 5612794 2547010..2548236 1 NC_009831.1 KEGG: ppr:PBPRB1795 hypothetical protein; hypothetical protein 2548236 5612794 Ssed_2105 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473842.1 2547010 D 425104 CDS YP_001473843.1 157375243 5614236 2548518..2549393 1 NC_009831.1 KEGG: ppr:PBPRB1794 hypothetical protein; hypothetical protein 2549393 5614236 Ssed_2106 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473843.1 2548518 D 425104 CDS YP_001473844.1 157375244 5614237 complement(2549490..2550251) 1 NC_009831.1 KEGG: cps:CPS_4645 hypothetical protein; amino acid ABC transporter periplasmic protein 2550251 5614237 Ssed_2107 Shewanella sediminis HAW-EB3 amino acid ABC transporter periplasmic protein YP_001473844.1 2549490 R 425104 CDS YP_001473845.1 157375245 5614238 2550465..2551034 1 NC_009831.1 KEGG: sen:SACE_1433 probable phosphoglycerate mutase (phosphoglyceromutase); fructose-2 6-bisphosphatase-like protein 2551034 5614238 Ssed_2108 Shewanella sediminis HAW-EB3 fructose-2 6-bisphosphatase-like protein YP_001473845.1 2550465 D 425104 CDS YP_001473846.1 157375246 5614239 2551794..2552438 1 NC_009831.1 hypothetical protein 2552438 5614239 Ssed_2109 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473846.1 2551794 D 425104 CDS YP_001473847.1 157375247 5611809 2553316..2553978 1 NC_009831.1 KEGG: pat:Patl_1418 transcriptional regulator, GntR family; GntR family transcriptional regulator 2553978 5611809 Ssed_2110 Shewanella sediminis HAW-EB3 GntR family transcriptional regulator YP_001473847.1 2553316 D 425104 CDS YP_001473848.1 157375248 5611810 2554047..2554925 1 NC_009831.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 2554925 prpB 5611810 prpB Shewanella sediminis HAW-EB3 2-methylisocitrate lyase YP_001473848.1 2554047 D 425104 CDS YP_001473849.1 157375249 5611811 2555063..2556187 1 NC_009831.1 KEGG: slo:Shew_1821 2-methylcitrate synthase/citrate synthase II; 2-methylcitrate synthase 2556187 5611811 Ssed_2112 Shewanella sediminis HAW-EB3 2-methylcitrate synthase YP_001473849.1 2555063 D 425104 CDS YP_001473850.1 157375250 5611812 2556254..2558860 1 NC_009831.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2558860 5611812 Ssed_2113 Shewanella sediminis HAW-EB3 aconitate hydratase YP_001473850.1 2556254 D 425104 CDS YP_001473851.1 157375251 5609950 2558973..2560190 1 NC_009831.1 KEGG: sfr:Sfri_1860 AcnD-accessory protein PrpF; AcnD-accessory protein PrpF 2560190 5609950 Ssed_2114 Shewanella sediminis HAW-EB3 AcnD-accessory protein PrpF YP_001473851.1 2558973 D 425104 CDS YP_001473852.1 157375252 5609951 complement(2560368..2562017) 1 NC_009831.1 KEGG: ppr:PBPRA1657 Uup, ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATPase 2562017 5609951 Ssed_2115 Shewanella sediminis HAW-EB3 ABC transporter ATPase YP_001473852.1 2560368 R 425104 CDS YP_001473853.1 157375253 5609952 2562300..2562800 1 NC_009831.1 KEGG: sfr:Sfri_0770 hypothetical protein; hypothetical protein 2562800 5609952 Ssed_2116 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473853.1 2562300 D 425104 CDS YP_001473854.1 157375254 5613516 complement(2564557..2565933) 1 NC_009831.1 KEGG: slo:Shew_2037 MATE efflux family protein; MATE efflux family protein 2565933 5613516 Ssed_2117 Shewanella sediminis HAW-EB3 MATE efflux family protein YP_001473854.1 2564557 R 425104 CDS YP_001473855.1 157375255 5613688 2565948..2566580 1 NC_009831.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2566580 5613688 Ssed_2118 Shewanella sediminis HAW-EB3 riboflavin synthase subunit alpha YP_001473855.1 2565948 D 425104 CDS YP_001473856.1 157375256 5613689 complement(2566622..2566822) 1 NC_009831.1 KEGG: shn:Shewana3_2041 hypothetical protein; hypothetical protein 2566822 5613689 Ssed_2119 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473856.1 2566622 R 425104 CDS YP_001473857.1 157375257 5613690 2567679..2569607 1 NC_009831.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2569607 5613690 Ssed_2120 Shewanella sediminis HAW-EB3 threonyl-tRNA synthetase YP_001473857.1 2567679 D 425104 CDS YP_001473858.1 157375258 5610709 2569818..2570153 1 NC_009831.1 KEGG: slo:Shew_2031 translation initiation factor IF-3; translation initiation factor IF-3 2570153 5610709 Ssed_2121 Shewanella sediminis HAW-EB3 translation initiation factor IF-3 YP_001473858.1 2569818 D 425104 CDS YP_001473859.1 157375259 5610710 2570237..2570431 1 NC_009831.1 KEGG: sfr:Sfri_2026 ribosomal protein L35; 50S ribosomal protein L35 2570431 rpmI 5610710 rpmI Shewanella sediminis HAW-EB3 50S ribosomal protein L35 YP_001473859.1 2570237 D 425104 CDS YP_001473860.1 157375260 5610711 2570450..2570809 1 NC_009831.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2570809 rplT 5610711 rplT Shewanella sediminis HAW-EB3 50S ribosomal protein L20 YP_001473860.1 2570450 D 425104 CDS YP_001473861.1 157375261 5610712 complement(2571083..2572033) 1 NC_009831.1 KEGG: slo:Shew_2028 thioredoxin reductase; thioredoxin reductase 2572033 5610712 Ssed_2124 Shewanella sediminis HAW-EB3 thioredoxin reductase YP_001473861.1 2571083 R 425104 CDS YP_001473862.1 157375262 5610658 complement(2572169..2573284) 1 NC_009831.1 KEGG: slo:Shew_2026 alanine dehydrogenase; alanine dehydrogenase 2573284 5610658 Ssed_2125 Shewanella sediminis HAW-EB3 alanine dehydrogenase YP_001473862.1 2572169 R 425104 CDS YP_001473863.1 157375263 5610659 2573465..2573968 1 NC_009831.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 2573968 5610659 Ssed_2126 Shewanella sediminis HAW-EB3 leucine-responsive transcriptional regulator YP_001473863.1 2573465 D 425104 CDS YP_001473864.1 157375264 5610660 2574152..2576665 1 NC_009831.1 KEGG: slo:Shew_2024 cell divisionFtsK/SpoIIIE; cell division protein FtsK 2576665 5610660 Ssed_2127 Shewanella sediminis HAW-EB3 cell division protein FtsK YP_001473864.1 2574152 D 425104 CDS YP_001473865.1 157375265 5610661 2576780..2577406 1 NC_009831.1 KEGG: slo:Shew_2023 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 2577406 5610661 Ssed_2128 Shewanella sediminis HAW-EB3 outer membrane lipoprotein carrier protein LolA YP_001473865.1 2576780 D 425104 CDS YP_001473866.1 157375266 5610574 2577416..2578747 1 NC_009831.1 KEGG: slo:Shew_2022 AAA ATPase, central domain protein; recombination factor protein RarA 2578747 5610574 Ssed_2129 Shewanella sediminis HAW-EB3 recombination factor protein RarA YP_001473866.1 2577416 D 425104 CDS YP_001473867.1 157375267 5610575 2578740..2579114 1 NC_009831.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2579114 5610575 Ssed_2130 Shewanella sediminis HAW-EB3 camphor resistance protein CrcB YP_001473867.1 2578740 D 425104 CDS YP_001473868.1 157375268 5610576 2579133..2580419 1 NC_009831.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2580419 5610576 Ssed_2131 Shewanella sediminis HAW-EB3 seryl-tRNA synthetase YP_001473868.1 2579133 D 425104 CDS YP_001473869.1 157375269 5610639 complement(2580854..2581189) 1 NC_009831.1 KEGG: slo:Shew_2018 DsrC family protein; DsrC family protein 2581189 5610639 Ssed_2132 Shewanella sediminis HAW-EB3 DsrC family protein YP_001473869.1 2580854 R 425104 CDS YP_001473870.1 157375270 5610640 complement(2581300..2581515) 1 NC_009831.1 KEGG: sbl:Sbal_2163 DsrH family protein; DsrH family protein 2581515 5610640 Ssed_2133 Shewanella sediminis HAW-EB3 DsrH family protein YP_001473870.1 2581300 R 425104 CDS YP_001473871.1 157375271 5610641 complement(2581581..2581961) 1 NC_009831.1 KEGG: sbl:Sbal_2164 DsrE family protein; DsrE family protein 2581961 5610641 Ssed_2134 Shewanella sediminis HAW-EB3 DsrE family protein YP_001473871.1 2581581 R 425104 CDS YP_001473872.1 157375272 5610642 complement(2582008..2582397) 1 NC_009831.1 KEGG: slo:Shew_2015 DsrE family protein; DsrE family protein 2582397 5610642 Ssed_2135 Shewanella sediminis HAW-EB3 DsrE family protein YP_001473872.1 2582008 R 425104 CDS YP_001473873.1 157375273 5610564 complement(2582563..2583222) 1 NC_009831.1 KEGG: sbl:Sbal_2166 protein of unknown function UPF0005; hypothetical protein 2583222 5610564 Ssed_2136 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473873.1 2582563 R 425104 CDS YP_001473874.1 157375274 5610565 complement(2583472..2584374) 1 NC_009831.1 KEGG: slo:Shew_2013 transcriptional regulator, LysR family; DNA-binding transcriptional regulator 2584374 5610565 Ssed_2137 Shewanella sediminis HAW-EB3 DNA-binding transcriptional regulator YP_001473874.1 2583472 R 425104 CDS YP_001473875.1 157375275 5610566 2584412..2585752 1 NC_009831.1 uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 2585752 5610566 Ssed_2138 Shewanella sediminis HAW-EB3 inner membrane transport protein YdhC YP_001473875.1 2584412 D 425104 CDS YP_001473876.1 157375276 5609988 complement(2586794..2588008) 1 NC_009831.1 hypothetical protein 2588008 5609988 Ssed_2139 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473876.1 2586794 R 425104 CDS YP_001473877.1 157375277 5610550 complement(2588337..2590211) 1 NC_009831.1 hypothetical protein 2590211 5610550 Ssed_2140 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473877.1 2588337 R 425104 CDS YP_001473878.1 157375278 5610551 2590323..2591156 1 NC_009831.1 KEGG: son:SO4624 transcriptional regulator, LuxR family; hypothetical protein 2591156 5610551 Ssed_2141 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473878.1 2590323 D 425104 CDS YP_001473879.1 157375279 5610552 complement(2591241..2592002) 1 NC_009831.1 KEGG: son:SO4624 transcriptional regulator, LuxR family; hypothetical protein 2592002 5610552 Ssed_2142 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473879.1 2591241 R 425104 CDS YP_001473880.1 157375280 5610553 complement(2592192..2594090) 1 NC_009831.1 hypothetical protein 2594090 5610553 Ssed_2143 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473880.1 2592192 R 425104 CDS YP_001473881.1 157375281 5610533 complement(2594437..2595198) 1 NC_009831.1 KEGG: spc:Sputcn32_3799 response regulator receiver protein; hypothetical protein 2595198 5610533 Ssed_2144 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473881.1 2594437 R 425104 CDS YP_001473882.1 157375282 5610534 complement(2595356..2597311) 1 NC_009831.1 hypothetical protein 2597311 5610534 Ssed_2145 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473882.1 2595356 R 425104 CDS YP_001473883.1 157375283 5610535 complement(2597657..2598550) 1 NC_009831.1 KEGG: afu:AF1397m spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein (PotD); Fe3+-hydroxamate ABC transporter periplasmic component-like protein 2598550 5610535 Ssed_2146 Shewanella sediminis HAW-EB3 Fe3+-hydroxamate ABC transporter periplasmic component-like protein YP_001473883.1 2597657 R 425104 CDS YP_001473884.1 157375284 5610529 2598738..2599622 1 NC_009831.1 KEGG: cps:CPS_1066 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 2599622 5610529 Ssed_2147 Shewanella sediminis HAW-EB3 ABC transporter ATP-binding protein YP_001473884.1 2598738 D 425104 CDS YP_001473885.1 157375285 5610530 2599619..2600602 1 NC_009831.1 KEGG: cps:CPS_1067 ABC transporter, permease; ABC transporter permease 2600602 5610530 Ssed_2148 Shewanella sediminis HAW-EB3 ABC transporter permease YP_001473885.1 2599619 D 425104 CDS YP_001473886.1 157375286 5610531 2600895..2601809 1 NC_009831.1 KEGG: sbl:Sbal_1588 cytochrome c family protein; cytochrome c family protein 2601809 5610531 Ssed_2149 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001473886.1 2600895 D 425104 CDS YP_001473887.1 157375287 5610532 2601821..2603830 1 NC_009831.1 KEGG: sfr:Sfri_3129 outer membrane protein; outer membrane protein 2603830 5610532 Ssed_2150 Shewanella sediminis HAW-EB3 outer membrane protein YP_001473887.1 2601821 D 425104 CDS YP_001473888.1 157375288 5610423 2604163..2604561 1 NC_009831.1 KEGG: vfi:VF1067 transporter; transporter 2604561 5610423 Ssed_2151 Shewanella sediminis HAW-EB3 transporter YP_001473888.1 2604163 D 425104 CDS YP_001473889.1 157375289 5610424 2605004..2605909 1 NC_009831.1 KEGG: cps:CPS_1768 hypothetical protein; hypothetical protein 2605909 5610424 Ssed_2152 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473889.1 2605004 D 425104 CDS YP_001473890.1 157375290 5610425 complement(2606044..2607060) 1 NC_009831.1 KEGG: cte:CT0416 hypothetical protein; hypothetical protein 2607060 5610425 Ssed_2153 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473890.1 2606044 R 425104 CDS YP_001473891.1 157375291 5610426 complement(2607087..2607671) 1 NC_009831.1 KEGG: vfi:VF1750 cob(I)yrinic acid a,c-diamide adenosyltransferase; cob(I)yrinic acid a,c-diamide adenosyltransferase 2607671 5610426 Ssed_2154 Shewanella sediminis HAW-EB3 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_001473891.1 2607087 R 425104 CDS YP_001473892.1 157375292 5612019 complement(2607668..2608444) 1 NC_009831.1 KEGG: slo:Shew_0715 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 2608444 5612019 Ssed_2155 Shewanella sediminis HAW-EB3 cobalamin 5'-phosphate synthase YP_001473892.1 2607668 R 425104 CDS YP_001473893.1 157375293 5612020 complement(2608441..2609805) 1 NC_009831.1 KEGG: bxe:Bxe_B1656 CobB; hypothetical protein 2609805 5612020 Ssed_2156 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473893.1 2608441 R 425104 CDS YP_001473894.1 157375294 5612021 complement(2609805..2611262) 1 NC_009831.1 KEGG: vpa:VPA0932 cobyric acid synthase; cobyric acid synthase 2611262 5612021 Ssed_2157 Shewanella sediminis HAW-EB3 cobyric acid synthase YP_001473894.1 2609805 R 425104 CDS YP_001473895.1 157375295 5612022 complement(2611259..2612335) 1 NC_009831.1 KEGG: syn:sll1500 hypothetical protein; hypothetical protein 2612335 5612022 Ssed_2158 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473895.1 2611259 R 425104 CDS YP_001473896.1 157375296 5609663 complement(2612336..2612977) 1 NC_009831.1 KEGG: ppr:PBPRB0994 hypothetical protein; hypothetical protein 2612977 5609663 Ssed_2159 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473896.1 2612336 R 425104 CDS YP_001473897.1 157375297 5609664 complement(2612974..2613540) 1 NC_009831.1 KEGG: pen:PSEEN1384 cobinamide kinase; cobinamide phosphate guanylyltransferase CobU; cobinamide kinase; cobinamide phosphate guanylyltransferase CobU 2613540 5609664 Ssed_2160 Shewanella sediminis HAW-EB3 cobinamide kinase; cobinamide phosphate guanylyltransferase CobU YP_001473897.1 2612974 R 425104 CDS YP_001473898.1 157375298 5609665 complement(2613537..2614436) 1 NC_009831.1 KEGG: spc:Sputcn32_2947 periplasmic binding protein; periplasmic binding protein 2614436 5609665 Ssed_2161 Shewanella sediminis HAW-EB3 periplasmic binding protein YP_001473898.1 2613537 R 425104 CDS YP_001473899.1 157375299 5610003 complement(2614437..2614964) 1 NC_009831.1 KEGG: pfo:Pfl_1647 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 2614964 5610003 Ssed_2162 Shewanella sediminis HAW-EB3 cobalbumin biosynthesis protein YP_001473899.1 2614437 R 425104 CDS YP_001473900.1 157375300 5610004 complement(2614965..2615975) 1 NC_009831.1 KEGG: sdn:Sden_1117 transport system permease; transport system permease 2615975 5610004 Ssed_2163 Shewanella sediminis HAW-EB3 transport system permease YP_001473900.1 2614965 R 425104 CDS YP_001473901.1 157375301 5610005 complement(2615962..2616774) 1 NC_009831.1 KEGG: she:Shewmr4_0840 ABC transporter related; ABC transporter 2616774 5610005 Ssed_2164 Shewanella sediminis HAW-EB3 ABC transporter YP_001473901.1 2615962 R 425104 CDS YP_001473902.1 157375302 5610006 complement(2616832..2618682) 1 NC_009831.1 KEGG: cps:CPS_1162 TonB-dependent vitamin B12 receptor; TonB-dependent vitamin B12 receptor 2618682 5610006 Ssed_2165 Shewanella sediminis HAW-EB3 TonB-dependent vitamin B12 receptor YP_001473902.1 2616832 R 425104 CDS YP_001473903.1 157375303 5610971 complement(2619453..2622635) 1 NC_009831.1 KEGG: slo:Shew_2011 acriflavin resistance protein; acriflavin resistance protein 2622635 5610971 Ssed_2166 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001473903.1 2619453 R 425104 CDS YP_001473904.1 157375304 5610972 complement(2622639..2623829) 1 NC_009831.1 KEGG: sfr:Sfri_1930 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2623829 5610972 Ssed_2167 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001473904.1 2622639 R 425104 CDS YP_001473905.1 157375305 5610973 complement(2624216..2625214) 1 NC_009831.1 KEGG: sfr:Sfri_3610 hypothetical protein; hypothetical protein 2625214 5610973 Ssed_2168 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473905.1 2624216 R 425104 CDS YP_001473906.1 157375306 5610974 2625656..2626030 1 NC_009831.1 KEGG: pin:Ping_1384 hypothetical protein; hypothetical protein 2626030 5610974 Ssed_2169 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473906.1 2625656 D 425104 CDS YP_001473907.1 157375307 5610833 2626294..2626647 1 NC_009831.1 KEGG: ilo:IL1221 nitrogen regulatory protein PII; nitrogen regulatory protein PII 2626647 5610833 Ssed_2170 Shewanella sediminis HAW-EB3 nitrogen regulatory protein PII YP_001473907.1 2626294 D 425104 CDS YP_001473908.1 157375308 5610834 complement(2626778..2628031) 1 NC_009831.1 KEGG: she:Shewmr4_3210 DNA-directed DNA polymerase; DNA-directed DNA polymerase 2628031 5610834 Ssed_2171 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001473908.1 2626778 R 425104 CDS YP_001473909.1 157375309 5610835 complement(2628167..2628592) 1 NC_009831.1 KEGG: vvu:VV1_0390 SOS-response transcriptional repressor LexA -like protein; SOS-response transcriptional repressor LexA -like protein 2628592 5610835 Ssed_2172 Shewanella sediminis HAW-EB3 SOS-response transcriptional repressor LexA -like protein YP_001473909.1 2628167 R 425104 CDS YP_001473910.1 157375310 5610836 2628767..2629687 1 NC_009831.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 2629687 5610836 Ssed_2173 Shewanella sediminis HAW-EB3 manganese-dependent inorganic pyrophosphatase YP_001473910.1 2628767 D 425104 CDS YP_001473911.1 157375311 5613940 2629931..2631697 1 NC_009831.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2631697 5613940 Ssed_2174 Shewanella sediminis HAW-EB3 acetyl-CoA synthetase YP_001473911.1 2629931 D 425104 CDS YP_001473912.1 157375312 5613941 2631694..2632689 1 NC_009831.1 KEGG: pin:Ping_3601 pyruvate dehydrogenase (acetyl-transferring); pyruvate dehydrogenase (acetyl-transferring) 2632689 5613941 Ssed_2175 Shewanella sediminis HAW-EB3 pyruvate dehydrogenase (acetyl-transferring) YP_001473912.1 2631694 D 425104 CDS YP_001473913.1 157375313 5613942 2632686..2633669 1 NC_009831.1 KEGG: pin:Ping_3602 pyruvate dehydrogenase complex, E1 beta2 component; Pyruvate dehydrogenase E1 component subunit beta 2633669 5613942 Ssed_2176 Shewanella sediminis HAW-EB3 Pyruvate dehydrogenase E1 component subunit beta YP_001473913.1 2632686 D 425104 CDS YP_001473914.1 157375314 5613802 2633705..2634838 1 NC_009831.1 KEGG: gur:Gura_1611 catalytic domain of components of various dehydrogenase complexes; dehydrogenase catalytic domain-containing protein 2634838 5613802 Ssed_2177 Shewanella sediminis HAW-EB3 dehydrogenase catalytic domain-containing protein YP_001473914.1 2633705 D 425104 CDS YP_001473915.1 157375315 5613803 2634835..2635080 1 NC_009831.1 KEGG: pin:Ping_3604 phosphopantetheine-binding protein; phosphopantetheine-binding protein 2635080 5613803 Ssed_2178 Shewanella sediminis HAW-EB3 phosphopantetheine-binding protein YP_001473915.1 2634835 D 425104 CDS YP_001473916.1 157375316 5613804 2635321..2635761 1 NC_009831.1 KEGG: cps:CPS_2622 universal stress protein family; universal stress protein 2635761 5613804 Ssed_2179 Shewanella sediminis HAW-EB3 universal stress protein YP_001473916.1 2635321 D 425104 CDS YP_001473917.1 157375317 5613805 complement(2635886..2638309) 1 NC_009831.1 KEGG: slo:Shew_1976 ATP-dependent protease La-relatedprotein; ATP-dependent protease La-relatedprotein 2638309 5613805 Ssed_2180 Shewanella sediminis HAW-EB3 ATP-dependent protease La-relatedprotein YP_001473917.1 2635886 R 425104 CDS YP_001473918.1 157375318 5613377 complement(2638620..2639213) 1 NC_009831.1 KEGG: cps:CPS_0989 hypothetical protein; hypothetical protein 2639213 5613377 Ssed_2181 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473918.1 2638620 R 425104 CDS YP_001473919.1 157375319 5613378 2639520..2640437 1 NC_009831.1 KEGG: slo:Shew_1977 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 2640437 5613378 Ssed_2182 Shewanella sediminis HAW-EB3 PAS/PAC sensor-containing diguanylate cyclase YP_001473919.1 2639520 D 425104 CDS YP_001473920.1 157375320 5613379 2640602..2641267 1 NC_009831.1 KEGG: ppr:PBPRA1938 short-chain dehydrogenase; short-chain dehydrogenase 2641267 5613379 Ssed_2183 Shewanella sediminis HAW-EB3 short-chain dehydrogenase YP_001473920.1 2640602 D 425104 CDS YP_001473921.1 157375321 5613380 complement(2641354..2643117) 1 NC_009831.1 KEGG: shn:Shewana3_3690 cytochrome c; hypothetical protein 2643117 5613380 Ssed_2184 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473921.1 2641354 R 425104 CDS YP_001473922.1 157375322 5613373 complement(2645827..2646009) 1 NC_009831.1 KEGG: cps:CPS_3943 hypothetical protein; hypothetical protein 2646009 5613373 Ssed_2185 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473922.1 2645827 R 425104 CDS YP_001473923.1 157375323 5613374 2646655..2647257 1 NC_009831.1 KEGG: abo:ABO_1331 hydrolase; hydrolase 2647257 5613374 Ssed_2186 Shewanella sediminis HAW-EB3 hydrolase YP_001473923.1 2646655 D 425104 CDS YP_001473924.1 157375324 5613375 complement(2647605..2647919) 1 NC_009831.1 hypothetical protein 2647919 5613375 Ssed_2187 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473924.1 2647605 R 425104 CDS YP_001473925.1 157375325 5613376 complement(2648346..2648759) 1 NC_009831.1 KEGG: slo:Shew_2598 hypothetical protein; hypothetical protein 2648759 5613376 Ssed_2188 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473925.1 2648346 R 425104 CDS YP_001473926.1 157375326 5613336 2648934..2649269 1 NC_009831.1 KEGG: slo:Shew_2599 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 2649269 5613336 Ssed_2189 Shewanella sediminis HAW-EB3 HxlR family transcriptional regulator YP_001473926.1 2648934 D 425104 CDS YP_001473927.1 157375327 5613337 2650865..2651131 1 NC_009831.1 hypothetical protein 2651131 5613337 Ssed_2190 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473927.1 2650865 D 425104 CDS YP_001473928.1 157375328 5613338 2651277..2651534 1 NC_009831.1 KEGG: vvy:VVA0847 hypothetical protein; hypothetical protein 2651534 5613338 Ssed_2191 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473928.1 2651277 D 425104 CDS YP_001473929.1 157375329 5613264 2651696..2653519 1 NC_009831.1 KEGG: ppr:PBPRB0950 hypothetical protein; hypothetical protein 2653519 5613264 Ssed_2192 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473929.1 2651696 D 425104 CDS YP_001473930.1 157375330 5613265 2654110..2654388 1 NC_009831.1 hypothetical protein 2654388 5613265 Ssed_2193 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473930.1 2654110 D 425104 CDS YP_001473931.1 157375331 5613266 2654370..2654732 1 NC_009831.1 hypothetical protein 2654732 5613266 Ssed_2194 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473931.1 2654370 D 425104 CDS YP_001473932.1 157375332 5613267 2654733..2655314 1 NC_009831.1 hypothetical protein 2655314 5613267 Ssed_2195 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473932.1 2654733 D 425104 CDS YP_001473933.1 157375333 5613207 2655292..2655993 1 NC_009831.1 KEGG: vpa:VPA0903 hypothetical protein; hypothetical protein 2655993 5613207 Ssed_2196 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473933.1 2655292 D 425104 CDS YP_001473934.1 157375334 5613208 2656343..2657161 1 NC_009831.1 KEGG: mfa:Mfla_0971 hypothetical protein; hypothetical protein 2657161 5613208 Ssed_2197 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473934.1 2656343 D 425104 CDS YP_001473935.1 157375335 5613209 2657172..2657477 1 NC_009831.1 hypothetical protein 2657477 5613209 Ssed_2198 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473935.1 2657172 D 425104 CDS YP_001473936.1 157375336 5613210 2657757..2658122 1 NC_009831.1 hypothetical protein 2658122 5613210 Ssed_2199 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473936.1 2657757 D 425104 CDS YP_001473937.1 157375337 5613167 2658122..2658913 1 NC_009831.1 hypothetical protein 2658913 5613167 Ssed_2200 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473937.1 2658122 D 425104 CDS YP_001473938.1 157375338 5613168 2658910..2660418 1 NC_009831.1 hypothetical protein 2660418 5613168 Ssed_2201 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473938.1 2658910 D 425104 CDS YP_001473939.1 157375339 5613169 2660418..2661041 1 NC_009831.1 KEGG: aav:Aave_2357 hypothetical protein; hypothetical protein 2661041 5613169 Ssed_2202 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473939.1 2660418 D 425104 CDS YP_001473940.1 157375340 5613170 2661016..2661372 1 NC_009831.1 KEGG: vvu:VV2_0287 hypothetical protein; hypothetical protein 2661372 5613170 Ssed_2203 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473940.1 2661016 D 425104 CDS YP_001473941.1 157375341 5613075 2661416..2661742 1 NC_009831.1 hypothetical protein 2661742 5613075 Ssed_2204 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473941.1 2661416 D 425104 CDS YP_001473942.1 157375342 5613076 2662296..2662955 1 NC_009831.1 KEGG: sty:STY3192 hypothetical protein; hypothetical protein 2662955 5613076 Ssed_2205 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473942.1 2662296 D 425104 CDS YP_001473943.1 157375343 5613077 complement(2663053..2663538) 1 NC_009831.1 hypothetical protein 2663538 5613077 Ssed_2206 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473943.1 2663053 R 425104 CDS YP_001473944.1 157375344 5613144 complement(2664796..2666088) 1 NC_009831.1 KEGG: she:Shewmr4_2002 phage integrase family protein; phage integrase family protein 2666088 5613144 Ssed_2207 Shewanella sediminis HAW-EB3 phage integrase family protein YP_001473944.1 2664796 R 425104 CDS YP_001473945.1 157375345 5613145 complement(2666280..2666567) 1 NC_009831.1 KEGG: shm:Shewmr7_1972 hypothetical protein; hypothetical protein 2666567 5613145 Ssed_2208 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473945.1 2666280 R 425104 CDS YP_001473946.1 157375346 5613146 2666770..2668350 1 NC_009831.1 KEGG: slo:Shew_1983 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 2668350 5613146 Ssed_2209 Shewanella sediminis HAW-EB3 response regulator receiver modulated metal dependent phosphohydrolase YP_001473946.1 2666770 D 425104 CDS YP_001473947.1 157375347 5613147 complement(2668465..2668890) 1 NC_009831.1 KEGG: shn:Shewana3_2106 hypothetical protein; hypothetical protein 2668890 5613147 Ssed_2210 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473947.1 2668465 R 425104 CDS YP_001473948.1 157375348 5613120 2669201..2670628 1 NC_009831.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 2670628 5613120 Ssed_2211 Shewanella sediminis HAW-EB3 cbb3-type cytochrome c oxidase subunit I YP_001473948.1 2669201 D 425104 CDS YP_001473949.1 157375349 5613121 2670641..2671267 1 NC_009831.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 2671267 5613121 Ssed_2212 Shewanella sediminis HAW-EB3 cbb3-type cytochrome c oxidase subunit II YP_001473949.1 2670641 D 425104 CDS YP_001473950.1 157375350 5613122 2671283..2671450 1 NC_009831.1 KEGG: slo:Shew_1987 Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit 2671450 5613122 Ssed_2213 Shewanella sediminis HAW-EB3 cbb3-type cytochrome oxidase subunit YP_001473950.1 2671283 D 425104 CDS YP_001473951.1 157375351 5613123 2671450..2672418 1 NC_009831.1 KEGG: slo:Shew_1988 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase, cbb3-type subunit III 2672418 5613123 Ssed_2214 Shewanella sediminis HAW-EB3 cytochrome c oxidase, cbb3-type subunit III YP_001473951.1 2671450 D 425104 CDS YP_001473952.1 157375352 5612872 2672529..2673008 1 NC_009831.1 KEGG: slo:Shew_1989 hypothetical protein; hypothetical protein 2673008 5612872 Ssed_2215 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473952.1 2672529 D 425104 CDS YP_001473953.1 157375353 5612873 2673026..2675404 1 NC_009831.1 KEGG: slo:Shew_1990 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2675404 5612873 Ssed_2216 Shewanella sediminis HAW-EB3 heavy metal translocating P-type ATPase YP_001473953.1 2673026 D 425104 CDS YP_001473954.1 157375354 5612874 2675401..2675586 1 NC_009831.1 KEGG: slo:Shew_1991 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 2675586 5612874 Ssed_2217 Shewanella sediminis HAW-EB3 cbb3-type cytochrome oxidase maturation protein YP_001473954.1 2675401 D 425104 CDS YP_001473955.1 157375355 5612875 2675583..2676275 1 NC_009831.1 KEGG: slo:Shew_1992 hypothetical protein; hypothetical protein 2676275 5612875 Ssed_2218 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473955.1 2675583 D 425104 CDS YP_001473956.1 157375356 5612762 2676331..2677080 1 NC_009831.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2677080 5612762 Ssed_2219 Shewanella sediminis HAW-EB3 fumarate/nitrate reduction transcriptional regulator YP_001473956.1 2676331 D 425104 CDS YP_001473957.1 157375357 5612763 2677419..2678351 1 NC_009831.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2678351 5612763 Ssed_2220 Shewanella sediminis HAW-EB3 universal stress protein UspE YP_001473957.1 2677419 D 425104 CDS YP_001473958.1 157375358 5612764 2678431..2679381 1 NC_009831.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2679381 5612764 Ssed_2221 Shewanella sediminis HAW-EB3 C32 tRNA thiolase YP_001473958.1 2678431 D 425104 CDS YP_001473959.1 157375359 5612631 complement(2679494..2680120) 1 NC_009831.1 KEGG: slo:Shew_1996 hypothetical protein; hypothetical protein 2680120 5612631 Ssed_2222 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473959.1 2679494 R 425104 CDS YP_001473960.1 157375360 5612632 complement(2680098..2680925) 1 NC_009831.1 KEGG: slo:Shew_1997 Bax protein; Bax protein 2680925 5612632 Ssed_2223 Shewanella sediminis HAW-EB3 Bax protein YP_001473960.1 2680098 R 425104 CDS YP_001473961.1 157375361 5612633 2681062..2681961 1 NC_009831.1 KEGG: slo:Shew_1998 protein of unknown function UPF0052 and CofD; hypothetical protein 2681961 5612633 Ssed_2224 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473961.1 2681062 D 425104 CDS YP_001473962.1 157375362 5612634 complement(2682061..2683257) 1 NC_009831.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2683257 5612634 Ssed_2225 Shewanella sediminis HAW-EB3 aromatic amino acid aminotransferase YP_001473962.1 2682061 R 425104 CDS YP_001473963.1 157375363 5610089 complement(2685384..2686823) 1 NC_009831.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 2686823 5610089 Ssed_2226 Shewanella sediminis HAW-EB3 glyceraldehyde-3-phosphate dehydrogenase YP_001473963.1 2685384 R 425104 CDS YP_001473964.1 157375364 5612590 2687047..2687877 1 NC_009831.1 KEGG: slo:Shew_2001 hypothetical protein; hypothetical protein 2687877 5612590 Ssed_2227 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473964.1 2687047 D 425104 CDS YP_001473965.1 157375365 5612591 2688299..2689309 1 NC_009831.1 KEGG: slo:Shew_2002 glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 2689309 5612591 Ssed_2228 Shewanella sediminis HAW-EB3 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) YP_001473965.1 2688299 D 425104 CDS YP_001473966.1 157375366 5612592 complement(2689445..2690848) 1 NC_009831.1 KEGG: asa:ASA_4003 GGDEF domain protein; diguanylate cyclase 2690848 5612592 Ssed_2229 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001473966.1 2689445 R 425104 CDS YP_001473967.1 157375367 5612363 2691243..2691713 1 NC_009831.1 KEGG: sfr:Sfri_0957 bacterioferritin; bacterioferritin 2691713 5612363 Ssed_2230 Shewanella sediminis HAW-EB3 bacterioferritin YP_001473967.1 2691243 D 425104 CDS YP_001473968.1 157375368 5612364 2691715..2692197 1 NC_009831.1 KEGG: slo:Shew_2872 bacterioferritin; bacterioferritin 2692197 5612364 Ssed_2231 Shewanella sediminis HAW-EB3 bacterioferritin YP_001473968.1 2691715 D 425104 CDS YP_001473969.1 157375369 5612365 complement(2692328..2692717) 1 NC_009831.1 KEGG: pnu:Pnuc_1464 hypothetical protein; hypothetical protein 2692717 5612365 Ssed_2232 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473969.1 2692328 R 425104 CDS YP_001473970.1 157375370 5612366 complement(2692972..2693247) 1 NC_009831.1 KEGG: slo:Shew_2004 hypothetical protein; hypothetical protein 2693247 5612366 Ssed_2233 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473970.1 2692972 R 425104 CDS YP_001473971.1 157375371 5612389 2693425..2694558 1 NC_009831.1 KEGG: sit:TM1040_3572 spermidine/putrescine-binding periplasmic protein-like; spermidine/putrescine-binding periplasmic protein-like protein 2694558 5612389 Ssed_2234 Shewanella sediminis HAW-EB3 spermidine/putrescine-binding periplasmic protein-like protein YP_001473971.1 2693425 D 425104 CDS YP_001473972.1 157375372 5612390 complement(2694574..2695917) 1 NC_009831.1 KEGG: sfr:Sfri_0489 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2695917 5612390 Ssed_2235 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001473972.1 2694574 R 425104 CDS YP_001473973.1 157375373 5612391 complement(2695933..2696484) 1 NC_009831.1 KEGG: slo:Shew_2006 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2696484 5612391 Ssed_2236 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001473973.1 2695933 R 425104 CDS YP_001473974.1 157375374 5612221 2696691..2698388 1 NC_009831.1 KEGG: sus:Acid_1539 MutT/NUDIX family protein; MutT/NUDIX family protein 2698388 5612221 Ssed_2237 Shewanella sediminis HAW-EB3 MutT/NUDIX family protein YP_001473974.1 2696691 D 425104 CDS YP_001473975.1 157375375 5612222 2698600..2699658 1 NC_009831.1 KEGG: slo:Shew_2007 hypothetical protein; hypothetical protein 2699658 5612222 Ssed_2238 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473975.1 2698600 D 425104 CDS YP_001473976.1 157375376 5612223 complement(2699729..2700424) 1 NC_009831.1 KEGG: vfi:VF1658 short chain dehydrogenase; short chain dehydrogenase 2700424 5612223 Ssed_2239 Shewanella sediminis HAW-EB3 short chain dehydrogenase YP_001473976.1 2699729 R 425104 CDS YP_001473977.1 157375377 5612224 complement(2700473..2700877) 1 NC_009831.1 KEGG: pat:Patl_3326 orphan protein; hypothetical protein 2700877 5612224 Ssed_2240 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473977.1 2700473 R 425104 CDS YP_001473978.1 157375378 5612287 2701332..2702381 1 NC_009831.1 KEGG: dre:797003 hypothetical protein LOC797003; hypothetical protein 2702381 5612287 Ssed_2241 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473978.1 2701332 D 425104 CDS YP_001473979.1 157375379 5612288 2702898..2703872 1 NC_009831.1 KEGG: aha:AHA_1230 ABC-type sugar transport system, ATPase component; sugar ABC transporter ATPase 2703872 5612288 Ssed_2242 Shewanella sediminis HAW-EB3 sugar ABC transporter ATPase YP_001473979.1 2702898 D 425104 CDS YP_001473980.1 157375380 5612289 complement(2703964..2704488) 1 NC_009831.1 KEGG: sbl:Sbal_2095 hypothetical protein; hypothetical protein 2704488 5612289 Ssed_2243 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473980.1 2703964 R 425104 CDS YP_001473981.1 157375381 5612290 2705314..2706456 1 NC_009831.1 KEGG: shm:Shewmr7_2033 phage integrase family protein; phage integrase family protein 2706456 5612290 Ssed_2244 Shewanella sediminis HAW-EB3 phage integrase family protein YP_001473981.1 2705314 D 425104 CDS YP_001473982.1 157375382 5612090 complement(2706535..2708325) 1 NC_009831.1 KEGG: swi:Swit_2059 amidohydrolase 3; amidohydrolase 3 2708325 5612090 Ssed_2245 Shewanella sediminis HAW-EB3 amidohydrolase 3 YP_001473982.1 2706535 R 425104 CDS YP_001473983.1 157375383 5612091 complement(2708472..2709518) 1 NC_009831.1 KEGG: swi:Swit_4355 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2709518 5612091 Ssed_2246 Shewanella sediminis HAW-EB3 aminoglycoside phosphotransferase YP_001473983.1 2708472 R 425104 CDS YP_001473984.1 157375384 5612092 complement(2709554..2710786) 1 NC_009831.1 KEGG: msm:MSMEG_0277 aminotransferase; aminotransferase 2710786 5612092 Ssed_2247 Shewanella sediminis HAW-EB3 aminotransferase YP_001473984.1 2709554 R 425104 CDS YP_001473985.1 157375385 5612093 complement(2710844..2713177) 1 NC_009831.1 KEGG: swi:Swit_4129 TonB-dependent receptor; TonB-dependent receptor 2713177 5612093 Ssed_2248 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001473985.1 2710844 R 425104 CDS YP_001473986.1 157375386 5611954 2713427..2714071 1 NC_009831.1 KEGG: swi:Swit_3257 transcriptional regulator, TetR family; TetR family transcriptional regulator 2714071 5611954 Ssed_2249 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001473986.1 2713427 D 425104 CDS YP_001473987.1 157375387 5611955 complement(2714213..2714929) 1 NC_009831.1 KEGG: sfr:Sfri_3001 pseudouridine synthase; pseudouridine synthase 2714929 5611955 Ssed_2250 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001473987.1 2714213 R 425104 CDS YP_001473988.1 157375388 5611956 2715165..2715548 1 NC_009831.1 hypothetical protein 2715548 5611956 Ssed_2251 Shewanella sediminis HAW-EB3 hypothetical protein YP_001473988.1 2715165 D 425104 CDS YP_001473989.1 157375389 5611892 complement(2715661..2716023) 1 NC_009831.1 KEGG: rfr:Rfer_2228 globin; globin 2716023 5611892 Ssed_2252 Shewanella sediminis HAW-EB3 globin YP_001473989.1 2715661 R 425104 CDS YP_001473990.1 157375390 5611893 complement(2716270..2717502) 1 NC_009831.1 KEGG: pnu:Pnuc_1086 patatin; patatin 2717502 5611893 Ssed_2253 Shewanella sediminis HAW-EB3 patatin YP_001473990.1 2716270 R 425104 CDS YP_001473991.1 157375391 5611894 2718274..2719542 1 NC_009831.1 KEGG: cps:CPS_1325 sensory box/GGDEF domain protein; sensory box protein 2719542 5611894 Ssed_2254 Shewanella sediminis HAW-EB3 sensory box protein YP_001473991.1 2718274 D 425104 CDS YP_001473992.1 157375392 5611895 complement(2719824..2722886) 1 NC_009831.1 KEGG: sbl:Sbal_3941 UvrD/REP helicase; UvrD/REP helicase 2722886 5611895 Ssed_2255 Shewanella sediminis HAW-EB3 UvrD/REP helicase YP_001473992.1 2719824 R 425104 CDS YP_001473993.1 157375393 5611863 complement(2723406..2724185) 1 NC_009831.1 KEGG: sfv:SFV_0855 regulator; negative regulator of beta-lactamase expression-like protein 2724185 5611863 Ssed_2256 Shewanella sediminis HAW-EB3 negative regulator of beta-lactamase expression-like protein YP_001473993.1 2723406 R 425104 CDS YP_001473994.1 157375394 5611864 complement(2724481..2725734) 1 NC_009831.1 KEGG: pmy:Pmen_1267 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2725734 5611864 Ssed_2257 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001473994.1 2724481 R 425104 CDS YP_001473995.1 157375395 5611865 complement(2726434..2727324) 1 NC_009831.1 KEGG: vfi:VF1063 transcriptional regulator; transcriptional regulator 2727324 5611865 Ssed_2258 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001473995.1 2726434 R 425104 CDS YP_001473996.1 157375396 5611866 2727459..2728715 1 NC_009831.1 KEGG: vfi:VF1062 adenylosuccinate synthetase; adenylosuccinate synthetase 2728715 5611866 Ssed_2259 Shewanella sediminis HAW-EB3 adenylosuccinate synthetase YP_001473996.1 2727459 D 425104 CDS YP_001473997.1 157375397 5611896 complement(2729564..2730622) 1 NC_009831.1 KEGG: sde:Sde_2820 hypothetical protein; iron-regulated membrane protein-like protein 2730622 5611896 Ssed_2260 Shewanella sediminis HAW-EB3 iron-regulated membrane protein-like protein YP_001473997.1 2729564 R 425104 CDS YP_001473998.1 157375398 5611897 2731877..2732692 1 NC_009831.1 KEGG: hch:HCH_00100 predicted sulfurtransferase; sulfurtransferase 2732692 5611897 Ssed_2261 Shewanella sediminis HAW-EB3 sulfurtransferase YP_001473998.1 2731877 D 425104 CDS YP_001473999.1 157375399 5611898 2732878..2734032 1 NC_009831.1 KEGG: ppr:PBPRB1412 hypothetical glucose dehydrogenase; glucose dehydrogenase 2734032 5611898 Ssed_2262 Shewanella sediminis HAW-EB3 glucose dehydrogenase YP_001473999.1 2732878 D 425104 CDS YP_001474000.1 157375400 5611899 complement(2734272..2735948) 1 NC_009831.1 KEGG: sfr:Sfri_1606 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 2735948 5611899 Ssed_2263 Shewanella sediminis HAW-EB3 AMP-dependent synthetase/ligase YP_001474000.1 2734272 R 425104 CDS YP_001474001.1 157375401 5611813 complement(2736662..2737786) 1 NC_009831.1 KEGG: sbl:Sbal_2120 HNH nuclease; HNH nuclease 2737786 5611813 Ssed_2264 Shewanella sediminis HAW-EB3 HNH nuclease YP_001474001.1 2736662 R 425104 CDS YP_001474002.1 157375402 5611814 complement(2737783..2738469) 1 NC_009831.1 KEGG: sbl:Sbal_2119 methyltransferase type 12; type 12 methyltransferase 2738469 5611814 Ssed_2265 Shewanella sediminis HAW-EB3 type 12 methyltransferase YP_001474002.1 2737783 R 425104 CDS YP_001474003.1 157375403 5611815 complement(2738810..2740591) 1 NC_009831.1 KEGG: rpa:RPA1904 DUF262; hypothetical protein 2740591 5611815 Ssed_2266 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474003.1 2738810 R 425104 CDS YP_001474004.1 157375404 5611776 complement(2740758..2741033) 1 NC_009831.1 KEGG: spc:Sputcn32_2923 hypothetical protein; hypothetical protein 2741033 5611776 Ssed_2267 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474004.1 2740758 R 425104 CDS YP_001474005.1 157375405 5611777 complement(2741100..2742089) 1 NC_009831.1 KEGG: pin:Ping_2477 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1 2742089 5611777 Ssed_2268 Shewanella sediminis HAW-EB3 ADP-ribosylation/crystallin J1 YP_001474005.1 2741100 R 425104 CDS YP_001474006.1 157375406 5611778 complement(2742314..2742775) 1 NC_009831.1 hypothetical protein 2742775 5611778 Ssed_2269 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474006.1 2742314 R 425104 CDS YP_001474007.1 157375407 5611779 complement(2742765..2744129) 1 NC_009831.1 KEGG: shn:Shewana3_1831 hypothetical protein; hypothetical protein 2744129 5611779 Ssed_2270 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474007.1 2742765 R 425104 CDS YP_001474008.1 157375408 5611651 complement(2744155..2744553) 1 NC_009831.1 hypothetical protein 2744553 5611651 Ssed_2271 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474008.1 2744155 R 425104 CDS YP_001474009.1 157375409 5611652 complement(2744788..2745567) 1 NC_009831.1 KEGG: ppr:PBPRA1449 conserved hypothetical protein; hypothetical protein 2745567 5611652 Ssed_2272 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474009.1 2744788 R 425104 CDS YP_001474010.1 157375410 5611653 complement(2745709..2749302) 1 NC_009831.1 KEGG: ppr:PBPRA1988 pyruvate oxidoreductase; pyruvate oxidoreductase 2749302 5611653 Ssed_2273 Shewanella sediminis HAW-EB3 pyruvate oxidoreductase YP_001474010.1 2745709 R 425104 CDS YP_001474011.1 157375411 5611654 complement(2749344..2750972) 1 NC_009831.1 unknown function; glutamate synthase (NADPH) small subunit 2750972 5611654 Ssed_2274 Shewanella sediminis HAW-EB3 glutamate synthase (NADPH) small subunit YP_001474011.1 2749344 R 425104 CDS YP_001474012.1 157375412 5611749 complement(2751280..2752308) 1 NC_009831.1 KEGG: she:Shewmr4_2086 hypothetical protein; hypothetical protein 2752308 5611749 Ssed_2275 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474012.1 2751280 R 425104 CDS YP_001474013.1 157375413 5611750 2752889..2753632 1 NC_009831.1 KEGG: sfr:Sfri_0271 hypothetical protein; hypothetical protein 2753632 5611750 Ssed_2276 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474013.1 2752889 D 425104 CDS YP_001474014.1 157375414 5611751 2753629..2755548 1 NC_009831.1 KEGG: ilo:IL1226 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF 2755548 5611751 Ssed_2277 Shewanella sediminis HAW-EB3 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF YP_001474014.1 2753629 D 425104 CDS YP_001474015.1 157375415 5611752 complement(2755703..2756743) 1 NC_009831.1 KEGG: slo:Shew_1973 porin, gram-negative type; porin 2756743 5611752 Ssed_2278 Shewanella sediminis HAW-EB3 porin YP_001474015.1 2755703 R 425104 CDS YP_001474016.1 157375416 5611575 complement(2756824..2758170) 1 NC_009831.1 KEGG: slo:Shew_1972 FMN-binding domain protein; FMN-binding domain-containing protein 2758170 5611575 Ssed_2279 Shewanella sediminis HAW-EB3 FMN-binding domain-containing protein YP_001474016.1 2756824 R 425104 CDS YP_001474017.1 157375417 5611576 2758517..2759635 1 NC_009831.1 KEGG: slo:Shew_1971 ApbE family lipoprotein; ApbE family lipoprotein 2759635 5611576 Ssed_2280 Shewanella sediminis HAW-EB3 ApbE family lipoprotein YP_001474017.1 2758517 D 425104 CDS YP_001474018.1 157375418 5611577 2760044..2761720 1 NC_009831.1 KEGG: slo:Shew_1970 histidine kinase; histidine kinase 2761720 5611577 Ssed_2281 Shewanella sediminis HAW-EB3 histidine kinase YP_001474018.1 2760044 D 425104 CDS YP_001474019.1 157375419 5611511 2761713..2762312 1 NC_009831.1 KEGG: slo:Shew_1969 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2762312 5611511 Ssed_2282 Shewanella sediminis HAW-EB3 two component LuxR family transcriptional regulator YP_001474019.1 2761713 D 425104 CDS YP_001474020.1 157375420 5611512 complement(2762917..2764422) 1 NC_009831.1 KEGG: shn:Shewana3_1994 outer membrane efflux protein; outer membrane efflux protein 2764422 5611512 Ssed_2283 Shewanella sediminis HAW-EB3 outer membrane efflux protein YP_001474020.1 2762917 R 425104 CDS YP_001474021.1 157375421 5611513 complement(2764422..2767589) 1 NC_009831.1 KEGG: shn:Shewana3_1993 acriflavin resistance protein; acriflavin resistance protein 2767589 5611513 Ssed_2284 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001474021.1 2764422 R 425104 CDS YP_001474022.1 157375422 5611514 complement(2767589..2768875) 1 NC_009831.1 KEGG: she:Shewmr4_1939 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2768875 5611514 Ssed_2285 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001474022.1 2767589 R 425104 CDS YP_001474023.1 157375423 5611493 complement(2769241..2769984) 1 NC_009831.1 KEGG: slo:Shew_1966 DTW domain containing protein; DTW domain-containing protein 2769984 5611493 Ssed_2286 Shewanella sediminis HAW-EB3 DTW domain-containing protein YP_001474023.1 2769241 R 425104 CDS YP_001474024.1 157375424 5611494 2770648..2771874 1 NC_009831.1 multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D 2771874 emrD 5611494 emrD Shewanella sediminis HAW-EB3 multidrug resistance protein D YP_001474024.1 2770648 D 425104 CDS YP_001474025.1 157375425 5611495 complement(2772391..2773704) 1 NC_009831.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 2773704 pssA 5611495 pssA Shewanella sediminis HAW-EB3 phosphatidylserine synthase YP_001474025.1 2772391 R 425104 CDS YP_001474026.1 157375426 5611496 complement(2773716..2774048) 1 NC_009831.1 KEGG: sbl:Sbal_2080 hypothetical protein; hypothetical protein 2774048 5611496 Ssed_2289 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474026.1 2773716 R 425104 CDS YP_001474027.1 157375427 5611476 2774408..2774581 1 NC_009831.1 KEGG: shn:Shewana3_1986 hypothetical protein; hypothetical protein 2774581 5611476 Ssed_2290 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474027.1 2774408 D 425104 CDS YP_001474028.1 157375428 5611477 2774783..2776240 1 NC_009831.1 KEGG: spc:Sputcn32_2034 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; serine-type D-Ala-D-Ala carboxypeptidase 2776240 5611477 Ssed_2291 Shewanella sediminis HAW-EB3 serine-type D-Ala-D-Ala carboxypeptidase YP_001474028.1 2774783 D 425104 CDS YP_001474029.1 157375429 5611478 complement(2776424..2778181) 1 NC_009831.1 KEGG: slo:Shew_1961 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 2778181 5611478 Ssed_2292 Shewanella sediminis HAW-EB3 acyl-CoA dehydrogenase YP_001474029.1 2776424 R 425104 CDS YP_001474030.1 157375430 5611479 complement(2778421..2778963) 1 NC_009831.1 KEGG: slo:Shew_1960 hypothetical protein; hypothetical protein 2778963 5611479 Ssed_2293 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474030.1 2778421 R 425104 CDS YP_001474031.1 157375431 5611043 complement(2779074..2779778) 1 NC_009831.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2779778 5611043 Ssed_2294 Shewanella sediminis HAW-EB3 orotidine 5'-phosphate decarboxylase YP_001474031.1 2779074 R 425104 CDS YP_001474032.1 157375432 5611044 complement(2779883..2781043) 1 NC_009831.1 KEGG: slo:Shew_1957 hypothetical protein; hypothetical protein 2781043 5611044 Ssed_2295 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474032.1 2779883 R 425104 CDS YP_001474033.1 157375433 5611045 complement(2781045..2781335) 1 NC_009831.1 KEGG: slo:Shew_1956 protein of unknown function DUF1049; hypothetical protein 2781335 5611045 Ssed_2296 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474033.1 2781045 R 425104 CDS YP_001474034.1 157375434 5611063 complement(2781458..2781745) 1 NC_009831.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2781745 ihfB 5611063 ihfB Shewanella sediminis HAW-EB3 integration host factor subunit beta YP_001474034.1 2781458 R 425104 CDS YP_001474035.1 157375435 5611064 complement(2781817..2783484) 1 NC_009831.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2783484 rpsA 5611064 rpsA Shewanella sediminis HAW-EB3 30S ribosomal protein S1 YP_001474035.1 2781817 R 425104 CDS YP_001474036.1 157375436 5611065 complement(2783587..2784279) 1 NC_009831.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2784279 cmk 5611065 cmk Shewanella sediminis HAW-EB3 cytidylate kinase YP_001474036.1 2783587 R 425104 CDS YP_001474037.1 157375437 5611066 complement(2784568..2785848) 1 NC_009831.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2785848 5611066 Ssed_2300 Shewanella sediminis HAW-EB3 3-phosphoshikimate 1-carboxyvinyltransferase YP_001474037.1 2784568 R 425104 CDS YP_001474038.1 157375438 5611113 2786298..2787503 1 NC_009831.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2787503 5611113 Ssed_2301 Shewanella sediminis HAW-EB3 aromatic amino acid aminotransferase YP_001474038.1 2786298 D 425104 CDS YP_001474039.1 157375439 5611114 complement(2787554..2788648) 1 NC_009831.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2788648 5611114 Ssed_2302 Shewanella sediminis HAW-EB3 phosphoserine aminotransferase YP_001474039.1 2787554 R 425104 CDS YP_001474040.1 157375440 5611115 complement(2788824..2791538) 1 NC_009831.1 KEGG: shw:Sputw3181_1942 DNA gyrase, A subunit; DNA topoisomerase 2791538 5611115 Ssed_2303 Shewanella sediminis HAW-EB3 DNA topoisomerase YP_001474040.1 2788824 R 425104 CDS YP_001474041.1 157375441 5611116 2791824..2792549 1 NC_009831.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2792549 5611116 Ssed_2304 Shewanella sediminis HAW-EB3 3-demethylubiquinone-9 3-methyltransferase YP_001474041.1 2791824 D 425104 CDS YP_001474042.1 157375442 5613472 2792550..2793254 1 NC_009831.1 KEGG: she:Shewmr4_1917 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 2793254 5613472 Ssed_2305 Shewanella sediminis HAW-EB3 HAD family hydrolase YP_001474042.1 2792550 D 425104 CDS YP_001474043.1 157375443 5613473 2793669..2795957 1 NC_009831.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2795957 5613473 Ssed_2306 Shewanella sediminis HAW-EB3 ribonucleotide-diphosphate reductase subunit alpha YP_001474043.1 2793669 D 425104 CDS YP_001474044.1 157375444 5613474 2796104..2797234 1 NC_009831.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 2797234 nrdB 5613474 nrdB Shewanella sediminis HAW-EB3 ribonucleotide-diphosphate reductase subunit beta YP_001474044.1 2796104 D 425104 CDS YP_001474045.1 157375445 5613475 2797218..2797568 1 NC_009831.1 KEGG: slo:Shew_1944 ferredoxin; ferredoxin 2797568 5613475 Ssed_2308 Shewanella sediminis HAW-EB3 ferredoxin YP_001474045.1 2797218 D 425104 CDS YP_001474046.1 157375446 5612068 2797887..2799530 1 NC_009831.1 KEGG: aha:AHA_3197 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein-like protein 2799530 5612068 Ssed_2309 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein-like protein YP_001474046.1 2797887 D 425104 CDS YP_001474047.1 157375447 5612069 complement(2799628..2801643) 1 NC_009831.1 KEGG: she:Shewmr4_1910 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2801643 5612069 Ssed_2310 Shewanella sediminis HAW-EB3 NADH:flavin oxidoreductase YP_001474047.1 2799628 R 425104 CDS YP_001474048.1 157375448 5612070 2801807..2803645 1 NC_009831.1 KEGG: slo:Shew_1941 signal peptide peptidase SppA, 67K type; acid phosphatase 2803645 5612070 Ssed_2311 Shewanella sediminis HAW-EB3 acid phosphatase YP_001474048.1 2801807 D 425104 CDS YP_001474049.1 157375449 5611121 2803811..2804824 1 NC_009831.1 converts asparagine to aspartate and ammonia; asparaginase 2804824 ansA 5611121 ansA Shewanella sediminis HAW-EB3 asparaginase YP_001474049.1 2803811 D 425104 CDS YP_001474050.1 157375450 5611122 complement(2804996..2805277) 1 NC_009831.1 KEGG: slo:Shew_1939 protein of unknown function DUF1315; hypothetical protein 2805277 5611122 Ssed_2313 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474050.1 2804996 R 425104 CDS YP_001474051.1 157375451 5611123 complement(2805274..2805591) 1 NC_009831.1 KEGG: slo:Shew_1938 hypothetical protein; hypothetical protein 2805591 5611123 Ssed_2314 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474051.1 2805274 R 425104 CDS YP_001474052.1 157375452 5611124 complement(2805664..2806791) 1 NC_009831.1 KEGG: slo:Shew_1937 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 2806791 5611124 Ssed_2315 Shewanella sediminis HAW-EB3 peptidase M14, carboxypeptidase A YP_001474052.1 2805664 R 425104 CDS YP_001474053.1 157375453 5610962 complement(2807019..2807699) 1 NC_009831.1 KEGG: saz:Sama_1718 response regulator receiver protein; response regulator receiver protein 2807699 5610962 Ssed_2316 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001474053.1 2807019 R 425104 CDS YP_001474054.1 157375454 5610963 complement(2807920..2809698) 1 NC_009831.1 KEGG: slo:Shew_1935 protein of unknown function DUF885; hypothetical protein 2809698 5610963 Ssed_2317 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474054.1 2807920 R 425104 CDS YP_001474055.1 157375455 5610964 complement(2809881..2811827) 1 NC_009831.1 KEGG: pin:Ping_3396 23S rRNA (Gm2251)-methyltransferase; 23S rRNA Gm2251-methyltransferase 2811827 5610964 Ssed_2318 Shewanella sediminis HAW-EB3 23S rRNA Gm2251-methyltransferase YP_001474055.1 2809881 R 425104 CDS YP_001474056.1 157375456 5610965 complement(2812011..2812865) 1 NC_009831.1 KEGG: slo:Shew_1933 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 2812865 5610965 Ssed_2319 Shewanella sediminis HAW-EB3 endonuclease/exonuclease/phosphatase YP_001474056.1 2812011 R 425104 CDS YP_001474057.1 157375457 5611223 2813076..2814548 1 NC_009831.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2814548 cls 5611223 cls Shewanella sediminis HAW-EB3 cardiolipin synthetase YP_001474057.1 2813076 D 425104 CDS YP_001474058.1 157375458 5609670 2815228..2817111 1 NC_009831.1 KEGG: pin:Ping_0967 nucleotidyltransferase; nucleotidyltransferase 2817111 5609670 Ssed_2321 Shewanella sediminis HAW-EB3 nucleotidyltransferase YP_001474058.1 2815228 D 425104 CDS YP_001474059.1 157375459 5611225 2817115..2817831 1 NC_009831.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 2817831 5611225 Ssed_2322 Shewanella sediminis HAW-EB3 DNA polymerase III subunit epsilon YP_001474059.1 2817115 D 425104 CDS YP_001474060.1 157375460 5611226 complement(2817938..2819515) 1 NC_009831.1 KEGG: vfi:VF2515 glycine betaine transporter; glycine betaine transporter 2819515 5611226 Ssed_2323 Shewanella sediminis HAW-EB3 glycine betaine transporter YP_001474060.1 2817938 R 425104 CDS YP_001474061.1 157375461 5611168 complement(2819755..2820735) 1 NC_009831.1 KEGG: tpt:Tpet_0284 NAD+ synthetase; NAD+ synthetase 2820735 5611168 Ssed_2324 Shewanella sediminis HAW-EB3 NAD+ synthetase YP_001474061.1 2819755 R 425104 CDS YP_001474062.1 157375462 5611169 complement(2821094..2823088) 1 NC_009831.1 KEGG: slo:Shew_1929 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2823088 5611169 Ssed_2325 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001474062.1 2821094 R 425104 CDS YP_001474063.1 157375463 5611170 complement(2823258..2824325) 1 NC_009831.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2824325 5611170 Ssed_2326 Shewanella sediminis HAW-EB3 quinolinate synthetase YP_001474063.1 2823258 R 425104 CDS YP_001474064.1 157375464 5611256 complement(2824454..2826088) 1 NC_009831.1 KEGG: sfr:Sfri_1937 catalytic domain of components of various dehydrogenase complexes; dihydrolipoamide acetyltransferase 2826088 5611256 Ssed_2327 Shewanella sediminis HAW-EB3 dihydrolipoamide acetyltransferase YP_001474064.1 2824454 R 425104 CDS YP_001474065.1 157375465 5611257 complement(2826099..2827076) 1 NC_009831.1 KEGG: slo:Shew_1926 transketolase, central region; transketolase, central region 2827076 5611257 Ssed_2328 Shewanella sediminis HAW-EB3 transketolase, central region YP_001474065.1 2826099 R 425104 CDS YP_001474066.1 157375466 5611258 complement(2827080..2828258) 1 NC_009831.1 KEGG: slo:Shew_1925 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); 3-methyl-2-oxobutanoate dehydrogenase 2828258 5611258 Ssed_2329 Shewanella sediminis HAW-EB3 3-methyl-2-oxobutanoate dehydrogenase YP_001474066.1 2827080 R 425104 CDS YP_001474067.1 157375467 5611259 complement(2828478..2829521) 1 NC_009831.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 2829521 5611259 Ssed_2330 Shewanella sediminis HAW-EB3 succinylglutamate desuccinylase YP_001474067.1 2828478 R 425104 CDS YP_001474068.1 157375468 5614130 2829819..2830298 1 NC_009831.1 KEGG: slo:Shew_1923 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 2830298 5614130 Ssed_2331 Shewanella sediminis HAW-EB3 peptide methionine sulfoxide reductase YP_001474068.1 2829819 D 425104 CDS YP_001474069.1 157375469 5614131 complement(2830647..2832302) 1 NC_009831.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2832302 5614131 Ssed_2332 Shewanella sediminis HAW-EB3 phosphoglucomutase YP_001474069.1 2830647 R 425104 CDS YP_001474070.1 157375470 5614132 complement(2832381..2832923) 1 NC_009831.1 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 2832923 5614132 Ssed_2333 Shewanella sediminis HAW-EB3 replication initiation regulator SeqA YP_001474070.1 2832381 R 425104 CDS YP_001474071.1 157375471 5614133 2833215..2833991 1 NC_009831.1 KEGG: shw:Sputw3181_2128 alpha/beta hydrolase fold; alpha/beta hydrolase 2833991 5614133 Ssed_2334 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001474071.1 2833215 D 425104 CDS YP_001474072.1 157375472 5613851 2834064..2834285 1 NC_009831.1 KEGG: son:SO2332 hypothetical protein; hypothetical protein 2834285 5613851 Ssed_2335 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474072.1 2834064 D 425104 CDS YP_001474073.1 157375473 5613852 2834297..2834572 1 NC_009831.1 KEGG: slo:Shew_1918 CopG domain protein DNA-binding domain protein; LexA regulated protein 2834572 5613852 Ssed_2336 Shewanella sediminis HAW-EB3 LexA regulated protein YP_001474073.1 2834297 D 425104 CDS YP_001474074.1 157375474 5613853 2834621..2835151 1 NC_009831.1 KEGG: slo:Shew_1917 flavodoxin; flavodoxin 2835151 5613853 Ssed_2337 Shewanella sediminis HAW-EB3 flavodoxin YP_001474074.1 2834621 D 425104 CDS YP_001474075.1 157375475 5613854 2835236..2836414 1 NC_009831.1 KEGG: sbl:Sbal_4517 hypothetical protein; hypothetical protein 2836414 5613854 Ssed_2338 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474075.1 2835236 D 425104 CDS YP_001474076.1 157375476 5614071 2836460..2837020 1 NC_009831.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2837020 5614071 Ssed_2339 Shewanella sediminis HAW-EB3 elongation factor P YP_001474076.1 2836460 D 425104 CDS YP_001474077.1 157375477 5614072 2837310..2838524 1 NC_009831.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase 2838524 5614072 Ssed_2340 Shewanella sediminis HAW-EB3 aminotransferase YP_001474077.1 2837310 D 425104 CDS YP_001474078.1 157375478 5614073 complement(2838578..2839630) 1 NC_009831.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 2839630 5614073 Ssed_2341 Shewanella sediminis HAW-EB3 galactose-1-phosphate uridylyltransferase YP_001474078.1 2838578 R 425104 CDS YP_001474079.1 157375479 5610356 complement(2839803..2848241) 1 NC_009831.1 KEGG: slo:Shew_0313 outer membrane adhesin like proteiin; outer membrane adhesin-like protein 2848241 5610356 Ssed_2342 Shewanella sediminis HAW-EB3 outer membrane adhesin-like protein YP_001474079.1 2839803 R 425104 CDS YP_001474080.1 157375480 5610357 complement(2848787..2850820) 1 NC_009831.1 KEGG: slo:Shew_2294 hypothetical protein; hypothetical protein 2850820 5610357 Ssed_2343 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474080.1 2848787 R 425104 CDS YP_001474081.1 157375481 5610358 complement(2851080..2851955) 1 NC_009831.1 KEGG: slo:Shew_2295 transcriptional regulator, AraC family; AraC family transcriptional regulator 2851955 5610358 Ssed_2344 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001474081.1 2851080 R 425104 CDS YP_001474082.1 157375482 5610359 2852145..2852732 1 NC_009831.1 KEGG: slo:Shew_1913 metal dependent phosphohydrolase; hypothetical protein 2852732 5610359 Ssed_2345 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474082.1 2852145 D 425104 CDS YP_001474083.1 157375483 5611325 2852754..2854088 1 NC_009831.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2854088 5611325 Ssed_2346 Shewanella sediminis HAW-EB3 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001474083.1 2852754 D 425104 CDS YP_001474084.1 157375484 5611326 complement(2854158..2854847) 1 NC_009831.1 KEGG: mac:MA3655 UbiE/COQ5 methyltransferase; UbiE/COQ5 methyltransferase 2854847 5611326 Ssed_2347 Shewanella sediminis HAW-EB3 UbiE/COQ5 methyltransferase YP_001474084.1 2854158 R 425104 CDS YP_001474085.1 157375485 5611327 complement(2855422..2856054) 1 NC_009831.1 KEGG: slo:Shew_1911 multiple antibiotic resistance (MarC)-related protein; hypothetical protein 2856054 5611327 Ssed_2348 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474085.1 2855422 R 425104 CDS YP_001474086.1 157375486 5611328 2856379..2858979 1 NC_009831.1 KEGG: sfr:Sfri_1898 iron-containing alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2858979 5611328 Ssed_2349 Shewanella sediminis HAW-EB3 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_001474086.1 2856379 D 425104 CDS YP_001474087.1 157375487 5611362 complement(2859074..2859868) 1 NC_009831.1 KEGG: hypothetical protein; hypothetical protein 2859868 5611362 Ssed_2350 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474087.1 2859074 R 425104 CDS YP_001474088.1 157375488 5611363 complement(2860134..2862308) 1 NC_009831.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2862308 5611363 Ssed_2351 Shewanella sediminis HAW-EB3 malate synthase G YP_001474088.1 2860134 R 425104 CDS YP_001474089.1 157375489 5611364 complement(2862534..2863478) 1 NC_009831.1 KEGG: sfr:Sfri_3138 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 2863478 5611364 Ssed_2352 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474089.1 2862534 R 425104 CDS YP_001474090.1 157375490 5611365 2863595..2865178 1 NC_009831.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 2865178 5611365 Ssed_2353 Shewanella sediminis HAW-EB3 isocitrate lyase YP_001474090.1 2863595 D 425104 CDS YP_001474091.1 157375491 5610613 complement(2865282..2865956) 1 NC_009831.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase 2865956 5610613 Ssed_2354 Shewanella sediminis HAW-EB3 nucleotidase YP_001474091.1 2865282 R 425104 CDS YP_001474092.1 157375492 5610614 complement(2866172..2866723) 1 NC_009831.1 KEGG: mac:MA2053 hypothetical protein; hypothetical protein 2866723 5610614 Ssed_2355 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474092.1 2866172 R 425104 CDS YP_001474093.1 157375493 5610615 complement(2866720..2868048) 1 NC_009831.1 KEGG: ter:Tery_1595 hypothetical protein; hypothetical protein 2868048 5610615 Ssed_2356 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474093.1 2866720 R 425104 CDS YP_001474094.1 157375494 5612968 complement(2868219..2870273) 1 NC_009831.1 KEGG: slo:Shew_1905 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 2870273 5612968 Ssed_2357 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001474094.1 2868219 R 425104 CDS YP_001474095.1 157375495 5612969 complement(2870484..2872022) 1 NC_009831.1 KEGG: slo:Shew_1904 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 2872022 5612969 Ssed_2358 Shewanella sediminis HAW-EB3 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_001474095.1 2870484 R 425104 CDS YP_001474096.1 157375496 5612970 2872233..2873642 1 NC_009831.1 KEGG: shw:Sputw3181_2219 para-aminobenzoate synthase, subunit I; para-aminobenzoate synthase subunit I 2873642 5612970 Ssed_2359 Shewanella sediminis HAW-EB3 para-aminobenzoate synthase subunit I YP_001474096.1 2872233 D 425104 CDS YP_001474097.1 157375497 5612971 2873696..2874265 1 NC_009831.1 KEGG: slo:Shew_1902 NUDIX hydrolase; NUDIX hydrolase 2874265 5612971 Ssed_2360 Shewanella sediminis HAW-EB3 NUDIX hydrolase YP_001474097.1 2873696 D 425104 CDS YP_001474098.1 157375498 5611452 complement(2874393..2874728) 1 NC_009831.1 KEGG: slo:Shew_1901 hypothetical protein; hypothetical protein 2874728 5611452 Ssed_2361 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474098.1 2874393 R 425104 CDS YP_001474099.1 157375499 5611453 2874993..2876393 1 NC_009831.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 2876393 asnC 5611453 asnC Shewanella sediminis HAW-EB3 asparaginyl-tRNA synthetase YP_001474099.1 2874993 D 425104 CDS YP_001474100.1 157375500 5611454 complement(2876475..2877509) 1 NC_009831.1 KEGG: ppr:PBPRB0600 hypothetical protein; hypothetical protein 2877509 5611454 Ssed_2363 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474100.1 2876475 R 425104 CDS YP_001474101.1 157375501 5611455 complement(2877553..2878518) 1 NC_009831.1 KEGG: ppr:PBPRB0601 hypothetical tight adherence TadC-related transmembrane protein; tight adherence TadC-like transmembrane protein 2878518 5611455 Ssed_2364 Shewanella sediminis HAW-EB3 tight adherence TadC-like transmembrane protein YP_001474101.1 2877553 R 425104 CDS YP_001474102.1 157375502 5611031 complement(2878521..2879498) 1 NC_009831.1 KEGG: ppr:PBPRB0602 hypothetical Flp pilus assembly protein TadB; Flp pilus assembly protein TadB 2879498 5611031 Ssed_2365 Shewanella sediminis HAW-EB3 Flp pilus assembly protein TadB YP_001474102.1 2878521 R 425104 CDS YP_001474103.1 157375503 5611032 complement(2879510..2880835) 1 NC_009831.1 KEGG: ppr:PBPRB0603 pilus assembly protein; pilus assembly protein 2880835 5611032 Ssed_2366 Shewanella sediminis HAW-EB3 pilus assembly protein YP_001474103.1 2879510 R 425104 CDS YP_001474104.1 157375504 5611033 complement(2880838..2882094) 1 NC_009831.1 KEGG: ppr:PBPRB0604 pilus assembly protein CpaE; Flp pilus assembly protein ATPase CpaE-like protein 2882094 5611033 Ssed_2367 Shewanella sediminis HAW-EB3 Flp pilus assembly protein ATPase CpaE-like protein YP_001474104.1 2880838 R 425104 CDS YP_001474105.1 157375505 5611034 complement(2882162..2882620) 1 NC_009831.1 KEGG: ppr:PBPRB0605 hypothetical protein; hypothetical protein 2882620 5611034 Ssed_2368 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474105.1 2882162 R 425104 CDS YP_001474106.1 157375506 5611889 complement(2882617..2883114) 1 NC_009831.1 KEGG: ppr:PBPRB0606 hypothetical protein; hypothetical protein 2883114 5611889 Ssed_2369 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474106.1 2882617 R 425104 CDS YP_001474107.1 157375507 5611890 complement(2883124..2884509) 1 NC_009831.1 KEGG: ppr:PBPRB0607 hypothetical protein; hypothetical protein 2884509 5611890 Ssed_2370 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474107.1 2883124 R 425104 CDS YP_001474108.1 157375508 5611891 complement(2884851..2886302) 1 NC_009831.1 KEGG: vvy:VV2660 flp pilus assembly protein, secretin CpaC; flp pilus assembly protein, secretin CpaC 2886302 5611891 Ssed_2371 Shewanella sediminis HAW-EB3 flp pilus assembly protein, secretin CpaC YP_001474108.1 2884851 R 425104 CDS YP_001474109.1 157375509 5611424 complement(2886343..2887167) 1 NC_009831.1 KEGG: ppr:PBPRB0611 hypothetical Flp pilus assembly protein; Flp pilus assembly protein CpaB-like protein 2887167 5611424 Ssed_2372 Shewanella sediminis HAW-EB3 Flp pilus assembly protein CpaB-like protein YP_001474109.1 2886343 R 425104 CDS YP_001474110.1 157375510 5611425 complement(2887208..2888524) 1 NC_009831.1 KEGG: ppr:PBPRB0612 hypothetical protein; hypothetical protein 2888524 5611425 Ssed_2373 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474110.1 2887208 R 425104 CDS YP_001474111.1 157375511 5611426 complement(2888526..2889101) 1 NC_009831.1 KEGG: eba:ebA3718 hypothetical protein, Flp pilus assembly protein,protease; hypothetical protein 2889101 5611426 Ssed_2374 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474111.1 2888526 R 425104 CDS YP_001474112.1 157375512 5611427 complement(2889207..2889407) 1 NC_009831.1 hypothetical protein 2889407 5611427 Ssed_2375 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474112.1 2889207 R 425104 CDS YP_001474113.1 157375513 5612181 complement(2890016..2890468) 1 NC_009831.1 KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative 2890468 5612181 Ssed_2376 Shewanella sediminis HAW-EB3 transposase and inactivated derivative YP_001474113.1 2890016 R 425104 CDS YP_001474114.1 157375514 5612182 complement(2890472..2891923) 1 NC_009831.1 KEGG: aha:AHA_1222 cell wall degradation protein; hypothetical protein 2891923 5612182 Ssed_2377 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474114.1 2890472 R 425104 CDS YP_001474115.1 157375515 5612183 2892284..2892526 1 NC_009831.1 hypothetical protein 2892526 5612183 Ssed_2378 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474115.1 2892284 D 425104 CDS YP_001474116.1 157375516 5612184 2892574..2894649 1 NC_009831.1 KEGG: lpp:lpp2806 hypothetical protein; hypothetical protein 2894649 5612184 Ssed_2379 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474116.1 2892574 D 425104 CDS YP_001474117.1 157375517 5612250 2894861..2896102 1 NC_009831.1 KEGG: ppr:PBPRB0424 hypothetical GGDEF family protein; diguanylate cyclase 2896102 5612250 Ssed_2380 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001474117.1 2894861 D 425104 CDS YP_001474118.1 157375518 5612251 complement(2896701..2897642) 1 NC_009831.1 KEGG: bcz:BCZK5129 glycosyltransferase, group 2 family protein; glycosyltransferase, group 2 family protein 2897642 5612251 Ssed_2381 Shewanella sediminis HAW-EB3 glycosyltransferase, group 2 family protein YP_001474118.1 2896701 R 425104 CDS YP_001474119.1 157375519 5612252 complement(2897686..2898417) 1 NC_009831.1 KEGG: bte:BTH_II2259 generic methyltransferase; generic methyltransferase 2898417 5612252 Ssed_2382 Shewanella sediminis HAW-EB3 generic methyltransferase YP_001474119.1 2897686 R 425104 CDS YP_001474120.1 157375520 5612253 complement(2898488..2900095) 1 NC_009831.1 KEGG: cbu:CBU_0617 hypothetical protein; hypothetical protein 2900095 5612253 Ssed_2383 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474120.1 2898488 R 425104 CDS YP_001474121.1 157375521 5612993 2900562..2900981 1 NC_009831.1 KEGG: slo:Shew_1893 protein of unknown function UPF0047; hypothetical protein 2900981 5612993 Ssed_2384 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474121.1 2900562 D 425104 CDS YP_001474122.1 157375522 5612994 complement(2901011..2901775) 1 NC_009831.1 KEGG: dde:Dde_3602 hypothetical protein; hypothetical protein 2901775 5612994 Ssed_2385 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474122.1 2901011 R 425104 CDS YP_001474123.1 157375523 5612995 2902072..2902758 1 NC_009831.1 KEGG: pat:Patl_3085 flagellin-like; flagellin-like protein 2902758 5612995 Ssed_2386 Shewanella sediminis HAW-EB3 flagellin-like protein YP_001474123.1 2902072 D 425104 CDS YP_001474124.1 157375524 5613052 complement(2902811..2906083) 1 NC_009831.1 KEGG: slo:Shew_1892 SNF2-related protein; non-specific serine/threonine protein kinase 2906083 5613052 Ssed_2387 Shewanella sediminis HAW-EB3 non-specific serine/threonine protein kinase YP_001474124.1 2902811 R 425104 CDS YP_001474125.1 157375525 5613053 complement(2906404..2907171) 1 NC_009831.1 KEGG: slo:Shew_2692 cytochrome b561; cytochrome b561 2907171 5613053 Ssed_2388 Shewanella sediminis HAW-EB3 cytochrome b561 YP_001474125.1 2906404 R 425104 CDS YP_001474126.1 157375526 5613054 complement(2907329..2909554) 1 NC_009831.1 KEGG: sbl:Sbal_4570 hypothetical protein; hypothetical protein 2909554 5613054 Ssed_2389 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474126.1 2907329 R 425104 CDS YP_001474127.1 157375527 5613055 complement(2909924..2911183) 1 NC_009831.1 KEGG: she:Shewmr4_2131 Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein 2911183 5613055 Ssed_2390 Shewanella sediminis HAW-EB3 Fmu (Sun) domain-containing protein YP_001474127.1 2909924 R 425104 CDS YP_001474128.1 157375528 5612577 complement(2911328..2912716) 1 NC_009831.1 KEGG: slo:Shew_1884 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2912716 5612577 Ssed_2391 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001474128.1 2911328 R 425104 CDS YP_001474129.1 157375529 5612578 complement(2912906..2913526) 1 NC_009831.1 hypothetical protein 2913526 5612578 Ssed_2392 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474129.1 2912906 R 425104 CDS YP_001474130.1 157375530 5612579 complement(2913528..2915981) 1 NC_009831.1 KEGG: hch:HCH_06689 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; signal transduction protein 2915981 5612579 Ssed_2393 Shewanella sediminis HAW-EB3 signal transduction protein YP_001474130.1 2913528 R 425104 CDS YP_001474131.1 157375531 5612580 complement(2915988..2917064) 1 NC_009831.1 KEGG: hch:HCH_02001 spermidine/putrescine-binding periplasmic protein; spermidine/putrescine-binding periplasmic protein 2917064 5612580 Ssed_2394 Shewanella sediminis HAW-EB3 spermidine/putrescine-binding periplasmic protein YP_001474131.1 2915988 R 425104 CDS YP_001474132.1 157375532 5613642 complement(2917461..2917883) 1 NC_009831.1 KEGG: ppr:PBPRA1918 glyoxalase family protein; glyoxalase family protein 2917883 5613642 Ssed_2395 Shewanella sediminis HAW-EB3 glyoxalase family protein YP_001474132.1 2917461 R 425104 CDS YP_001474133.1 157375533 5613643 2918040..2918189 1 NC_009831.1 KEGG: sbl:Sbal_1509 protein of unknown function DUF6, transmembrane; hypothetical protein 2918189 5613643 Ssed_2396 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474133.1 2918040 D 425104 CDS YP_001474134.1 157375534 5613644 complement(2918227..2918685) 1 NC_009831.1 KEGG: pfo:Pfl_5432 hypothetical protein; hypothetical protein 2918685 5613644 Ssed_2397 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474134.1 2918227 R 425104 CDS YP_001474135.1 157375535 5613645 2918813..2919061 1 NC_009831.1 hypothetical protein 2919061 5613645 Ssed_2398 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474135.1 2918813 D 425104 CDS YP_001474136.1 157375536 5610375 2919231..2920517 1 NC_009831.1 KEGG: slo:Shew_3493 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 2920517 5610375 Ssed_2399 Shewanella sediminis HAW-EB3 acetyl-CoA hydrolase/transferase YP_001474136.1 2919231 D 425104 CDS YP_001474137.1 157375537 5610376 complement(2920633..2921112) 1 NC_009831.1 hypothetical protein 2921112 5610376 Ssed_2400 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474137.1 2920633 R 425104 CDS YP_001474138.1 157375538 5610377 complement(2921147..2922067) 1 NC_009831.1 KEGG: slo:Shew_1461 zinc carboxypeptidase-related protein; zinc carboxypeptidase-related protein 2922067 5610377 Ssed_2401 Shewanella sediminis HAW-EB3 zinc carboxypeptidase-related protein YP_001474138.1 2921147 R 425104 CDS YP_001474139.1 157375539 5613008 complement(2922175..2922681) 1 NC_009831.1 KEGG: ppr:PBPRB1420 hypothetical protein; hypothetical protein 2922681 5613008 Ssed_2402 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474139.1 2922175 R 425104 CDS YP_001474140.1 157375540 5613009 complement(2922811..2923179) 1 NC_009831.1 KEGG: sfr:Sfri_1350 hypothetical protein; hypothetical protein 2923179 5613009 Ssed_2403 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474140.1 2922811 R 425104 CDS YP_001474141.1 157375541 5613010 2923404..2924321 1 NC_009831.1 KEGG: csa:Csal_1188 transcriptional regulator, LysR family; LysR family transcriptional regulator 2924321 5613010 Ssed_2404 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474141.1 2923404 D 425104 CDS YP_001474142.1 157375542 5613011 2924581..2925678 1 NC_009831.1 KEGG: csa:Csal_1189 porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase 2925678 5613011 Ssed_2405 Shewanella sediminis HAW-EB3 agmatine deiminase YP_001474142.1 2924581 D 425104 CDS YP_001474143.1 157375543 5613465 2925750..2926838 1 NC_009831.1 KEGG: yen:YE1484 putrescine-binding periplasmic protein precursor; putrescine-binding periplasmic protein 2926838 5613465 Ssed_2406 Shewanella sediminis HAW-EB3 putrescine-binding periplasmic protein YP_001474143.1 2925750 D 425104 CDS YP_001474144.1 157375544 5613466 2926874..2927833 1 NC_009831.1 KEGG: vpa:VP1774 carbon-nitrogen hydrolase; carbon-nitrogen hydrolase 2927833 5613466 Ssed_2407 Shewanella sediminis HAW-EB3 carbon-nitrogen hydrolase YP_001474144.1 2926874 D 425104 CDS YP_001474145.1 157375545 5613467 complement(2927897..2929039) 1 NC_009831.1 KEGG: shw:Sputw3181_2100 cupin 4 family protein; cupin 4 family protein 2929039 5613467 Ssed_2408 Shewanella sediminis HAW-EB3 cupin 4 family protein YP_001474145.1 2927897 R 425104 CDS YP_001474146.1 157375546 5613468 2929405..2931495 1 NC_009831.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2931495 5613468 Ssed_2409 Shewanella sediminis HAW-EB3 elongation factor G YP_001474146.1 2929405 D 425104 CDS YP_001474147.1 157375547 5609770 2931924..2932550 1 NC_009831.1 KEGG: ppr:PBPRB1229 DNA polymerase III; DNA-directed DNA polymerase 2932550 5609770 Ssed_2410 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001474147.1 2931924 D 425104 CDS YP_001474148.1 157375548 5609771 complement(2932676..2933383) 1 NC_009831.1 KEGG: shn:Shewana3_2253 hypothetical protein; hypothetical protein 2933383 5609771 Ssed_2411 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474148.1 2932676 R 425104 CDS YP_001474149.1 157375549 5609772 2933737..2935374 1 NC_009831.1 KEGG: slo:Shew_1868 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2935374 5609772 Ssed_2412 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001474149.1 2933737 D 425104 CDS YP_001474150.1 157375550 5609773 2935481..2935867 1 NC_009831.1 KEGG: slo:Shew_1867 hypothetical protein; hypothetical protein 2935867 5609773 Ssed_2413 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474150.1 2935481 D 425104 CDS YP_001474151.1 157375551 5609729 2935904..2936161 1 NC_009831.1 KEGG: shn:Shewana3_2256 phosphocarrier, HPr family; HPr family phosphocarrier protein 2936161 5609729 Ssed_2414 Shewanella sediminis HAW-EB3 HPr family phosphocarrier protein YP_001474151.1 2935904 D 425104 CDS YP_001474152.1 157375552 5609730 2936336..2938036 1 NC_009831.1 KEGG: shm:Shewmr7_1842 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 2938036 5609730 Ssed_2415 Shewanella sediminis HAW-EB3 phosphoenolpyruvate-protein phosphotransferase YP_001474152.1 2936336 D 425104 CDS YP_001474153.1 157375553 5609731 2938108..2938617 1 NC_009831.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 2938617 5609731 Ssed_2416 Shewanella sediminis HAW-EB3 PTS system glucose-specific transporter YP_001474153.1 2938108 D 425104 CDS YP_001474154.1 157375554 5613727 2938992..2939336 1 NC_009831.1 KEGG: shm:Shewmr7_2120 hypothetical protein; hypothetical protein 2939336 5613727 Ssed_2417 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474154.1 2938992 D 425104 CDS YP_001474155.1 157375555 5613728 2939333..2940463 1 NC_009831.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2940463 5613728 Ssed_2418 Shewanella sediminis HAW-EB3 succinyl-diaminopimelate desuccinylase YP_001474155.1 2939333 D 425104 CDS YP_001474156.1 157375556 5613729 2940463..2941140 1 NC_009831.1 KEGG: slo:Shew_1861 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin 2941140 5613729 Ssed_2419 Shewanella sediminis HAW-EB3 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin YP_001474156.1 2940463 D 425104 CDS YP_001474157.1 157375557 5613730 2941189..2942025 1 NC_009831.1 KEGG: slo:Shew_1860 alpha/beta hydrolase fold; alpha/beta hydrolase 2942025 5613730 Ssed_2420 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001474157.1 2941189 D 425104 CDS YP_001474158.1 157375558 5609832 2942233..2942847 1 NC_009831.1 KEGG: slo:Shew_1859 carbonate dehydratase; carbonate dehydratase 2942847 5609832 Ssed_2421 Shewanella sediminis HAW-EB3 carbonate dehydratase YP_001474158.1 2942233 D 425104 CDS YP_001474159.1 157375559 5609833 2943150..2944334 1 NC_009831.1 KEGG: slo:Shew_1858 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2944334 5609833 Ssed_2422 Shewanella sediminis HAW-EB3 DegT/DnrJ/EryC1/StrS aminotransferase YP_001474159.1 2943150 D 425104 CDS YP_001474160.1 157375560 5609834 2944420..2945490 1 NC_009831.1 KEGG: slo:Shew_1857 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2945490 5609834 Ssed_2423 Shewanella sediminis HAW-EB3 iron-containing alcohol dehydrogenase YP_001474160.1 2944420 D 425104 CDS YP_001474161.1 157375561 5609835 2945609..2946346 1 NC_009831.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2946346 5609835 Ssed_2424 Shewanella sediminis HAW-EB3 3-deoxy-manno-octulosonate cytidylyltransferase YP_001474161.1 2945609 D 425104 CDS YP_001474162.1 157375562 5613932 2946388..2946624 1 NC_009831.1 KEGG: slo:Shew_1855 hypothetical protein; hypothetical protein 2946624 5613932 Ssed_2425 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474162.1 2946388 D 425104 CDS YP_001474163.1 157375563 5613933 2946856..2947605 1 NC_009831.1 KEGG: sat:SYN_01766 lysine decarboxylase family; lysine decarboxylase family protein 2947605 5613933 Ssed_2426 Shewanella sediminis HAW-EB3 lysine decarboxylase family protein YP_001474163.1 2946856 D 425104 CDS YP_001474164.1 157375564 5613934 complement(2947732..2950827) 1 NC_009831.1 KEGG: slo:Shew_1852 acriflavin resistance protein; acriflavin resistance protein 2950827 5613934 Ssed_2427 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001474164.1 2947732 R 425104 CDS YP_001474165.1 157375565 5613935 complement(2950824..2951909) 1 NC_009831.1 KEGG: slo:Shew_1851 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2951909 5613935 Ssed_2428 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001474165.1 2950824 R 425104 CDS YP_001474166.1 157375566 5613774 complement(2952175..2953296) 1 NC_009831.1 KEGG: slo:Shew_1849 NlpBDapX family lipoprotein; NlpB/DapX family lipoprotein 2953296 5613774 Ssed_2429 Shewanella sediminis HAW-EB3 NlpB/DapX family lipoprotein YP_001474166.1 2952175 R 425104 CDS YP_001474167.1 157375567 5613775 complement(2953300..2954184) 1 NC_009831.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2954184 5613775 Ssed_2430 Shewanella sediminis HAW-EB3 dihydrodipicolinate synthase YP_001474167.1 2953300 R 425104 CDS YP_001474168.1 157375568 5613776 2954483..2955022 1 NC_009831.1 KEGG: slo:Shew_1847 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 2955022 5613776 Ssed_2431 Shewanella sediminis HAW-EB3 amino acid-binding ACT domain-containing protein YP_001474168.1 2954483 D 425104 CDS YP_001474169.1 157375569 5614150 2955045..2955515 1 NC_009831.1 KEGG: shw:Sputw3181_2325 redoxin domain protein; redoxin domain-containing protein 2955515 5614150 Ssed_2432 Shewanella sediminis HAW-EB3 redoxin domain-containing protein YP_001474169.1 2955045 D 425104 CDS YP_001474170.1 157375570 5614151 complement(2955647..2956255) 1 NC_009831.1 KEGG: slo:Shew_1845 lysine exporter protein (LysE/YggA); lysine exporter protein (LysE/YggA) 2956255 5614151 Ssed_2433 Shewanella sediminis HAW-EB3 lysine exporter protein (LysE/YggA) YP_001474170.1 2955647 R 425104 CDS YP_001474171.1 157375571 5614152 2956387..2957274 1 NC_009831.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 2957274 5614152 Ssed_2434 Shewanella sediminis HAW-EB3 chromosome replication initiation inhibitor protein YP_001474171.1 2956387 D 425104 CDS YP_001474172.1 157375572 5614153 complement(2957400..2958485) 1 NC_009831.1 KEGG: slo:Shew_1843 protein of unknown function UPF0118; hypothetical protein 2958485 5614153 Ssed_2435 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474172.1 2957400 R 425104 CDS YP_001474173.1 157375573 5609659 complement(2958516..2958746) 1 NC_009831.1 KEGG: slo:Shew_1842 SirA family protein; SirA family protein 2958746 5609659 Ssed_2436 Shewanella sediminis HAW-EB3 SirA family protein YP_001474173.1 2958516 R 425104 CDS YP_001474174.1 157375574 5609660 2959064..2960524 1 NC_009831.1 KEGG: slo:Shew_1841 peptidase M48, Ste24p; peptidase M48, Ste24p 2960524 5609660 Ssed_2437 Shewanella sediminis HAW-EB3 peptidase M48, Ste24p YP_001474174.1 2959064 D 425104 CDS YP_001474175.1 157375575 5609661 2960729..2961079 1 NC_009831.1 KEGG: she:Shewmr4_2348 arsenate reductase; arsenate reductase 2961079 5609661 Ssed_2438 Shewanella sediminis HAW-EB3 arsenate reductase YP_001474175.1 2960729 D 425104 CDS YP_001474176.1 157375576 5609662 2961094..2961465 1 NC_009831.1 KEGG: sbl:Sbal_1788 hypothetical protein; hypothetical protein 2961465 5609662 Ssed_2439 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474176.1 2961094 D 425104 CDS YP_001474177.1 157375577 5609909 2961643..2963571 1 NC_009831.1 KEGG: sbl:Sbal_1787 hypothetical protein; hypothetical protein 2963571 5609909 Ssed_2440 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474177.1 2961643 D 425104 CDS YP_001474178.1 157375578 5609910 complement(2963647..2964357) 1 NC_009831.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 2964357 5609910 Ssed_2441 Shewanella sediminis HAW-EB3 DNA replication initiation factor YP_001474178.1 2963647 R 425104 CDS YP_001474179.1 157375579 5609911 complement(2964432..2965541) 1 NC_009831.1 KEGG: slo:Shew_1837 hypothetical protein; hypothetical protein 2965541 5609911 Ssed_2442 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474179.1 2964432 R 425104 CDS YP_001474180.1 157375580 5609912 2965737..2966963 1 NC_009831.1 KEGG: slo:Shew_1836 uracil-xanthine permease; uracil-xanthine permease 2966963 5609912 Ssed_2443 Shewanella sediminis HAW-EB3 uracil-xanthine permease YP_001474180.1 2965737 D 425104 CDS YP_001474181.1 157375581 5613781 complement(2967099..2967446) 1 NC_009831.1 KEGG: slo:Shew_1835 glutaredoxin-like protein; glutaredoxin-like protein 2967446 5613781 Ssed_2444 Shewanella sediminis HAW-EB3 glutaredoxin-like protein YP_001474181.1 2967099 R 425104 CDS YP_001474182.1 157375582 5613782 2967801..2968382 1 NC_009831.1 KEGG: saz:Sama_1920 superoxide dismutase; superoxide dismutase 2968382 5613782 Ssed_2445 Shewanella sediminis HAW-EB3 superoxide dismutase YP_001474182.1 2967801 D 425104 CDS YP_001474183.1 157375583 5613783 2968636..2970570 1 NC_009831.1 KEGG: slo:Shew_1833 serine protein kinase, PrkA; serine protein kinase PrkA 2970570 5613783 Ssed_2446 Shewanella sediminis HAW-EB3 serine protein kinase PrkA YP_001474183.1 2968636 D 425104 CDS YP_001474184.1 157375584 5609707 2970606..2971892 1 NC_009831.1 KEGG: slo:Shew_1832 protein of unknown function DUF444; hypothetical protein 2971892 5609707 Ssed_2447 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474184.1 2970606 D 425104 CDS YP_001474185.1 157375585 5609708 2971902..2973422 1 NC_009831.1 KEGG: slo:Shew_1831 SpoVR family protein; SpoVR family protein 2973422 5609708 Ssed_2448 Shewanella sediminis HAW-EB3 SpoVR family protein YP_001474185.1 2971902 D 425104 CDS YP_001474186.1 157375586 5609709 complement(2973771..2974058) 1 NC_009831.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 2974058 5609709 Ssed_2449 Shewanella sediminis HAW-EB3 50S ribosomal protein L25 YP_001474186.1 2973771 R 425104 CDS YP_001474187.1 157375587 5609710 complement(2974198..2974746) 1 NC_009831.1 KEGG: shw:Sputw3181_2115 protein of unknown function DUF882; hypothetical protein 2974746 5609710 Ssed_2450 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474187.1 2974198 R 425104 CDS YP_001474188.1 157375588 5614212 complement(2974857..2976254) 1 NC_009831.1 KEGG: slo:Shew_1828 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 2976254 5614212 Ssed_2451 Shewanella sediminis HAW-EB3 peptidoglycan binding domain-containing protein YP_001474188.1 2974857 R 425104 CDS YP_001474189.1 157375589 5614213 complement(2976455..2977048) 1 NC_009831.1 KEGG: slo:Shew_1827 methylation site containing protein; methylation site containing protein 2977048 5614213 Ssed_2452 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001474189.1 2976455 R 425104 CDS YP_001474190.1 157375590 5612661 complement(2978204..2978761) 1 NC_009831.1 KEGG: slo:Shew_1826 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; glutamate-1-semialdehyde 2,1-aminomutase 2978761 5612661 Ssed_2453 Shewanella sediminis HAW-EB3 glutamate-1-semialdehyde 2,1-aminomutase YP_001474190.1 2978204 R 425104 CDS YP_001474191.1 157375591 5614215 complement(2978809..2980638) 1 NC_009831.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2980638 uvrC 5614215 uvrC Shewanella sediminis HAW-EB3 excinuclease ABC subunit C YP_001474191.1 2978809 R 425104 CDS YP_001474192.1 157375592 5609618 complement(2980685..2981329) 1 NC_009831.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 2981329 5609618 Ssed_2455 Shewanella sediminis HAW-EB3 response regulator YP_001474192.1 2980685 R 425104 CDS YP_001474193.1 157375593 5612662 complement(2982149..2982583) 1 NC_009831.1 KEGG: net:Neut_0144 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 2982583 5612662 Ssed_2456 Shewanella sediminis HAW-EB3 glutathione-dependent formaldehyde-activating protein YP_001474193.1 2982149 R 425104 CDS YP_001474194.1 157375594 5609620 complement(2982783..2983505) 1 NC_009831.1 KEGG: son:SO4624 transcriptional regulator, LuxR family; hypothetical protein 2983505 5609620 Ssed_2457 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474194.1 2982783 R 425104 CDS YP_001474195.1 157375595 5609621 complement(2983569..2984213) 1 NC_009831.1 hypothetical protein 2984213 5609621 Ssed_2458 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474195.1 2983569 R 425104 CDS YP_001474196.1 157375596 5610849 2984388..2984681 1 NC_009831.1 KEGG: psa:PST_3402 ISxac3 transposase; ISxac3 transposase 2984681 5610849 Ssed_2459 Shewanella sediminis HAW-EB3 ISxac3 transposase YP_001474196.1 2984388 D 425104 CDS YP_001474197.1 157375597 5610850 2984771..2985538 1 NC_009831.1 KEGG: pca:Pcar_1347 transposase InsF for insertion sequence IS3A/B/C/D/E/fA; transposase InsF for insertion sequence IS3A/B/C/D/E/fA 2985538 5610850 Ssed_2460 Shewanella sediminis HAW-EB3 transposase InsF for insertion sequence IS3A/B/C/D/E/fA YP_001474197.1 2984771 D 425104 CDS YP_001474198.1 157375598 5610851 complement(2986302..2986565) 1 NC_009831.1 hypothetical protein 2986565 5610851 Ssed_2461 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474198.1 2986302 R 425104 CDS YP_001474199.1 157375599 5610916 complement(2987060..2987551) 1 NC_009831.1 hypothetical protein 2987551 5610916 Ssed_2462 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474199.1 2987060 R 425104 CDS YP_001474200.1 157375600 5610917 complement(2988003..2988218) 1 NC_009831.1 KEGG: pat:Patl_2018 transcriptional regulator, XRE family; XRE family transcriptional regulator 2988218 5610917 Ssed_2463 Shewanella sediminis HAW-EB3 XRE family transcriptional regulator YP_001474200.1 2988003 R 425104 CDS YP_001474201.1 157375601 5610918 complement(2988760..2990349) 1 NC_009831.1 KEGG: vpa:VP2137 hypothetical protein; hypothetical protein 2990349 5610918 Ssed_2464 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474201.1 2988760 R 425104 CDS YP_001474202.1 157375602 5610919 complement(2990548..2991693) 1 NC_009831.1 KEGG: vpa:VP2136 pore-forming cytotoxin integrase; pore-forming cytotoxin integrase 2991693 5610919 Ssed_2465 Shewanella sediminis HAW-EB3 pore-forming cytotoxin integrase YP_001474202.1 2990548 R 425104 CDS YP_001474203.1 157375603 5611420 complement(2991829..2993121) 1 NC_009831.1 KEGG: vpa:VP2131 hypothetical protein; hypothetical protein 2993121 5611420 Ssed_2466 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474203.1 2991829 R 425104 CDS YP_001474204.1 157375604 5609651 2993525..2995267 1 NC_009831.1 KEGG: sbl:Sbal_2564 conserved hypothetical ATP-dependent protease; ATP-dependent protease 2995267 5609651 Ssed_2467 Shewanella sediminis HAW-EB3 ATP-dependent protease YP_001474204.1 2993525 D 425104 CDS YP_001474205.1 157375605 5611422 2995337..2995852 1 NC_009831.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 2995852 5611422 Ssed_2468 Shewanella sediminis HAW-EB3 3-hydroxydecanoyl-ACP dehydratase YP_001474205.1 2995337 D 425104 CDS YP_001474206.1 157375606 5611423 complement(2995932..2996108) 1 NC_009831.1 KEGG: slo:Shew_1816 ribosome modulation factor; ribosome modulation factor 2996108 5611423 Ssed_2469 Shewanella sediminis HAW-EB3 ribosome modulation factor YP_001474206.1 2995932 R 425104 CDS YP_001474207.1 157375607 5610076 complement(2996285..2998147) 1 NC_009831.1 KEGG: slo:Shew_1815 hypothetical protein; hypothetical protein 2998147 5610076 Ssed_2470 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474207.1 2996285 R 425104 CDS YP_001474208.1 157375608 5610077 complement(2998177..3000093) 1 NC_009831.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 3000093 5610077 Ssed_2471 Shewanella sediminis HAW-EB3 ABC transporter ATPase YP_001474208.1 2998177 R 425104 CDS YP_001474209.1 157375609 5610078 complement(3000095..3000334) 1 NC_009831.1 KEGG: sbl:Sbal_2569 glutaredoxin 2; glutaredoxin 3000334 5610078 Ssed_2472 Shewanella sediminis HAW-EB3 glutaredoxin YP_001474209.1 3000095 R 425104 CDS YP_001474210.1 157375610 5610079 complement(3000324..3002459) 1 NC_009831.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 3002459 rlmL 5610079 rlmL Shewanella sediminis HAW-EB3 23S rRNA m(2)G2445 methyltransferase YP_001474210.1 3000324 R 425104 CDS YP_001474211.1 157375611 5611781 complement(3003884..3004417) 1 NC_009831.1 KEGG: slo:Shew_1811 protein of unknown function DUF1379; hypothetical protein 3004417 5611781 Ssed_2474 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474211.1 3003884 R 425104 CDS YP_001474212.1 157375612 5611382 complement(3004583..3005602) 1 NC_009831.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 3005602 5611382 Ssed_2475 Shewanella sediminis HAW-EB3 dihydroorotate dehydrogenase 2 YP_001474212.1 3004583 R 425104 CDS YP_001474213.1 157375613 5611383 complement(3005662..3010506) 1 NC_009831.1 KEGG: slo:Shew_1809 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 3010506 5611383 Ssed_2476 Shewanella sediminis HAW-EB3 NAD-glutamate dehydrogenase YP_001474213.1 3005662 R 425104 CDS YP_001474214.1 157375614 5610476 complement(3010772..3013090) 1 NC_009831.1 KEGG: slo:Shew_1808 hypothetical protein; hypothetical protein 3013090 5610476 Ssed_2477 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474214.1 3010772 R 425104 CDS YP_001474215.1 157375615 5610477 complement(3013107..3014132) 1 NC_009831.1 KEGG: shm:Shewmr7_1753 BNR repeat protein; BNR repeat-containing protein 3014132 5610477 Ssed_2478 Shewanella sediminis HAW-EB3 BNR repeat-containing protein YP_001474215.1 3013107 R 425104 CDS YP_001474216.1 157375616 5610478 complement(3014191..3015555) 1 NC_009831.1 KEGG: slo:Shew_1806 protein of unknown function DUF1329; hypothetical protein 3015555 5610478 Ssed_2479 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474216.1 3014191 R 425104 CDS YP_001474217.1 157375617 5610479 complement(3015574..3017634) 1 NC_009831.1 KEGG: slo:Shew_1805 protein of unknown function DUF1302; hypothetical protein 3017634 5610479 Ssed_2480 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474217.1 3015574 R 425104 CDS YP_001474218.1 157375618 5611160 complement(3017962..3018177) 1 NC_009831.1 KEGG: shw:Sputw3181_1809 hypothetical protein; hypothetical protein 3018177 5611160 Ssed_2481 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474218.1 3017962 R 425104 CDS YP_001474219.1 157375619 5611161 complement(3018283..3020850) 1 NC_009831.1 KEGG: slo:Shew_1803 aminopeptidase N; aminopeptidase 3020850 pepN 5611161 pepN Shewanella sediminis HAW-EB3 aminopeptidase YP_001474219.1 3018283 R 425104 CDS YP_001474220.1 157375620 5611162 complement(3020972..3023044) 1 NC_009831.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 3023044 5611162 Ssed_2483 Shewanella sediminis HAW-EB3 carboxy-terminal protease YP_001474220.1 3020972 R 425104 CDS YP_001474221.1 157375621 5611163 complement(3023074..3023727) 1 NC_009831.1 affects solute and DNA transport through an unknown mechanism; solute/DNA competence effector 3023727 5611163 Ssed_2484 Shewanella sediminis HAW-EB3 solute/DNA competence effector YP_001474221.1 3023074 R 425104 CDS YP_001474222.1 157375622 5610028 complement(3023983..3024462) 1 NC_009831.1 KEGG: sfr:Sfri_2230 GAF sensor protein; GAF sensor protein 3024462 5610028 Ssed_2485 Shewanella sediminis HAW-EB3 GAF sensor protein YP_001474222.1 3023983 R 425104 CDS YP_001474223.1 157375623 5610029 complement(3024480..3024764) 1 NC_009831.1 KEGG: slo:Shew_1799 YebG family protein; hypothetical protein 3024764 5610029 Ssed_2486 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474223.1 3024480 R 425104 CDS YP_001474224.1 157375624 5610030 3024982..3025608 1 NC_009831.1 KEGG: slo:Shew_1798 paraquat-inducible protein A; paraquat-inducible protein A 3025608 5610030 Ssed_2487 Shewanella sediminis HAW-EB3 paraquat-inducible protein A YP_001474224.1 3024982 D 425104 CDS YP_001474225.1 157375625 5610031 3025601..3026242 1 NC_009831.1 KEGG: sbl:Sbal_2452 paraquat-inducible protein A; paraquat-inducible protein A 3026242 5610031 Ssed_2488 Shewanella sediminis HAW-EB3 paraquat-inducible protein A YP_001474225.1 3025601 D 425104 CDS YP_001474226.1 157375626 5611355 3026220..3028844 1 NC_009831.1 KEGG: slo:Shew_1796 mammalian cell entry related domain protein; hypothetical protein 3028844 5611355 Ssed_2489 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474226.1 3026220 D 425104 CDS YP_001474227.1 157375627 5611356 3028976..3030001 1 NC_009831.1 KEGG: shw:Sputw3181_2284 diguanylate cyclase; diguanylate cyclase 3030001 5611356 Ssed_2490 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001474227.1 3028976 D 425104 CDS YP_001474228.1 157375628 5611357 complement(3030082..3030702) 1 NC_009831.1 KEGG: she:Shewmr4_2199 sortase family protein; sortase family protein 3030702 5611357 Ssed_2491 Shewanella sediminis HAW-EB3 sortase family protein YP_001474228.1 3030082 R 425104 CDS YP_001474229.1 157375629 5609894 complement(3030699..3033011) 1 NC_009831.1 KEGG: she:Shewmr4_2200 vault protein inter-alpha-trypsin domain protein; vault protein inter-alpha-trypsin subunit 3033011 5609894 Ssed_2492 Shewanella sediminis HAW-EB3 vault protein inter-alpha-trypsin subunit YP_001474229.1 3030699 R 425104 CDS YP_001474230.1 157375630 5609895 complement(3033041..3033778) 1 NC_009831.1 KEGG: sfr:Sfri_1624 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 3033778 5609895 Ssed_2493 Shewanella sediminis HAW-EB3 OmpA/MotB domain-containing protein YP_001474230.1 3033041 R 425104 CDS YP_001474231.1 157375631 5609896 3034098..3034796 1 NC_009831.1 KEGG: slo:Shew_1791 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3034796 5609896 Ssed_2494 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001474231.1 3034098 D 425104 CDS YP_001474232.1 157375632 5609897 3034873..3037089 1 NC_009831.1 KEGG: slo:Shew_1790 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3037089 5609897 Ssed_2495 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001474232.1 3034873 D 425104 CDS YP_001474233.1 157375633 5611351 3037161..3038396 1 NC_009831.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 3038396 5611351 Ssed_2496 Shewanella sediminis HAW-EB3 cystathionine beta-lyase YP_001474233.1 3037161 D 425104 CDS YP_001474234.1 157375634 5611352 complement(3038511..3039206) 1 NC_009831.1 KEGG: slo:Shew_1665 peptidase S51, dipeptidase E; peptidase S51, dipeptidase E 3039206 5611352 Ssed_2497 Shewanella sediminis HAW-EB3 peptidase S51, dipeptidase E YP_001474234.1 3038511 R 425104 CDS YP_001474235.1 157375635 5611353 3039534..3040691 1 NC_009831.1 KEGG: slo:Shew_1968 beta-lactamase; beta-lactamase 3040691 5611353 Ssed_2498 Shewanella sediminis HAW-EB3 beta-lactamase YP_001474235.1 3039534 D 425104 CDS YP_001474236.1 157375636 5611354 3041375..3042580 1 NC_009831.1 KEGG: hit:NTHI1719 hypothetical protein; hypothetical protein 3042580 5611354 Ssed_2499 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474236.1 3041375 D 425104 CDS YP_001474237.1 157375637 5612550 3042580..3042975 1 NC_009831.1 KEGG: hit:NTHI1718 hypothetical protein; hypothetical protein 3042975 5612550 Ssed_2500 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474237.1 3042580 D 425104 CDS YP_001474238.1 157375638 5612551 3043061..3043522 1 NC_009831.1 hypothetical protein 3043522 5612551 Ssed_2501 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474238.1 3043061 D 425104 CDS YP_001474239.1 157375639 5612552 3044078..3046318 1 NC_009831.1 KEGG: dps:DP2851 similar to collagenase; collagenase-like protein 3046318 5612552 Ssed_2502 Shewanella sediminis HAW-EB3 collagenase-like protein YP_001474239.1 3044078 D 425104 CDS YP_001474240.1 157375640 5612553 3046505..3047452 1 NC_009831.1 KEGG: sbl:Sbal_3379 transcriptional regulator, LysR family; LysR family transcriptional regulator 3047452 5612553 Ssed_2503 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474240.1 3046505 D 425104 CDS YP_001474241.1 157375641 5610457 3047836..3048615 1 NC_009831.1 KEGG: ape:APE_2105.1 uridine phosphorylase; uridine phosphorylase 3048615 5610457 Ssed_2504 Shewanella sediminis HAW-EB3 uridine phosphorylase YP_001474241.1 3047836 D 425104 CDS YP_001474242.1 157375642 5610458 3048732..3048992 1 NC_009831.1 KEGG: shm:Shewmr7_0408 hypothetical protein; hypothetical protein 3048992 5610458 Ssed_2505 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474242.1 3048732 D 425104 CDS YP_001474243.1 157375643 5610459 3049254..3049460 1 NC_009831.1 KEGG: cps:CPS_3145 hypothetical protein; hypothetical protein 3049460 5610459 Ssed_2506 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474243.1 3049254 D 425104 CDS YP_001474244.1 157375644 5611078 3049490..3049684 1 NC_009831.1 KEGG: aha:AHA_3577 hypothetical protein; hypothetical protein 3049684 5611078 Ssed_2507 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474244.1 3049490 D 425104 CDS YP_001474245.1 157375645 5611079 complement(3049752..3050810) 1 NC_009831.1 KEGG: slo:Shew_2171 peptidase T2, asparaginase 2; peptidase T2, asparaginase 2 3050810 5611079 Ssed_2508 Shewanella sediminis HAW-EB3 peptidase T2, asparaginase 2 YP_001474245.1 3049752 R 425104 CDS YP_001474246.1 157375646 5611081 3053146..3057105 1 NC_009831.1 KEGG: slo:Shew_2173 protein of unknown function DUF490; hypothetical protein 3057105 5611081 Ssed_2511 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474246.1 3053146 D 425104 CDS YP_001474247.1 157375647 5610057 complement(3057176..3057925) 1 NC_009831.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 3057925 5610057 Ssed_2512 Shewanella sediminis HAW-EB3 fatty acid metabolism regulator YP_001474247.1 3057176 R 425104 CDS YP_001474248.1 157375648 5610058 3058238..3059821 1 NC_009831.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 3059821 nhaB 5610058 nhaB Shewanella sediminis HAW-EB3 sodium/proton antiporter YP_001474248.1 3058238 D 425104 CDS YP_001474249.1 157375649 5610059 3059921..3060454 1 NC_009831.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3060454 5610059 Ssed_2514 Shewanella sediminis HAW-EB3 disulfide bond formation protein B YP_001474249.1 3059921 D 425104 CDS YP_001474250.1 157375650 5610060 complement(3060589..3061479) 1 NC_009831.1 KEGG: slo:Shew_0037 phosphoesterase, PA-phosphatase related; hypothetical protein 3061479 5610060 Ssed_2515 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474250.1 3060589 R 425104 CDS YP_001474251.1 157375651 5610979 complement(3061681..3062121) 1 NC_009831.1 KEGG: slo:Shew_2181 protein of unknown function UPF0153; hypothetical protein 3062121 5610979 Ssed_2516 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474251.1 3061681 R 425104 CDS YP_001474252.1 157375652 5610980 complement(3062166..3063167) 1 NC_009831.1 KEGG: sbl:Sbal_1870 lytic murein transglycosylase; lytic murein transglycosylase 3063167 5610980 Ssed_2517 Shewanella sediminis HAW-EB3 lytic murein transglycosylase YP_001474252.1 3062166 R 425104 CDS YP_001474253.1 157375653 5610981 complement(3063206..3063487) 1 NC_009831.1 KEGG: slo:Shew_2183 protein of unknown function DUF709; hypothetical protein 3063487 5610981 Ssed_2518 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474253.1 3063206 R 425104 CDS YP_001474254.1 157375654 5610982 3063610..3064275 1 NC_009831.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 3064275 minC 5610982 minC Shewanella sediminis HAW-EB3 septum formation inhibitor YP_001474254.1 3063610 D 425104 CDS YP_001474255.1 157375655 5609614 3064301..3065110 1 NC_009831.1 KEGG: slo:Shew_2185 septum site-determining protein MinD; septum site-determining protein MinD 3065110 5609614 Ssed_2520 Shewanella sediminis HAW-EB3 septum site-determining protein MinD YP_001474255.1 3064301 D 425104 CDS YP_001474256.1 157375656 5609615 3065113..3065373 1 NC_009831.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3065373 minE 5609615 minE Shewanella sediminis HAW-EB3 cell division topological specificity factor MinE YP_001474256.1 3065113 D 425104 CDS YP_001474257.1 157375657 5609616 complement(3065729..3066838) 1 NC_009831.1 KEGG: she:Shewmr4_2176 ribonuclease D; ribonuclease D 3066838 5609616 Ssed_2522 Shewanella sediminis HAW-EB3 ribonuclease D YP_001474257.1 3065729 R 425104 CDS YP_001474258.1 157375658 5609617 complement(3066938..3068611) 1 NC_009831.1 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 3068611 5609617 Ssed_2523 Shewanella sediminis HAW-EB3 long-chain-fatty-acid--CoA ligase YP_001474258.1 3066938 R 425104 CDS YP_001474259.1 157375659 5609992 complement(3068789..3069685) 1 NC_009831.1 KEGG: shn:Shewana3_2387 alpha/beta hydrolase fold; alpha/beta hydrolase 3069685 5609992 Ssed_2524 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001474259.1 3068789 R 425104 CDS YP_001474260.1 157375660 5609993 complement(3069707..3070537) 1 NC_009831.1 KEGG: slo:Shew_2190 hypothetical protein; hypothetical protein 3070537 5609993 Ssed_2525 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474260.1 3069707 R 425104 CDS YP_001474261.1 157375661 5609994 complement(3070628..3071338) 1 NC_009831.1 KEGG: shw:Sputw3181_2267 hypothetical protein; hypothetical protein 3071338 5609994 Ssed_2526 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474261.1 3070628 R 425104 CDS YP_001474262.1 157375662 5609856 complement(3071331..3071648) 1 NC_009831.1 KEGG: sbl:Sbal_1860 hypothetical protein; hypothetical protein 3071648 5609856 Ssed_2527 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474262.1 3071331 R 425104 CDS YP_001474263.1 157375663 5609857 complement(3071838..3072557) 1 NC_009831.1 KEGG: son:SO2586 hypothetical protein; hypothetical protein 3072557 5609857 Ssed_2528 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474263.1 3071838 R 425104 CDS YP_001474264.1 157375664 5609858 complement(3072772..3073470) 1 NC_009831.1 KEGG: hch:HCH_06317 GMP synthase - glutamine amidotransferase domain; GMP synthase glutamine amidotransferase subunit 3073470 5609858 Ssed_2529 Shewanella sediminis HAW-EB3 GMP synthase glutamine amidotransferase subunit YP_001474264.1 3072772 R 425104 CDS YP_001474265.1 157375665 5609859 complement(3073502..3074668) 1 NC_009831.1 KEGG: hch:HCH_06318 alcohol dehydrogenase, class IV; alcohol dehydrogenase 3074668 5609859 Ssed_2530 Shewanella sediminis HAW-EB3 alcohol dehydrogenase YP_001474265.1 3073502 R 425104 CDS YP_001474266.1 157375666 5610307 complement(3074714..3076192) 1 NC_009831.1 KEGG: hch:HCH_06320 NAD-dependent aldehyde dehydrogenase; NAD-dependent aldehyde dehydrogenase 3076192 5610307 Ssed_2531 Shewanella sediminis HAW-EB3 NAD-dependent aldehyde dehydrogenase YP_001474266.1 3074714 R 425104 CDS YP_001474267.1 157375667 5610308 complement(3076246..3077613) 1 NC_009831.1 KEGG: ppr:PBPRB0862 hypothetical protein; hypothetical protein 3077613 5610308 Ssed_2532 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474267.1 3076246 R 425104 CDS YP_001474268.1 157375668 5610309 complement(3078437..3078910) 1 NC_009831.1 hypothetical protein 3078910 5610309 Ssed_2533 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474268.1 3078437 R 425104 CDS YP_001474269.1 157375669 5610310 complement(3078951..3079820) 1 NC_009831.1 KEGG: slo:Shew_3111 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3079820 5610310 Ssed_2534 Shewanella sediminis HAW-EB3 NAD-dependent epimerase/dehydratase YP_001474269.1 3078951 R 425104 CDS YP_001474270.1 157375670 5609583 complement(3079852..3081789) 1 NC_009831.1 KEGG: slo:Shew_2196 helicase C2; helicase C2 3081789 5609583 Ssed_2535 Shewanella sediminis HAW-EB3 helicase C2 YP_001474270.1 3079852 R 425104 CDS YP_001474271.1 157375671 5609584 complement(3082036..3082683) 1 NC_009831.1 KEGG: aha:AHA_1620 MukF protein; MukF protein 3082683 5609584 Ssed_2536 Shewanella sediminis HAW-EB3 MukF protein YP_001474271.1 3082036 R 425104 CDS YP_001474272.1 157375672 5609585 complement(3082741..3084015) 1 NC_009831.1 KEGG: sbl:Sbal_3070 protein of unknown function DUF1063; hypothetical protein 3084015 5609585 Ssed_2537 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474272.1 3082741 R 425104 CDS YP_001474273.1 157375673 5609586 complement(3084065..3084445) 1 NC_009831.1 KEGG: aha:AHA_1618 endoribonuclease L-PSP; endoribonuclease L-PSP 3084445 5609586 Ssed_2538 Shewanella sediminis HAW-EB3 endoribonuclease L-PSP YP_001474273.1 3084065 R 425104 CDS YP_001474274.1 157375674 5612961 3084740..3085492 1 NC_009831.1 KEGG: psa:PST_2776 branched-chain amino acid transport protein AzlC; branched-chain amino acid transport protein AzlC 3085492 5612961 Ssed_2539 Shewanella sediminis HAW-EB3 branched-chain amino acid transport protein AzlC YP_001474274.1 3084740 D 425104 CDS YP_001474275.1 157375675 5612962 3085497..3085841 1 NC_009831.1 KEGG: reu:Reut_A0494 protein of unknown function DUF931; hypothetical protein 3085841 5612962 Ssed_2540 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474275.1 3085497 D 425104 CDS YP_001474276.1 157375676 5612963 3086228..3087127 1 NC_009831.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 3087127 hisG 5612963 hisG Shewanella sediminis HAW-EB3 ATP phosphoribosyltransferase YP_001474276.1 3086228 D 425104 CDS YP_001474277.1 157375677 5612964 3087132..3088451 1 NC_009831.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 3088451 hisD 5612964 hisD Shewanella sediminis HAW-EB3 histidinol dehydrogenase YP_001474277.1 3087132 D 425104 CDS YP_001474278.1 157375678 5609850 3088453..3089523 1 NC_009831.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3089523 5609850 Ssed_2543 Shewanella sediminis HAW-EB3 histidinol-phosphate aminotransferase YP_001474278.1 3088453 D 425104 CDS YP_001474279.1 157375679 5609851 3089601..3090668 1 NC_009831.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 3090668 5609851 Ssed_2544 Shewanella sediminis HAW-EB3 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_001474279.1 3089601 D 425104 CDS YP_001474280.1 157375680 5609852 3090665..3091321 1 NC_009831.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3091321 hisH 5609852 hisH Shewanella sediminis HAW-EB3 imidazole glycerol phosphate synthase subunit HisH YP_001474280.1 3090665 D 425104 CDS YP_001474281.1 157375681 5609810 3091318..3092058 1 NC_009831.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3092058 5609810 Ssed_2546 Shewanella sediminis HAW-EB3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001474281.1 3091318 D 425104 CDS YP_001474282.1 157375682 5609811 3092126..3092899 1 NC_009831.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3092899 5609811 Ssed_2547 Shewanella sediminis HAW-EB3 imidazole glycerol phosphate synthase subunit HisF YP_001474282.1 3092126 D 425104 CDS YP_001474283.1 157375683 5609812 3092975..3093604 1 NC_009831.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 3093604 5609812 Ssed_2548 Shewanella sediminis HAW-EB3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_001474283.1 3092975 D 425104 CDS YP_001474284.1 157375684 5609813 3093879..3094658 1 NC_009831.1 KEGG: ppr:PBPRB0536 hypothetical amino acid ABC transporter; amino acid ABC transporter 3094658 5609813 Ssed_2549 Shewanella sediminis HAW-EB3 amino acid ABC transporter YP_001474284.1 3093879 D 425104 CDS YP_001474285.1 157375685 5609721 3094808..3095020 1 NC_009831.1 KEGG: slo:Shew_3110 hypothetical protein; hypothetical protein 3095020 5609721 Ssed_2550 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474285.1 3094808 D 425104 CDS YP_001474286.1 157375686 5609722 complement(3095106..3095924) 1 NC_009831.1 KEGG: sdn:Sden_1071 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3095924 5609722 Ssed_2551 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001474286.1 3095106 R 425104 CDS YP_001474287.1 157375687 5609723 3096246..3097352 1 NC_009831.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 3097352 5609723 Ssed_2552 Shewanella sediminis HAW-EB3 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001474287.1 3096246 D 425104 CDS YP_001474288.1 157375688 5609724 complement(3097458..3098027) 1 NC_009831.1 KEGG: slo:Shew_2272 hypothetical protein; hypothetical protein 3098027 5609724 Ssed_2553 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474288.1 3097458 R 425104 CDS YP_001474289.1 157375689 5610084 complement(3098020..3102111) 1 NC_009831.1 KEGG: slo:Shew_1752 proprotein convertase, P; proprotein convertase, P 3102111 5610084 Ssed_2554 Shewanella sediminis HAW-EB3 proprotein convertase, P YP_001474289.1 3098020 R 425104 CDS YP_001474290.1 157375690 5610085 complement(3102098..3103693) 1 NC_009831.1 KEGG: slo:Shew_1751 hypothetical protein; hypothetical protein 3103693 5610085 Ssed_2555 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474290.1 3102098 R 425104 CDS YP_001474291.1 157375691 5610086 3103741..3104079 1 NC_009831.1 KEGG: slo:Shew_2211 phosphoribosylaminoimidazolesuccinocarboxamide synthase; hypothetical protein 3104079 5610086 Ssed_2556 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474291.1 3103741 D 425104 CDS YP_001474292.1 157375692 5610087 complement(3104548..3105756) 1 NC_009831.1 KEGG: slo:Shew_2481 porin, gram-negative type; porin 3105756 5610087 Ssed_2557 Shewanella sediminis HAW-EB3 porin YP_001474292.1 3104548 R 425104 CDS YP_001474293.1 157375693 5610282 3107345..3107677 1 NC_009831.1 KEGG: bce:BC4820 hypothetical protein; hypothetical protein 3107677 5610282 Ssed_2558 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474293.1 3107345 D 425104 CDS YP_001474294.1 157375694 5610283 3107652..3108119 1 NC_009831.1 KEGG: sfr:Sfri_3485 hypothetical protein; hypothetical protein 3108119 5610283 Ssed_2559 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474294.1 3107652 D 425104 CDS YP_001474295.1 157375695 5610284 3108240..3108515 1 NC_009831.1 hypothetical protein 3108515 5610284 Ssed_2560 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474295.1 3108240 D 425104 CDS YP_001474296.1 157375696 5609666 3109232..3110704 1 NC_009831.1 KEGG: sbl:Sbal_2317 RNA-directed DNA polymerase; RNA-directed DNA polymerase 3110704 5609666 Ssed_2561 Shewanella sediminis HAW-EB3 RNA-directed DNA polymerase YP_001474296.1 3109232 D 425104 CDS YP_001474297.1 157375697 5609667 complement(3110980..3111825) 1 NC_009831.1 KEGG: vfi:VFA1051 universal stress protein family; universal stress protein 3111825 5609667 Ssed_2562 Shewanella sediminis HAW-EB3 universal stress protein YP_001474297.1 3110980 R 425104 CDS YP_001474298.1 157375698 5609668 complement(3111839..3113326) 1 NC_009831.1 KEGG: vfi:VFA1052 sulfate transporter; sulfate transporter 3113326 5609668 Ssed_2563 Shewanella sediminis HAW-EB3 sulfate transporter YP_001474298.1 3111839 R 425104 CDS YP_001474299.1 157375699 5609669 complement(3113776..3114519) 1 NC_009831.1 KEGG: sfr:Sfri_0205 pirin domain protein domain protein; pirin 3114519 5609669 Ssed_2564 Shewanella sediminis HAW-EB3 pirin YP_001474299.1 3113776 R 425104 CDS YP_001474300.1 157375700 5609802 complement(3114610..3115053) 1 NC_009831.1 KEGG: sfr:Sfri_0206 DoxX family protein; DoxX family protein 3115053 5609802 Ssed_2565 Shewanella sediminis HAW-EB3 DoxX family protein YP_001474300.1 3114610 R 425104 CDS YP_001474301.1 157375701 5609803 3115212..3116105 1 NC_009831.1 KEGG: sfr:Sfri_0207 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 3116105 5609803 Ssed_2566 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474301.1 3115212 D 425104 CDS YP_001474302.1 157375702 5609804 complement(3116246..3116986) 1 NC_009831.1 hypothetical protein 3116986 5609804 Ssed_2567 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474302.1 3116246 R 425104 CDS YP_001474303.1 157375703 5609805 complement(3117755..3119896) 1 NC_009831.1 KEGG: pfu:PF0346 aldehyde:ferredoxin oxidoreductase (aor); aldehyde ferredoxin oxidoreductase 3119896 5609805 Ssed_2568 Shewanella sediminis HAW-EB3 aldehyde ferredoxin oxidoreductase YP_001474303.1 3117755 R 425104 CDS YP_001474304.1 157375704 5609679 complement(3119905..3120591) 1 NC_009831.1 KEGG: gur:Gura_1944 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3120591 5609679 Ssed_2569 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001474304.1 3119905 R 425104 CDS YP_001474305.1 157375705 5609680 complement(3120588..3121475) 1 NC_009831.1 KEGG: reh:H16_B1454 formate dehydrogenase gamma subunit; hypothetical protein 3121475 5609680 Ssed_2570 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474305.1 3120588 R 425104 CDS YP_001474306.1 157375706 5609681 3122092..3123057 1 NC_009831.1 KEGG: vvu:VV1_0456 transcriptional regulator; transcriptional regulator-like protein 3123057 5609681 Ssed_2571 Shewanella sediminis HAW-EB3 transcriptional regulator-like protein YP_001474306.1 3122092 D 425104 CDS YP_001474307.1 157375707 5609682 3123642..3123959 1 NC_009831.1 KEGG: chu:CHU_1746 conserved hypothetical protein; possible ribosome-associated protein; hypothetical protein 3123959 5609682 Ssed_2572 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474307.1 3123642 D 425104 CDS YP_001474308.1 157375708 5610195 3124207..3124656 1 NC_009831.1 KEGG: sfr:Sfri_1145 host cell attachment-required protein; host cell attachment-required protein 3124656 5610195 Ssed_2573 Shewanella sediminis HAW-EB3 host cell attachment-required protein YP_001474308.1 3124207 D 425104 CDS YP_001474309.1 157375709 5610196 3124800..3125216 1 NC_009831.1 KEGG: pol:Bpro_3704 hypothetical protein; hypothetical protein 3125216 5610196 Ssed_2574 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474309.1 3124800 D 425104 CDS YP_001474310.1 157375710 5610197 3125409..3126152 1 NC_009831.1 KEGG: ppr:PBPRB0338 hypothetical protein; hypothetical protein 3126152 5610197 Ssed_2575 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474310.1 3125409 D 425104 CDS YP_001474311.1 157375711 5610198 3126222..3126956 1 NC_009831.1 KEGG: ppr:PBPRB0339 hypothetical protein; hypothetical protein 3126956 5610198 Ssed_2576 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474311.1 3126222 D 425104 CDS YP_001474312.1 157375712 5610875 3127305..3127823 1 NC_009831.1 KEGG: ppr:PBPRB1080 hypothetical protein; hypothetical protein 3127823 5610875 Ssed_2577 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474312.1 3127305 D 425104 CDS YP_001474313.1 157375713 5610876 3127820..3128878 1 NC_009831.1 KEGG: sfr:Sfri_0227 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 3128878 5610876 Ssed_2578 Shewanella sediminis HAW-EB3 alcohol dehydrogenase YP_001474313.1 3127820 D 425104 CDS YP_001474314.1 157375714 5610877 3129473..3130861 1 NC_009831.1 hypothetical protein 3130861 5610877 Ssed_2579 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474314.1 3129473 D 425104 CDS YP_001474315.1 157375715 5609790 3130913..3131173 1 NC_009831.1 KEGG: cps:CPS_2442 hypothetical protein; hypothetical protein 3131173 5609790 Ssed_2580 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474315.1 3130913 D 425104 CDS YP_001474316.1 157375716 5609791 3131252..3131404 1 NC_009831.1 KEGG: cps:CPS_2442 hypothetical protein; hypothetical protein 3131404 5609791 Ssed_2581 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474316.1 3131252 D 425104 CDS YP_001474317.1 157375717 5609792 3131873..3132676 1 NC_009831.1 hypothetical protein 3132676 5609792 Ssed_2582 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474317.1 3131873 D 425104 CDS YP_001474318.1 157375718 5609793 3132798..3133085 1 NC_009831.1 KEGG: shw:Sputw3181_3270 hypothetical protein; hypothetical protein 3133085 5609793 Ssed_2583 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474318.1 3132798 D 425104 CDS YP_001474319.1 157375719 5610863 complement(3133315..3134052) 1 NC_009831.1 KEGG: sth:STH592 ketoreductase; ketoreductase 3134052 5610863 Ssed_2584 Shewanella sediminis HAW-EB3 ketoreductase YP_001474319.1 3133315 R 425104 CDS YP_001474320.1 157375720 5610864 complement(3134292..3134861) 1 NC_009831.1 KEGG: bsu:BG12528 similar to NAD(P)H oxidoreductase; NAD(P)H oxidoreductase-like protein 3134861 5610864 Ssed_2585 Shewanella sediminis HAW-EB3 NAD(P)H oxidoreductase-like protein YP_001474320.1 3134292 R 425104 CDS YP_001474321.1 157375721 5610865 3135014..3135904 1 NC_009831.1 KEGG: jan:Jann_1168 transcriptional regulator, LysR family; carbonate dehydratase 3135904 5610865 Ssed_2586 Shewanella sediminis HAW-EB3 carbonate dehydratase YP_001474321.1 3135014 D 425104 CDS YP_001474322.1 157375722 5610866 3135894..3136127 1 NC_009831.1 KEGG: cps:CPS_2738 hypothetical protein; hypothetical protein 3136127 5610866 Ssed_2587 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474322.1 3135894 D 425104 CDS YP_001474323.1 157375723 5610804 3136345..3139413 1 NC_009831.1 KEGG: gur:Gura_2254 PKD domain containing protein; hypothetical protein 3139413 5610804 Ssed_2588 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474323.1 3136345 D 425104 CDS YP_001474324.1 157375724 5610805 3139584..3141083 1 NC_009831.1 KEGG: pca:Pcar_0361 sensor histidine kinase; sensor histidine kinase 3141083 5610805 Ssed_2589 Shewanella sediminis HAW-EB3 sensor histidine kinase YP_001474324.1 3139584 D 425104 CDS YP_001474325.1 157375725 5610806 3141154..3141846 1 NC_009831.1 KEGG: csa:Csal_0968 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3141846 5610806 Ssed_2590 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001474325.1 3141154 D 425104 CDS YP_001474326.1 157375726 5610807 complement(3141925..3142893) 1 NC_009831.1 hypothetical protein 3142893 5610807 Ssed_2591 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474326.1 3141925 R 425104 CDS YP_001474327.1 157375727 5610762 complement(3143075..3144013) 1 NC_009831.1 KEGG: ppr:PBPRB1431 transcriptional regulator; transcriptional regulator 3144013 5610762 Ssed_2592 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001474327.1 3143075 R 425104 CDS YP_001474328.1 157375728 5610763 3144171..3144494 1 NC_009831.1 KEGG: ppr:PBPRB1432 hypothetical protein; hypothetical protein 3144494 5610763 Ssed_2593 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474328.1 3144171 D 425104 CDS YP_001474329.1 157375729 5610764 3144505..3144876 1 NC_009831.1 KEGG: ppr:PBPRB1433 hypothetical protein; hypothetical protein 3144876 5610764 Ssed_2594 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474329.1 3144505 D 425104 CDS YP_001474330.1 157375730 5613449 complement(3144996..3145931) 1 NC_009831.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 3145931 5613449 Ssed_2595 Shewanella sediminis HAW-EB3 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_001474330.1 3144996 R 425104 CDS YP_001474331.1 157375731 5613450 complement(3146166..3146462) 1 NC_009831.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 3146462 ihfA 5613450 ihfA Shewanella sediminis HAW-EB3 integration host factor subunit alpha YP_001474331.1 3146166 R 425104 CDS YP_001474332.1 157375732 5613451 complement(3146468..3148855) 1 NC_009831.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 3148855 pheT 5613451 pheT Shewanella sediminis HAW-EB3 phenylalanyl-tRNA synthetase subunit beta YP_001474332.1 3146468 R 425104 CDS YP_001474333.1 157375733 5613452 complement(3148871..3149854) 1 NC_009831.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 3149854 pheS 5613452 pheS Shewanella sediminis HAW-EB3 phenylalanyl-tRNA synthetase subunit alpha YP_001474333.1 3148871 R 425104 CDS YP_001474334.1 157375734 5610705 3150258..3151763 1 NC_009831.1 KEGG: slo:Shew_2217 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3151763 5610705 Ssed_2599 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001474334.1 3150258 D 425104 CDS YP_001474335.1 157375735 5610706 3151935..3154547 1 NC_009831.1 KEGG: sbl:Sbal_1775 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 3154547 5610706 Ssed_2600 Shewanella sediminis HAW-EB3 multi-sensor signal transduction histidine kinase YP_001474335.1 3151935 D 425104 CDS YP_001474336.1 157375736 5610707 complement(3154872..3155741) 1 NC_009831.1 KEGG: slo:Shew_2219 protein of unknown function DUF785; hypothetical protein 3155741 5610707 Ssed_2601 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474336.1 3154872 R 425104 CDS YP_001474337.1 157375737 5610708 complement(3156009..3156392) 1 NC_009831.1 KEGG: slo:Shew_2220 hypothetical protein; hypothetical protein 3156392 5610708 Ssed_2602 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474337.1 3156009 R 425104 CDS YP_001474338.1 157375738 5610364 complement(3156422..3156709) 1 NC_009831.1 KEGG: slo:Shew_2221 hypothetical protein; hypothetical protein 3156709 5610364 Ssed_2603 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474338.1 3156422 R 425104 CDS YP_001474339.1 157375739 5610365 complement(3156805..3157161) 1 NC_009831.1 KEGG: shm:Shewmr7_1637 hypothetical protein; hypothetical protein 3157161 5610365 Ssed_2604 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474339.1 3156805 R 425104 CDS YP_001474340.1 157375740 5610366 complement(3157292..3157867) 1 NC_009831.1 KEGG: shm:Shewmr7_1636 YceI family protein; hypothetical protein 3157867 5610366 Ssed_2605 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474340.1 3157292 R 425104 CDS YP_001474341.1 157375741 5610367 complement(3158305..3158946) 1 NC_009831.1 KEGG: slo:Shew_1622 pyridoxamine 5'-phosphate oxidase; pyridoxal 5'-phosphate synthase 3158946 5610367 Ssed_2606 Shewanella sediminis HAW-EB3 pyridoxal 5'-phosphate synthase YP_001474341.1 3158305 R 425104 CDS YP_001474342.1 157375742 5610935 complement(3159010..3159930) 1 NC_009831.1 catalyzes the formation of putrescine from agmatine; agmatinase 3159930 5610935 Ssed_2607 Shewanella sediminis HAW-EB3 agmatinase YP_001474342.1 3159010 R 425104 CDS YP_001474343.1 157375743 5610936 complement(3159961..3160890) 1 NC_009831.1 KEGG: saz:Sama_1962 adenosylmethionine decarboxylase; adenosylmethionine decarboxylase 3160890 5610936 Ssed_2608 Shewanella sediminis HAW-EB3 adenosylmethionine decarboxylase YP_001474343.1 3159961 R 425104 CDS YP_001474344.1 157375744 5610937 complement(3160941..3162854) 1 NC_009831.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 3162854 5610937 Ssed_2609 Shewanella sediminis HAW-EB3 arginine decarboxylase YP_001474344.1 3160941 R 425104 CDS YP_001474345.1 157375745 5610938 3163286..3164119 1 NC_009831.1 KEGG: slo:Shew_1618 hypothetical protein; hypothetical protein 3164119 5610938 Ssed_2610 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474345.1 3163286 D 425104 CDS YP_001474346.1 157375746 5610947 3164260..3164925 1 NC_009831.1 KEGG: son:SO1867 hypothetical protein; hypothetical protein 3164925 5610947 Ssed_2611 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474346.1 3164260 D 425104 CDS YP_001474347.1 157375747 5610948 3165113..3165949 1 NC_009831.1 KEGG: slo:Shew_1616 hypothetical protein; hypothetical protein 3165949 5610948 Ssed_2612 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474347.1 3165113 D 425104 CDS YP_001474348.1 157375748 5610949 3165946..3166845 1 NC_009831.1 KEGG: slo:Shew_1615 ABC transporter-related protein; ABC transporter-like protein 3166845 5610949 Ssed_2613 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001474348.1 3165946 D 425104 CDS YP_001474349.1 157375749 5610735 complement(3167275..3167481) 1 NC_009831.1 KEGG: slo:Shew_1614 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3167481 5610735 Ssed_2614 Shewanella sediminis HAW-EB3 cold-shock DNA-binding domain-containing protein YP_001474349.1 3167275 R 425104 CDS YP_001474350.1 157375750 5610736 complement(3167782..3168597) 1 NC_009831.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase 3168597 rrmA 5610736 rrmA Shewanella sediminis HAW-EB3 23S rRNA methyltransferase YP_001474350.1 3167782 R 425104 CDS YP_001474351.1 157375751 5610737 complement(3168618..3169439) 1 NC_009831.1 KEGG: slo:Shew_1612 hypothetical protein; hypothetical protein 3169439 5610737 Ssed_2616 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474351.1 3168618 R 425104 CDS YP_001474352.1 157375752 5610738 3169751..3171163 1 NC_009831.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 3171163 sbcB 5610738 sbcB Shewanella sediminis HAW-EB3 exonuclease I YP_001474352.1 3169751 D 425104 CDS YP_001474353.1 157375753 5610674 3171260..3172150 1 NC_009831.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 3172150 5610674 Ssed_2618 Shewanella sediminis HAW-EB3 cytidine deaminase YP_001474353.1 3171260 D 425104 CDS YP_001474354.1 157375754 5610675 complement(3172222..3173097) 1 NC_009831.1 KEGG: slo:Shew_1609 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 3173097 5610675 Ssed_2619 Shewanella sediminis HAW-EB3 6-phosphogluconate dehydrogenase YP_001474354.1 3172222 R 425104 CDS YP_001474355.1 157375755 5610676 complement(3173214..3173696) 1 NC_009831.1 KEGG: saz:Sama_1977 cytosolic long-chain acyl-CoA thioester hydrolase family protein; cytosolic long-chain acyl-CoA thioester hydrolase family protein 3173696 5610676 Ssed_2620 Shewanella sediminis HAW-EB3 cytosolic long-chain acyl-CoA thioester hydrolase family protein YP_001474355.1 3173214 R 425104 CDS YP_001474356.1 157375756 5610677 complement(3173793..3174161) 1 NC_009831.1 KEGG: spc:Sputcn32_1585 hypothetical protein; hypothetical protein 3174161 5610677 Ssed_2621 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474356.1 3173793 R 425104 CDS YP_001474357.1 157375757 5613646 complement(3174446..3175702) 1 NC_009831.1 KEGG: son:SO2774 3-oxoacyl-(acyl-carrier-protein) synthase II; 3-oxoacyl-ACP synthase 3175702 5613646 Ssed_2622 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP synthase YP_001474357.1 3174446 R 425104 CDS YP_001474358.1 157375758 5613647 complement(3175910..3176143) 1 NC_009831.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 3176143 acpP 5613647 acpP Shewanella sediminis HAW-EB3 acyl carrier protein YP_001474358.1 3175910 R 425104 CDS YP_001474359.1 157375759 5613648 complement(3176303..3177049) 1 NC_009831.1 KEGG: slo:Shew_1603 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 3177049 5613648 Ssed_2624 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP reductase YP_001474359.1 3176303 R 425104 CDS YP_001474360.1 157375760 5613649 complement(3177059..3177988) 1 NC_009831.1 KEGG: she:Shewmr4_2397 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 3177988 5613649 Ssed_2625 Shewanella sediminis HAW-EB3 malonyl CoA-acyl carrier protein transacylase YP_001474360.1 3177059 R 425104 CDS YP_001474361.1 157375761 5613232 complement(3178039..3178998) 1 NC_009831.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3178998 5613232 Ssed_2626 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP synthase YP_001474361.1 3178039 R 425104 CDS YP_001474362.1 157375762 5613233 complement(3179010..3180038) 1 NC_009831.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 3180038 5613233 Ssed_2627 Shewanella sediminis HAW-EB3 glycerol-3-phosphate acyltransferase PlsX YP_001474362.1 3179010 R 425104 CDS YP_001474363.1 157375763 5613234 complement(3180054..3180224) 1 NC_009831.1 KEGG: sfr:Sfri_1495 ribosomal protein L32; 50S ribosomal protein L32 3180224 5613234 Ssed_2628 Shewanella sediminis HAW-EB3 50S ribosomal protein L32 YP_001474363.1 3180054 R 425104 CDS YP_001474364.1 157375764 5613614 complement(3180242..3180766) 1 NC_009831.1 KEGG: slo:Shew_1598 protein of unknown function DUF177; hypothetical protein 3180766 5613614 Ssed_2629 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474364.1 3180242 R 425104 CDS YP_001474365.1 157375765 5613615 3181104..3181694 1 NC_009831.1 KEGG: shm:Shewmr7_2472 maf protein; maf protein 3181694 5613615 Ssed_2630 Shewanella sediminis HAW-EB3 maf protein YP_001474365.1 3181104 D 425104 CDS YP_001474366.1 157375766 5613616 3181823..3183226 1 NC_009831.1 KEGG: slo:Shew_1596 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 3183226 5613616 Ssed_2631 Shewanella sediminis HAW-EB3 PAS/PAC sensor-containing diguanylate cyclase YP_001474366.1 3181823 D 425104 CDS YP_001474367.1 157375767 5613617 complement(3183337..3183987) 1 NC_009831.1 KEGG: slo:Shew_1595 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 3183987 5613617 Ssed_2632 Shewanella sediminis HAW-EB3 HAD family hydrolase YP_001474367.1 3183337 R 425104 CDS YP_001474368.1 157375768 5613160 complement(3183984..3184961) 1 NC_009831.1 KEGG: slo:Shew_1594 pseudouridine synthase, RluA family; lysozyme 3184961 5613160 Ssed_2633 Shewanella sediminis HAW-EB3 lysozyme YP_001474368.1 3183984 R 425104 CDS YP_001474369.1 157375769 5613161 3185535..3189140 1 NC_009831.1 KEGG: slo:Shew_1593 ribonuclease, Rne/Rng family; ribonuclease 3189140 5613161 Ssed_2634 Shewanella sediminis HAW-EB3 ribonuclease YP_001474369.1 3185535 D 425104 CDS YP_001474370.1 157375770 5613162 3189273..3190829 1 NC_009831.1 KEGG: slo:Shew_1592 sulphate transporter; sulfate transporter 3190829 5613162 Ssed_2635 Shewanella sediminis HAW-EB3 sulfate transporter YP_001474370.1 3189273 D 425104 CDS YP_001474371.1 157375771 5613163 complement(3190899..3191804) 1 NC_009831.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein 3191804 5613163 Ssed_2636 Shewanella sediminis HAW-EB3 bifunctional methionine sulfoxide reductase B/A protein YP_001474371.1 3190899 R 425104 CDS YP_001474372.1 157375772 5613094 3192091..3192963 1 NC_009831.1 KEGG: slo:Shew_1590 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 3192963 5613094 Ssed_2637 Shewanella sediminis HAW-EB3 2OG-Fe(II) oxygenase YP_001474372.1 3192091 D 425104 CDS YP_001474373.1 157375773 5613095 3193154..3194092 1 NC_009831.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 3194092 rbgA 5613095 rbgA Shewanella sediminis HAW-EB3 ribosomal biogenesis GTPase YP_001474373.1 3193154 D 425104 CDS YP_001474374.1 157375774 5613096 complement(3194284..3195129) 1 NC_009831.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 3195129 5613096 Ssed_2639 Shewanella sediminis HAW-EB3 DNA ligase YP_001474374.1 3194284 R 425104 CDS YP_001474375.1 157375775 5613097 3195447..3195818 1 NC_009831.1 KEGG: shn:Shewana3_2402 diacylglycerol kinase; diacylglycerol kinase 3195818 5613097 Ssed_2640 Shewanella sediminis HAW-EB3 diacylglycerol kinase YP_001474375.1 3195447 D 425104 CDS YP_001474376.1 157375776 5612876 3196098..3196979 1 NC_009831.1 KEGG: slo:Shew_1585 hypothetical protein; hypothetical protein 3196979 5612876 Ssed_2641 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474376.1 3196098 D 425104 CDS YP_001474377.1 157375777 5612877 3197324..3197758 1 NC_009831.1 hypothetical protein 3197758 5612877 Ssed_2642 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474377.1 3197324 D 425104 CDS YP_001474378.1 157375778 5612878 complement(3197825..3199051) 1 NC_009831.1 KEGG: slo:Shew_1584 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 3199051 5612878 Ssed_2643 Shewanella sediminis HAW-EB3 nucleoside recognition domain-containing protein YP_001474378.1 3197825 R 425104 CDS YP_001474379.1 157375779 5612879 3199274..3200710 1 NC_009831.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 3200710 yebU 5612879 yebU Shewanella sediminis HAW-EB3 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_001474379.1 3199274 D 425104 CDS YP_001474380.1 157375780 5612755 complement(3200913..3201701) 1 NC_009831.1 KEGG: sbl:Sbal_2456 hydrolase, TatD family; TatD family hydrolase 3201701 5612755 Ssed_2645 Shewanella sediminis HAW-EB3 TatD family hydrolase YP_001474380.1 3200913 R 425104 CDS YP_001474381.1 157375781 5612756 complement(3201814..3202140) 1 NC_009831.1 KEGG: slo:Shew_1581 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3202140 5612756 Ssed_2646 Shewanella sediminis HAW-EB3 type IV pilus assembly PilZ YP_001474381.1 3201814 R 425104 CDS YP_001474382.1 157375782 5612757 complement(3202148..3203062) 1 NC_009831.1 KEGG: slo:Shew_1580 DNA polymerase III, delta prime subunit; DNA-directed DNA polymerase 3203062 5612757 Ssed_2647 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001474382.1 3202148 R 425104 CDS YP_001474383.1 157375783 5612681 complement(3203062..3203694) 1 NC_009831.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 3203694 tmk 5612681 tmk Shewanella sediminis HAW-EB3 thymidylate kinase YP_001474383.1 3203062 R 425104 CDS YP_001474384.1 157375784 5612682 complement(3203691..3204698) 1 NC_009831.1 KEGG: slo:Shew_1578 aminodeoxychorismate lyase; aminodeoxychorismate lyase 3204698 5612682 Ssed_2649 Shewanella sediminis HAW-EB3 aminodeoxychorismate lyase YP_001474384.1 3203691 R 425104 CDS YP_001474385.1 157375785 5612683 complement(3204695..3205510) 1 NC_009831.1 KEGG: sbl:Sbal_2461 aminotransferase, class IV; aminotransferase, class IV 3205510 5612683 Ssed_2650 Shewanella sediminis HAW-EB3 aminotransferase, class IV YP_001474385.1 3204695 R 425104 CDS YP_001474386.1 157375786 5612684 complement(3205764..3206399) 1 NC_009831.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 3206399 5612684 Ssed_2651 Shewanella sediminis HAW-EB3 uridine kinase YP_001474386.1 3205764 R 425104 CDS YP_001474387.1 157375787 5612597 complement(3206412..3207527) 1 NC_009831.1 KEGG: spc:Sputcn32_2219 ATP-binding protein, Mrp/Nbp35 family; ATP-binding Mrp/Nbp35 family protein 3207527 5612597 Ssed_2652 Shewanella sediminis HAW-EB3 ATP-binding Mrp/Nbp35 family protein YP_001474387.1 3206412 R 425104 CDS YP_001474388.1 157375788 5612598 3207689..3209767 1 NC_009831.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3209767 metG 5612598 metG Shewanella sediminis HAW-EB3 methionyl-tRNA synthetase YP_001474388.1 3207689 D 425104 CDS YP_001474389.1 157375789 5612599 complement(3209934..3211517) 1 NC_009831.1 KEGG: nmc:NMC1969 adhesin/invasin; hypothetical protein 3211517 5612599 Ssed_2654 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474389.1 3209934 R 425104 CDS YP_001474390.1 157375790 5612600 complement(3211776..3212276) 1 NC_009831.1 KEGG: shn:Shewana3_2415 CreA family protein; CreA family protein 3212276 5612600 Ssed_2655 Shewanella sediminis HAW-EB3 CreA family protein YP_001474390.1 3211776 R 425104 CDS YP_001474391.1 157375791 5612623 complement(3212276..3213655) 1 NC_009831.1 KEGG: slo:Shew_1787 hypothetical protein; chaperone 3213655 5612623 Ssed_2656 Shewanella sediminis HAW-EB3 chaperone YP_001474391.1 3212276 R 425104 CDS YP_001474392.1 157375792 5612624 complement(3213832..3214341) 1 NC_009831.1 KEGG: pin:Ping_2839 YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 3214341 5612624 Ssed_2657 Shewanella sediminis HAW-EB3 prolyl-tRNA synthetase YP_001474392.1 3213832 R 425104 CDS YP_001474393.1 157375793 5612625 3214488..3215993 1 NC_009831.1 KEGG: sdn:Sden_2190 protein of unknown function DUF107; hypothetical protein 3215993 5612625 Ssed_2658 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474393.1 3214488 D 425104 CDS YP_001474394.1 157375794 5612626 3215974..3216774 1 NC_009831.1 KEGG: slo:Shew_1785 band 7 protein; hypothetical protein 3216774 5612626 Ssed_2659 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474394.1 3215974 D 425104 CDS YP_001474395.1 157375795 5612396 complement(3216929..3217909) 1 NC_009831.1 KEGG: sbl:Sbal_2378 rhodanese domain protein; rhodanese domain-containing protein 3217909 5612396 Ssed_2660 Shewanella sediminis HAW-EB3 rhodanese domain-containing protein YP_001474395.1 3216929 R 425104 CDS YP_001474396.1 157375796 5612397 3218127..3218786 1 NC_009831.1 KEGG: slo:Shew_1780 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 3218786 5612397 Ssed_2661 Shewanella sediminis HAW-EB3 glutathione S-transferase domain-containing protein YP_001474396.1 3218127 D 425104 CDS YP_001474397.1 157375797 5612398 3218884..3219840 1 NC_009831.1 KEGG: noc:Noc_0394 protein of unknown function DUF523; hypothetical protein 3219840 5612398 Ssed_2662 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474397.1 3218884 D 425104 CDS YP_001474398.1 157375798 5612585 3219837..3220340 1 NC_009831.1 KEGG: bja:bll5189 hypothetical protein; hypothetical protein 3220340 5612585 Ssed_2663 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474398.1 3219837 D 425104 CDS YP_001474399.1 157375799 5612586 3220467..3221099 1 NC_009831.1 KEGG: slo:Shew_2370 methyltransferase type 11; type 11 methyltransferase 3221099 5612586 Ssed_2664 Shewanella sediminis HAW-EB3 type 11 methyltransferase YP_001474399.1 3220467 D 425104 CDS YP_001474400.1 157375800 5612587 3221481..3222707 1 NC_009831.1 KEGG: slo:Shew_1777 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 3222707 5612587 Ssed_2665 Shewanella sediminis HAW-EB3 Bcr/CflA subfamily drug resistance transporter YP_001474400.1 3221481 D 425104 CDS YP_001474401.1 157375801 5612588 3223270..3224991 1 NC_009831.1 KEGG: slo:Shew_1776 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase 3 catalytic subunit 3224991 5612588 Ssed_2666 Shewanella sediminis HAW-EB3 acetolactate synthase 3 catalytic subunit YP_001474401.1 3223270 D 425104 CDS YP_001474402.1 157375802 5612338 3224991..3225485 1 NC_009831.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 3225485 ilvH 5612338 ilvH Shewanella sediminis HAW-EB3 acetolactate synthase 3 regulatory subunit YP_001474402.1 3224991 D 425104 CDS YP_001474403.1 157375803 5612339 complement(3225605..3226048) 1 NC_009831.1 KEGG: slo:Shew_2134 heat shock protein HSP20; heat shock protein Hsp20 3226048 5612339 Ssed_2668 Shewanella sediminis HAW-EB3 heat shock protein Hsp20 YP_001474403.1 3225605 R 425104 CDS YP_001474404.1 157375804 5612340 complement(3226352..3228061) 1 NC_009831.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 3228061 ushA 5612340 ushA Shewanella sediminis HAW-EB3 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_001474404.1 3226352 R 425104 CDS YP_001474405.1 157375805 5612341 complement(3228427..3229098) 1 NC_009831.1 KEGG: sdn:Sden_2138 carboxylesterase; carboxylesterase 3229098 5612341 Ssed_2670 Shewanella sediminis HAW-EB3 carboxylesterase YP_001474405.1 3228427 R 425104 CDS YP_001474406.1 157375806 5612213 3229267..3230280 1 NC_009831.1 KEGG: slo:Shew_2137 glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein 3230280 5612213 Ssed_2671 Shewanella sediminis HAW-EB3 glutathione S-transferase domain-containing protein YP_001474406.1 3229267 D 425104 CDS YP_001474407.1 157375807 5612214 complement(3230353..3230574) 1 NC_009831.1 KEGG: slo:Shew_2138 hypothetical protein; hypothetical protein 3230574 5612214 Ssed_2672 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474407.1 3230353 R 425104 CDS YP_001474408.1 157375808 5612215 complement(3230661..3231143) 1 NC_009831.1 KEGG: slo:Shew_2139 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 3231143 5612215 Ssed_2673 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001474408.1 3230661 R 425104 CDS YP_001474409.1 157375809 5612216 complement(3231227..3232099) 1 NC_009831.1 KEGG: slo:Shew_2140 hypothetical protein; hypothetical protein 3232099 5612216 Ssed_2674 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474409.1 3231227 R 425104 CDS YP_001474410.1 157375810 5612240 complement(3232271..3233404) 1 NC_009831.1 KEGG: slo:Shew_2141 lytic murein transglycosylase; lytic murein transglycosylase 3233404 5612240 Ssed_2675 Shewanella sediminis HAW-EB3 lytic murein transglycosylase YP_001474410.1 3232271 R 425104 CDS YP_001474411.1 157375811 5612241 3233713..3234072 1 NC_009831.1 KEGG: sdn:Sden_2142 hypothetical protein; hypothetical protein 3234072 5612241 Ssed_2676 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474411.1 3233713 D 425104 CDS YP_001474412.1 157375812 5612242 3234190..3234855 1 NC_009831.1 KEGG: slo:Shew_2143 hypothetical protein; hypothetical protein 3234855 5612242 Ssed_2677 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474412.1 3234190 D 425104 CDS YP_001474413.1 157375813 5612243 complement(3234891..3235829) 1 NC_009831.1 KEGG: slo:Shew_2144 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein 3235829 5612243 Ssed_2678 Shewanella sediminis HAW-EB3 response regulator receiver modulated CheW protein YP_001474413.1 3234891 R 425104 CDS YP_001474414.1 157375814 5611855 3236818..3236991 1 NC_009831.1 KEGG: shm:Shewmr7_2349 hypothetical protein; hypothetical protein 3236991 5611855 Ssed_2679 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474414.1 3236818 D 425104 CDS YP_001474415.1 157375815 5611856 complement(3237320..3238243) 1 NC_009831.1 KEGG: slo:Shew_2147 hypothetical protein; hypothetical protein 3238243 5611856 Ssed_2680 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474415.1 3237320 R 425104 CDS YP_001474416.1 157375816 5611857 3238446..3238853 1 NC_009831.1 KEGG: shw:Sputw3181_1678 protein of unknown function DUF307; hypothetical protein 3238853 5611857 Ssed_2681 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474416.1 3238446 D 425104 CDS YP_001474417.1 157375817 5612130 complement(3238913..3239620) 1 NC_009831.1 KEGG: slo:Shew_2149 conserved hypothetical ABC transporter protein; ABC transporter 3239620 5612130 Ssed_2682 Shewanella sediminis HAW-EB3 ABC transporter YP_001474417.1 3238913 R 425104 CDS YP_001474418.1 157375818 5612131 3239834..3240085 1 NC_009831.1 KEGG: slo:Shew_2150 integral membrane protein TerC; integral membrane protein TerC 3240085 5612131 Ssed_2683 Shewanella sediminis HAW-EB3 integral membrane protein TerC YP_001474418.1 3239834 D 425104 CDS YP_001474419.1 157375819 5612132 3240316..3241308 1 NC_009831.1 KEGG: shm:Shewmr7_2292 cytochrome-c peroxidase; cytochrome-c peroxidase 3241308 5612132 Ssed_2684 Shewanella sediminis HAW-EB3 cytochrome-c peroxidase YP_001474419.1 3240316 D 425104 CDS YP_001474420.1 157375820 5612133 complement(3241402..3241758) 1 NC_009831.1 KEGG: spc:Sputcn32_1678 hypothetical protein; hypothetical protein 3241758 5612133 Ssed_2685 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474420.1 3241402 R 425104 CDS YP_001474421.1 157375821 5611833 complement(3242185..3243078) 1 NC_009831.1 KEGG: slo:Shew_2153 transcriptional regulator, LysR family; LysR family transcriptional regulator 3243078 5611833 Ssed_2686 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474421.1 3242185 R 425104 CDS YP_001474422.1 157375822 5611834 3243301..3244341 1 NC_009831.1 KEGG: slo:Shew_2155 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 3244341 5611834 Ssed_2687 Shewanella sediminis HAW-EB3 4-hydroxyphenylpyruvate dioxygenase YP_001474422.1 3243301 D 425104 CDS YP_001474423.1 157375823 5611835 3244470..3245087 1 NC_009831.1 KEGG: slo:Shew_2156 lysine exporter protein (LysE/YggA); lysine exporter protein (LysE/YggA) 3245087 5611835 Ssed_2688 Shewanella sediminis HAW-EB3 lysine exporter protein (LysE/YggA) YP_001474423.1 3244470 D 425104 CDS YP_001474424.1 157375824 5611836 3245349..3247097 1 NC_009831.1 KEGG: she:Shewmr4_2297 gamma-glutamyltransferase; gamma-glutamyltransferase 3247097 5611836 Ssed_2689 Shewanella sediminis HAW-EB3 gamma-glutamyltransferase YP_001474424.1 3245349 D 425104 CDS YP_001474425.1 157375825 5611803 complement(3247167..3248741) 1 NC_009831.1 KEGG: slo:Shew_2159 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor 3248741 5611803 Ssed_2690 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor YP_001474425.1 3247167 R 425104 CDS YP_001474426.1 157375826 5611804 complement(3249030..3250634) 1 NC_009831.1 KEGG: she:Shewmr4_2301 dipeptidase; hypothetical protein 3250634 5611804 Ssed_2691 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474426.1 3249030 R 425104 CDS YP_001474427.1 157375827 5611805 3250824..3253004 1 NC_009831.1 KEGG: slo:Shew_2161 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 3253004 5611805 Ssed_2692 Shewanella sediminis HAW-EB3 peptidyl-dipeptidase Dcp YP_001474427.1 3250824 D 425104 CDS YP_001474428.1 157375828 5611806 3253121..3253726 1 NC_009831.1 KEGG: shw:Sputw3181_1832 protein of unknown function DUF938; hypothetical protein 3253726 5611806 Ssed_2693 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474428.1 3253121 D 425104 CDS YP_001474429.1 157375829 5611782 3254311..3256446 1 NC_009831.1 KEGG: tde:TDE0870 phosphatase/nucleotidase; phosphatase/nucleotidase 3256446 5611782 Ssed_2694 Shewanella sediminis HAW-EB3 phosphatase/nucleotidase YP_001474429.1 3254311 D 425104 CDS YP_001474430.1 157375830 5611783 3256489..3257793 1 NC_009831.1 KEGG: tde:TDE0869 hypothetical protein; hypothetical protein 3257793 5611783 Ssed_2695 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474430.1 3256489 D 425104 CDS YP_001474431.1 157375831 5611784 complement(3257943..3259733) 1 NC_009831.1 KEGG: sfr:Sfri_2744 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 3259733 5611784 Ssed_2696 Shewanella sediminis HAW-EB3 acyl-CoA dehydrogenase YP_001474431.1 3257943 R 425104 CDS YP_001474432.1 157375832 5611763 3260001..3260849 1 NC_009831.1 KEGG: slo:Shew_2165 aldose 1-epimerase; aldose 1-epimerase 3260849 5611763 Ssed_2697 Shewanella sediminis HAW-EB3 aldose 1-epimerase YP_001474432.1 3260001 D 425104 CDS YP_001474433.1 157375833 5611764 3261389..3265006 1 NC_009831.1 KEGG: sbl:Sbal_2434 hypothetical protein; hypothetical protein 3265006 5611764 Ssed_2698 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474433.1 3261389 D 425104 CDS YP_001474434.1 157375834 5611765 3265185..3265385 1 NC_009831.1 KEGG: slo:Shew_2167 hypothetical protein; hypothetical protein 3265385 5611765 Ssed_2699 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474434.1 3265185 D 425104 CDS YP_001474435.1 157375835 5611766 3265413..3265733 1 NC_009831.1 KEGG: slo:Shew_2168 uncharacterized conserved protein UCP025560; hypothetical protein 3265733 5611766 Ssed_2700 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474435.1 3265413 D 425104 CDS YP_001474436.1 157375836 5612808 3266051..3267352 1 NC_009831.1 KEGG: vfi:VF2354 anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 3267352 5612808 Ssed_2701 Shewanella sediminis HAW-EB3 anaerobic C4-dicarboxylate transporter YP_001474436.1 3266051 D 425104 CDS YP_001474437.1 157375837 5612809 complement(3267500..3267922) 1 NC_009831.1 KEGG: shm:Shewmr7_1182 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3267922 5612809 Ssed_2702 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001474437.1 3267500 R 425104 CDS YP_001474438.1 157375838 5612810 complement(3268033..3268548) 1 NC_009831.1 KEGG: shm:Shewmr7_1183 hypothetical protein; hypothetical protein 3268548 5612810 Ssed_2703 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474438.1 3268033 R 425104 CDS YP_001474439.1 157375839 5612811 3269034..3269972 1 NC_009831.1 KEGG: maq:Maqu_0074 initiation factor 2B related; initiation factor 2B related 3269972 5612811 Ssed_2704 Shewanella sediminis HAW-EB3 initiation factor 2B related YP_001474439.1 3269034 D 425104 CDS YP_001474440.1 157375840 5614088 complement(3270042..3270902) 1 NC_009831.1 KEGG: reu:Reut_B5117 regulatory protein, LysR:LysR, substrate-binding; regulatory protein LysR 3270902 5614088 Ssed_2705 Shewanella sediminis HAW-EB3 regulatory protein LysR YP_001474440.1 3270042 R 425104 CDS YP_001474441.1 157375841 5614089 complement(3271038..3272135) 1 NC_009831.1 KEGG: son:SO3298 hypothetical protein; hypothetical protein 3272135 5614089 Ssed_2706 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474441.1 3271038 R 425104 CDS YP_001474442.1 157375842 5614090 complement(3272230..3273459) 1 NC_009831.1 KEGG: pca:Pcar_1087 NADH:flavin oxidoreductase, Old Yellow enzyme family; NADH:flavin oxidoreductase 3273459 5614090 Ssed_2707 Shewanella sediminis HAW-EB3 NADH:flavin oxidoreductase YP_001474442.1 3272230 R 425104 CDS YP_001474443.1 157375843 5614091 complement(3273480..3273890) 1 NC_009831.1 KEGG: dde:Dde_3182 cytochrome c3; cytochrome c3 3273890 5614091 Ssed_2708 Shewanella sediminis HAW-EB3 cytochrome c3 YP_001474443.1 3273480 R 425104 CDS YP_001474444.1 157375844 5613171 3274550..3274933 1 NC_009831.1 KEGG: sfr:Sfri_2098 lactoylglutathione lyase; lactoylglutathione lyase 3274933 5613171 Ssed_2709 Shewanella sediminis HAW-EB3 lactoylglutathione lyase YP_001474444.1 3274550 D 425104 CDS YP_001474445.1 157375845 5613172 3274951..3276051 1 NC_009831.1 KEGG: sfr:Sfri_2099 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 3276051 5613172 Ssed_2710 Shewanella sediminis HAW-EB3 NADH:flavin oxidoreductase YP_001474445.1 3274951 D 425104 CDS YP_001474446.1 157375846 5613173 3276264..3277166 1 NC_009831.1 KEGG: pin:Ping_2149 hypothetical transmembrane protein DUF6; hypothetical protein 3277166 5613173 Ssed_2711 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474446.1 3276264 D 425104 CDS YP_001474447.1 157375847 5613174 complement(3277498..3278970) 1 NC_009831.1 KEGG: sbl:Sbal_2317 RNA-directed DNA polymerase; RNA-directed DNA polymerase 3278970 5613174 Ssed_2712 Shewanella sediminis HAW-EB3 RNA-directed DNA polymerase YP_001474447.1 3277498 R 425104 CDS YP_001474448.1 157375848 5611197 complement(3279644..3280129) 1 NC_009831.1 KEGG: ppr:PBPRA1446 lactoylglutathione lyase; lactoylglutathione lyase 3280129 5611197 Ssed_2713 Shewanella sediminis HAW-EB3 lactoylglutathione lyase YP_001474448.1 3279644 R 425104 CDS YP_001474449.1 157375849 5611198 complement(3280216..3280398) 1 NC_009831.1 hypothetical protein 3280398 5611198 Ssed_2714 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474449.1 3280216 R 425104 CDS YP_001474450.1 157375850 5611199 3280723..3281742 1 NC_009831.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 3281742 5611199 Ssed_2715 Shewanella sediminis HAW-EB3 adenosine deaminase YP_001474450.1 3280723 D 425104 CDS YP_001474451.1 157375851 5611210 complement(3282089..3282502) 1 NC_009831.1 KEGG: ilo:IL0305 MutT/NUDIX family protein; MutT/NUDIX family protein 3282502 5611210 Ssed_2716 Shewanella sediminis HAW-EB3 MutT/NUDIX family protein YP_001474451.1 3282089 R 425104 CDS YP_001474452.1 157375852 5611211 complement(3282624..3283061) 1 NC_009831.1 KEGG: vfi:VFA0662 acetyltransferase; acetyltransferase 3283061 5611211 Ssed_2717 Shewanella sediminis HAW-EB3 acetyltransferase YP_001474452.1 3282624 R 425104 CDS YP_001474453.1 157375853 5611212 complement(3283252..3283464) 1 NC_009831.1 KEGG: pat:Patl_1948 protein of unknown function DUF1568; hypothetical protein 3283464 5611212 Ssed_2718 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474453.1 3283252 R 425104 CDS YP_001474454.1 157375854 5611213 3283759..3284502 1 NC_009831.1 KEGG: sfr:Sfri_1258 hypothetical protein; hypothetical protein 3284502 5611213 Ssed_2719 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474454.1 3283759 D 425104 CDS YP_001474455.1 157375855 5611204 complement(3284507..3285778) 1 NC_009831.1 KEGG: cps:CPS_2523 sensor histidine kinase; sensor histidine kinase 3285778 5611204 Ssed_2720 Shewanella sediminis HAW-EB3 sensor histidine kinase YP_001474455.1 3284507 R 425104 CDS YP_001474456.1 157375856 5611205 complement(3285768..3286469) 1 NC_009831.1 KEGG: cps:CPS_2524 DNA-binding response regulator; DNA-binding response regulator 3286469 5611205 Ssed_2721 Shewanella sediminis HAW-EB3 DNA-binding response regulator YP_001474456.1 3285768 R 425104 CDS YP_001474457.1 157375857 5611206 complement(3286589..3287725) 1 NC_009831.1 KEGG: sde:Sde_3438 intracellular protease/amidase-like; intracellular protease/amidase-like protein 3287725 5611206 Ssed_2722 Shewanella sediminis HAW-EB3 intracellular protease/amidase-like protein YP_001474457.1 3286589 R 425104 CDS YP_001474458.1 157375858 5611207 complement(3287790..3290273) 1 NC_009831.1 KEGG: cps:CPS_2526 permease; permease 3290273 5611207 Ssed_2723 Shewanella sediminis HAW-EB3 permease YP_001474458.1 3287790 R 425104 CDS YP_001474459.1 157375859 5614104 complement(3290273..3290950) 1 NC_009831.1 KEGG: cps:CPS_2527 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 3290950 5614104 Ssed_2724 Shewanella sediminis HAW-EB3 ABC transporter ATP-binding protein YP_001474459.1 3290273 R 425104 CDS YP_001474460.1 157375860 5614105 complement(3291213..3291671) 1 NC_009831.1 hypothetical protein 3291671 5614105 Ssed_2725 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474460.1 3291213 R 425104 CDS YP_001474461.1 157375861 5614106 complement(3291996..3292154) 1 NC_009831.1 KEGG: pat:Patl_1948 protein of unknown function DUF1568; hypothetical protein 3292154 5614106 Ssed_2726 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474461.1 3291996 R 425104 CDS YP_001474462.1 157375862 5614107 complement(3292248..3294071) 1 NC_009831.1 KEGG: saz:Sama_1111 ATP-dependent endonuclease of the OLD family; ATP-dependent OLD family endonuclease 3294071 5614107 Ssed_2727 Shewanella sediminis HAW-EB3 ATP-dependent OLD family endonuclease YP_001474462.1 3292248 R 425104 CDS YP_001474463.1 157375863 5611239 complement(3294791..3295483) 1 NC_009831.1 KEGG: dps:DP1920 hypothetical protein; hypothetical protein 3295483 5611239 Ssed_2728 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474463.1 3294791 R 425104 CDS YP_001474464.1 157375864 5611240 complement(3295599..3296162) 1 NC_009831.1 KEGG: ppr:PBPRA2808 hypothetical phosphoesterase; phosphodiesterase 3296162 5611240 Ssed_2729 Shewanella sediminis HAW-EB3 phosphodiesterase YP_001474464.1 3295599 R 425104 CDS YP_001474465.1 157375865 5611241 complement(3296284..3297891) 1 NC_009831.1 KEGG: mxa:MXAN_5879 sigma-54 dependent transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 3297891 5611241 Ssed_2730 Shewanella sediminis HAW-EB3 sigma-54 dependent trancsriptional regulator YP_001474465.1 3296284 R 425104 CDS YP_001474466.1 157375866 5613810 3298578..3300101 1 NC_009831.1 KEGG: eca:ECA0910 flavoprotein subunit of a reductase; flavoprotein subunit of a reductase 3300101 5613810 Ssed_2731 Shewanella sediminis HAW-EB3 flavoprotein subunit of a reductase YP_001474466.1 3298578 D 425104 CDS YP_001474467.1 157375867 5613811 3300163..3301068 1 NC_009831.1 KEGG: sat:SYN_00385 hypothetical protein; hypothetical protein 3301068 5613811 Ssed_2732 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474467.1 3300163 D 425104 CDS YP_001474468.1 157375868 5613812 3301602..3302834 1 NC_009831.1 KEGG: vpa:VP1425 alcohol dehydrogenase; alcohol dehydrogenase 3302834 5613812 Ssed_2733 Shewanella sediminis HAW-EB3 alcohol dehydrogenase YP_001474468.1 3301602 D 425104 CDS YP_001474469.1 157375869 5613813 complement(3302987..3304051) 1 NC_009831.1 KEGG: slo:Shew_2701 hypothetical protein; hypothetical protein 3304051 5613813 Ssed_2734 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474469.1 3302987 R 425104 CDS YP_001474470.1 157375870 5610323 complement(3304398..3305462) 1 NC_009831.1 KEGG: ppr:PBPRB1179 hypothetical protein; hypothetical protein 3305462 5610323 Ssed_2735 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474470.1 3304398 R 425104 CDS YP_001474471.1 157375871 5610324 complement(3305833..3307089) 1 NC_009831.1 KEGG: saz:Sama_1472 ABC transporter permease; ABC transporter permease 3307089 5610324 Ssed_2736 Shewanella sediminis HAW-EB3 ABC transporter permease YP_001474471.1 3305833 R 425104 CDS YP_001474472.1 157375872 5610325 complement(3307086..3308348) 1 NC_009831.1 KEGG: saz:Sama_1471 membrane-fusion protein; membrane-fusion protein 3308348 5610325 Ssed_2737 Shewanella sediminis HAW-EB3 membrane-fusion protein YP_001474472.1 3307086 R 425104 CDS YP_001474473.1 157375873 5610326 complement(3308345..3309544) 1 NC_009831.1 KEGG: saz:Sama_1470 membrane-fusion protein; membrane-fusion protein 3309544 5610326 Ssed_2738 Shewanella sediminis HAW-EB3 membrane-fusion protein YP_001474473.1 3308345 R 425104 CDS YP_001474474.1 157375874 5610151 complement(3309541..3310572) 1 NC_009831.1 KEGG: saz:Sama_1469 multidrug resistance efflux pump-like protein; multidrug resistance efflux pump-like protein 3310572 5610151 Ssed_2739 Shewanella sediminis HAW-EB3 multidrug resistance efflux pump-like protein YP_001474474.1 3309541 R 425104 CDS YP_001474475.1 157375875 5610152 complement(3310562..3311248) 1 NC_009831.1 KEGG: saz:Sama_1468 macrolide efflux ABC transporter, ATP-binding protein; macrolide efflux ABC transporter ATP-binding protein 3311248 5610152 Ssed_2740 Shewanella sediminis HAW-EB3 macrolide efflux ABC transporter ATP-binding protein YP_001474475.1 3310562 R 425104 CDS YP_001474476.1 157375876 5610153 complement(3311695..3312081) 1 NC_009831.1 KEGG: slo:Shew_1747 hypothetical protein; hypothetical protein 3312081 5610153 Ssed_2741 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474476.1 3311695 R 425104 CDS YP_001474477.1 157375877 5610154 complement(3312239..3312691) 1 NC_009831.1 KEGG: slo:Shew_1746 hypothetical protein; hypothetical protein 3312691 5610154 Ssed_2742 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474477.1 3312239 R 425104 CDS YP_001474478.1 157375878 5611136 complement(3312896..3313495) 1 NC_009831.1 KEGG: slo:Shew_1744 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3313495 5611136 Ssed_2743 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001474478.1 3312896 R 425104 CDS YP_001474479.1 157375879 5611137 complement(3313597..3314124) 1 NC_009831.1 KEGG: slo:Shew_1743 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3314124 5611137 Ssed_2744 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001474479.1 3313597 R 425104 CDS YP_001474480.1 157375880 5611138 3314183..3314812 1 NC_009831.1 KEGG: slo:Shew_1742 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 3314812 5611138 Ssed_2745 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001474480.1 3314183 D 425104 CDS YP_001474481.1 157375881 5611139 3314888..3315622 1 NC_009831.1 KEGG: slo:Shew_1741 beta-lactamase domain protein; beta-lactamase domain-containing protein 3315622 5611139 Ssed_2746 Shewanella sediminis HAW-EB3 beta-lactamase domain-containing protein YP_001474481.1 3314888 D 425104 CDS YP_001474482.1 157375882 5613949 complement(3315715..3316263) 1 NC_009831.1 KEGG: slo:Shew_1740 nitroreductase; nitroreductase 3316263 5613949 Ssed_2747 Shewanella sediminis HAW-EB3 nitroreductase YP_001474482.1 3315715 R 425104 CDS YP_001474483.1 157375883 5613950 complement(3316393..3316989) 1 NC_009831.1 KEGG: sbl:Sbal_1807 DoxX family protein; DoxX family protein 3316989 5613950 Ssed_2748 Shewanella sediminis HAW-EB3 DoxX family protein YP_001474483.1 3316393 R 425104 CDS YP_001474484.1 157375884 5613951 complement(3317129..3318166) 1 NC_009831.1 KEGG: slo:Shew_1738 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3318166 5613951 Ssed_2749 Shewanella sediminis HAW-EB3 aminoglycoside phosphotransferase YP_001474484.1 3317129 R 425104 CDS YP_001474485.1 157375885 5611973 complement(3318285..3318926) 1 NC_009831.1 KEGG: slo:Shew_1737 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 3318926 5611973 Ssed_2750 Shewanella sediminis HAW-EB3 nicotinamide mononucleotide transporter PnuC YP_001474485.1 3318285 R 425104 CDS YP_001474486.1 157375886 5611974 complement(3319029..3319289) 1 NC_009831.1 KEGG: sfr:Sfri_1527 hypothetical protein; hypothetical protein 3319289 5611974 Ssed_2751 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474486.1 3319029 R 425104 CDS YP_001474487.1 157375887 5611975 complement(3319397..3321607) 1 NC_009831.1 KEGG: slo:Shew_1735 TonB-dependent receptor; TonB-dependent receptor 3321607 5611975 Ssed_2752 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001474487.1 3319397 R 425104 CDS YP_001474488.1 157375888 5611976 complement(3321930..3322322) 1 NC_009831.1 KEGG: sbl:Sbal_1801 protein of unknown function DUF1425; hypothetical protein 3322322 5611976 Ssed_2753 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474488.1 3321930 R 425104 CDS YP_001474489.1 157375889 5611840 complement(3322376..3323380) 1 NC_009831.1 KEGG: spc:Sputcn32_1655 uncharacterized domain 1; hypothetical protein 3323380 5611840 Ssed_2754 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474489.1 3322376 R 425104 CDS YP_001474490.1 157375890 5611841 complement(3323397..3323753) 1 NC_009831.1 KEGG: shw:Sputw3181_2372 histidine triad (HIT) protein; histidine triad (HIT) protein 3323753 5611841 Ssed_2755 Shewanella sediminis HAW-EB3 histidine triad (HIT) protein YP_001474490.1 3323397 R 425104 CDS YP_001474491.1 157375891 5611842 3324325..3324738 1 NC_009831.1 hypothetical protein 3324738 5611842 Ssed_2756 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474491.1 3324325 D 425104 CDS YP_001474492.1 157375892 5611843 complement(3325128..3325478) 1 NC_009831.1 hypothetical protein 3325478 5611843 Ssed_2757 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474492.1 3325128 R 425104 CDS YP_001474493.1 157375893 5612007 complement(3325485..3325838) 1 NC_009831.1 hypothetical protein 3325838 5612007 Ssed_2758 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474493.1 3325485 R 425104 CDS YP_001474494.1 157375894 5612008 complement(3326072..3326707) 1 NC_009831.1 KEGG: saz:Sama_1446 response regulator receiver protein; response regulator receiver protein 3326707 5612008 Ssed_2759 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001474494.1 3326072 R 425104 CDS YP_001474495.1 157375895 5612009 complement(3327028..3328206) 1 NC_009831.1 KEGG: sbl:Sbal_1794 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3328206 5612009 Ssed_2760 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474495.1 3327028 R 425104 CDS YP_001474496.1 157375896 5612010 3328516..3328947 1 NC_009831.1 KEGG: cps:CPS_4793 hypothetical protein; hypothetical protein 3328947 5612010 Ssed_2761 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474496.1 3328516 D 425104 CDS YP_001474497.1 157375897 5612475 complement(3329135..3330955) 1 NC_009831.1 KEGG: sfr:Sfri_1512 serine/threonine protein kinase; serine/threonine protein kinase 3330955 5612475 Ssed_2762 Shewanella sediminis HAW-EB3 serine/threonine protein kinase YP_001474497.1 3329135 R 425104 CDS YP_001474498.1 157375898 5612476 complement(3331042..3332511) 1 NC_009831.1 KEGG: sfr:Sfri_1511 nitrite transporter; nitrite transporter 3332511 5612476 Ssed_2763 Shewanella sediminis HAW-EB3 nitrite transporter YP_001474498.1 3331042 R 425104 CDS YP_001474499.1 157375899 5612477 complement(3332512..3332847) 1 NC_009831.1 KEGG: sfr:Sfri_1510 nitrite reductase (NAD(P)H), small subunit; nitrite reductase (NAD(P)H) small subunit 3332847 5612477 Ssed_2764 Shewanella sediminis HAW-EB3 nitrite reductase (NAD(P)H) small subunit YP_001474499.1 3332512 R 425104 CDS YP_001474500.1 157375900 5612768 complement(3332844..3335516) 1 NC_009831.1 KEGG: sfr:Sfri_1509 nitrite reductase (NAD(P)H), large subunit; nitrite reductase (NAD(P)H) large subunit 3335516 5612768 Ssed_2765 Shewanella sediminis HAW-EB3 nitrite reductase (NAD(P)H) large subunit YP_001474500.1 3332844 R 425104 CDS YP_001474501.1 157375901 5612769 complement(3335947..3336543) 1 NC_009831.1 KEGG: sfr:Sfri_1508 response regulator receiver and ANTAR domain protein; response regulator 3336543 5612769 Ssed_2766 Shewanella sediminis HAW-EB3 response regulator YP_001474501.1 3335947 R 425104 CDS YP_001474502.1 157375902 5612770 complement(3336616..3337788) 1 NC_009831.1 KEGG: sfr:Sfri_1507 glycosyl transferase, family 3; glycosyl transferase family protein 3337788 5612770 Ssed_2767 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001474502.1 3336616 R 425104 CDS YP_001474503.1 157375903 5612771 complement(3337785..3338645) 1 NC_009831.1 KEGG: sfr:Sfri_1506 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 3338645 5612771 Ssed_2768 Shewanella sediminis HAW-EB3 uroporphyrin-III C-methyltransferase YP_001474503.1 3337785 R 425104 CDS YP_001474504.1 157375904 5612612 complement(3338999..3339346) 1 NC_009831.1 KEGG: slo:Shew_1724 cytochrome c3; cytochrome c3 3339346 5612612 Ssed_2769 Shewanella sediminis HAW-EB3 cytochrome c3 YP_001474504.1 3338999 R 425104 CDS YP_001474505.1 157375905 5612613 complement(3339740..3340603) 1 NC_009831.1 metalloprotease; heat shock protein HtpX 3340603 5612613 Ssed_2770 Shewanella sediminis HAW-EB3 heat shock protein HtpX YP_001474505.1 3339740 R 425104 CDS YP_001474506.1 157375906 5612614 3340883..3341626 1 NC_009831.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 3341626 5612614 Ssed_2771 Shewanella sediminis HAW-EB3 peptidase E YP_001474506.1 3340883 D 425104 CDS YP_001474507.1 157375907 5612615 complement(3341698..3343692) 1 NC_009831.1 KEGG: ppr:PBPRB1892 5'-nucleotidase; 5'-nucleotidase 3343692 5612615 Ssed_2772 Shewanella sediminis HAW-EB3 5'-nucleotidase YP_001474507.1 3341698 R 425104 CDS YP_001474508.1 157375908 5612410 complement(3344237..3344917) 1 NC_009831.1 KEGG: shm:Shewmr7_2428 dethiobiotin synthase; dethiobiotin synthase 3344917 5612410 Ssed_2773 Shewanella sediminis HAW-EB3 dethiobiotin synthase YP_001474508.1 3344237 R 425104 CDS YP_001474509.1 157375909 5612411 complement(3344928..3345728) 1 NC_009831.1 KEGG: shm:Shewmr7_2429 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 3345728 5612411 Ssed_2774 Shewanella sediminis HAW-EB3 biotin biosynthesis protein BioC YP_001474509.1 3344928 R 425104 CDS YP_001474510.1 157375910 5612412 complement(3345789..3346979) 1 NC_009831.1 KEGG: shm:Shewmr7_2430 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 3346979 5612412 Ssed_2775 Shewanella sediminis HAW-EB3 8-amino-7-oxononanoate synthase YP_001474510.1 3345789 R 425104 CDS YP_001474511.1 157375911 5612413 complement(3347008..3348072) 1 NC_009831.1 KEGG: slo:Shew_1719 biotin synthase; biotin synthase 3348072 5612413 Ssed_2776 Shewanella sediminis HAW-EB3 biotin synthase YP_001474511.1 3347008 R 425104 CDS YP_001474512.1 157375912 5613090 3348183..3349550 1 NC_009831.1 KEGG: sfr:Sfri_1474 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3349550 5613090 Ssed_2777 Shewanella sediminis HAW-EB3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001474512.1 3348183 D 425104 CDS YP_001474513.1 157375913 5613091 3349903..3351261 1 NC_009831.1 KEGG: slo:Shew_2533 gluconate transporter; gluconate transporter 3351261 5613091 Ssed_2778 Shewanella sediminis HAW-EB3 gluconate transporter YP_001474513.1 3349903 D 425104 CDS YP_001474514.1 157375914 5613092 3351379..3352563 1 NC_009831.1 KEGG: son:SO1770 glycerate kinase; glycerate kinase 3352563 5613092 Ssed_2779 Shewanella sediminis HAW-EB3 glycerate kinase YP_001474514.1 3351379 D 425104 CDS YP_001474515.1 157375915 5613093 3352760..3354412 1 NC_009831.1 KEGG: slo:Shew_2535 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 3354412 5613093 Ssed_2780 Shewanella sediminis HAW-EB3 pyridoxal-dependent decarboxylase YP_001474515.1 3352760 D 425104 CDS YP_001474516.1 157375916 5613137 complement(3354562..3354936) 1 NC_009831.1 KEGG: cps:CPS_2228 hypothetical protein; hypothetical protein 3354936 5613137 Ssed_2781 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474516.1 3354562 R 425104 CDS YP_001474517.1 157375917 5613138 complement(3355006..3355248) 1 NC_009831.1 hypothetical protein 3355248 5613138 Ssed_2782 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474517.1 3355006 R 425104 CDS YP_001474518.1 157375918 5613139 3355479..3357551 1 NC_009831.1 KEGG: ppr:PBPRB0028 hypothetical methyl-accepting chemotaxisprotein; methyl-accepting chemotaxisprotein 3357551 5613139 Ssed_2783 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxisprotein YP_001474518.1 3355479 D 425104 CDS YP_001474519.1 157375919 5612812 complement(3357680..3358990) 1 NC_009831.1 KEGG: eca:ECA0799 outer membrane protein; hypothetical protein 3358990 5612812 Ssed_2784 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474519.1 3357680 R 425104 CDS YP_001474520.1 157375920 5612813 complement(3359111..3359800) 1 NC_009831.1 KEGG: slo:Shew_2541 helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 3359800 5612813 Ssed_2785 Shewanella sediminis HAW-EB3 helix-turn-helix, type 11 domain-containing protein YP_001474520.1 3359111 R 425104 CDS YP_001474521.1 157375921 5612814 complement(3359954..3360394) 1 NC_009831.1 KEGG: shn:Shewana3_2705 transcription activator, effector binding; transcription activator, effector binding 3360394 5612814 Ssed_2786 Shewanella sediminis HAW-EB3 transcription activator, effector binding YP_001474521.1 3359954 R 425104 CDS YP_001474522.1 157375922 5612815 complement(3360453..3360836) 1 NC_009831.1 KEGG: son:SO1756 glyoxalase family protein; glyoxalase family protein 3360836 5612815 Ssed_2787 Shewanella sediminis HAW-EB3 glyoxalase family protein YP_001474522.1 3360453 R 425104 CDS YP_001474523.1 157375923 5613310 complement(3360960..3362429) 1 NC_009831.1 KEGG: mxa:MXAN_2860 hypothetical protein; hypothetical protein 3362429 5613310 Ssed_2788 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474523.1 3360960 R 425104 CDS YP_001474524.1 157375924 5613311 complement(3362558..3363223) 1 NC_009831.1 hypothetical protein 3363223 5613311 Ssed_2789 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474524.1 3362558 R 425104 CDS YP_001474525.1 157375925 5613312 3363468..3364202 1 NC_009831.1 KEGG: gur:Gura_3331 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3364202 5613312 Ssed_2790 Shewanella sediminis HAW-EB3 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001474525.1 3363468 D 425104 CDS YP_001474526.1 157375926 5613313 3364202..3366622 1 NC_009831.1 KEGG: gur:Gura_3330 hypothetical protein; hypothetical protein 3366622 5613313 Ssed_2791 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474526.1 3364202 D 425104 CDS YP_001474527.1 157375927 5613434 complement(3366625..3367230) 1 NC_009831.1 KEGG: saz:Sama_3519 acetyltransferase including N-acetylase of ribosomal protein; ribosomal protein N-acetylase-like protein 3367230 5613434 Ssed_2792 Shewanella sediminis HAW-EB3 ribosomal protein N-acetylase-like protein YP_001474527.1 3366625 R 425104 CDS YP_001474528.1 157375928 5613435 complement(3367234..3367866) 1 NC_009831.1 KEGG: slo:Shew_1536 chloramphenicol acetyltransferase; chloramphenicol acetyltransferase 3367866 5613435 Ssed_2793 Shewanella sediminis HAW-EB3 chloramphenicol acetyltransferase YP_001474528.1 3367234 R 425104 CDS YP_001474529.1 157375929 5613436 3368015..3368560 1 NC_009831.1 KEGG: vfi:VFA1053 transcriptional regulator, MerR family; MerR family transcriptional regulator 3368560 5613436 Ssed_2794 Shewanella sediminis HAW-EB3 MerR family transcriptional regulator YP_001474529.1 3368015 D 425104 CDS YP_001474530.1 157375930 5613437 complement(3368711..3369247) 1 NC_009831.1 KEGG: dde:Dde_3171 acetyltransferase; acetyltransferase 3369247 5613437 Ssed_2795 Shewanella sediminis HAW-EB3 acetyltransferase YP_001474530.1 3368711 R 425104 CDS YP_001474531.1 157375931 5613512 complement(3369703..3376164) 1 NC_009831.1 KEGG: son:SO0189 fibronectin type III domain protein; fibronectin type III domain-containing protein 3376164 5613512 Ssed_2796 Shewanella sediminis HAW-EB3 fibronectin type III domain-containing protein YP_001474531.1 3369703 R 425104 CDS YP_001474532.1 157375932 5613513 complement(3376978..3377355) 1 NC_009831.1 hypothetical protein 3377355 5613513 Ssed_2797 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474532.1 3376978 R 425104 CDS YP_001474533.1 157375933 5613514 complement(3377584..3379644) 1 NC_009831.1 KEGG: sde:Sde_2352 aspartate carbamoyltransferase; aspartate carbamoyltransferase 3379644 5613514 Ssed_2798 Shewanella sediminis HAW-EB3 aspartate carbamoyltransferase YP_001474533.1 3377584 R 425104 CDS YP_001474534.1 157375934 5611440 complement(3379680..3381884) 1 NC_009831.1 KEGG: sde:Sde_2353 nitrate reductase; nitrate reductase 3381884 5611440 Ssed_2799 Shewanella sediminis HAW-EB3 nitrate reductase YP_001474534.1 3379680 R 425104 CDS YP_001474535.1 157375935 5611441 3382164..3382751 1 NC_009831.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 3382751 5611441 Ssed_2800 Shewanella sediminis HAW-EB3 ecotin YP_001474535.1 3382164 D 425104 CDS YP_001474536.1 157375936 5611442 3383011..3383433 1 NC_009831.1 KEGG: cps:CPS_2500 lipoprotein; lipoprotein 3383433 5611442 Ssed_2801 Shewanella sediminis HAW-EB3 lipoprotein YP_001474536.1 3383011 D 425104 CDS YP_001474537.1 157375937 5611443 3383966..3385231 1 NC_009831.1 KEGG: vpa:VPA1242 cytosine permease/transport; cytosine permease 3385231 codB 5611443 codB Shewanella sediminis HAW-EB3 cytosine permease YP_001474537.1 3383966 D 425104 CDS YP_001474538.1 157375938 5613638 3385242..3386537 1 NC_009831.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 3386537 5613638 Ssed_2803 Shewanella sediminis HAW-EB3 cytosine deaminase YP_001474538.1 3385242 D 425104 CDS YP_001474539.1 157375939 5613639 complement(3386633..3388453) 1 NC_009831.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 3388453 5613639 Ssed_2804 Shewanella sediminis HAW-EB3 anaerobic ribonucleoside triphosphate reductase YP_001474539.1 3386633 R 425104 CDS YP_001474540.1 157375940 5613640 complement(3388466..3388918) 1 NC_009831.1 KEGG: cps:CPS_0093 hypothetical protein; hypothetical protein 3388918 5613640 Ssed_2805 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474540.1 3388466 R 425104 CDS YP_001474541.1 157375941 5613641 3389301..3389792 1 NC_009831.1 KEGG: slo:Shew_0903 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3389792 5613641 Ssed_2806 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001474541.1 3389301 D 425104 CDS YP_001474542.1 157375942 5613624 3389880..3390125 1 NC_009831.1 hypothetical protein 3390125 5613624 Ssed_2807 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474542.1 3389880 D 425104 CDS YP_001474543.1 157375943 5613625 complement(3390194..3390685) 1 NC_009831.1 KEGG: shn:Shewana3_1718 hypothetical protein; hypothetical protein 3390685 5613625 Ssed_2808 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474543.1 3390194 R 425104 CDS YP_001474544.1 157375944 5613626 complement(3390685..3391461) 1 NC_009831.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 3391461 5613626 Ssed_2809 Shewanella sediminis HAW-EB3 NAD-dependent deacetylase YP_001474544.1 3390685 R 425104 CDS YP_001474545.1 157375945 5613627 3392046..3392477 1 NC_009831.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 3392477 fur 5613627 fur Shewanella sediminis HAW-EB3 ferric uptake regulator YP_001474545.1 3392046 D 425104 CDS YP_001474546.1 157375946 5613668 complement(3392632..3393504) 1 NC_009831.1 KEGG: slo:Shew_1658 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 3393504 5613668 Ssed_2811 Shewanella sediminis HAW-EB3 succinyl-CoA synthetase subunit alpha YP_001474546.1 3392632 R 425104 CDS YP_001474547.1 157375947 5613669 complement(3393504..3394670) 1 NC_009831.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 3394670 sucC 5613669 sucC Shewanella sediminis HAW-EB3 succinyl-CoA synthetase subunit beta YP_001474547.1 3393504 R 425104 CDS YP_001474548.1 157375948 5613670 complement(3394784..3395971) 1 NC_009831.1 KEGG: slo:Shew_1656 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 3395971 5613670 Ssed_2813 Shewanella sediminis HAW-EB3 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001474548.1 3394784 R 425104 CDS YP_001474549.1 157375949 5613671 complement(3396001..3398823) 1 NC_009831.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 3398823 sucA 5613671 sucA Shewanella sediminis HAW-EB3 2-oxoglutarate dehydrogenase E1 YP_001474549.1 3396001 R 425104 CDS YP_001474550.1 157375950 5614001 complement(3399003..3399710) 1 NC_009831.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3399710 sdhB 5614001 sdhB Shewanella sediminis HAW-EB3 succinate dehydrogenase iron-sulfur subunit YP_001474550.1 3399003 R 425104 CDS YP_001474551.1 157375951 5614002 complement(3399721..3401487) 1 NC_009831.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3401487 sdhA 5614002 sdhA Shewanella sediminis HAW-EB3 succinate dehydrogenase flavoprotein subunit YP_001474551.1 3399721 R 425104 CDS YP_001474552.1 157375952 5614003 complement(3401488..3401835) 1 NC_009831.1 KEGG: slo:Shew_1652 conserved hypothetical succinate dehydrogenase, hydrophobic subunit; succinate dehydrogenase, hydrophobic subunit 3401835 5614003 Ssed_2817 Shewanella sediminis HAW-EB3 succinate dehydrogenase, hydrophobic subunit YP_001474552.1 3401488 R 425104 CDS YP_001474553.1 157375953 5613961 complement(3401829..3402203) 1 NC_009831.1 KEGG: slo:Shew_1651 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b subunit 3402203 5613961 Ssed_2818 Shewanella sediminis HAW-EB3 succinate dehydrogenase, cytochrome b subunit YP_001474553.1 3401829 R 425104 CDS YP_001474554.1 157375954 5613962 3402633..3403919 1 NC_009831.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 3403919 gltA 5613962 gltA Shewanella sediminis HAW-EB3 type II citrate synthase YP_001474554.1 3402633 D 425104 CDS YP_001474555.1 157375955 5613963 3404485..3405576 1 NC_009831.1 KEGG: slo:Shew_1649 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3405576 5613963 Ssed_2820 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001474555.1 3404485 D 425104 CDS YP_001474556.1 157375956 5613964 3405590..3408853 1 NC_009831.1 KEGG: slo:Shew_1648 acriflavin resistance protein; acriflavin resistance protein 3408853 5613964 Ssed_2821 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001474556.1 3405590 D 425104 CDS YP_001474557.1 157375957 5613977 3408850..3411933 1 NC_009831.1 KEGG: slo:Shew_1647 acriflavin resistance protein; acriflavin resistance protein 3411933 5613977 Ssed_2822 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001474557.1 3408850 D 425104 CDS YP_001474558.1 157375958 5613978 3412072..3412935 1 NC_009831.1 KEGG: slo:Shew_1646 beta-lactamase domain protein; beta-lactamase domain-containing protein 3412935 5613978 Ssed_2823 Shewanella sediminis HAW-EB3 beta-lactamase domain-containing protein YP_001474558.1 3412072 D 425104 CDS YP_001474559.1 157375959 5613979 complement(3413044..3413226) 1 NC_009831.1 KEGG: slo:Shew_1640 protein of unknown function DUF343; hypothetical protein 3413226 5613979 Ssed_2824 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474559.1 3413044 R 425104 CDS YP_001474560.1 157375960 5613980 complement(3413259..3414272) 1 NC_009831.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 3414272 lpxK 5613980 lpxK Shewanella sediminis HAW-EB3 tetraacyldisaccharide 4'-kinase YP_001474560.1 3413259 R 425104 CDS YP_001474561.1 157375961 5613887 complement(3414273..3416087) 1 NC_009831.1 KEGG: son:SO2802 ABC transporter, ATP-binding protein MsbA; ABC transporter, ATP-binding protein MsbA 3416087 5613887 Ssed_2826 Shewanella sediminis HAW-EB3 ABC transporter, ATP-binding protein MsbA YP_001474561.1 3414273 R 425104 CDS YP_001474562.1 157375962 5613888 complement(3416120..3418423) 1 NC_009831.1 KEGG: sbl:Sbal_1682 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2 3418423 5613888 Ssed_2827 Shewanella sediminis HAW-EB3 DNA internalization-related competence protein ComEC/Rec2 YP_001474562.1 3416120 R 425104 CDS YP_001474563.1 157375963 5613889 3418482..3418961 1 NC_009831.1 KEGG: slo:Shew_1636 hypothetical protein; hypothetical protein 3418961 5613889 Ssed_2828 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474563.1 3418482 D 425104 CDS YP_001474564.1 157375964 5613890 complement(3419126..3420385) 1 NC_009831.1 KEGG: slo:Shew_1634 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 3420385 5613890 Ssed_2829 Shewanella sediminis HAW-EB3 LolC/E family lipoprotein releasing system, transmembrane protein YP_001474564.1 3419126 R 425104 CDS YP_001474565.1 157375965 5613661 complement(3420382..3421077) 1 NC_009831.1 KEGG: sbl:Sbal_2403 lipoprotein releasing system, ATP-binding protein; lipoprotein releasing system, ATP-binding protein 3421077 5613661 Ssed_2830 Shewanella sediminis HAW-EB3 lipoprotein releasing system, ATP-binding protein YP_001474565.1 3420382 R 425104 CDS YP_001474566.1 157375966 5613662 complement(3421203..3422453) 1 NC_009831.1 KEGG: slo:Shew_1632 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 3422453 5613662 Ssed_2831 Shewanella sediminis HAW-EB3 LolC/E family lipoprotein releasing system, transmembrane protein YP_001474566.1 3421203 R 425104 CDS YP_001474567.1 157375967 5613663 3422533..3423138 1 NC_009831.1 KEGG: she:Shewmr4_1731 hypothetical protein; hypothetical protein 3423138 5613663 Ssed_2832 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474567.1 3422533 D 425104 CDS YP_001474568.1 157375968 5613537 3423275..3426748 1 NC_009831.1 KEGG: slo:Shew_1630 transcription-repair coupling factor; transcription-repair coupling factor 3426748 5613537 Ssed_2833 Shewanella sediminis HAW-EB3 transcription-repair coupling factor YP_001474568.1 3423275 D 425104 CDS YP_001474569.1 157375969 5613538 3426750..3427697 1 NC_009831.1 KEGG: slo:Shew_1629 hypothetical protein; hypothetical protein 3427697 5613538 Ssed_2834 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474569.1 3426750 D 425104 CDS YP_001474570.1 157375970 5613539 complement(3427828..3428103) 1 NC_009831.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 3428103 5613539 Ssed_2835 Shewanella sediminis HAW-EB3 acylphosphatase YP_001474570.1 3427828 R 425104 CDS YP_001474571.1 157375971 5613540 complement(3428622..3429161) 1 NC_009831.1 KEGG: slo:Shew_1627 protein of unknown function UPF0227; hypothetical protein 3429161 5613540 Ssed_2836 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474571.1 3428622 R 425104 CDS YP_001474572.1 157375972 5613179 complement(3429254..3430255) 1 NC_009831.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 3430255 5613179 Ssed_2837 Shewanella sediminis HAW-EB3 beta-hexosaminidase YP_001474572.1 3429254 R 425104 CDS YP_001474573.1 157375973 5613180 3430588..3431964 1 NC_009831.1 KEGG: slo:Shew_1625 L-serine dehydratase 1; L-serine ammonia-lyase 3431964 5613180 Ssed_2838 Shewanella sediminis HAW-EB3 L-serine ammonia-lyase YP_001474573.1 3430588 D 425104 CDS YP_001474574.1 157375974 5613181 complement(3432085..3433059) 1 NC_009831.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 3433059 cysB 5613181 cysB Shewanella sediminis HAW-EB3 transcriptional regulator CysB YP_001474574.1 3432085 R 425104 CDS YP_001474575.1 157375975 5613182 3433283..3434056 1 NC_009831.1 KEGG: son:SO2650 hypothetical protein; hypothetical protein 3434056 5613182 Ssed_2840 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474575.1 3433283 D 425104 CDS YP_001474576.1 157375976 5610453 complement(3434354..3437023) 1 NC_009831.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 3437023 5610453 Ssed_2841 Shewanella sediminis HAW-EB3 DNA topoisomerase I YP_001474576.1 3434354 R 425104 CDS YP_001474577.1 157375977 5610454 3437553..3438890 1 NC_009831.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 3438890 5610454 Ssed_2842 Shewanella sediminis HAW-EB3 succinylarginine dihydrolase YP_001474577.1 3437553 D 425104 CDS YP_001474578.1 157375978 5610455 complement(3438969..3441485) 1 NC_009831.1 KEGG: sfr:Sfri_2480 Ig domain protein, group 1 domain protein; Ig domain-containing protein 3441485 5610455 Ssed_2843 Shewanella sediminis HAW-EB3 Ig domain-containing protein YP_001474578.1 3438969 R 425104 CDS YP_001474579.1 157375979 5610456 3441702..3443012 1 NC_009831.1 KEGG: sbl:Sbal_2499 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 3443012 5610456 Ssed_2844 Shewanella sediminis HAW-EB3 sodium:dicarboxylate symporter YP_001474579.1 3441702 D 425104 CDS YP_001474580.1 157375980 5612446 complement(3443161..3444465) 1 NC_009831.1 KEGG: slo:Shew_2228 inosine kinase; inosine kinase 3444465 5612446 Ssed_2845 Shewanella sediminis HAW-EB3 inosine kinase YP_001474580.1 3443161 R 425104 CDS YP_001474581.1 157375981 5612447 complement(3444642..3445649) 1 NC_009831.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3445649 hemH 5612447 hemH Shewanella sediminis HAW-EB3 ferrochelatase YP_001474581.1 3444642 R 425104 CDS YP_001474582.1 157375982 5612448 complement(3445828..3446472) 1 NC_009831.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 3446472 adk 5612448 adk Shewanella sediminis HAW-EB3 adenylate kinase YP_001474582.1 3445828 R 425104 CDS YP_001474583.1 157375983 5612449 complement(3446671..3447516) 1 NC_009831.1 KEGG: slo:Shew_2231 thioredoxin domain protein; thioredoxin domain-containing protein 3447516 5612449 Ssed_2848 Shewanella sediminis HAW-EB3 thioredoxin domain-containing protein YP_001474583.1 3446671 R 425104 CDS YP_001474584.1 157375984 5612805 complement(3447640..3449556) 1 NC_009831.1 molecular chaperone; heat shock protein 90 3449556 5612805 Ssed_2849 Shewanella sediminis HAW-EB3 heat shock protein 90 YP_001474584.1 3447640 R 425104 CDS YP_001474585.1 157375985 5612806 complement(3449753..3450352) 1 NC_009831.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 3450352 recR 5612806 recR Shewanella sediminis HAW-EB3 recombination protein RecR YP_001474585.1 3449753 R 425104 CDS YP_001474586.1 157375986 5612807 complement(3450365..3450694) 1 NC_009831.1 KEGG: slo:Shew_2234 conserved hypothetical protein 103; hypothetical protein 3450694 5612807 Ssed_2851 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474586.1 3450365 R 425104 CDS YP_001474587.1 157375987 5612927 complement(3450779..3453646) 1 NC_009831.1 KEGG: slo:Shew_2235 DNA polymerase III, subunits gamma and tau; DNA-directed DNA polymerase 3453646 5612927 Ssed_2852 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001474587.1 3450779 R 425104 CDS YP_001474588.1 157375988 5612928 complement(3453756..3454310) 1 NC_009831.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 3454310 5612928 Ssed_2853 Shewanella sediminis HAW-EB3 adenine phosphoribosyltransferase YP_001474588.1 3453756 R 425104 CDS YP_001474589.1 157375989 5612929 complement(3454526..3454945) 1 NC_009831.1 KEGG: slo:Shew_2237 protein of unknown function DUF454; hypothetical protein 3454945 5612929 Ssed_2854 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474589.1 3454526 R 425104 CDS YP_001474590.1 157375990 5612930 complement(3455500..3455619) 1 NC_009831.1 KEGG: sfr:Sfri_2410 hypothetical protein; hypothetical protein 3455619 5612930 Ssed_2855 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474590.1 3455500 R 425104 CDS YP_001474591.1 157375991 5614171 complement(3455780..3456523) 1 NC_009831.1 KEGG: sdn:Sden_2385 hypothetical protein; hypothetical protein 3456523 5614171 Ssed_2856 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474591.1 3455780 R 425104 CDS YP_001474592.1 157375992 5614172 complement(3456523..3457359) 1 NC_009831.1 KEGG: sfr:Sfri_2412 protein of unknown function DUF692; hypothetical protein 3457359 5614172 Ssed_2857 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474592.1 3456523 R 425104 CDS YP_001474593.1 157375993 5614173 complement(3457533..3458078) 1 NC_009831.1 KEGG: slo:Shew_2241 hypothetical protein; hypothetical protein 3458078 5614173 Ssed_2858 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474593.1 3457533 R 425104 CDS YP_001474594.1 157375994 5614174 3458650..3459576 1 NC_009831.1 KEGG: slo:Shew_2242 dihydrouridine synthase, DuS; dihydrouridine synthase, DuS 3459576 5614174 Ssed_2859 Shewanella sediminis HAW-EB3 dihydrouridine synthase, DuS YP_001474594.1 3458650 D 425104 CDS YP_001474595.1 157375995 5611622 3459794..3460150 1 NC_009831.1 KEGG: slo:Shew_2243 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 3460150 5611622 Ssed_2860 Shewanella sediminis HAW-EB3 TraR/DksA family transcriptional regulator YP_001474595.1 3459794 D 425104 CDS YP_001474596.1 157375996 5611623 complement(3460303..3462924) 1 NC_009831.1 KEGG: sfr:Sfri_2416 TonB-dependent receptor; TonB-dependent receptor 3462924 5611623 Ssed_2861 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001474596.1 3460303 R 425104 CDS YP_001474597.1 157375997 5611624 complement(3463824..3464255) 1 NC_009831.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3464255 ndk 5611624 ndk Shewanella sediminis HAW-EB3 nucleoside diphosphate kinase YP_001474597.1 3463824 R 425104 CDS YP_001474598.1 157375998 5611625 complement(3464544..3464789) 1 NC_009831.1 KEGG: slo:Shew_2311 protein of unknown function DUF528; hypothetical protein 3464789 5611625 Ssed_2863 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474598.1 3464544 R 425104 CDS YP_001474599.1 157375999 5613342 complement(3464986..3466137) 1 NC_009831.1 KEGG: syn:slr2100 two-component response regulator; two-component response regulator 3466137 5613342 Ssed_2864 Shewanella sediminis HAW-EB3 two-component response regulator YP_001474599.1 3464986 R 425104 CDS YP_001474600.1 157376000 5613343 complement(3466109..3472750) 1 NC_009831.1 KEGG: mgm:Mmc1_3164 multi-sensor hybrid histidine kinase; Signal transduction histidine kinase-like protein 3472750 5613343 Ssed_2865 Shewanella sediminis HAW-EB3 Signal transduction histidine kinase-like protein YP_001474600.1 3466109 R 425104 CDS YP_001474601.1 157376001 5613344 complement(3473317..3473655) 1 NC_009831.1 KEGG: saz:Sama_1298 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S 3473655 5613344 Ssed_2866 Shewanella sediminis HAW-EB3 ferredoxin, 2Fe-2S YP_001474601.1 3473317 R 425104 CDS YP_001474602.1 157376002 5610581 complement(3473673..3475535) 1 NC_009831.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 3475535 hscA 5610581 hscA Shewanella sediminis HAW-EB3 chaperone protein HscA YP_001474602.1 3473673 R 425104 CDS YP_001474603.1 157376003 5610582 complement(3475616..3476146) 1 NC_009831.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 3476146 hscB 5610582 hscB Shewanella sediminis HAW-EB3 co-chaperone HscB YP_001474603.1 3475616 R 425104 CDS YP_001474604.1 157376004 5610583 complement(3476166..3476489) 1 NC_009831.1 KEGG: slo:Shew_2315 iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 3476489 5610583 Ssed_2869 Shewanella sediminis HAW-EB3 iron-sulfur cluster assembly protein IscA YP_001474604.1 3476166 R 425104 CDS YP_001474605.1 157376005 5610584 complement(3476504..3476887) 1 NC_009831.1 KEGG: shn:Shewana3_2279 FeS cluster assembly scaffold IscU; scaffold protein 3476887 5610584 Ssed_2870 Shewanella sediminis HAW-EB3 scaffold protein YP_001474605.1 3476504 R 425104 CDS YP_001474606.1 157376006 5611785 complement(3476924..3478138) 1 NC_009831.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 3478138 5611785 Ssed_2871 Shewanella sediminis HAW-EB3 cysteine desulfurase YP_001474606.1 3476924 R 425104 CDS YP_001474607.1 157376007 5611786 complement(3478214..3478675) 1 NC_009831.1 KEGG: slo:Shew_2318 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 3478675 5611786 Ssed_2872 Shewanella sediminis HAW-EB3 BadM/Rrf2 family transcriptional regulator YP_001474607.1 3478214 R 425104 CDS YP_001474608.1 157376008 5611787 complement(3478894..3479715) 1 NC_009831.1 KEGG: slo:Shew_2319 serine O-acetyltransferase; Serine O-acetyltransferase 3479715 5611787 Ssed_2873 Shewanella sediminis HAW-EB3 Serine O-acetyltransferase YP_001474608.1 3478894 R 425104 CDS YP_001474609.1 157376009 5611788 complement(3479730..3480494) 1 NC_009831.1 KEGG: slo:Shew_2320 RNA methyltransferase, TrmH family, group 1; RNA methyltransferase 3480494 5611788 Ssed_2874 Shewanella sediminis HAW-EB3 RNA methyltransferase YP_001474609.1 3479730 R 425104 CDS YP_001474610.1 157376010 5611329 3480844..3481647 1 NC_009831.1 KEGG: slo:Shew_2321 inositol monophosphatase; inositol-phosphate phosphatase 3481647 5611329 Ssed_2875 Shewanella sediminis HAW-EB3 inositol-phosphate phosphatase YP_001474610.1 3480844 D 425104 CDS YP_001474611.1 157376011 5611330 3481832..3483052 1 NC_009831.1 KEGG: slo:Shew_2322 NnrS family protein; NnrS family protein 3483052 5611330 Ssed_2876 Shewanella sediminis HAW-EB3 NnrS family protein YP_001474611.1 3481832 D 425104 CDS YP_001474612.1 157376012 5611331 3483351..3483755 1 NC_009831.1 KEGG: slo:Shew_2323 phosphate-starvation-inducible E; phosphate-starvation-inducible E 3483755 5611331 Ssed_2877 Shewanella sediminis HAW-EB3 phosphate-starvation-inducible E YP_001474612.1 3483351 D 425104 CDS YP_001474613.1 157376013 5611332 3483907..3484221 1 NC_009831.1 KEGG: slo:Shew_2324 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3484221 5611332 Ssed_2878 Shewanella sediminis HAW-EB3 type IV pilus assembly PilZ YP_001474613.1 3483907 D 425104 CDS YP_001474614.1 157376014 5610220 3484322..3484990 1 NC_009831.1 KEGG: slo:Shew_2325 hypothetical protein; hypothetical protein 3484990 5610220 Ssed_2879 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474614.1 3484322 D 425104 CDS YP_001474615.1 157376015 5610221 3484977..3485327 1 NC_009831.1 KEGG: slo:Shew_2326 RepA domain protein; RepA domain-containing protein 3485327 5610221 Ssed_2880 Shewanella sediminis HAW-EB3 RepA domain-containing protein YP_001474615.1 3484977 D 425104 CDS YP_001474616.1 157376016 5610222 complement(3485390..3485632) 1 NC_009831.1 KEGG: sfr:Sfri_1783 hypothetical protein; hypothetical protein 3485632 5610222 Ssed_2881 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474616.1 3485390 R 425104 CDS YP_001474617.1 157376017 5610223 3485795..3487471 1 NC_009831.1 KEGG: shn:Shewana3_2593 signal transduction histidine kinase, LytS; signal transduction histidine kinase LytS 3487471 5610223 Ssed_2882 Shewanella sediminis HAW-EB3 signal transduction histidine kinase LytS YP_001474617.1 3485795 D 425104 CDS YP_001474618.1 157376018 5613358 3487468..3488178 1 NC_009831.1 unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT 3488178 5613358 Ssed_2883 Shewanella sediminis HAW-EB3 two-component response-regulatory protein YehT YP_001474618.1 3487468 D 425104 CDS YP_001474619.1 157376019 5613359 3488432..3489868 1 NC_009831.1 KEGG: slo:Shew_2330 carbon starvation protein CstA; carbon starvation protein CstA 3489868 5613359 Ssed_2884 Shewanella sediminis HAW-EB3 carbon starvation protein CstA YP_001474619.1 3488432 D 425104 CDS YP_001474620.1 157376020 5613360 complement(3489956..3490495) 1 NC_009831.1 KEGG: slo:Shew_2331 YaeQ family protein; YaeQ family protein 3490495 5613360 Ssed_2885 Shewanella sediminis HAW-EB3 YaeQ family protein YP_001474620.1 3489956 R 425104 CDS YP_001474621.1 157376021 5613101 complement(3490599..3491510) 1 NC_009831.1 KEGG: son:SO3108 precorrin-2 oxidase / ferrochelatase; precorrin-2 oxidase/ferrochelatase 3491510 5613101 Ssed_2886 Shewanella sediminis HAW-EB3 precorrin-2 oxidase/ferrochelatase YP_001474621.1 3490599 R 425104 CDS YP_001474622.1 157376022 5613102 complement(3491588..3491947) 1 NC_009831.1 KEGG: saz:Sama_2188 rhodanese-like protein; rhodanese-like protein 3491947 5613102 Ssed_2887 Shewanella sediminis HAW-EB3 rhodanese-like protein YP_001474622.1 3491588 R 425104 CDS YP_001474623.1 157376023 5613103 complement(3492017..3492334) 1 NC_009831.1 KEGG: slo:Shew_2333 hypothetical protein; hypothetical protein 3492334 5613103 Ssed_2888 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474623.1 3492017 R 425104 CDS YP_001474624.1 157376024 5613104 complement(3492537..3493484) 1 NC_009831.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3493484 secF 5613104 secF Shewanella sediminis HAW-EB3 preprotein translocase subunit SecF YP_001474624.1 3492537 R 425104 CDS YP_001474625.1 157376025 5611242 complement(3493497..3495347) 1 NC_009831.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3495347 secD 5611242 secD Shewanella sediminis HAW-EB3 preprotein translocase subunit SecD YP_001474625.1 3493497 R 425104 CDS YP_001474626.1 157376026 5611243 complement(3495365..3495697) 1 NC_009831.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 3495697 yajC 5611243 yajC Shewanella sediminis HAW-EB3 preprotein translocase subunit YajC YP_001474626.1 3495365 R 425104 CDS YP_001474627.1 157376027 5611244 complement(3495727..3496860) 1 NC_009831.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3496860 tgt 5611244 tgt Shewanella sediminis HAW-EB3 queuine tRNA-ribosyltransferase YP_001474627.1 3495727 R 425104 CDS YP_001474628.1 157376028 5611245 complement(3497033..3498070) 1 NC_009831.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 3498070 queA 5611245 queA Shewanella sediminis HAW-EB3 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001474628.1 3497033 R 425104 CDS YP_001474629.1 157376029 5611985 complement(3498142..3498303) 1 NC_009831.1 KEGG: shn:Shewana3_1433 hypothetical protein; hypothetical protein 3498303 5611985 Ssed_2894 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474629.1 3498142 R 425104 CDS YP_001474630.1 157376030 5611986 3498464..3499057 1 NC_009831.1 KEGG: slo:Shew_2339 protein of unknown function DUF479; hypothetical protein 3499057 5611986 Ssed_2895 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474630.1 3498464 D 425104 CDS YP_001474631.1 157376031 5611987 3499151..3499807 1 NC_009831.1 KEGG: slo:Shew_1460 pseudouridine synthase; pseudouridine synthase 3499807 5611987 Ssed_2896 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001474631.1 3499151 D 425104 CDS YP_001474632.1 157376032 5611988 complement(3499926..3500327) 1 NC_009831.1 KEGG: slo:Shew_1459 hypothetical protein; hypothetical protein 3500327 5611988 Ssed_2897 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474632.1 3499926 R 425104 CDS YP_001474633.1 157376033 5613814 complement(3500864..3502102) 1 NC_009831.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 3502102 5613814 Ssed_2898 Shewanella sediminis HAW-EB3 serine/threonine transporter SstT YP_001474633.1 3500864 R 425104 CDS YP_001474634.1 157376034 5613815 complement(3502489..3503376) 1 NC_009831.1 KEGG: slo:Shew_1457 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein 3503376 5613815 Ssed_2899 Shewanella sediminis HAW-EB3 response regulator receiver modulated CheW protein YP_001474634.1 3502489 R 425104 CDS YP_001474635.1 157376035 5613816 complement(3503470..3504993) 1 NC_009831.1 KEGG: slo:Shew_1456 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 3504993 5613816 Ssed_2900 Shewanella sediminis HAW-EB3 phospholipase D/transphosphatidylase YP_001474635.1 3503470 R 425104 CDS YP_001474636.1 157376036 5613817 complement(3505145..3505615) 1 NC_009831.1 KEGG: shw:Sputw3181_1514 dual specificity protein phosphatase; dual specificity protein phosphatase 3505615 5613817 Ssed_2901 Shewanella sediminis HAW-EB3 dual specificity protein phosphatase YP_001474636.1 3505145 R 425104 CDS YP_001474637.1 157376037 5609969 complement(3505708..3507006) 1 NC_009831.1 KEGG: sfr:Sfri_2710 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3507006 5609969 Ssed_2902 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001474637.1 3505708 R 425104 CDS YP_001474638.1 157376038 5609970 complement(3507146..3507760) 1 NC_009831.1 KEGG: shw:Sputw3181_1512 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 3507760 5609970 Ssed_2903 Shewanella sediminis HAW-EB3 methylated-DNA--protein-cysteine methyltransferase YP_001474638.1 3507146 R 425104 CDS YP_001474639.1 157376039 5609971 complement(3507757..3509265) 1 NC_009831.1 KEGG: shn:Shewana3_1420 transcriptional regulator, AraC family; AraC family transcriptional regulator 3509265 5609971 Ssed_2904 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001474639.1 3507757 R 425104 CDS YP_001474640.1 157376040 5610135 3509445..3511274 1 NC_009831.1 KEGG: slo:Shew_1451 ABC transporter-related protein; ABC transporter-like protein 3511274 5610135 Ssed_2905 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001474640.1 3509445 D 425104 CDS YP_001474641.1 157376041 5610569 complement(3513868..3515277) 1 NC_009831.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3515277 gltX 5610569 gltX Shewanella sediminis HAW-EB3 glutamyl-tRNA synthetase YP_001474641.1 3513868 R 425104 CDS YP_001474642.1 157376042 5610637 3516874..3517101 1 NC_009831.1 KEGG: sbl:Sbal_2803 hypothetical protein; hypothetical protein 3517101 5610637 Ssed_2907 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474642.1 3516874 D 425104 CDS YP_001474643.1 157376043 5610138 3517496..3518530 1 NC_009831.1 KEGG: slo:Shew_1446 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 3518530 5610138 Ssed_2908 Shewanella sediminis HAW-EB3 TRAP dicarboxylate transporter subunit DctP YP_001474643.1 3517496 D 425104 CDS YP_001474644.1 157376044 5610021 3518607..3519311 1 NC_009831.1 KEGG: shn:Shewana3_1415 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter, DctQ component 3519311 5610021 Ssed_2909 Shewanella sediminis HAW-EB3 tripartite ATP-independent periplasmic transporter, DctQ component YP_001474644.1 3518607 D 425104 CDS YP_001474645.1 157376045 5610022 3519311..3520708 1 NC_009831.1 KEGG: sfr:Sfri_2717 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 3520708 5610022 Ssed_2910 Shewanella sediminis HAW-EB3 TRAP dicarboxylate transporter subunit DctM YP_001474645.1 3519311 D 425104 CDS YP_001474646.1 157376046 5610023 3520824..3522665 1 NC_009831.1 KEGG: shn:Shewana3_1413 ATP-binding region, ATPase domain protein domain protein; ATPase domain-containing protein 3522665 5610023 Ssed_2911 Shewanella sediminis HAW-EB3 ATPase domain-containing protein YP_001474646.1 3520824 D 425104 CDS YP_001474647.1 157376047 5610024 3522652..3524019 1 NC_009831.1 KEGG: slo:Shew_1442 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 3524019 5610024 Ssed_2912 Shewanella sediminis HAW-EB3 two component, sigma54 specific, Fis family transcriptional regulator YP_001474647.1 3522652 D 425104 CDS YP_001474648.1 157376048 5609936 complement(3524067..3525350) 1 NC_009831.1 KEGG: slo:Shew_1441 major facilitator superfamily MFS_1; major facilitator superfamily transporter 3525350 5609936 Ssed_2913 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001474648.1 3524067 R 425104 CDS YP_001474649.1 157376049 5609937 3525505..3526392 1 NC_009831.1 KEGG: sbl:Sbal_2815 transcriptional regulator, LysR family; LysR family transcriptional regulator 3526392 5609937 Ssed_2914 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474649.1 3525505 D 425104 CDS YP_001474650.1 157376050 5609938 complement(3526421..3529528) 1 NC_009831.1 KEGG: slo:Shew_3565 acriflavin resistance protein; acriflavin resistance protein 3529528 5609938 Ssed_2915 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001474650.1 3526421 R 425104 CDS YP_001474651.1 157376051 5609939 complement(3529525..3530874) 1 NC_009831.1 KEGG: slo:Shew_3566 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3530874 5609939 Ssed_2916 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001474651.1 3529525 R 425104 CDS YP_001474652.1 157376052 5609703 complement(3530864..3531520) 1 NC_009831.1 KEGG: slo:Shew_3567 transcriptional regulator, TetR family; TetR family transcriptional regulator 3531520 5609703 Ssed_2917 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001474652.1 3530864 R 425104 CDS YP_001474653.1 157376053 5609704 complement(3532026..3533435) 1 NC_009831.1 KEGG: pfl:PFL_2837 TPR domain protein; hypothetical protein 3533435 5609704 Ssed_2918 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474653.1 3532026 R 425104 CDS YP_001474654.1 157376054 5609705 complement(3533607..3534572) 1 NC_009831.1 KEGG: slo:Shew_0917 transcriptional regulator, LysR family; LysR family transcriptional regulator 3534572 5609705 Ssed_2919 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474654.1 3533607 R 425104 CDS YP_001474655.1 157376055 5609706 complement(3534696..3535151) 1 NC_009831.1 KEGG: sfr:Sfri_3125 hypothetical protein; hypothetical protein 3535151 5609706 Ssed_2920 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474655.1 3534696 R 425104 CDS YP_001474656.1 157376056 5610257 complement(3535170..3535826) 1 NC_009831.1 KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 3535826 5610257 Ssed_2921 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001474656.1 3535170 R 425104 CDS YP_001474657.1 157376057 5610258 complement(3535889..3536524) 1 NC_009831.1 KEGG: sfr:Sfri_3127 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3536524 5610258 Ssed_2922 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001474657.1 3535889 R 425104 CDS YP_001474658.1 157376058 5610259 complement(3536537..3538969) 1 NC_009831.1 KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; anaerobic dimethyl sulfoxide reductase subunit A 3538969 5610259 Ssed_2923 Shewanella sediminis HAW-EB3 anaerobic dimethyl sulfoxide reductase subunit A YP_001474658.1 3536537 R 425104 CDS YP_001474659.1 157376059 5613504 complement(3539007..3541025) 1 NC_009831.1 KEGG: sfr:Sfri_3129 outer membrane protein; outer membrane protein 3541025 5613504 Ssed_2924 Shewanella sediminis HAW-EB3 outer membrane protein YP_001474659.1 3539007 R 425104 CDS YP_001474660.1 157376060 5613505 complement(3541041..3541988) 1 NC_009831.1 KEGG: sfr:Sfri_3130 cytochrome c family protein; cytochrome c family protein 3541988 5613505 Ssed_2925 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001474660.1 3541041 R 425104 CDS YP_001474661.1 157376061 5613506 complement(3542980..3543645) 1 NC_009831.1 KEGG: shn:Shewana3_2777 response regulator receiver protein; response regulator receiver protein 3543645 5613506 Ssed_2926 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001474661.1 3542980 R 425104 CDS YP_001474662.1 157376062 5613507 complement(3543723..3544709) 1 NC_009831.1 KEGG: sbl:Sbal_1487 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 3544709 5613507 Ssed_2927 Shewanella sediminis HAW-EB3 fumarylacetoacetate (FAA) hydrolase YP_001474662.1 3543723 R 425104 CDS YP_001474663.1 157376063 5609860 complement(3544948..3546486) 1 NC_009831.1 KEGG: slo:Shew_1437 transcriptional regulator, TyrR; transcriptional regulator TyrR 3546486 5609860 Ssed_2928 Shewanella sediminis HAW-EB3 transcriptional regulator TyrR YP_001474663.1 3544948 R 425104 CDS YP_001474664.1 157376064 5609861 complement(3546715..3547047) 1 NC_009831.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3547047 phhB 5609861 phhB Shewanella sediminis HAW-EB3 pterin-4-alpha-carbinolamine dehydratase YP_001474664.1 3546715 R 425104 CDS YP_001474665.1 157376065 5609862 complement(3547107..3547904) 1 NC_009831.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 3547904 phhA 5609862 phhA Shewanella sediminis HAW-EB3 phenylalanine 4-monooxygenase YP_001474665.1 3547107 R 425104 CDS YP_001474666.1 157376066 5609863 3548201..3549121 1 NC_009831.1 KEGG: shw:Sputw3181_2716 UTP-glucose-1-phosphate uridylyltransferase GalU; UTP-glucose-1-phosphate uridylyltransferase 3549121 5609863 Ssed_2931 Shewanella sediminis HAW-EB3 UTP-glucose-1-phosphate uridylyltransferase YP_001474666.1 3548201 D 425104 CDS YP_001474667.1 157376067 5610902 3549121..3550134 1 NC_009831.1 KEGG: shn:Shewana3_2783 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 3550134 5610902 Ssed_2932 Shewanella sediminis HAW-EB3 UDP-glucose 4-epimerase YP_001474667.1 3549121 D 425104 CDS YP_001474668.1 157376068 5610903 3550253..3550741 1 NC_009831.1 KEGG: slo:Shew_1432 ferredoxin-type protein NapF; ferredoxin-type protein NapF 3550741 5610903 Ssed_2933 Shewanella sediminis HAW-EB3 ferredoxin-type protein NapF YP_001474668.1 3550253 D 425104 CDS YP_001474669.1 157376069 5610904 3550884..3551279 1 NC_009831.1 KEGG: slo:Shew_1431 protein of unknown function DUF583; hypothetical protein 3551279 5610904 Ssed_2934 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474669.1 3550884 D 425104 CDS YP_001474670.1 157376070 5610905 complement(3551442..3552119) 1 NC_009831.1 KEGG: sbl:Sbal_1477 hypothetical protein; hypothetical protein 3552119 5610905 Ssed_2935 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474670.1 3551442 R 425104 CDS YP_001474671.1 157376071 5610958 complement(3552166..3552921) 1 NC_009831.1 KEGG: slo:Shew_1429 protein of unknown function DUF218; hypothetical protein 3552921 5610958 Ssed_2936 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474671.1 3552166 R 425104 CDS YP_001474672.1 157376072 5610959 complement(3552960..3553850) 1 NC_009831.1 catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase 3553850 5610959 Ssed_2937 Shewanella sediminis HAW-EB3 fructokinase YP_001474672.1 3552960 R 425104 CDS YP_001474673.1 157376073 5610960 3554237..3555700 1 NC_009831.1 KEGG: slo:Shew_1426 hypothetical protein; hypothetical protein 3555700 5610960 Ssed_2938 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474673.1 3554237 D 425104 CDS YP_001474674.1 157376074 5610961 complement(3556036..3556776) 1 NC_009831.1 KEGG: sfr:Sfri_3709 PHP C-terminal domain protein; hydrolase 3556776 5610961 Ssed_2939 Shewanella sediminis HAW-EB3 hydrolase YP_001474674.1 3556036 R 425104 CDS YP_001474675.1 157376075 5610788 complement(3556848..3558350) 1 NC_009831.1 KEGG: shn:Shewana3_2016 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 3558350 5610788 Ssed_2940 Shewanella sediminis HAW-EB3 two component, sigma54 specific, Fis family transcriptional regulator YP_001474675.1 3556848 R 425104 CDS YP_001474676.1 157376076 5610789 complement(3558416..3561925) 1 NC_009831.1 KEGG: shn:Shewana3_2015 PAS/PAC sensor protein; PAS/PAC sensor protein 3561925 5610789 Ssed_2941 Shewanella sediminis HAW-EB3 PAS/PAC sensor protein YP_001474676.1 3558416 R 425104 CDS YP_001474677.1 157376077 5610790 complement(3561925..3562845) 1 NC_009831.1 KEGG: shn:Shewana3_2014 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 3562845 5610790 Ssed_2942 Shewanella sediminis HAW-EB3 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001474677.1 3561925 R 425104 CDS YP_001474678.1 157376078 5610681 3563255..3564667 1 NC_009831.1 KEGG: shn:Shewana3_2013 response regulator receiver modulated serine phosphatase; response regulator receiver modulated serine phosphatase 3564667 5610681 Ssed_2943 Shewanella sediminis HAW-EB3 response regulator receiver modulated serine phosphatase YP_001474678.1 3563255 D 425104 CDS YP_001474679.1 157376079 5610682 3564712..3565104 1 NC_009831.1 KEGG: shn:Shewana3_2012 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor, serine/threonine protein kinase 3565104 5610682 Ssed_2944 Shewanella sediminis HAW-EB3 anti-sigma regulatory factor, serine/threonine protein kinase YP_001474679.1 3564712 D 425104 CDS YP_001474680.1 157376080 5610683 3566021..3566362 1 NC_009831.1 KEGG: shn:Shewana3_2011 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3566362 5610683 Ssed_2945 Shewanella sediminis HAW-EB3 anti-sigma-factor antagonist YP_001474680.1 3566021 D 425104 CDS YP_001474681.1 157376081 5610684 3566488..3567807 1 NC_009831.1 KEGG: shn:Shewana3_2010 polysaccharide export protein; polysaccharide export protein 3567807 5610684 Ssed_2946 Shewanella sediminis HAW-EB3 polysaccharide export protein YP_001474681.1 3566488 D 425104 CDS YP_001474682.1 157376082 5610670 3567842..3569251 1 NC_009831.1 KEGG: shn:Shewana3_2009 hypothetical protein; hypothetical protein 3569251 5610670 Ssed_2947 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474682.1 3567842 D 425104 CDS YP_001474683.1 157376083 5610671 3569698..3570945 1 NC_009831.1 KEGG: shn:Shewana3_2008 hypothetical protein; hypothetical protein 3570945 5610671 Ssed_2948 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474683.1 3569698 D 425104 CDS YP_001474684.1 157376084 5610672 3571540..3572907 1 NC_009831.1 KEGG: shn:Shewana3_2007 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3572907 5610672 Ssed_2949 Shewanella sediminis HAW-EB3 polysaccharide biosynthesis protein YP_001474684.1 3571540 D 425104 CDS YP_001474685.1 157376085 5610673 3572897..3573940 1 NC_009831.1 KEGG: shn:Shewana3_2006 glycosyl transferase, family 2; glycosyl transferase family protein 3573940 5610673 Ssed_2950 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001474685.1 3572897 D 425104 CDS YP_001474686.1 157376086 5610685 3574488..3576638 1 NC_009831.1 KEGG: shn:Shewana3_2005 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 3576638 5610685 Ssed_2951 Shewanella sediminis HAW-EB3 WecB/TagA/CpsF family glycosyl transferase YP_001474686.1 3574488 D 425104 CDS YP_001474687.1 157376087 5610686 3576695..3578212 1 NC_009831.1 KEGG: shn:Shewana3_2004 nucleotidyl transferase; nucleotidyl transferase 3578212 5610686 Ssed_2952 Shewanella sediminis HAW-EB3 nucleotidyl transferase YP_001474687.1 3576695 D 425104 CDS YP_001474688.1 157376088 5610687 3578303..3578698 1 NC_009831.1 KEGG: shn:Shewana3_2003 glycerol-3-phosphate cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase 3578698 5610687 Ssed_2953 Shewanella sediminis HAW-EB3 glycerol-3-phosphate cytidylyltransferase YP_001474688.1 3578303 D 425104 CDS YP_001474689.1 157376089 5610688 3578713..3580023 1 NC_009831.1 KEGG: sbl:Sbal_2320 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; poly(glycerophosphate) glycerophosphotransferase 3580023 5610688 Ssed_2954 Shewanella sediminis HAW-EB3 poly(glycerophosphate) glycerophosphotransferase YP_001474689.1 3578713 D 425104 CDS YP_001474690.1 157376090 5610654 complement(3579994..3580920) 1 NC_009831.1 KEGG: sbl:Sbal_2866 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3580920 5610654 Ssed_2955 Shewanella sediminis HAW-EB3 glucose-1-phosphate thymidylyltransferase YP_001474690.1 3579994 R 425104 CDS YP_001474691.1 157376091 5610655 complement(3581095..3582060) 1 NC_009831.1 KEGG: vfi:VF0200 acetyltransferase; acetyltransferase 3582060 5610655 Ssed_2956 Shewanella sediminis HAW-EB3 acetyltransferase YP_001474691.1 3581095 R 425104 CDS YP_001474692.1 157376092 5610656 complement(3582264..3582950) 1 NC_009831.1 KEGG: pin:Ping_0800 adenylyl-sulfate kinase; adenylylsulfate kinase 3582950 5610656 Ssed_2957 Shewanella sediminis HAW-EB3 adenylylsulfate kinase YP_001474692.1 3582264 R 425104 CDS YP_001474693.1 157376093 5610657 complement(3583014..3583367) 1 NC_009831.1 KEGG: vfi:VF0163 hypothetical protein; hypothetical protein 3583367 5610657 Ssed_2958 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474693.1 3583014 R 425104 CDS YP_001474694.1 157376094 5610623 complement(3583856..3585583) 1 NC_009831.1 KEGG: slo:Shew_1424 TrkA-C domain protein; TrkA domain-containing protein 3585583 5610623 Ssed_2959 Shewanella sediminis HAW-EB3 TrkA domain-containing protein YP_001474694.1 3583856 R 425104 CDS YP_001474695.1 157376095 5610624 complement(3585845..3587266) 1 NC_009831.1 KEGG: slo:Shew_1423 sulfate adenylyltransferase, large subunit; sulfate adenylyltransferase 3587266 5610624 Ssed_2960 Shewanella sediminis HAW-EB3 sulfate adenylyltransferase YP_001474695.1 3585845 R 425104 CDS YP_001474696.1 157376096 5610625 complement(3587486..3588391) 1 NC_009831.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3588391 5610625 Ssed_2961 Shewanella sediminis HAW-EB3 sulfate adenylyltransferase subunit 2 YP_001474696.1 3587486 R 425104 CDS YP_001474697.1 157376097 5610619 3588993..3590573 1 NC_009831.1 KEGG: sfr:Sfri_2820 beta-lactamase domain protein; beta-lactamase domain-containing protein 3590573 5610619 Ssed_2962 Shewanella sediminis HAW-EB3 beta-lactamase domain-containing protein YP_001474697.1 3588993 D 425104 CDS YP_001474698.1 157376098 5610620 3591027..3592226 1 NC_009831.1 hypothetical protein 3592226 5610620 Ssed_2963 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474698.1 3591027 D 425104 CDS YP_001474699.1 157376099 5610621 complement(3592353..3593267) 1 NC_009831.1 KEGG: msu:MS1496 RfaG protein; hypothetical protein 3593267 5610621 Ssed_2964 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474699.1 3592353 R 425104 CDS YP_001474700.1 157376100 5610622 complement(3593301..3593987) 1 NC_009831.1 KEGG: pgi:PG0119 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 3593987 5610622 Ssed_2965 Shewanella sediminis HAW-EB3 WecB/TagA/CpsF family glycosyl transferase YP_001474700.1 3593301 R 425104 CDS YP_001474701.1 157376101 5613743 complement(3594084..3595223) 1 NC_009831.1 KEGG: eca:ECA4208 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 3595223 5613743 Ssed_2966 Shewanella sediminis HAW-EB3 UDP-N-acetylglucosamine 2-epimerase YP_001474701.1 3594084 R 425104 CDS YP_001474702.1 157376102 5613744 complement(3595649..3596749) 1 NC_009831.1 KEGG: tdn:Tmden_1418 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 3596749 5613744 Ssed_2967 Shewanella sediminis HAW-EB3 UDP-N-acetylglucosamine 2-epimerase YP_001474702.1 3595649 R 425104 CDS YP_001474703.1 157376103 5613745 complement(3596838..3597374) 1 NC_009831.1 KEGG: acb:A1S_0057 capsular polysaccharide synthesis enzyme; acetyltransferase 3597374 5613745 Ssed_2968 Shewanella sediminis HAW-EB3 acetyltransferase YP_001474703.1 3596838 R 425104 CDS YP_001474704.1 157376104 5613746 complement(3597371..3598720) 1 NC_009831.1 KEGG: mxa:MXAN_3260 hypothetical protein; O-antigen and teichoic acid-like export protein 3598720 5613746 Ssed_2969 Shewanella sediminis HAW-EB3 O-antigen and teichoic acid-like export protein YP_001474704.1 3597371 R 425104 CDS YP_001474705.1 157376105 5610546 complement(3598720..3599820) 1 NC_009831.1 KEGG: saz:Sama_2257 DegT/DnrJ/EryC1/StrS family protein; DegT/DnrJ/EryC1/StrS family protein 3599820 5610546 Ssed_2970 Shewanella sediminis HAW-EB3 DegT/DnrJ/EryC1/StrS family protein YP_001474705.1 3598720 R 425104 CDS YP_001474706.1 157376106 5610547 complement(3599826..3600404) 1 NC_009831.1 KEGG: saz:Sama_2258 acetyltransferase; acetyltransferase 3600404 5610547 Ssed_2971 Shewanella sediminis HAW-EB3 acetyltransferase YP_001474706.1 3599826 R 425104 CDS YP_001474707.1 157376107 5610548 complement(3600475..3601419) 1 NC_009831.1 KEGG: msu:MS1500 MviM protein; MviM protein 3601419 5610548 Ssed_2972 Shewanella sediminis HAW-EB3 MviM protein YP_001474707.1 3600475 R 425104 CDS YP_001474708.1 157376108 5610549 complement(3601422..3602693) 1 NC_009831.1 KEGG: saz:Sama_2260 UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase 3602693 5610549 Ssed_2973 Shewanella sediminis HAW-EB3 UDP-glucose/GDP-mannose dehydrogenase YP_001474708.1 3601422 R 425104 CDS YP_001474709.1 157376109 5613547 complement(3602758..3604059) 1 NC_009831.1 KEGG: bca:BCE_0978 hypothetical protein; hypothetical protein 3604059 5613547 Ssed_2974 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474709.1 3602758 R 425104 CDS YP_001474710.1 157376110 5613548 complement(3604078..3605031) 1 NC_009831.1 KEGG: cps:CPS_2090 chain length determinant family protein; chain length determinant family protein 3605031 5613548 Ssed_2975 Shewanella sediminis HAW-EB3 chain length determinant family protein YP_001474710.1 3604078 R 425104 CDS YP_001474711.1 157376111 5613549 complement(3605078..3605530) 1 NC_009831.1 KEGG: pfa:MAL8P1.133 hypothetical protein, conserved; hypothetical protein 3605530 5613549 Ssed_2976 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474711.1 3605078 R 425104 CDS YP_001474712.1 157376112 5613550 complement(3605527..3606009) 1 NC_009831.1 KEGG: dre:450072 zgc:101623; hypothetical protein 3606009 5613550 Ssed_2977 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474712.1 3605527 R 425104 CDS YP_001474713.1 157376113 5610554 complement(3606158..3607231) 1 NC_009831.1 KEGG: nmu:Nmul_A0253 glycosyl transferase, group 1; glycosyltransferase-like protein 3607231 5610554 Ssed_2978 Shewanella sediminis HAW-EB3 glycosyltransferase-like protein YP_001474713.1 3606158 R 425104 CDS YP_001474714.1 157376114 5610555 complement(3607221..3608747) 1 NC_009831.1 KEGG: hch:HCH_03412 hypothetical protein; hypothetical protein 3608747 5610555 Ssed_2979 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474714.1 3607221 R 425104 CDS YP_001474715.1 157376115 5610556 complement(3608807..3609760) 1 NC_009831.1 KEGG: hch:HCH_05271 glycosyltransferase involved in cell wall biogenesis; cell wall biosynthesis glycosyltransferase-like protein 3609760 5610556 Ssed_2980 Shewanella sediminis HAW-EB3 cell wall biosynthesis glycosyltransferase-like protein YP_001474715.1 3608807 R 425104 CDS YP_001474716.1 157376116 5610536 complement(3609753..3610916) 1 NC_009831.1 KEGG: det:DET0213 hypothetical protein; hypothetical protein 3610916 5610536 Ssed_2981 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474716.1 3609753 R 425104 CDS YP_001474717.1 157376117 5610537 complement(3610920..3612011) 1 NC_009831.1 KEGG: mpt:Mpe_A0731 nitroreductase-like protein; nitroreductase-like protein 3612011 5610537 Ssed_2982 Shewanella sediminis HAW-EB3 nitroreductase-like protein YP_001474717.1 3610920 R 425104 CDS YP_001474718.1 157376118 5610538 complement(3612206..3613489) 1 NC_009831.1 KEGG: ava:Ava_1044 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3613489 5610538 Ssed_2983 Shewanella sediminis HAW-EB3 polysaccharide biosynthesis protein YP_001474718.1 3612206 R 425104 CDS YP_001474719.1 157376119 5610539 complement(3613868..3614833) 1 NC_009831.1 KEGG: vfi:VF0200 acetyltransferase; acetyltransferase 3614833 5610539 Ssed_2984 Shewanella sediminis HAW-EB3 acetyltransferase YP_001474719.1 3613868 R 425104 CDS YP_001474720.1 157376120 5610525 complement(3615084..3615755) 1 NC_009831.1 KEGG: slo:Shew_1425 adenylyl-sulfate kinase; adenylylsulfate kinase 3615755 5610525 Ssed_2985 Shewanella sediminis HAW-EB3 adenylylsulfate kinase YP_001474720.1 3615084 R 425104 CDS YP_001474721.1 157376121 5610526 complement(3615825..3617552) 1 NC_009831.1 KEGG: slo:Shew_1424 TrkA-C domain protein; TrkA domain-containing protein 3617552 5610526 Ssed_2986 Shewanella sediminis HAW-EB3 TrkA domain-containing protein YP_001474721.1 3615825 R 425104 CDS YP_001474722.1 157376122 5610527 complement(3617649..3619058) 1 NC_009831.1 KEGG: slo:Shew_1423 sulfate adenylyltransferase, large subunit; sulfate adenylyltransferase 3619058 5610527 Ssed_2987 Shewanella sediminis HAW-EB3 sulfate adenylyltransferase YP_001474722.1 3617649 R 425104 CDS YP_001474723.1 157376123 5610528 complement(3619283..3620188) 1 NC_009831.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3620188 5610528 Ssed_2988 Shewanella sediminis HAW-EB3 sulfate adenylyltransferase subunit 2 YP_001474723.1 3619283 R 425104 CDS YP_001474724.1 157376124 5610501 complement(3621109..3621258) 1 NC_009831.1 KEGG: lpp:lpp0207 hypothetical protein; hypothetical protein 3621258 5610501 Ssed_2989 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474724.1 3621109 R 425104 CDS YP_001474725.1 157376125 5610502 complement(3621605..3622663) 1 NC_009831.1 KEGG: vfi:VF0166 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 3622663 5610502 Ssed_2990 Shewanella sediminis HAW-EB3 dTDP-glucose 4,6-dehydratase YP_001474725.1 3621605 R 425104 CDS YP_001474726.1 157376126 5610503 complement(3622847..3623749) 1 NC_009831.1 KEGG: art:Arth_2683 glycosyl transferase, family 2; glycosyl transferase family protein 3623749 5610503 Ssed_2991 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001474726.1 3622847 R 425104 CDS YP_001474727.1 157376127 5610504 complement(3623739..3624737) 1 NC_009831.1 KEGG: spd:SPD_0321 glycosyl transferase, group 2 family protein; glycosyltransferase-like protein 3624737 5610504 Ssed_2992 Shewanella sediminis HAW-EB3 glycosyltransferase-like protein YP_001474727.1 3623739 R 425104 CDS YP_001474728.1 157376128 5610490 complement(3625133..3625306) 1 NC_009831.1 KEGG: ppr:PBPRB1964 transposase; transposase 3625306 5610490 Ssed_2993 Shewanella sediminis HAW-EB3 transposase YP_001474728.1 3625133 R 425104 CDS YP_001474729.1 157376129 5610492 complement(3626188..3626886) 1 NC_009831.1 KEGG: psb:Psyr_1578 hypothetical protein; hypothetical protein 3626886 5610492 Ssed_2997 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474729.1 3626188 R 425104 CDS YP_001474730.1 157376130 5610493 complement(3626895..3628079) 1 NC_009831.1 KEGG: rme:Rmet_5241 protein of unknown function DUF201; hypothetical protein 3628079 5610493 Ssed_2998 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474730.1 3626895 R 425104 CDS YP_001474731.1 157376131 5613164 complement(3628079..3628921) 1 NC_009831.1 hypothetical protein 3628921 5613164 Ssed_2999 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474731.1 3628079 R 425104 CDS YP_001474732.1 157376132 5613165 complement(3629003..3629995) 1 NC_009831.1 KEGG: ctc:CTC01708 NDP-sugar dehydratase or epimerase; NDP-sugar dehydratase or epimerase 3629995 5613165 Ssed_3000 Shewanella sediminis HAW-EB3 NDP-sugar dehydratase or epimerase YP_001474732.1 3629003 R 425104 CDS YP_001474733.1 157376133 5613166 complement(3630106..3631671) 1 NC_009831.1 KEGG: ter:Tery_3136 capsular polysaccharide biosynthesis protein-like; hypothetical protein 3631671 5613166 Ssed_3001 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474733.1 3630106 R 425104 CDS YP_001474734.1 157376134 5610403 complement(3631668..3632813) 1 NC_009831.1 KEGG: ter:Tery_1499 TPR repeat; hypothetical protein 3632813 5610403 Ssed_3002 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474734.1 3631668 R 425104 CDS YP_001474735.1 157376135 5610404 complement(3632848..3633984) 1 NC_009831.1 apparently involved in regulation of cell wall biogenesis-like protein; KEGG: rsq:Rsph17025_3841 hypothetical protein; pyridoxal phosphate-dependent enzyme 3633984 5610404 Ssed_3003 Shewanella sediminis HAW-EB3 pyridoxal phosphate-dependent enzyme YP_001474735.1 3632848 R 425104 CDS YP_001474736.1 157376136 5610405 complement(3635322..3636518) 1 NC_009831.1 KEGG: ter:Tery_4433 hypothetical protein; hypothetical protein 3636518 5610405 Ssed_3004 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474736.1 3635322 R 425104 CDS YP_001474737.1 157376137 5610406 complement(3636931..3637755) 1 NC_009831.1 KEGG: maq:Maqu_2626 hypothetical protein; hypothetical protein 3637755 5610406 Ssed_3005 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474737.1 3636931 R 425104 CDS YP_001474738.1 157376138 5613028 complement(3637823..3638818) 1 NC_009831.1 KEGG: rpb:RPB_1995 hypothetical protein; hypothetical protein 3638818 5613028 Ssed_3006 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474738.1 3637823 R 425104 CDS YP_001474739.1 157376139 5613029 complement(3638917..3640188) 1 NC_009831.1 hypothetical protein 3640188 5613029 Ssed_3007 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474739.1 3638917 R 425104 CDS YP_001474740.1 157376140 5613030 complement(3640188..3640970) 1 NC_009831.1 KEGG: cje:Cj1432c sugar transferase; HAD superfamily hydrolase-like protein 3640970 5613030 Ssed_3008 Shewanella sediminis HAW-EB3 HAD superfamily hydrolase-like protein YP_001474740.1 3640188 R 425104 CDS YP_001474741.1 157376141 5613031 complement(3640987..3641877) 1 NC_009831.1 KEGG: art:Arth_1239 glycosyl transferase, family 2; glycosyl transferase family protein 3641877 5613031 Ssed_3009 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001474741.1 3640987 R 425104 CDS YP_001474742.1 157376142 5611464 complement(3642191..3642604) 1 NC_009831.1 KEGG: vco:VC0395_A2635 rfbqrso22-4; rfbqrso22-4-like protein 3642604 5611464 Ssed_3010 Shewanella sediminis HAW-EB3 rfbqrso22-4-like protein YP_001474742.1 3642191 R 425104 CDS YP_001474743.1 157376143 5611465 complement(3642790..3643701) 1 NC_009831.1 KEGG: pat:Patl_2129 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 3643701 5611465 Ssed_3011 Shewanella sediminis HAW-EB3 dTDP-4-dehydrorhamnose reductase YP_001474743.1 3642790 R 425104 CDS YP_001474744.1 157376144 5611466 complement(3643747..3644292) 1 NC_009831.1 KEGG: nmc:NMC0065 dTDP-D-glucose 4,6-dehydratase; dTDP-4-dehydrorhamnose 3,5-epimerase 3644292 5611466 Ssed_3012 Shewanella sediminis HAW-EB3 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001474744.1 3643747 R 425104 CDS YP_001474745.1 157376145 5611467 complement(3644322..3645212) 1 NC_009831.1 KEGG: asa:ASA_1424 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3645212 5611467 Ssed_3013 Shewanella sediminis HAW-EB3 glucose-1-phosphate thymidylyltransferase YP_001474745.1 3644322 R 425104 CDS YP_001474746.1 157376146 5610643 complement(3645209..3645925) 1 NC_009831.1 KEGG: maq:Maqu_2633 ABC transporter related; ABC transporter 3645925 5610643 Ssed_3014 Shewanella sediminis HAW-EB3 ABC transporter YP_001474746.1 3645209 R 425104 CDS YP_001474747.1 157376147 5610644 complement(3645922..3646695) 1 NC_009831.1 KEGG: maq:Maqu_2634 ABC-2 type transporter; ABC-type polysaccharide/polyol phosphate export systems permease component-like protein 3646695 5610644 Ssed_3015 Shewanella sediminis HAW-EB3 ABC-type polysaccharide/polyol phosphate export systems permease component-like protein YP_001474747.1 3645922 R 425104 CDS YP_001474748.1 157376148 5610645 complement(3646705..3647073) 1 NC_009831.1 KEGG: noc:Noc_0753 hypothetical protein; hypothetical protein 3647073 5610645 Ssed_3016 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474748.1 3646705 R 425104 CDS YP_001474749.1 157376149 5610646 complement(3647080..3647787) 1 NC_009831.1 KEGG: noc:Noc_0752 glycosyl transferase, family 2; glycosyl transferase family protein 3647787 5610646 Ssed_3017 Shewanella sediminis HAW-EB3 glycosyl transferase family protein YP_001474749.1 3647080 R 425104 CDS YP_001474750.1 157376150 5613869 complement(3648042..3649664) 1 NC_009831.1 KEGG: sfu:Sfum_2298 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3649664 5613869 Ssed_3018 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474750.1 3648042 R 425104 CDS YP_001474751.1 157376151 5613870 complement(3649793..3651136) 1 NC_009831.1 KEGG: pin:Ping_0044 hypothetical protein; hypothetical protein 3651136 5613870 Ssed_3019 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474751.1 3649793 R 425104 CDS YP_001474752.1 157376152 5613871 complement(3651949..3654039) 1 NC_009831.1 KEGG: pat:Patl_3236 type II and III secretion system protein; Type II secretory pathway component PulD-like protein 3654039 5613871 Ssed_3020 Shewanella sediminis HAW-EB3 Type II secretory pathway component PulD-like protein YP_001474752.1 3651949 R 425104 CDS YP_001474753.1 157376153 5613700 complement(3654140..3654661) 1 NC_009831.1 hypothetical protein 3654661 5613700 Ssed_3021 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474753.1 3654140 R 425104 CDS YP_001474754.1 157376154 5613701 complement(3654648..3655199) 1 NC_009831.1 hypothetical protein 3655199 5613701 Ssed_3022 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474754.1 3654648 R 425104 CDS YP_001474755.1 157376155 5613702 complement(3655192..3656169) 1 NC_009831.1 hypothetical protein 3656169 5613702 Ssed_3023 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474755.1 3655192 R 425104 CDS YP_001474756.1 157376156 5613703 complement(3656339..3657232) 1 NC_009831.1 KEGG: sat:SYN_00453 general secretion pathway protein K; Type II secretory pathway component PulK-like protein 3657232 5613703 Ssed_3024 Shewanella sediminis HAW-EB3 Type II secretory pathway component PulK-like protein YP_001474756.1 3656339 R 425104 CDS YP_001474757.1 157376157 5613610 complement(3657232..3657906) 1 NC_009831.1 hypothetical protein 3657906 5613610 Ssed_3025 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474757.1 3657232 R 425104 CDS YP_001474758.1 157376158 5613611 complement(3657903..3658340) 1 NC_009831.1 hypothetical protein 3658340 5613611 Ssed_3026 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474758.1 3657903 R 425104 CDS YP_001474759.1 157376159 5613612 complement(3658315..3658770) 1 NC_009831.1 hypothetical protein 3658770 5613612 Ssed_3027 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474759.1 3658315 R 425104 CDS YP_001474760.1 157376160 5613613 complement(3658742..3659953) 1 NC_009831.1 KEGG: dge:Dgeo_0757 type II secretion system protein; type II secretion system protein 3659953 5613613 Ssed_3028 Shewanella sediminis HAW-EB3 type II secretion system protein YP_001474760.1 3658742 R 425104 CDS YP_001474761.1 157376161 5613322 complement(3659953..3661605) 1 NC_009831.1 KEGG: sat:SYN_00458 general secretion pathway protein E; general secretion pathway protein E 3661605 5613322 Ssed_3029 Shewanella sediminis HAW-EB3 general secretion pathway protein E YP_001474761.1 3659953 R 425104 CDS YP_001474762.1 157376162 5613323 complement(3661605..3662024) 1 NC_009831.1 KEGG: mfa:Mfla_2421 general secretion pathway protein G; general secretion pathway protein G 3662024 5613323 Ssed_3030 Shewanella sediminis HAW-EB3 general secretion pathway protein G YP_001474762.1 3661605 R 425104 CDS YP_001474763.1 157376163 5613324 complement(3662071..3663123) 1 NC_009831.1 KEGG: shm:Shewmr7_1397 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3663123 5613324 Ssed_3031 Shewanella sediminis HAW-EB3 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_001474763.1 3662071 R 425104 CDS YP_001474764.1 157376164 5613325 complement(3663288..3666056) 1 NC_009831.1 KEGG: slo:Shew_1399 polysaccharide export protein; polysaccharide export protein 3666056 5613325 Ssed_3032 Shewanella sediminis HAW-EB3 polysaccharide export protein YP_001474764.1 3663288 R 425104 CDS YP_001474765.1 157376165 5613365 complement(3666371..3666910) 1 NC_009831.1 KEGG: slo:Shew_1398 NusG antitermination factor; NusG antitermination factor 3666910 5613365 Ssed_3033 Shewanella sediminis HAW-EB3 NusG antitermination factor YP_001474765.1 3666371 R 425104 CDS YP_001474766.1 157376166 5613366 3667387..3668862 1 NC_009831.1 KEGG: shn:Shewana3_1373 amino acid/peptide transporter; alkaline phosphatase 3668862 5613366 Ssed_3034 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001474766.1 3667387 D 425104 CDS YP_001474767.1 157376167 5613367 complement(3669088..3669417) 1 NC_009831.1 KEGG: saz:Sama_2263 S23 ribosomal; S23 ribosomal protein 3669417 5613367 Ssed_3035 Shewanella sediminis HAW-EB3 S23 ribosomal protein YP_001474767.1 3669088 R 425104 CDS YP_001474768.1 157376168 5613368 complement(3669839..3670942) 1 NC_009831.1 KEGG: slo:Shew_1396 response regulator receiver protein; response regulator receiver protein 3670942 5613368 Ssed_3036 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001474768.1 3669839 R 425104 CDS YP_001474769.1 157376169 5612980 complement(3671284..3672249) 1 NC_009831.1 KEGG: slo:Shew_1395 VacJ family lipoprotein; surface lipoprotein-like protein 3672249 5612980 Ssed_3037 Shewanella sediminis HAW-EB3 surface lipoprotein-like protein YP_001474769.1 3671284 R 425104 CDS YP_001474770.1 157376170 5612981 3672604..3674946 1 NC_009831.1 KEGG: shw:Sputw3181_1455 hypothetical protein; hypothetical protein 3674946 5612981 Ssed_3038 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474770.1 3672604 D 425104 CDS YP_001474771.1 157376171 5612982 3675306..3675641 1 NC_009831.1 KEGG: she:Shewmr4_1309 FlhB domain protein; FlhB domain-containing protein 3675641 5612982 Ssed_3039 Shewanella sediminis HAW-EB3 FlhB domain-containing protein YP_001474771.1 3675306 D 425104 CDS YP_001474772.1 157376172 5612593 complement(3676527..3676931) 1 NC_009831.1 KEGG: slo:Shew_1392 hypothetical protein; hypothetical protein 3676931 5612593 Ssed_3040 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474772.1 3676527 R 425104 CDS YP_001474773.1 157376173 5612594 complement(3677384..3677875) 1 NC_009831.1 KEGG: slo:Shew_1391 CheW protein; chemotaxis protein CheW 3677875 5612594 Ssed_3041 Shewanella sediminis HAW-EB3 chemotaxis protein CheW YP_001474773.1 3677384 R 425104 CDS YP_001474774.1 157376174 5612595 complement(3677883..3679016) 1 NC_009831.1 KEGG: slo:Shew_1390 CheW protein; chemotaxis protein CheW 3679016 5612595 Ssed_3042 Shewanella sediminis HAW-EB3 chemotaxis protein CheW YP_001474774.1 3677883 R 425104 CDS YP_001474775.1 157376175 5612596 complement(3679000..3679791) 1 NC_009831.1 KEGG: slo:Shew_1389 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 3679791 5612596 Ssed_3043 Shewanella sediminis HAW-EB3 cobyrinic acid a,c-diamide synthase YP_001474775.1 3679000 R 425104 CDS YP_001474776.1 157376176 5612841 complement(3679828..3680481) 1 NC_009831.1 KEGG: slo:Shew_1388 hypothetical protein; hypothetical protein 3680481 5612841 Ssed_3044 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474776.1 3679828 R 425104 CDS YP_001474777.1 157376177 5612842 complement(3680474..3681589) 1 NC_009831.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 3681589 5612842 Ssed_3045 Shewanella sediminis HAW-EB3 chemotaxis-specific methylesterase YP_001474777.1 3680474 R 425104 CDS YP_001474778.1 157376178 5612843 complement(3681615..3683816) 1 NC_009831.1 KEGG: slo:Shew_1386 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 3683816 5612843 Ssed_3046 Shewanella sediminis HAW-EB3 CheA signal transduction histidine kinase YP_001474778.1 3681615 R 425104 CDS YP_001474779.1 157376179 5612844 complement(3683832..3684569) 1 NC_009831.1 KEGG: slo:Shew_1385 chemotaxis phosphatase, CheZ; chemotaxis protein CheZ 3684569 5612844 Ssed_3047 Shewanella sediminis HAW-EB3 chemotaxis protein CheZ YP_001474779.1 3683832 R 425104 CDS YP_001474780.1 157376180 5612526 complement(3684583..3684966) 1 NC_009831.1 KEGG: slo:Shew_1384 response regulator receiver protein; response regulator receiver protein 3684966 5612526 Ssed_3048 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001474780.1 3684583 R 425104 CDS YP_001474781.1 157376181 5612527 complement(3685040..3685759) 1 NC_009831.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 3685759 fliA 5612527 fliA Shewanella sediminis HAW-EB3 flagellar biosynthesis sigma factor YP_001474781.1 3685040 R 425104 CDS YP_001474782.1 157376182 5612528 complement(3685752..3686633) 1 NC_009831.1 KEGG: slo:Shew_1382 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 3686633 5612528 Ssed_3050 Shewanella sediminis HAW-EB3 cobyrinic acid a,c-diamide synthase YP_001474782.1 3685752 R 425104 CDS YP_001474783.1 157376183 5612529 complement(3686638..3688032) 1 NC_009831.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 3688032 flhF 5612529 flhF Shewanella sediminis HAW-EB3 flagellar biosynthesis regulator FlhF YP_001474783.1 3686638 R 425104 CDS YP_001474784.1 157376184 5612331 complement(3688044..3690146) 1 NC_009831.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3690146 flhA 5612331 flhA Shewanella sediminis HAW-EB3 flagellar biosynthesis protein FlhA YP_001474784.1 3688044 R 425104 CDS YP_001474785.1 157376185 5612332 complement(3690448..3691581) 1 NC_009831.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3691581 flhB 5612332 flhB Shewanella sediminis HAW-EB3 flagellar biosynthesis protein FlhB YP_001474785.1 3690448 R 425104 CDS YP_001474786.1 157376186 5612333 complement(3691614..3692411) 1 NC_009831.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 3692411 fliR 5612333 fliR Shewanella sediminis HAW-EB3 flagellar biosynthesis protein FliR YP_001474786.1 3691614 R 425104 CDS YP_001474787.1 157376187 5612334 complement(3692464..3692733) 1 NC_009831.1 KEGG: slo:Shew_1377 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 3692733 5612334 Ssed_3055 Shewanella sediminis HAW-EB3 flagellar biosynthetic protein FliQ YP_001474787.1 3692464 R 425104 CDS YP_001474788.1 157376188 5612043 complement(3692742..3693488) 1 NC_009831.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3693488 fliP 5612043 fliP Shewanella sediminis HAW-EB3 flagellar biosynthesis protein FliP YP_001474788.1 3692742 R 425104 CDS YP_001474789.1 157376189 5612044 complement(3693485..3693862) 1 NC_009831.1 KEGG: slo:Shew_1375 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein, FliO 3693862 5612044 Ssed_3057 Shewanella sediminis HAW-EB3 flagellar biosynthesis protein, FliO YP_001474789.1 3693485 R 425104 CDS YP_001474790.1 157376190 5612045 complement(3693871..3694254) 1 NC_009831.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 3694254 fliN 5612045 fliN Shewanella sediminis HAW-EB3 flagellar motor switch protein YP_001474790.1 3693871 R 425104 CDS YP_001474791.1 157376191 5612258 complement(3694360..3695385) 1 NC_009831.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 3695385 fliM 5612258 fliM Shewanella sediminis HAW-EB3 flagellar motor switch protein FliM YP_001474791.1 3694360 R 425104 CDS YP_001474792.1 157376192 5612259 complement(3695427..3695948) 1 NC_009831.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 3695948 fliL 5612259 fliL Shewanella sediminis HAW-EB3 flagellar basal body-associated protein FliL YP_001474792.1 3695427 R 425104 CDS YP_001474793.1 157376193 5612260 complement(3696068..3697897) 1 NC_009831.1 KEGG: slo:Shew_1371 flagellar hook-length control protein; flagellar hook-length control protein 3697897 5612260 Ssed_3061 Shewanella sediminis HAW-EB3 flagellar hook-length control protein YP_001474793.1 3696068 R 425104 CDS YP_001474794.1 157376194 5612261 complement(3698056..3698502) 1 NC_009831.1 KEGG: slo:Shew_1370 flagellar export protein FliJ; flagellar export protein FliJ 3698502 5612261 Ssed_3062 Shewanella sediminis HAW-EB3 flagellar export protein FliJ YP_001474794.1 3698056 R 425104 CDS YP_001474795.1 157376195 5612011 complement(3698569..3699909) 1 NC_009831.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 3699909 fliI 5612011 fliI Shewanella sediminis HAW-EB3 flagellum-specific ATP synthase YP_001474795.1 3698569 R 425104 CDS YP_001474796.1 157376196 5612012 complement(3700030..3701034) 1 NC_009831.1 KEGG: shm:Shewmr7_1351 flagellar assembly protein FliH; flagellar assembly protein FliH 3701034 5612012 Ssed_3064 Shewanella sediminis HAW-EB3 flagellar assembly protein FliH YP_001474796.1 3700030 R 425104 CDS YP_001474797.1 157376197 5612013 complement(3701034..3702083) 1 NC_009831.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 3702083 fliG 5612013 fliG Shewanella sediminis HAW-EB3 flagellar motor switch protein G YP_001474797.1 3701034 R 425104 CDS YP_001474798.1 157376198 5612014 complement(3702073..3703782) 1 NC_009831.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 3703782 fliF 5612014 fliF Shewanella sediminis HAW-EB3 flagellar MS-ring protein YP_001474798.1 3702073 R 425104 CDS YP_001474799.1 157376199 5611795 complement(3703859..3704191) 1 NC_009831.1 KEGG: slo:Shew_1365 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 3704191 5611795 Ssed_3067 Shewanella sediminis HAW-EB3 flagellar hook-basal body complex subunit FliE YP_001474799.1 3703859 R 425104 CDS YP_001474800.1 157376200 5611796 complement(3704516..3705874) 1 NC_009831.1 KEGG: slo:Shew_1364 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 3705874 5611796 Ssed_3068 Shewanella sediminis HAW-EB3 two component, sigma54 specific, Fis family transcriptional regulator YP_001474800.1 3704516 R 425104 CDS YP_001474801.1 157376201 5611797 complement(3705867..3706982) 1 NC_009831.1 KEGG: spc:Sputcn32_2579 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 3706982 5611797 Ssed_3069 Shewanella sediminis HAW-EB3 PAS/PAC sensor signal transduction histidine kinase YP_001474801.1 3705867 R 425104 CDS YP_001474802.1 157376202 5611798 complement(3707277..3708710) 1 NC_009831.1 KEGG: slo:Shew_1362 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 3708710 5611798 Ssed_3070 Shewanella sediminis HAW-EB3 sigma-54 dependent trancsriptional regulator YP_001474802.1 3707277 R 425104 CDS YP_001474803.1 157376203 5611938 complement(3709001..3709411) 1 NC_009831.1 flagellin specific chaperone; flagellar protein FliS 3709411 fliS 5611938 fliS Shewanella sediminis HAW-EB3 flagellar protein FliS YP_001474803.1 3709001 R 425104 CDS YP_001474804.1 157376204 5611939 complement(3709422..3709748) 1 NC_009831.1 KEGG: slo:Shew_1360 hypothetical protein; hypothetical protein 3709748 5611939 Ssed_3072 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474804.1 3709422 R 425104 CDS YP_001474805.1 157376205 5611940 complement(3709776..3711149) 1 NC_009831.1 KEGG: slo:Shew_1359 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain-containing protein 3711149 5611940 Ssed_3073 Shewanella sediminis HAW-EB3 flagellar hook-associated 2 domain-containing protein YP_001474805.1 3709776 R 425104 CDS YP_001474806.1 157376206 5611941 complement(3711202..3711591) 1 NC_009831.1 KEGG: slo:Shew_1358 flagellar protein FlaG protein; flagellar protein FlaG protein 3711591 5611941 Ssed_3074 Shewanella sediminis HAW-EB3 flagellar protein FlaG protein YP_001474806.1 3711202 R 425104 CDS YP_001474807.1 157376207 5611644 complement(3711699..3712517) 1 NC_009831.1 KEGG: son:SO3238 flagellin; flagellin 3712517 5611644 Ssed_3075 Shewanella sediminis HAW-EB3 flagellin YP_001474807.1 3711699 R 425104 CDS YP_001474808.1 157376208 5611645 complement(3712762..3713583) 1 NC_009831.1 KEGG: son:SO3238 flagellin; flagellin 3713583 5611645 Ssed_3076 Shewanella sediminis HAW-EB3 flagellin YP_001474808.1 3712762 R 425104 CDS YP_001474809.1 157376209 5611646 complement(3713650..3714840) 1 NC_009831.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 3714840 flgL 5611646 flgL Shewanella sediminis HAW-EB3 flagellar hook-associated protein FlgL YP_001474809.1 3713650 R 425104 CDS YP_001474810.1 157376210 5611626 complement(3714898..3716814) 1 NC_009831.1 KEGG: slo:Shew_1354 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 3716814 5611626 Ssed_3078 Shewanella sediminis HAW-EB3 flagellar hook-associated protein FlgK YP_001474810.1 3714898 R 425104 CDS YP_001474811.1 157376211 5611627 complement(3716891..3717904) 1 NC_009831.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 3717904 flgJ 5611627 flgJ Shewanella sediminis HAW-EB3 flagellar rod assembly protein/muramidase FlgJ YP_001474811.1 3716891 R 425104 CDS YP_001474812.1 157376212 5611628 complement(3718095..3719186) 1 NC_009831.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3719186 flgI 5611628 flgI Shewanella sediminis HAW-EB3 flagellar basal body P-ring protein YP_001474812.1 3718095 R 425104 CDS YP_001474813.1 157376213 5611629 complement(3719199..3719888) 1 NC_009831.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 3719888 flgH 5611629 flgH Shewanella sediminis HAW-EB3 flagellar basal body L-ring protein YP_001474813.1 3719199 R 425104 CDS YP_001474814.1 157376214 5611472 complement(3719899..3720687) 1 NC_009831.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 3720687 flgG 5611472 flgG Shewanella sediminis HAW-EB3 flagellar basal body rod protein FlgG YP_001474814.1 3719899 R 425104 CDS YP_001474815.1 157376215 5611473 complement(3720699..3721442) 1 NC_009831.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 3721442 flgF 5611473 flgF Shewanella sediminis HAW-EB3 flagellar basal body rod protein FlgF YP_001474815.1 3720699 R 425104 CDS YP_001474816.1 157376216 5611474 complement(3721649..3723013) 1 NC_009831.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 3723013 flgE 5611474 flgE Shewanella sediminis HAW-EB3 flagellar hook protein FlgE YP_001474816.1 3721649 R 425104 CDS YP_001474817.1 157376217 5611475 complement(3723198..3724046) 1 NC_009831.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 3724046 flgD 5611475 flgD Shewanella sediminis HAW-EB3 flagellar basal body rod modification protein YP_001474817.1 3723198 R 425104 CDS YP_001474818.1 157376218 5611002 complement(3724060..3724476) 1 NC_009831.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 3724476 flgC 5611002 flgC Shewanella sediminis HAW-EB3 flagellar basal body rod protein FlgC YP_001474818.1 3724060 R 425104 CDS YP_001474819.1 157376219 5611003 complement(3724479..3724877) 1 NC_009831.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 3724877 flgB 5611003 flgB Shewanella sediminis HAW-EB3 flagellar basal body rod protein FlgB YP_001474819.1 3724479 R 425104 CDS YP_001474820.1 157376220 5611004 complement(3725146..3725979) 1 NC_009831.1 KEGG: slo:Shew_1344 MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 3725979 5611004 Ssed_3088 Shewanella sediminis HAW-EB3 protein-glutamate O-methyltransferase YP_001474820.1 3725146 R 425104 CDS YP_001474821.1 157376221 5611005 complement(3726110..3727030) 1 NC_009831.1 KEGG: slo:Shew_1343 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein 3727030 5611005 Ssed_3089 Shewanella sediminis HAW-EB3 response regulator receiver modulated CheW protein YP_001474821.1 3726110 R 425104 CDS YP_001474822.1 157376222 5610898 3727170..3727949 1 NC_009831.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 3727949 flgA 5610898 flgA Shewanella sediminis HAW-EB3 flagellar basal body P-ring biosynthesis protein FlgA YP_001474822.1 3727170 D 425104 CDS YP_001474823.1 157376223 5610899 3728055..3728390 1 NC_009831.1 KEGG: slo:Shew_1341 anti-sigma-28 factor, FlgM; anti-sigma-28 factor FlgM 3728390 5610899 Ssed_3091 Shewanella sediminis HAW-EB3 anti-sigma-28 factor FlgM YP_001474823.1 3728055 D 425104 CDS YP_001474824.1 157376224 5610900 3728398..3728823 1 NC_009831.1 KEGG: slo:Shew_1340 FlgN family protein; FlgN family protein 3728823 5610900 Ssed_3092 Shewanella sediminis HAW-EB3 FlgN family protein YP_001474824.1 3728398 D 425104 CDS YP_001474825.1 157376225 5610901 complement(3729093..3729539) 1 NC_009831.1 KEGG: slo:Shew_1339 protein of unknown function DUF400; hypothetical protein 3729539 5610901 Ssed_3093 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474825.1 3729093 R 425104 CDS YP_001474826.1 157376226 5610983 complement(3729536..3730162) 1 NC_009831.1 KEGG: slo:Shew_1338 hypothetical protein; hypothetical protein 3730162 5610983 Ssed_3094 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474826.1 3729536 R 425104 CDS YP_001474827.1 157376227 5610984 3730519..3732303 1 NC_009831.1 KEGG: spc:Sputcn32_1449 hypothetical protein; hypothetical protein 3732303 5610984 Ssed_3095 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474827.1 3730519 D 425104 CDS YP_001474828.1 157376228 5610985 3732633..3733799 1 NC_009831.1 KEGG: slo:Shew_1337 hypothetical protein; hypothetical protein 3733799 5610985 Ssed_3096 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474828.1 3732633 D 425104 CDS YP_001474829.1 157376229 5610638 3734505..3735716 1 NC_009831.1 KEGG: vvu:VV1_0811 predicted nucleoside-diphosphate sugar epimerase; nucleoside-diphosphate sugar epimerase 3735716 5610638 Ssed_3097 Shewanella sediminis HAW-EB3 nucleoside-diphosphate sugar epimerase YP_001474829.1 3734505 D 425104 CDS YP_001474830.1 157376230 5613072 3735747..3736904 1 NC_009831.1 KEGG: vfi:VF0141 UDP-bacillosamine synthetase; UDP-bacillosamine synthetase 3736904 5613072 Ssed_3098 Shewanella sediminis HAW-EB3 UDP-bacillosamine synthetase YP_001474830.1 3735747 D 425104 CDS YP_001474831.1 157376231 5613073 3736897..3738060 1 NC_009831.1 KEGG: vpa:VP0199 NeuC; NeuC 3738060 5613073 Ssed_3099 Shewanella sediminis HAW-EB3 NeuC YP_001474831.1 3736897 D 425104 CDS YP_001474832.1 157376232 5613074 3738062..3739135 1 NC_009831.1 KEGG: vvy:VV0312 sialic acid synthase; N-acylneuraminate-9-phosphate synthase 3739135 5613074 Ssed_3100 Shewanella sediminis HAW-EB3 N-acylneuraminate-9-phosphate synthase YP_001474832.1 3738062 D 425104 CDS YP_001474833.1 157376233 5611086 3739146..3739766 1 NC_009831.1 KEGG: vfi:VF0144 sialic acid biosynthesis protein NeuD; sialic acid synthase 3739766 5611086 Ssed_3101 Shewanella sediminis HAW-EB3 sialic acid synthase YP_001474833.1 3739146 D 425104 CDS YP_001474834.1 157376234 5611087 3739768..3740826 1 NC_009831.1 KEGG: vfi:VF0145 mannose-1-phosphate guanyltransferase; mannose-1-phosphate guanylyltransferase 3740826 5611087 Ssed_3102 Shewanella sediminis HAW-EB3 mannose-1-phosphate guanylyltransferase YP_001474834.1 3739768 D 425104 CDS YP_001474835.1 157376235 5611088 3740823..3741803 1 NC_009831.1 KEGG: vvy:VV0315 predicted dehydrogenase; dehydrogenase 3741803 5611088 Ssed_3103 Shewanella sediminis HAW-EB3 dehydrogenase YP_001474835.1 3740823 D 425104 CDS YP_001474836.1 157376236 5611089 3741800..3742501 1 NC_009831.1 KEGG: vvy:VV0316 CMP-N-acetylneuraminic acid synthetase; N-acylneuraminate cytidylyltransferase 3742501 5611089 Ssed_3104 Shewanella sediminis HAW-EB3 N-acylneuraminate cytidylyltransferase YP_001474836.1 3741800 D 425104 CDS YP_001474837.1 157376237 5611117 3742495..3743253 1 NC_009831.1 KEGG: vvy:VV0317 flagellin modification protein A; flagellin modification protein A 3743253 5611117 Ssed_3105 Shewanella sediminis HAW-EB3 flagellin modification protein A YP_001474837.1 3742495 D 425104 CDS YP_001474838.1 157376238 5611118 3743257..3743808 1 NC_009831.1 KEGG: vvy:VV0322 acetyltransferase; acetyltransferase 3743808 5611118 Ssed_3106 Shewanella sediminis HAW-EB3 acetyltransferase YP_001474838.1 3743257 D 425104 CDS YP_001474839.1 157376239 5611119 3743957..3746482 1 NC_009831.1 KEGG: shw:Sputw3181_1377 protein of unknown function DUF115; hypothetical protein 3746482 5611119 Ssed_3107 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474839.1 3743957 D 425104 CDS YP_001474840.1 157376240 5611120 3746590..3747069 1 NC_009831.1 KEGG: slo:Shew_1316 hypothetical protein; hypothetical protein 3747069 5611120 Ssed_3108 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474840.1 3746590 D 425104 CDS YP_001474841.1 157376241 5611694 3747287..3747862 1 NC_009831.1 KEGG: sbl:Sbal_2970 hypothetical protein; hypothetical protein 3747862 5611694 Ssed_3109 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474841.1 3747287 D 425104 CDS YP_001474842.1 157376242 5611695 complement(3747999..3748922) 1 NC_009831.1 KEGG: slo:Shew_1314 hypothetical protein; hypothetical protein 3748922 5611695 Ssed_3110 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474842.1 3747999 R 425104 CDS YP_001474843.1 157376243 5611696 complement(3749078..3749710) 1 NC_009831.1 KEGG: slo:Shew_1313 transcriptional regulator, TetR family; TetR family transcriptional regulator 3749710 5611696 Ssed_3111 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001474843.1 3749078 R 425104 CDS YP_001474844.1 157376244 5611697 3749856..3750980 1 NC_009831.1 KEGG: slo:Shew_1312 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3750980 5611697 Ssed_3112 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001474844.1 3749856 D 425104 CDS YP_001474845.1 157376245 5613891 3750984..3754076 1 NC_009831.1 KEGG: slo:Shew_1311 acriflavin resistance protein; acriflavin resistance protein 3754076 5613891 Ssed_3113 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001474845.1 3750984 D 425104 CDS YP_001474846.1 157376246 5613892 3754341..3756344 1 NC_009831.1 KEGG: slo:Shew_1310 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3756344 5613892 Ssed_3114 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001474846.1 3754341 D 425104 CDS YP_001474847.1 157376247 5613893 3756811..3756960 1 NC_009831.1 KEGG: saz:Sama_2346 regulatory protein, TfoX family; TfoX family regulatory protein 3756960 5613893 Ssed_3115 Shewanella sediminis HAW-EB3 TfoX family regulatory protein YP_001474847.1 3756811 D 425104 CDS YP_001474848.1 157376248 5611013 complement(3757120..3757236) 1 NC_009831.1 KEGG: slo:Shew_1304 cyd operon protein YbgT; cyd operon protein YbgT 3757236 5611013 Ssed_3116 Shewanella sediminis HAW-EB3 cyd operon protein YbgT YP_001474848.1 3757120 R 425104 CDS YP_001474849.1 157376249 5611014 complement(3757252..3758391) 1 NC_009831.1 KEGG: slo:Shew_1303 cytochrome d ubiquinol oxidase, subunit II; alkaline phosphatase 3758391 5611014 Ssed_3117 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001474849.1 3757252 R 425104 CDS YP_001474850.1 157376250 5611015 complement(3758407..3759963) 1 NC_009831.1 KEGG: slo:Shew_1302 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase, subunit I 3759963 5611015 Ssed_3118 Shewanella sediminis HAW-EB3 cytochrome bd ubiquinol oxidase, subunit I YP_001474850.1 3758407 R 425104 CDS YP_001474851.1 157376251 5611016 complement(3761210..3765091) 1 NC_009831.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 3765091 5611016 Ssed_3119 Shewanella sediminis HAW-EB3 phosphoribosylformylglycinamidine synthase YP_001474851.1 3761210 R 425104 CDS YP_001474852.1 157376252 5611231 3765424..3766866 1 NC_009831.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase 3766866 5611231 Ssed_3120 Shewanella sediminis HAW-EB3 transglycosylase YP_001474852.1 3765424 D 425104 CDS YP_001474853.1 157376253 5611232 complement(3767283..3767816) 1 NC_009831.1 KEGG: saz:Sama_2352 cytidine/deoxycytidylate deaminase family protein; cytidine/deoxycytidylate deaminase family protein 3767816 5611232 Ssed_3121 Shewanella sediminis HAW-EB3 cytidine/deoxycytidylate deaminase family protein YP_001474853.1 3767283 R 425104 CDS YP_001474854.1 157376254 5611233 3767927..3768856 1 NC_009831.1 KEGG: saz:Sama_2353 GGDEF domain-like protein; diguanylate cyclase 3768856 5611233 Ssed_3122 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001474854.1 3767927 D 425104 CDS YP_001474855.1 157376255 5611234 complement(3768930..3770507) 1 NC_009831.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3770507 guaA 5611234 guaA Shewanella sediminis HAW-EB3 GMP synthase YP_001474855.1 3768930 R 425104 CDS YP_001474856.1 157376256 5611250 complement(3770634..3772106) 1 NC_009831.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 3772106 5611250 Ssed_3124 Shewanella sediminis HAW-EB3 inosine 5'-monophosphate dehydrogenase YP_001474856.1 3770634 R 425104 CDS YP_001474857.1 157376257 5611251 3772228..3773556 1 NC_009831.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3773556 xseA 5611251 xseA Shewanella sediminis HAW-EB3 exodeoxyribonuclease VII large subunit YP_001474857.1 3772228 D 425104 CDS YP_001474858.1 157376258 5611252 complement(3773632..3773988) 1 NC_009831.1 KEGG: mgm:Mmc1_1103 DsrE family protein; DsrE family protein 3773988 5611252 Ssed_3126 Shewanella sediminis HAW-EB3 DsrE family protein YP_001474858.1 3773632 R 425104 CDS YP_001474859.1 157376259 5611253 complement(3774013..3774588) 1 NC_009831.1 KEGG: gur:Gura_3310 methyltransferase type 11; type 11 methyltransferase 3774588 5611253 Ssed_3127 Shewanella sediminis HAW-EB3 type 11 methyltransferase YP_001474859.1 3774013 R 425104 CDS YP_001474860.1 157376260 5611246 3774674..3775345 1 NC_009831.1 KEGG: mgm:Mmc1_1102 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 3775345 5611246 Ssed_3128 Shewanella sediminis HAW-EB3 ArsR family transcriptional regulator YP_001474860.1 3774674 D 425104 CDS YP_001474861.1 157376261 5611247 complement(3775631..3776236) 1 NC_009831.1 KEGG: rme:Rmet_1780 methyltransferase type 11; type 11 methyltransferase 3776236 5611247 Ssed_3129 Shewanella sediminis HAW-EB3 type 11 methyltransferase YP_001474861.1 3775631 R 425104 CDS YP_001474862.1 157376262 5611248 3777387..3779141 1 NC_009831.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3779141 5611248 Ssed_3130 Shewanella sediminis HAW-EB3 prolyl-tRNA synthetase YP_001474862.1 3777387 D 425104 CDS YP_001474863.1 157376263 5611249 complement(3779253..3780482) 1 NC_009831.1 KEGG: slo:Shew_2605 phenylacetate-coenzyme A ligase; phenylacetate-coenzyme A ligase 3780482 5611249 Ssed_3131 Shewanella sediminis HAW-EB3 phenylacetate-coenzyme A ligase YP_001474863.1 3779253 R 425104 CDS YP_001474864.1 157376264 5611268 complement(3780533..3781351) 1 NC_009831.1 KEGG: slo:Shew_2606 ABC transporter-related protein; ABC transporter-like protein 3781351 5611268 Ssed_3132 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001474864.1 3780533 R 425104 CDS YP_001474865.1 157376265 5611269 complement(3781401..3782648) 1 NC_009831.1 KEGG: slo:Shew_2607 branched-chain amino acid ABC transporter; branched-chain amino acid ABC transporter 3782648 5611269 Ssed_3133 Shewanella sediminis HAW-EB3 branched-chain amino acid ABC transporter YP_001474865.1 3781401 R 425104 CDS YP_001474866.1 157376266 5611270 complement(3782879..3783952) 1 NC_009831.1 KEGG: slo:Shew_2608 inner-membrane translocator; inner-membrane translocator 3783952 5611270 Ssed_3134 Shewanella sediminis HAW-EB3 inner-membrane translocator YP_001474866.1 3782879 R 425104 CDS YP_001474867.1 157376267 5611290 complement(3784040..3784933) 1 NC_009831.1 KEGG: slo:Shew_2609 inner-membrane translocator; inner-membrane translocator 3784933 5611290 Ssed_3135 Shewanella sediminis HAW-EB3 inner-membrane translocator YP_001474867.1 3784040 R 425104 CDS YP_001474868.1 157376268 5611291 complement(3784930..3786894) 1 NC_009831.1 KEGG: slo:Shew_2610 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 3786894 5611291 Ssed_3136 Shewanella sediminis HAW-EB3 AMP-dependent synthetase/ligase YP_001474868.1 3784930 R 425104 CDS YP_001474869.1 157376269 5611292 complement(3786894..3787691) 1 NC_009831.1 KEGG: slo:Shew_2611 ABC transporter-related protein; ABC transporter-like protein 3787691 5611292 Ssed_3137 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001474869.1 3786894 R 425104 CDS YP_001474870.1 157376270 5611293 complement(3787888..3788928) 1 NC_009831.1 KEGG: slo:Shew_2612 hypothetical protein; hypothetical protein 3788928 5611293 Ssed_3138 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474870.1 3787888 R 425104 CDS YP_001474871.1 157376271 5611271 3789169..3792654 1 NC_009831.1 KEGG: slo:Shew_2613 integral membrane sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 3792654 5611271 Ssed_3139 Shewanella sediminis HAW-EB3 integral membrane sensor hybrid histidine kinase YP_001474871.1 3789169 D 425104 CDS YP_001474872.1 157376272 5611272 complement(3792615..3793277) 1 NC_009831.1 KEGG: slo:Shew_2614 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3793277 5611272 Ssed_3140 Shewanella sediminis HAW-EB3 two component LuxR family transcriptional regulator YP_001474872.1 3792615 R 425104 CDS YP_001474873.1 157376273 5611273 3793709..3794836 1 NC_009831.1 KEGG: slo:Shew_2615 patatin; patatin 3794836 5611273 Ssed_3141 Shewanella sediminis HAW-EB3 patatin YP_001474873.1 3793709 D 425104 CDS YP_001474874.1 157376274 5611274 complement(3794923..3795636) 1 NC_009831.1 KEGG: ppr:PBPRB1925 hypothetical protein; hypothetical protein 3795636 5611274 Ssed_3142 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474874.1 3794923 R 425104 CDS YP_001474875.1 157376275 5614192 complement(3795647..3797596) 1 NC_009831.1 KEGG: slo:Shew_2617 potassium efflux system protein; potassium efflux system protein 3797596 5614192 Ssed_3143 Shewanella sediminis HAW-EB3 potassium efflux system protein YP_001474875.1 3795647 R 425104 CDS YP_001474876.1 157376276 5614193 3797781..3798662 1 NC_009831.1 KEGG: she:Shewmr4_2624 diguanylate cyclase; diguanylate cyclase 3798662 5614193 Ssed_3144 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001474876.1 3797781 D 425104 CDS YP_001474877.1 157376277 5614194 complement(3798643..3800127) 1 NC_009831.1 KEGG: she:Shewmr4_2625 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 3800127 5614194 Ssed_3145 Shewanella sediminis HAW-EB3 tRNA(Ile)-lysidine synthetase YP_001474877.1 3798643 R 425104 CDS YP_001474878.1 157376278 5614195 complement(3800129..3803602) 1 NC_009831.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3803602 dnaE 5614195 dnaE Shewanella sediminis HAW-EB3 DNA polymerase III subunit alpha YP_001474878.1 3800129 R 425104 CDS YP_001474879.1 157376279 5610178 complement(3803736..3804377) 1 NC_009831.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3804377 rnhB 5610178 rnhB Shewanella sediminis HAW-EB3 ribonuclease HII YP_001474879.1 3803736 R 425104 CDS YP_001474880.1 157376280 5610179 complement(3804411..3805553) 1 NC_009831.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3805553 lpxB 5610179 lpxB Shewanella sediminis HAW-EB3 lipid-A-disaccharide synthase YP_001474880.1 3804411 R 425104 CDS YP_001474881.1 157376281 5610180 complement(3805634..3806401) 1 NC_009831.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3806401 5610180 Ssed_3149 Shewanella sediminis HAW-EB3 UDP-N-acetylglucosamine acyltransferase YP_001474881.1 3805634 R 425104 CDS YP_001474882.1 157376282 5610181 complement(3806398..3806859) 1 NC_009831.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3806859 fabZ 5610181 fabZ Shewanella sediminis HAW-EB3 (3R)-hydroxymyristoyl-ACP dehydratase YP_001474882.1 3806398 R 425104 CDS YP_001474883.1 157376283 5610199 complement(3806889..3807914) 1 NC_009831.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3807914 lpxD 5610199 lpxD Shewanella sediminis HAW-EB3 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001474883.1 3806889 R 425104 CDS YP_001474884.1 157376284 5610200 complement(3807934..3808428) 1 NC_009831.1 KEGG: slo:Shew_2626 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 3808428 5610200 Ssed_3152 Shewanella sediminis HAW-EB3 outer membrane chaperone Skp YP_001474884.1 3807934 R 425104 CDS YP_001474885.1 157376285 5610201 complement(3808498..3810981) 1 NC_009831.1 KEGG: slo:Shew_2627 surface antigen (D15); surface antigen (D15) 3810981 5610201 Ssed_3153 Shewanella sediminis HAW-EB3 surface antigen (D15) YP_001474885.1 3808498 R 425104 CDS YP_001474886.1 157376286 5610113 complement(3811011..3812396) 1 NC_009831.1 KEGG: slo:Shew_2628 membrane-associated zinc metalloprotease; membrane-associated zinc metalloprotease 3812396 5610113 Ssed_3154 Shewanella sediminis HAW-EB3 membrane-associated zinc metalloprotease YP_001474886.1 3811011 R 425104 CDS YP_001474887.1 157376287 5610114 complement(3812416..3813603) 1 NC_009831.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3813603 5610114 Ssed_3155 Shewanella sediminis HAW-EB3 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001474887.1 3812416 R 425104 CDS YP_001474888.1 157376288 5610115 complement(3813607..3814464) 1 NC_009831.1 KEGG: shm:Shewmr7_2703 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 3814464 5610115 Ssed_3156 Shewanella sediminis HAW-EB3 phosphatidate cytidylyltransferase YP_001474888.1 3813607 R 425104 CDS YP_001474889.1 157376289 5610116 complement(3814483..3815277) 1 NC_009831.1 KEGG: slo:Shew_2631 UDP diphosphate synthase; di-trans, poly-cis-decaprenylcistransferase 3815277 5610116 Ssed_3157 Shewanella sediminis HAW-EB3 di-trans, poly-cis-decaprenylcistransferase YP_001474889.1 3814483 R 425104 CDS YP_001474890.1 157376290 5610303 complement(3815358..3815915) 1 NC_009831.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3815915 frr 5610303 frr Shewanella sediminis HAW-EB3 ribosome recycling factor YP_001474890.1 3815358 R 425104 CDS YP_001474891.1 157376291 5610304 complement(3815990..3816727) 1 NC_009831.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3816727 pyrH 5610304 pyrH Shewanella sediminis HAW-EB3 uridylate kinase YP_001474891.1 3815990 R 425104 CDS YP_001474892.1 157376292 5610305 complement(3816817..3817665) 1 NC_009831.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3817665 tsf 5610305 tsf Shewanella sediminis HAW-EB3 elongation factor Ts YP_001474892.1 3816817 R 425104 CDS YP_001474893.1 157376293 5610306 complement(3817800..3818528) 1 NC_009831.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 3818528 rpsB 5610306 rpsB Shewanella sediminis HAW-EB3 30S ribosomal protein S2 YP_001474893.1 3817800 R 425104 CDS YP_001474894.1 157376294 5610747 3818881..3819678 1 NC_009831.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 3819678 5610747 Ssed_3162 Shewanella sediminis HAW-EB3 methionine aminopeptidase YP_001474894.1 3818881 D 425104 CDS YP_001474895.1 157376295 5610748 3819755..3822334 1 NC_009831.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3822334 5610748 Ssed_3163 Shewanella sediminis HAW-EB3 PII uridylyl-transferase YP_001474895.1 3819755 D 425104 CDS YP_001474896.1 157376296 5610749 3822527..3823351 1 NC_009831.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3823351 dapD 5610749 dapD Shewanella sediminis HAW-EB3 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001474896.1 3822527 D 425104 CDS YP_001474897.1 157376297 5610750 3823604..3823948 1 NC_009831.1 KEGG: slo:Shew_2639 hypothetical protein; hypothetical protein 3823948 5610750 Ssed_3165 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474897.1 3823604 D 425104 CDS YP_001474898.1 157376298 5610909 complement(3824143..3824976) 1 NC_009831.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 3824976 purU 5610909 purU Shewanella sediminis HAW-EB3 formyltetrahydrofolate deformylase YP_001474898.1 3824143 R 425104 CDS YP_001474899.1 157376299 5610910 complement(3825018..3826487) 1 NC_009831.1 KEGG: slo:Shew_2641 PTS system, glucose-like IIB subunint; PTS system glucose-like transporter subunit IIB 3826487 5610910 Ssed_3167 Shewanella sediminis HAW-EB3 PTS system glucose-like transporter subunit IIB YP_001474899.1 3825018 R 425104 CDS YP_001474900.1 157376300 5610911 complement(3826439..3826903) 1 NC_009831.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 3826903 5610911 Ssed_3168 Shewanella sediminis HAW-EB3 flavodoxin YP_001474900.1 3826439 R 425104 CDS YP_001474901.1 157376301 5610912 complement(3827342..3828178) 1 NC_009831.1 KEGG: slo:Shew_2643 pseudouridylate synthase; pseudouridylate synthase 3828178 5610912 Ssed_3169 Shewanella sediminis HAW-EB3 pseudouridylate synthase YP_001474901.1 3827342 R 425104 CDS YP_001474902.1 157376302 5610717 complement(3828180..3828500) 1 NC_009831.1 KEGG: son:SO1619 hypothetical protein; hypothetical protein 3828500 5610717 Ssed_3170 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474902.1 3828180 R 425104 CDS YP_001474903.1 157376303 5610718 3828741..3829754 1 NC_009831.1 KEGG: slo:Shew_2645 hypothetical protein; hypothetical protein 3829754 5610718 Ssed_3171 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474903.1 3828741 D 425104 CDS YP_001474904.1 157376304 5610719 3829751..3830140 1 NC_009831.1 KEGG: slo:Shew_2646 hypothetical protein; hypothetical protein 3830140 5610719 Ssed_3172 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474904.1 3829751 D 425104 CDS YP_001474905.1 157376305 5611144 complement(3831663..3832310) 1 NC_009831.1 KEGG: slo:Shew_2648 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3832310 5611144 Ssed_3173 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001474905.1 3831663 R 425104 CDS YP_001474906.1 157376306 5611145 3832792..3833022 1 NC_009831.1 KEGG: shn:Shewana3_2830 hypothetical protein; hypothetical protein 3833022 5611145 Ssed_3174 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474906.1 3832792 D 425104 CDS YP_001474907.1 157376307 5611146 complement(3833030..3833386) 1 NC_009831.1 KEGG: shw:Sputw3181_2770 hypothetical protein; hypothetical protein 3833386 5611146 Ssed_3175 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474907.1 3833030 R 425104 CDS YP_001474908.1 157376308 5611147 3833549..3833881 1 NC_009831.1 KEGG: sfr:Sfri_1252 hypothetical protein; hypothetical protein 3833881 5611147 Ssed_3176 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474908.1 3833549 D 425104 CDS YP_001474909.1 157376309 5611408 3833881..3834654 1 NC_009831.1 KEGG: slo:Shew_2652 hypothetical protein; hypothetical protein 3834654 5611408 Ssed_3177 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474909.1 3833881 D 425104 CDS YP_001474910.1 157376310 5611409 complement(3834700..3835353) 1 NC_009831.1 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 3835353 5611409 Ssed_3178 Shewanella sediminis HAW-EB3 SecY interacting protein Syd YP_001474910.1 3834700 R 425104 CDS YP_001474911.1 157376311 5611410 3835399..3836271 1 NC_009831.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3836271 queF 5611410 queF Shewanella sediminis HAW-EB3 7-cyano-7-deazaguanine reductase YP_001474911.1 3835399 D 425104 CDS YP_001474912.1 157376312 5611411 complement(3836525..3837304) 1 NC_009831.1 hypothetical protein 3837304 5611411 Ssed_3180 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474912.1 3836525 R 425104 CDS YP_001474913.1 157376313 5611556 complement(3837413..3838099) 1 NC_009831.1 KEGG: vfi:VF0867 hypothetical protein; hypothetical protein 3838099 5611556 Ssed_3181 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474913.1 3837413 R 425104 CDS YP_001474914.1 157376314 5611557 complement(3838297..3839199) 1 NC_009831.1 KEGG: son:SO1607 transcriptional regulator, LysR family; LysR family transcriptional regulator 3839199 5611557 Ssed_3182 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474914.1 3838297 R 425104 CDS YP_001474915.1 157376315 5611558 complement(3839296..3840204) 1 NC_009831.1 KEGG: sbl:Sbal_1430 transcriptional regulator, LysR family; LysR family transcriptional regulator 3840204 5611558 Ssed_3183 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474915.1 3839296 R 425104 CDS YP_001474916.1 157376316 5611559 3840370..3842370 1 NC_009831.1 KEGG: son:SO1606 metallo-beta-lactamase superfamily protein; metallo-beta-lactamase superfamily protein 3842370 5611559 Ssed_3184 Shewanella sediminis HAW-EB3 metallo-beta-lactamase superfamily protein YP_001474916.1 3840370 D 425104 CDS YP_001474917.1 157376317 5611885 3842878..3844068 1 NC_009831.1 KEGG: slo:Shew_2655 hypothetical protein; hypothetical protein 3844068 5611885 Ssed_3185 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474917.1 3842878 D 425104 CDS YP_001474918.1 157376318 5611886 complement(3844311..3845249) 1 NC_009831.1 KEGG: sfr:Sfri_1245 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 3845249 5611886 Ssed_3186 Shewanella sediminis HAW-EB3 4'-phosphopantetheinyl transferase YP_001474918.1 3844311 R 425104 CDS YP_001474919.1 157376319 5611887 3845495..3847420 1 NC_009831.1 KEGG: pca:Pcar_2967 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis protein-like protein 3847420 5611887 Ssed_3187 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein-like protein YP_001474919.1 3845495 D 425104 CDS YP_001474920.1 157376320 5611888 3847575..3848828 1 NC_009831.1 KEGG: aha:AHA_2094 HD domain protein; HD domain-containing protein 3848828 5611888 Ssed_3188 Shewanella sediminis HAW-EB3 HD domain-containing protein YP_001474920.1 3847575 D 425104 CDS YP_001474921.1 157376321 5612192 3849052..3849642 1 NC_009831.1 KEGG: rfr:Rfer_3639 sigma-24 (FecI-like); sigma-24 FecI-like protein 3849642 5612192 Ssed_3189 Shewanella sediminis HAW-EB3 sigma-24 FecI-like protein YP_001474921.1 3849052 D 425104 CDS YP_001474922.1 157376322 5612193 3849791..3850798 1 NC_009831.1 KEGG: sfr:Sfri_1725 permease; permease 3850798 5612193 Ssed_3190 Shewanella sediminis HAW-EB3 permease YP_001474922.1 3849791 D 425104 CDS YP_001474923.1 157376323 5612194 3850803..3851039 1 NC_009831.1 KEGG: tbd:Tbd_1429 thiol-disulfide isomerase/thioredoxin; thiol-disulfide isomerase/thioredoxin 3851039 5612194 Ssed_3191 Shewanella sediminis HAW-EB3 thiol-disulfide isomerase/thioredoxin YP_001474923.1 3850803 D 425104 CDS YP_001474924.1 157376324 5611993 3851229..3851708 1 NC_009831.1 KEGG: shm:Shewmr7_0636 protein of unknown function DUF985; hypothetical protein 3851708 5611993 Ssed_3192 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474924.1 3851229 D 425104 CDS YP_001474925.1 157376325 5611994 3851960..3852163 1 NC_009831.1 KEGG: son:SO0439 hypothetical protein; hypothetical protein 3852163 5611994 Ssed_3193 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474925.1 3851960 D 425104 CDS YP_001474926.1 157376326 5611995 complement(3852294..3853589) 1 NC_009831.1 KEGG: ppr:PBPRB1123 hypothetical protein; hypothetical protein 3853589 5611995 Ssed_3194 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474926.1 3852294 R 425104 CDS YP_001474927.1 157376327 5611996 complement(3853586..3854269) 1 NC_009831.1 KEGG: ppr:PBPRB1124 ABC transporter, ATP-binding protein; ABC transporter ATP-binding protein 3854269 5611996 Ssed_3195 Shewanella sediminis HAW-EB3 ABC transporter ATP-binding protein YP_001474927.1 3853586 R 425104 CDS YP_001474928.1 157376328 5612082 complement(3854404..3855636) 1 NC_009831.1 KEGG: ppr:PBPRB1125 hypothetical protein; hypothetical protein 3855636 5612082 Ssed_3196 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474928.1 3854404 R 425104 CDS YP_001474929.1 157376329 5612083 complement(3855626..3856909) 1 NC_009831.1 KEGG: ppr:PBPRB1126 hypothetical protein; hypothetical protein 3856909 5612083 Ssed_3197 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474929.1 3855626 R 425104 CDS YP_001474930.1 157376330 5612084 complement(3856966..3857733) 1 NC_009831.1 KEGG: ppr:PBPRB1127 hypothetical protein; hypothetical protein 3857733 5612084 Ssed_3198 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474930.1 3856966 R 425104 CDS YP_001474931.1 157376331 5612085 3858577..3861495 1 NC_009831.1 KEGG: mac:MA0247 hypothetical protein; hypothetical protein 3861495 5612085 Ssed_3199 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474931.1 3858577 D 425104 CDS YP_001474932.1 157376332 5612727 complement(3862123..3864171) 1 NC_009831.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3864171 5612727 Ssed_3200 Shewanella sediminis HAW-EB3 elongation factor G YP_001474932.1 3862123 R 425104 CDS YP_001474933.1 157376333 5612728 3864571..3865437 1 NC_009831.1 KEGG: slo:Shew_2664 transcriptional regulator; transcriptional regulator 3865437 5612728 Ssed_3201 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001474933.1 3864571 D 425104 CDS YP_001474934.1 157376334 5612729 3865437..3873731 1 NC_009831.1 KEGG: slo:Shew_2665 beta-ketoacyl synthase; erythronolide synthase 3873731 5612729 Ssed_3202 Shewanella sediminis HAW-EB3 erythronolide synthase YP_001474934.1 3865437 D 425104 CDS YP_001474935.1 157376335 5612730 3873731..3876028 1 NC_009831.1 KEGG: ppr:PBPRA1459 omega-3 polyunsaturated fatty acid synthase PfaB; omega-3 polyunsaturated fatty acid synthase PfaB 3876028 5612730 Ssed_3203 Shewanella sediminis HAW-EB3 omega-3 polyunsaturated fatty acid synthase PfaB YP_001474935.1 3873731 D 425104 CDS YP_001474936.1 157376336 5612735 3876028..3881841 1 NC_009831.1 KEGG: ppr:PBPRA1458 omega-3 polyunsaturated fatty acid synthase PfaC; omega-3 polyunsaturated fatty acid synthase PfaC 3881841 5612735 Ssed_3204 Shewanella sediminis HAW-EB3 omega-3 polyunsaturated fatty acid synthase PfaC YP_001474936.1 3876028 D 425104 CDS YP_001474937.1 157376337 5612736 3882033..3883658 1 NC_009831.1 KEGG: slo:Shew_2668 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 3883658 5612736 Ssed_3205 Shewanella sediminis HAW-EB3 2-nitropropane dioxygenase YP_001474937.1 3882033 D 425104 CDS YP_001474938.1 157376338 5612737 complement(3883982..3885247) 1 NC_009831.1 KEGG: sdn:Sden_2088 esterase; esterase 3885247 5612737 Ssed_3206 Shewanella sediminis HAW-EB3 esterase YP_001474938.1 3883982 R 425104 CDS YP_001474939.1 157376339 5612738 3885693..3887117 1 NC_009831.1 KEGG: vfi:VF1052 transporter, divalent anion:sodium symporter family; divalent anion:sodium symporter family protein 3887117 5612738 Ssed_3207 Shewanella sediminis HAW-EB3 divalent anion:sodium symporter family protein YP_001474939.1 3885693 D 425104 CDS YP_001474940.1 157376340 5613393 3887296..3888651 1 NC_009831.1 KEGG: vfi:VF1053 sensory transduction protein kinase; sensory transduction protein kinase 3888651 5613393 Ssed_3208 Shewanella sediminis HAW-EB3 sensory transduction protein kinase YP_001474940.1 3887296 D 425104 CDS YP_001474941.1 157376341 5613394 3888638..3889111 1 NC_009831.1 KEGG: ppr:PBPRA1218 chemotaxis protein CheY; chemotaxis protein CheY 3889111 5613394 Ssed_3209 Shewanella sediminis HAW-EB3 chemotaxis protein CheY YP_001474941.1 3888638 D 425104 CDS YP_001474942.1 157376342 5613395 complement(3889152..3889961) 1 NC_009831.1 KEGG: sfr:Sfri_0228 regulatory protein RecX; regulatory protein RecX 3889961 5613395 Ssed_3210 Shewanella sediminis HAW-EB3 regulatory protein RecX YP_001474942.1 3889152 R 425104 CDS YP_001474943.1 157376343 5613318 complement(3890171..3892357) 1 NC_009831.1 KEGG: shw:Sputw3181_0744 uncharacterized domain; hypothetical protein 3892357 5613318 Ssed_3211 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474943.1 3890171 R 425104 CDS YP_001474944.1 157376344 5613319 complement(3892660..3894144) 1 NC_009831.1 KEGG: vpa:VPA0362 outer membrane protein; outer membrane protein 3894144 5613319 Ssed_3212 Shewanella sediminis HAW-EB3 outer membrane protein YP_001474944.1 3892660 R 425104 CDS YP_001474945.1 157376345 5613320 complement(3894146..3897229) 1 NC_009831.1 KEGG: vpa:VPA0363 efflux protein; efflux protein 3897229 5613320 Ssed_3213 Shewanella sediminis HAW-EB3 efflux protein YP_001474945.1 3894146 R 425104 CDS YP_001474946.1 157376346 5613321 complement(3897238..3898341) 1 NC_009831.1 KEGG: vpa:VPA0364 efflux protein; efflux protein 3898341 5613321 Ssed_3214 Shewanella sediminis HAW-EB3 efflux protein YP_001474946.1 3897238 R 425104 CDS YP_001474947.1 157376347 5613430 complement(3898432..3899322) 1 NC_009831.1 KEGG: vpa:VPA0365 transcriptional regulator protein; transcriptional regulator protein 3899322 5613430 Ssed_3215 Shewanella sediminis HAW-EB3 transcriptional regulator protein YP_001474947.1 3898432 R 425104 CDS YP_001474948.1 157376348 5613431 complement(3899480..3900682) 1 NC_009831.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3900682 5613431 Ssed_3216 Shewanella sediminis HAW-EB3 tryptophan synthase subunit beta YP_001474948.1 3899480 R 425104 CDS YP_001474949.1 157376349 5613432 complement(3900856..3903711) 1 NC_009831.1 KEGG: cps:CPS_3258 sensory box/GGDEF/GAF/EAL domain protein; signal transduction protein 3903711 5613432 Ssed_3217 Shewanella sediminis HAW-EB3 signal transduction protein YP_001474949.1 3900856 R 425104 CDS YP_001474950.1 157376350 5613433 complement(3904199..3906745) 1 NC_009831.1 KEGG: pha:PSHAb0113 TonB-dependent receptor for Fe; TonB-dependent receptor for Fe 3906745 5613433 Ssed_3218 Shewanella sediminis HAW-EB3 TonB-dependent receptor for Fe YP_001474950.1 3904199 R 425104 CDS YP_001474951.1 157376351 5613672 complement(3907135..3907677) 1 NC_009831.1 hypothetical protein 3907677 5613672 Ssed_3219 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474951.1 3907135 R 425104 CDS YP_001474952.1 157376352 5613673 complement(3908002..3910308) 1 NC_009831.1 KEGG: slo:Shew_2669 penicillin amidase; penicillin amidase 3910308 5613673 Ssed_3220 Shewanella sediminis HAW-EB3 penicillin amidase YP_001474952.1 3908002 R 425104 CDS YP_001474953.1 157376353 5613674 complement(3910442..3911338) 1 NC_009831.1 KEGG: slo:Shew_2670 transcriptional regulator, LysR family; LysR family transcriptional regulator 3911338 5613674 Ssed_3221 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001474953.1 3910442 R 425104 CDS YP_001474954.1 157376354 5613675 complement(3911803..3912753) 1 NC_009831.1 KEGG: slo:Shew_2671 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase 3912753 5613675 Ssed_3222 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001474954.1 3911803 R 425104 CDS YP_001474955.1 157376355 5613798 complement(3913091..3913681) 1 NC_009831.1 involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; carnitine operon protein CaiE 3913681 5613798 Ssed_3223 Shewanella sediminis HAW-EB3 carnitine operon protein CaiE YP_001474955.1 3913091 R 425104 CDS YP_001474956.1 157376356 5613799 complement(3914060..3914911) 1 NC_009831.1 KEGG: drm:Dred_0577 MaoC domain protein dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 3914911 5613799 Ssed_3224 Shewanella sediminis HAW-EB3 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase YP_001474956.1 3914060 R 425104 CDS YP_001474957.1 157376357 5613800 complement(3915094..3915879) 1 NC_009831.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; carnitinyl-CoA dehydratase 3915879 5613800 Ssed_3225 Shewanella sediminis HAW-EB3 carnitinyl-CoA dehydratase YP_001474957.1 3915094 R 425104 CDS YP_001474958.1 157376358 5613801 complement(3915951..3917504) 1 NC_009831.1 KEGG: slo:Shew_2673 AMP-dependent synthetase and ligase; crotonobetaine/carnitine-CoA ligase 3917504 caiC 5613801 caiC Shewanella sediminis HAW-EB3 crotonobetaine/carnitine-CoA ligase YP_001474958.1 3915951 R 425104 CDS YP_001474959.1 157376359 5613763 complement(3917515..3918741) 1 NC_009831.1 catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine; crotonobetainyl-CoA:carnitine CoA-transferase 3918741 5613763 Ssed_3227 Shewanella sediminis HAW-EB3 crotonobetainyl-CoA:carnitine CoA-transferase YP_001474959.1 3917515 R 425104 CDS YP_001474960.1 157376360 5613764 complement(3918953..3920089) 1 NC_009831.1 catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA; crotonobetainyl-CoA dehydrogenase 3920089 5613764 Ssed_3228 Shewanella sediminis HAW-EB3 crotonobetainyl-CoA dehydrogenase YP_001474960.1 3918953 R 425104 CDS YP_001474961.1 157376361 5613765 complement(3920146..3921690) 1 NC_009831.1 catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism; L-carnitine/gamma-butyrobetaine antiporter 3921690 5613765 Ssed_3229 Shewanella sediminis HAW-EB3 L-carnitine/gamma-butyrobetaine antiporter YP_001474961.1 3920146 R 425104 CDS YP_001474962.1 157376362 5611630 3922807..3923580 1 NC_009831.1 required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase; electron transfer flavoprotein FixA 3923580 5611630 Ssed_3230 Shewanella sediminis HAW-EB3 electron transfer flavoprotein FixA YP_001474962.1 3922807 D 425104 CDS YP_001474963.1 157376363 5611631 3923589..3924533 1 NC_009831.1 KEGG: slo:Shew_2678 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 3924533 5611631 Ssed_3231 Shewanella sediminis HAW-EB3 electron transfer flavoprotein subunit alpha YP_001474963.1 3923589 D 425104 CDS YP_001474964.1 157376364 5611632 3924625..3925917 1 NC_009831.1 KEGG: slo:Shew_2679 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3925917 5611632 Ssed_3232 Shewanella sediminis HAW-EB3 FAD dependent oxidoreductase YP_001474964.1 3924625 D 425104 CDS YP_001474965.1 157376365 5611633 3925914..3926201 1 NC_009831.1 KEGG: slo:Shew_2680 ferredoxin; ferredoxin 3926201 5611633 Ssed_3233 Shewanella sediminis HAW-EB3 ferredoxin YP_001474965.1 3925914 D 425104 CDS YP_001474966.1 157376366 5614060 3926712..3928049 1 NC_009831.1 KEGG: slo:Shew_2681 general substrate transporter; general substrate transporter 3928049 5614060 Ssed_3234 Shewanella sediminis HAW-EB3 general substrate transporter YP_001474966.1 3926712 D 425104 CDS YP_001474967.1 157376367 5614061 3928419..3929552 1 NC_009831.1 KEGG: slo:Shew_2682 hypothetical protein; hypothetical protein 3929552 5614061 Ssed_3235 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474967.1 3928419 D 425104 CDS YP_001474968.1 157376368 5614062 3929723..3931357 1 NC_009831.1 KEGG: aha:AHA_1709 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 3931357 5614062 Ssed_3236 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001474968.1 3929723 D 425104 CDS YP_001474969.1 157376369 5614063 complement(3931514..3931780) 1 NC_009831.1 hypothetical protein 3931780 5614063 Ssed_3237 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474969.1 3931514 R 425104 CDS YP_001474970.1 157376370 5613109 3931968..3932219 1 NC_009831.1 KEGG: sfr:Sfri_3228 hypothetical protein; hypothetical protein 3932219 5613109 Ssed_3238 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474970.1 3931968 D 425104 CDS YP_001474971.1 157376371 5613110 complement(3932235..3932678) 1 NC_009831.1 KEGG: slo:Shew_3184 hypothetical protein; hypothetical protein 3932678 5613110 Ssed_3239 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474971.1 3932235 R 425104 CDS YP_001474972.1 157376372 5613111 complement(3933091..3933999) 1 NC_009831.1 KEGG: vvu:VV2_0173 transcriptional regulator; transcriptional regulator 3933999 5613111 Ssed_3240 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001474972.1 3933091 R 425104 CDS YP_001474973.1 157376373 5613112 3934167..3934601 1 NC_009831.1 KEGG: vvu:VV2_0174 hypothetical protein; hypothetical protein 3934601 5613112 Ssed_3241 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474973.1 3934167 D 425104 CDS YP_001474974.1 157376374 5614030 complement(3934779..3937214) 1 NC_009831.1 KEGG: cps:CPS_1347 TonB-dependent receptor; TonB-dependent receptor 3937214 5614030 Ssed_3242 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001474974.1 3934779 R 425104 CDS YP_001474975.1 157376375 5614031 complement(3937439..3937975) 1 NC_009831.1 KEGG: gme:Gmet_2801 hypothetical protein; hypothetical protein 3937975 5614031 Ssed_3243 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474975.1 3937439 R 425104 CDS YP_001474976.1 157376376 5614032 complement(3938038..3939024) 1 NC_009831.1 KEGG: shm:Shewmr7_3906 hypothetical protein; hypothetical protein 3939024 5614032 Ssed_3244 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474976.1 3938038 R 425104 CDS YP_001474977.1 157376377 5614033 3939309..3939635 1 NC_009831.1 KEGG: slo:Shew_2694 propeptide, PepSY amd peptidase M4; propeptide, PepSY amd peptidase M4 3939635 5614033 Ssed_3245 Shewanella sediminis HAW-EB3 propeptide, PepSY amd peptidase M4 YP_001474977.1 3939309 D 425104 CDS YP_001474978.1 157376378 5612784 3939689..3940384 1 NC_009831.1 KEGG: spc:Sputcn32_3852 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3940384 5612784 Ssed_3246 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001474978.1 3939689 D 425104 CDS YP_001474979.1 157376379 5612785 3940377..3941786 1 NC_009831.1 KEGG: pin:Ping_0281 sensor histidine kinase with ATPase domain; sensor histidine kinase 3941786 5612785 Ssed_3247 Shewanella sediminis HAW-EB3 sensor histidine kinase YP_001474979.1 3940377 D 425104 CDS YP_001474980.1 157376380 5612786 3941930..3943351 1 NC_009831.1 KEGG: slo:Shew_2697 hypothetical protein; hypothetical protein 3943351 5612786 Ssed_3248 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474980.1 3941930 D 425104 CDS YP_001474981.1 157376381 5613872 complement(3943486..3943998) 1 NC_009831.1 KEGG: she:Shewmr4_2687 hypothetical protein; hypothetical protein 3943998 5613872 Ssed_3249 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474981.1 3943486 R 425104 CDS YP_001474982.1 157376382 5613873 complement(3944091..3944663) 1 NC_009831.1 KEGG: she:Shewmr4_2688 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 3944663 5613873 Ssed_3250 Shewanella sediminis HAW-EB3 cyclic nucleotide-binding protein YP_001474982.1 3944091 R 425104 CDS YP_001474983.1 157376383 5613874 3944786..3946369 1 NC_009831.1 KEGG: vch:VC1585 catalase; catalase 3946369 5613874 Ssed_3251 Shewanella sediminis HAW-EB3 catalase YP_001474983.1 3944786 D 425104 CDS YP_001474984.1 157376384 5613875 3946790..3947164 1 NC_009831.1 KEGG: vvy:VVA0293 AnkB protein; AnkB protein 3947164 5613875 Ssed_3252 Shewanella sediminis HAW-EB3 AnkB protein YP_001474984.1 3946790 D 425104 CDS YP_001474985.1 157376385 5613719 complement(3947230..3947994) 1 NC_009831.1 KEGG: hch:HCH_05115 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter substrate-binding protein 3947994 5613719 Ssed_3253 Shewanella sediminis HAW-EB3 amino acid ABC transporter substrate-binding protein YP_001474985.1 3947230 R 425104 CDS YP_001474986.1 157376386 5613720 3948375..3949778 1 NC_009831.1 KEGG: pha:PSHAa1481 hypothetical protein; hypothetical protein 3949778 5613720 Ssed_3254 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474986.1 3948375 D 425104 CDS YP_001474987.1 157376387 5613721 3949993..3950508 1 NC_009831.1 KEGG: slo:Shew_1660 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3950508 5613721 Ssed_3255 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001474987.1 3949993 D 425104 CDS YP_001474988.1 157376388 5613722 complement(3950608..3952284) 1 NC_009831.1 KEGG: ilo:IL2343 methyl-accepting chemotaxis protein (contains HAMP domain); methyl-accepting chemotaxis protein 3952284 5613722 Ssed_3256 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001474988.1 3950608 R 425104 CDS YP_001474989.1 157376389 5614186 complement(3952313..3953209) 1 NC_009831.1 KEGG: pna:Pnap_1406 hypothetical protein; hypothetical protein 3953209 5614186 Ssed_3257 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474989.1 3952313 R 425104 CDS YP_001474990.1 157376390 5614187 complement(3953508..3955154) 1 NC_009831.1 KEGG: slo:Shew_3024 amidohydrolase 3; amidohydrolase 3 3955154 5614187 Ssed_3258 Shewanella sediminis HAW-EB3 amidohydrolase 3 YP_001474990.1 3953508 R 425104 CDS YP_001474991.1 157376391 5614188 complement(3955327..3956937) 1 NC_009831.1 KEGG: cch:Cag_1048 hypothetical protein; hypothetical protein 3956937 5614188 Ssed_3259 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474991.1 3955327 R 425104 CDS YP_001474992.1 157376392 5614189 complement(3957500..3958384) 1 NC_009831.1 KEGG: cps:CPS_4655 transcriptional regulator, AraC family; AraC family transcriptional regulator 3958384 5614189 Ssed_3260 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001474992.1 3957500 R 425104 CDS YP_001474993.1 157376393 5614142 complement(3958393..3960501) 1 NC_009831.1 KEGG: mag:amb3617 hypothetical protein YddU; diguanylate cyclase 3960501 5614142 Ssed_3261 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001474993.1 3958393 R 425104 CDS YP_001474994.1 157376394 5614143 complement(3960467..3961828) 1 NC_009831.1 KEGG: sus:Acid_7220 cytochrome c family protein; hypothetical protein 3961828 5614143 Ssed_3262 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474994.1 3960467 R 425104 CDS YP_001474995.1 157376395 5614144 complement(3962000..3962425) 1 NC_009831.1 hypothetical protein 3962425 5614144 Ssed_3263 Shewanella sediminis HAW-EB3 hypothetical protein YP_001474995.1 3962000 R 425104 CDS YP_001474996.1 157376396 5614145 3962654..3964324 1 NC_009831.1 KEGG: cps:CPS_2717 sulfatase; sulfatase 3964324 5614145 Ssed_3264 Shewanella sediminis HAW-EB3 sulfatase YP_001474996.1 3962654 D 425104 CDS YP_001474997.1 157376397 5613223 complement(3964436..3965134) 1 NC_009831.1 KEGG: ppr:PBPRB1023 hypothetical ribosomal small subunit pseudouridine synthase A; ribosomal small subunit pseudouridine synthase A 3965134 5613223 Ssed_3265 Shewanella sediminis HAW-EB3 ribosomal small subunit pseudouridine synthase A YP_001474997.1 3964436 R 425104 CDS YP_001474998.1 157376398 5613224 complement(3965260..3966879) 1 NC_009831.1 KEGG: pha:PSHAb0412 uncharacterized dehydrogenase; dehydrogenase 3966879 5613224 Ssed_3266 Shewanella sediminis HAW-EB3 dehydrogenase YP_001474998.1 3965260 R 425104 CDS YP_001474999.1 157376399 5613225 3967151..3967474 1 NC_009831.1 KEGG: pmy:Pmen_3019 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3967474 5613225 Ssed_3267 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001474999.1 3967151 D 425104 CDS YP_001475000.1 157376400 5614096 3967999..3968361 1 NC_009831.1 KEGG: slo:Shew_2700 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3968361 5614096 Ssed_3268 Shewanella sediminis HAW-EB3 antibiotic biosynthesis monooxygenase YP_001475000.1 3967999 D 425104 CDS YP_001475001.1 157376401 5614097 3968717..3970519 1 NC_009831.1 KEGG: gme:Gmet_0018 metal dependent phosphohydrolase; response regulator 3970519 5614097 Ssed_3269 Shewanella sediminis HAW-EB3 response regulator YP_001475001.1 3968717 D 425104 CDS YP_001475002.1 157376402 5614098 complement(3970549..3971091) 1 NC_009831.1 hypothetical protein 3971091 5614098 Ssed_3270 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475002.1 3970549 R 425104 CDS YP_001475003.1 157376403 5614099 3971382..3972086 1 NC_009831.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 3972086 5614099 Ssed_3271 Shewanella sediminis HAW-EB3 purine nucleoside phosphorylase YP_001475003.1 3971382 D 425104 CDS YP_001475004.1 157376404 5613676 3972230..3973408 1 NC_009831.1 KEGG: shn:Shewana3_2502 major facilitator superfamily MFS_1; hypothetical protein 3973408 5613676 Ssed_3272 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475004.1 3972230 D 425104 CDS YP_001475005.1 157376405 5613677 complement(3973739..3974455) 1 NC_009831.1 KEGG: son:SO2717 cyclic nucleotide binding protein; cyclic nucleotide binding protein 3974455 5613677 Ssed_3273 Shewanella sediminis HAW-EB3 cyclic nucleotide binding protein YP_001475005.1 3973739 R 425104 CDS YP_001475006.1 157376406 5613678 3974736..3975599 1 NC_009831.1 KEGG: cps:CPS_4656 lipoprotein; lipoprotein 3975599 5613678 Ssed_3274 Shewanella sediminis HAW-EB3 lipoprotein YP_001475006.1 3974736 D 425104 CDS YP_001475007.1 157376407 5613679 complement(3975777..3976559) 1 NC_009831.1 KEGG: son:SO3488 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator 3976559 5613679 Ssed_3275 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001475007.1 3975777 R 425104 CDS YP_001475008.1 157376408 5612703 3976661..3977818 1 NC_009831.1 KEGG: aha:AHA_0012 multidrug resistance protein D; multidrug resistance protein D 3977818 5612703 Ssed_3276 Shewanella sediminis HAW-EB3 multidrug resistance protein D YP_001475008.1 3976661 D 425104 CDS YP_001475009.1 157376409 5612704 complement(3977917..3978960) 1 NC_009831.1 hypothetical protein 3978960 5612704 Ssed_3277 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475009.1 3977917 R 425104 CDS YP_001475010.1 157376410 5612705 complement(3979642..3980466) 1 NC_009831.1 KEGG: sfr:Sfri_0868 hypothetical protein; hypothetical protein 3980466 5612705 Ssed_3278 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475010.1 3979642 R 425104 CDS YP_001475011.1 157376411 5612706 complement(3980623..3981882) 1 NC_009831.1 KEGG: cps:CPS_3064 lipoprotein; lipoprotein 3981882 5612706 Ssed_3279 Shewanella sediminis HAW-EB3 lipoprotein YP_001475011.1 3980623 R 425104 CDS YP_001475012.1 157376412 5610446 3982093..3982779 1 NC_009831.1 KEGG: cps:CPS_3065 DNA-binding response regulator; DNA-binding response regulator 3982779 5610446 Ssed_3280 Shewanella sediminis HAW-EB3 DNA-binding response regulator YP_001475012.1 3982093 D 425104 CDS YP_001475013.1 157376413 5610447 3982772..3984223 1 NC_009831.1 KEGG: cps:CPS_3066 sensor histidine kinase; sensor histidine kinase 3984223 5610447 Ssed_3281 Shewanella sediminis HAW-EB3 sensor histidine kinase YP_001475013.1 3982772 D 425104 CDS YP_001475014.1 157376414 5610448 complement(3984220..3984678) 1 NC_009831.1 KEGG: sbl:Sbal_1670 hypothetical protein; hypothetical protein 3984678 5610448 Ssed_3282 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475014.1 3984220 R 425104 CDS YP_001475015.1 157376415 5610449 3984893..3986182 1 NC_009831.1 KEGG: shw:Sputw3181_3244 O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine aminocarboxypropyltransferase 3986182 5610449 Ssed_3283 Shewanella sediminis HAW-EB3 O-acetylhomoserine aminocarboxypropyltransferase YP_001475015.1 3984893 D 425104 CDS YP_001475016.1 157376416 5610032 3986440..3988377 1 NC_009831.1 KEGG: sbl:Sbal_3681 diguanylate cyclase/phosphodiesterase with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase 3988377 5610032 Ssed_3284 Shewanella sediminis HAW-EB3 GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001475016.1 3986440 D 425104 CDS YP_001475017.1 157376417 5610033 complement(3988497..3989231) 1 NC_009831.1 KEGG: slo:Shew_2715 protein of unknown function DUF599; hypothetical protein 3989231 5610033 Ssed_3285 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475017.1 3988497 R 425104 CDS YP_001475018.1 157376418 5610034 3989985..3992129 1 NC_009831.1 KEGG: saz:Sama_1211 decaheme cytochrome c MtrF; hypothetical protein 3992129 5610034 Ssed_3286 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475018.1 3989985 D 425104 CDS YP_001475019.1 157376419 5610399 3992348..3993964 1 NC_009831.1 KEGG: slo:Shew_2716 peptidase S41; peptidase S41 3993964 5610399 Ssed_3287 Shewanella sediminis HAW-EB3 peptidase S41 YP_001475019.1 3992348 D 425104 CDS YP_001475020.1 157376420 5610400 3993988..3994368 1 NC_009831.1 KEGG: slo:Shew_2717 hypothetical protein; hypothetical protein 3994368 5610400 Ssed_3288 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475020.1 3993988 D 425104 CDS YP_001475021.1 157376421 5610401 3994612..3997599 1 NC_009831.1 KEGG: rme:Rmet_4552 curculin-like (mannose-binding) lectin; PKD repeat-containing protein 3997599 5610401 Ssed_3289 Shewanella sediminis HAW-EB3 PKD repeat-containing protein YP_001475021.1 3994612 D 425104 CDS YP_001475022.1 157376422 5610402 complement(3997753..3999579) 1 NC_009831.1 KEGG: slo:Shew_2720 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3999579 5610402 Ssed_3290 Shewanella sediminis HAW-EB3 peptidase S8/S53 subtilisin kexin sedolisin YP_001475022.1 3997753 R 425104 CDS YP_001475023.1 157376423 5611582 3999883..4000554 1 NC_009831.1 KEGG: slo:Shew_2727 hypothetical protein; hypothetical protein 4000554 5611582 Ssed_3291 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475023.1 3999883 D 425104 CDS YP_001475024.1 157376424 5611583 4000612..4001280 1 NC_009831.1 KEGG: ppr:PBPRB0681 glutathione S-transferase; glutathione S-transferase 4001280 5611583 Ssed_3292 Shewanella sediminis HAW-EB3 glutathione S-transferase YP_001475024.1 4000612 D 425104 CDS YP_001475025.1 157376425 5611584 4001551..4002342 1 NC_009831.1 KEGG: hch:HCH_03521 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic protein 4002342 5611584 Ssed_3293 Shewanella sediminis HAW-EB3 amino acid ABC transporter periplasmic protein YP_001475025.1 4001551 D 425104 CDS YP_001475026.1 157376426 5611585 complement(4002374..4003045) 1 NC_009831.1 KEGG: sat:SYN_02919 6-O-methylguanine DNA methyltransferase; 6-O-methylguanine DNA methyltransferase 4003045 5611585 Ssed_3294 Shewanella sediminis HAW-EB3 6-O-methylguanine DNA methyltransferase YP_001475026.1 4002374 R 425104 CDS YP_001475027.1 157376427 5612201 4003559..4004938 1 NC_009831.1 KEGG: shn:Shewana3_2867 Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein 4004938 5612201 Ssed_3295 Shewanella sediminis HAW-EB3 Fmu (Sun) domain-containing protein YP_001475027.1 4003559 D 425104 CDS YP_001475028.1 157376428 5612202 complement(4005437..4006960) 1 NC_009831.1 KEGG: sbl:Sbal_1389 diguanylate cyclase; diguanylate cyclase 4006960 5612202 Ssed_3296 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475028.1 4005437 R 425104 CDS YP_001475029.1 157376429 5612203 complement(4007391..4007930) 1 NC_009831.1 KEGG: slo:Shew_2740 YfaZ family protein; hypothetical protein 4007930 5612203 Ssed_3297 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475029.1 4007391 R 425104 CDS YP_001475030.1 157376430 5612204 4008210..4008695 1 NC_009831.1 KEGG: slo:Shew_2741 glutathione peroxidase; glutathione peroxidase 4008695 5612204 Ssed_3298 Shewanella sediminis HAW-EB3 glutathione peroxidase YP_001475030.1 4008210 D 425104 CDS YP_001475031.1 157376431 5610411 complement(4009301..4011094) 1 NC_009831.1 KEGG: slo:Shew_2742 peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 4011094 5610411 Ssed_3299 Shewanella sediminis HAW-EB3 peptidase M1, membrane alanine aminopeptidase YP_001475031.1 4009301 R 425104 CDS YP_001475032.1 157376432 5610412 4011249..4012133 1 NC_009831.1 KEGG: slo:Shew_2743 microbial collagenase; collagenase 4012133 5610412 Ssed_3300 Shewanella sediminis HAW-EB3 collagenase YP_001475032.1 4011249 D 425104 CDS YP_001475033.1 157376433 5610413 complement(4013851..4014822) 1 NC_009831.1 KEGG: slo:Shew_2747 phosphate binding protein; phosphate binding protein 4014822 5610413 Ssed_3301 Shewanella sediminis HAW-EB3 phosphate binding protein YP_001475033.1 4013851 R 425104 CDS YP_001475034.1 157376434 5610414 complement(4015060..4016379) 1 NC_009831.1 KEGG: shn:Shewana3_2878 PAS/PAC sensor protein; PAS/PAC sensor protein 4016379 5610414 Ssed_3302 Shewanella sediminis HAW-EB3 PAS/PAC sensor protein YP_001475034.1 4015060 R 425104 CDS YP_001475035.1 157376435 5614013 complement(4016475..4017164) 1 NC_009831.1 KEGG: slo:Shew_2749 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4017164 5614013 Ssed_3303 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001475035.1 4016475 R 425104 CDS YP_001475036.1 157376436 5614014 complement(4017411..4018355) 1 NC_009831.1 KEGG: slo:Shew_2750 porin, gram-negative type; porin 4018355 5614014 Ssed_3304 Shewanella sediminis HAW-EB3 porin YP_001475036.1 4017411 R 425104 CDS YP_001475037.1 157376437 5614015 4018390..4018665 1 NC_009831.1 hypothetical protein 4018665 5614015 Ssed_3305 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475037.1 4018390 D 425104 CDS YP_001475038.1 157376438 5610837 4018647..4019558 1 NC_009831.1 Required for efficient pilin antigenic variation; recombination associated protein 4019558 rdgC 5610837 rdgC Shewanella sediminis HAW-EB3 recombination associated protein YP_001475038.1 4018647 D 425104 CDS YP_001475039.1 157376439 5610838 complement(4019643..4021439) 1 NC_009831.1 KEGG: slo:Shew_2752 peptidase M61 domain protein; peptidase M61 domain-containing protein 4021439 5610838 Ssed_3307 Shewanella sediminis HAW-EB3 peptidase M61 domain-containing protein YP_001475039.1 4019643 R 425104 CDS YP_001475040.1 157376440 5610839 4021615..4023771 1 NC_009831.1 KEGG: slo:Shew_2753 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4023771 5610839 Ssed_3308 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475040.1 4021615 D 425104 CDS YP_001475041.1 157376441 5610840 4024096..4025640 1 NC_009831.1 KEGG: slo:Shew_2754 diguanylate cyclase; diguanylate cyclase 4025640 5610840 Ssed_3309 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475041.1 4024096 D 425104 CDS YP_001475042.1 157376442 5613569 4025750..4027102 1 NC_009831.1 KEGG: slo:Shew_2755 conserved hypothetical protein 730; hypothetical protein 4027102 5613569 Ssed_3310 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475042.1 4025750 D 425104 CDS YP_001475043.1 157376443 5613570 4027213..4027980 1 NC_009831.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 4027980 xni 5613570 xni Shewanella sediminis HAW-EB3 exonuclease IX YP_001475043.1 4027213 D 425104 CDS YP_001475044.1 157376444 5613571 4028140..4028553 1 NC_009831.1 KEGG: slo:Shew_2757 hypothetical protein; hypothetical protein 4028553 5613571 Ssed_3312 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475044.1 4028140 D 425104 CDS YP_001475045.1 157376445 5613572 4029004..4029531 1 NC_009831.1 hypothetical protein 4029531 5613572 Ssed_3313 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475045.1 4029004 D 425104 CDS YP_001475046.1 157376446 5614138 complement(4029964..4030563) 1 NC_009831.1 KEGG: aha:AHA_0849 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 4030563 5614138 Ssed_3314 Shewanella sediminis HAW-EB3 ribosomal-protein-alanine acetyltransferase YP_001475046.1 4029964 R 425104 CDS YP_001475047.1 157376447 5614139 complement(4030567..4031046) 1 NC_009831.1 KEGG: slo:Shew_2758 hypothetical protein; hypothetical protein 4031046 5614139 Ssed_3315 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475047.1 4030567 R 425104 CDS YP_001475048.1 157376448 5614140 complement(4031095..4031754) 1 NC_009831.1 KEGG: cte:CT0481 multiple antibiotic resistance protein; multiple antibiotic resistance protein 4031754 5614140 Ssed_3316 Shewanella sediminis HAW-EB3 multiple antibiotic resistance protein YP_001475048.1 4031095 R 425104 CDS YP_001475049.1 157376449 5614141 complement(4031879..4034752) 1 NC_009831.1 KEGG: slo:Shew_2759 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 4034752 5614141 Ssed_3317 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001475049.1 4031879 R 425104 CDS YP_001475050.1 157376450 5610480 4034985..4035992 1 NC_009831.1 catalyzes the formation of 2-oxoglutarate from isocitrate; isocitrate dehydrogenase 4035992 5610480 Ssed_3318 Shewanella sediminis HAW-EB3 isocitrate dehydrogenase YP_001475050.1 4034985 D 425104 CDS YP_001475051.1 157376451 5610481 complement(4036172..4037254) 1 NC_009831.1 KEGG: slo:Shew_2761 hypothetical protein; RNA 2'-O-ribose methyltransferase 4037254 5610481 Ssed_3319 Shewanella sediminis HAW-EB3 RNA 2'-O-ribose methyltransferase YP_001475051.1 4036172 R 425104 CDS YP_001475052.1 157376452 5610482 complement(4037465..4037854) 1 NC_009831.1 KEGG: slo:Shew_2762 protein of unknown function DUF423; hypothetical protein 4037854 5610482 Ssed_3320 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475052.1 4037465 R 425104 CDS YP_001475053.1 157376453 5610483 complement(4037847..4038521) 1 NC_009831.1 KEGG: slo:Shew_2763 dienelactone hydrolase; dienelactone hydrolase 4038521 5610483 Ssed_3321 Shewanella sediminis HAW-EB3 dienelactone hydrolase YP_001475053.1 4037847 R 425104 CDS YP_001475054.1 157376454 5610561 complement(4038502..4039413) 1 NC_009831.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 4039413 5610561 Ssed_3322 Shewanella sediminis HAW-EB3 DNA-binding transcriptional activator GcvA YP_001475054.1 4038502 R 425104 CDS YP_001475055.1 157376455 5610562 4039595..4039822 1 NC_009831.1 KEGG: slo:Shew_2765 hypothetical protein; hypothetical protein 4039822 5610562 Ssed_3323 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475055.1 4039595 D 425104 CDS YP_001475056.1 157376456 5610563 complement(4040090..4041544) 1 NC_009831.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 4041544 5610563 Ssed_3324 Shewanella sediminis HAW-EB3 thiamine biosynthesis protein ThiI YP_001475056.1 4040090 R 425104 CDS YP_001475057.1 157376457 5611171 complement(4041741..4042718) 1 NC_009831.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar motor protein MotB 4042718 motB 5611171 motB Shewanella sediminis HAW-EB3 flagellar motor protein MotB YP_001475057.1 4041741 R 425104 CDS YP_001475058.1 157376458 5611172 complement(4042723..4043490) 1 NC_009831.1 Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein PomA 4043490 5611172 Ssed_3326 Shewanella sediminis HAW-EB3 flagellar motor protein PomA YP_001475058.1 4042723 R 425104 CDS YP_001475059.1 157376459 5611173 4043925..4044164 1 NC_009831.1 KEGG: shw:Sputw3181_2829 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 4044164 5611173 Ssed_3327 Shewanella sediminis HAW-EB3 exodeoxyribonuclease VII small subunit YP_001475059.1 4043925 D 425104 CDS YP_001475060.1 157376460 5611174 4044165..4045046 1 NC_009831.1 KEGG: slo:Shew_2770 polyprenyl synthetase; polyprenyl synthetase 4045046 5611174 Ssed_3328 Shewanella sediminis HAW-EB3 polyprenyl synthetase YP_001475060.1 4044165 D 425104 CDS YP_001475061.1 157376461 5610276 4045067..4046932 1 NC_009831.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 4046932 5610276 Ssed_3329 Shewanella sediminis HAW-EB3 1-deoxy-D-xylulose-5-phosphate synthase YP_001475061.1 4045067 D 425104 CDS YP_001475062.1 157376462 5610277 complement(4047032..4047661) 1 NC_009831.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 4047661 5610277 Ssed_3330 Shewanella sediminis HAW-EB3 heat shock protein GrpE YP_001475062.1 4047032 R 425104 CDS YP_001475063.1 157376463 5610278 4047710..4048633 1 NC_009831.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 4048633 ppnK 5610278 ppnK Shewanella sediminis HAW-EB3 inorganic polyphosphate/ATP-NAD kinase YP_001475063.1 4047710 D 425104 CDS YP_001475064.1 157376464 5610279 complement(4048697..4049785) 1 NC_009831.1 KEGG: slo:Shew_2774 TonB family protein; TonB family protein 4049785 5610279 Ssed_3332 Shewanella sediminis HAW-EB3 TonB family protein YP_001475064.1 4048697 R 425104 CDS YP_001475065.1 157376465 5609607 complement(4049933..4051279) 1 NC_009831.1 KEGG: sbl:Sbal_1342 multi antimicrobial extrusion protein MatE; multi anti extrusion protein MatE 4051279 5609607 Ssed_3333 Shewanella sediminis HAW-EB3 multi anti extrusion protein MatE YP_001475065.1 4049933 R 425104 CDS YP_001475066.1 157376466 5609608 complement(4051333..4052388) 1 NC_009831.1 KEGG: sbl:Sbal_1338 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 4052388 5609608 Ssed_3334 Shewanella sediminis HAW-EB3 cobalamin synthesis protein, P47K YP_001475066.1 4051333 R 425104 CDS YP_001475067.1 157376467 5609609 4052708..4054099 1 NC_009831.1 KEGG: vpa:VPA0754 hypothetical protein; hypothetical protein 4054099 5609609 Ssed_3335 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475067.1 4052708 D 425104 CDS YP_001475068.1 157376468 5609610 complement(4054188..4055477) 1 NC_009831.1 KEGG: sbl:Sbal_1337 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4055477 5609610 Ssed_3336 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001475068.1 4054188 R 425104 CDS YP_001475069.1 157376469 5609794 complement(4055530..4058592) 1 NC_009831.1 KEGG: slo:Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 4058592 5609794 Ssed_3337 Shewanella sediminis HAW-EB3 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001475069.1 4055530 R 425104 CDS YP_001475070.1 157376470 5609795 4058895..4059677 1 NC_009831.1 KEGG: slo:Shew_2779 conserved hypothetical amino acid ABC transporter; amino acid ABC transporter 4059677 5609795 Ssed_3338 Shewanella sediminis HAW-EB3 amino acid ABC transporter YP_001475070.1 4058895 D 425104 CDS YP_001475071.1 157376471 5609796 4059809..4060255 1 NC_009831.1 KEGG: sbl:Sbal_3195 thioesterase superfamily protein; thioesterase superfamily protein 4060255 5609796 Ssed_3339 Shewanella sediminis HAW-EB3 thioesterase superfamily protein YP_001475071.1 4059809 D 425104 CDS YP_001475072.1 157376472 5609797 complement(4060294..4061796) 1 NC_009831.1 KEGG: slo:Shew_2781 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 4061796 5609797 Ssed_3340 Shewanella sediminis HAW-EB3 diguanylate cyclase/phosphodiesterase YP_001475072.1 4060294 R 425104 CDS YP_001475073.1 157376473 5612429 complement(4061866..4062708) 1 NC_009831.1 KEGG: slo:Shew_2782 signal transduction protein; signal transduction protein 4062708 5612429 Ssed_3341 Shewanella sediminis HAW-EB3 signal transduction protein YP_001475073.1 4061866 R 425104 CDS YP_001475074.1 157376474 5612430 4063001..4064386 1 NC_009831.1 KEGG: slo:Shew_2783 peptidase U32; peptidase U32 4064386 5612430 Ssed_3342 Shewanella sediminis HAW-EB3 peptidase U32 YP_001475074.1 4063001 D 425104 CDS YP_001475075.1 157376475 5612431 4064404..4064661 1 NC_009831.1 KEGG: slo:Shew_2785 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4064661 5612431 Ssed_3343 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475075.1 4064404 D 425104 CDS YP_001475076.1 157376476 5612432 complement(4064838..4068005) 1 NC_009831.1 KEGG: aeh:Mlg_0074 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); signal transduction protein 4068005 5612432 Ssed_3344 Shewanella sediminis HAW-EB3 signal transduction protein YP_001475076.1 4064838 R 425104 CDS YP_001475077.1 157376477 5612111 4068360..4068719 1 NC_009831.1 hypothetical protein 4068719 5612111 Ssed_3345 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475077.1 4068360 D 425104 CDS YP_001475078.1 157376478 5612112 complement(4068820..4070073) 1 NC_009831.1 KEGG: cps:CPS_0081 response regulator/GGDEF domain protein; response regulator/GGDEF domain-containing protein 4070073 5612112 Ssed_3346 Shewanella sediminis HAW-EB3 response regulator/GGDEF domain-containing protein YP_001475078.1 4068820 R 425104 CDS YP_001475079.1 157376479 5612113 complement(4070227..4071936) 1 NC_009831.1 KEGG: rfr:Rfer_0062 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase 4071936 5612113 Ssed_3347 Shewanella sediminis HAW-EB3 acyl-CoA dehydrogenase YP_001475079.1 4070227 R 425104 CDS YP_001475080.1 157376480 5610391 complement(4072297..4074063) 1 NC_009831.1 KEGG: rme:Rmet_1541 formyl transferase-like protein; formyl transferase-like protein 4074063 5610391 Ssed_3348 Shewanella sediminis HAW-EB3 formyl transferase-like protein YP_001475080.1 4072297 R 425104 CDS YP_001475081.1 157376481 5610392 complement(4074147..4074659) 1 NC_009831.1 KEGG: son:SO1250 hypothetical protein; hypothetical protein 4074659 5610392 Ssed_3349 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475081.1 4074147 R 425104 CDS YP_001475082.1 157376482 5610393 4074834..4075835 1 NC_009831.1 KEGG: shm:Shewmr7_1133 peptidase U32; peptidase U32 4075835 5610393 Ssed_3350 Shewanella sediminis HAW-EB3 peptidase U32 YP_001475082.1 4074834 D 425104 CDS YP_001475083.1 157376483 5610394 4075867..4076727 1 NC_009831.1 KEGG: she:Shewmr4_1060 peptidase U32; peptidase U32 4076727 5610394 Ssed_3351 Shewanella sediminis HAW-EB3 peptidase U32 YP_001475083.1 4075867 D 425104 CDS YP_001475084.1 157376484 5614225 complement(4076755..4077483) 1 NC_009831.1 KEGG: sbl:Sbal_3204 hypothetical protein; hypothetical protein 4077483 5614225 Ssed_3352 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475084.1 4076755 R 425104 CDS YP_001475085.1 157376485 5614226 4077966..4079351 1 NC_009831.1 KEGG: slo:Shew_2790 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 4079351 5614226 Ssed_3353 Shewanella sediminis HAW-EB3 nucleoside recognition domain-containing protein YP_001475085.1 4077966 D 425104 CDS YP_001475086.1 157376486 5614227 4079501..4083229 1 NC_009831.1 KEGG: slo:Shew_2791 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 4083229 5614227 Ssed_3354 Shewanella sediminis HAW-EB3 PAS/PAC sensor signal transduction histidine kinase YP_001475086.1 4079501 D 425104 CDS YP_001475087.1 157376487 5614228 4083328..4083732 1 NC_009831.1 KEGG: slo:Shew_2794 CBS domain containing protein; hypothetical protein 4083732 5614228 Ssed_3355 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475087.1 4083328 D 425104 CDS YP_001475088.1 157376488 5609828 complement(4083762..4085192) 1 NC_009831.1 KEGG: slo:Shew_2795 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4085192 5609828 Ssed_3356 Shewanella sediminis HAW-EB3 xanthine/uracil/vitamin C permease YP_001475088.1 4083762 R 425104 CDS YP_001475089.1 157376489 5609829 complement(4085535..4086002) 1 NC_009831.1 hypothetical protein 4086002 5609829 Ssed_3357 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475089.1 4085535 R 425104 CDS YP_001475090.1 157376490 5609830 4086215..4086385 1 NC_009831.1 KEGG: slo:Shew_2796 periplasmic nitrate reductase NapE; periplasmic nitrate reductase NapE 4086385 5609830 Ssed_3358 Shewanella sediminis HAW-EB3 periplasmic nitrate reductase NapE YP_001475090.1 4086215 D 425104 CDS YP_001475091.1 157376491 5609831 4086441..4087619 1 NC_009831.1 KEGG: slo:Shew_2797 trimethylamine-N-oxide reductase C-type cytochrome TorC; trimethylamine-N-oxide reductase C-type cytochrome TorC 4087619 5609831 Ssed_3359 Shewanella sediminis HAW-EB3 trimethylamine-N-oxide reductase C-type cytochrome TorC YP_001475091.1 4086441 D 425104 CDS YP_001475092.1 157376492 5609735 4087725..4090217 1 NC_009831.1 KEGG: sfr:Sfri_1994 trimethylamine-N-oxide reductase TorA; trimethylamine-N-oxide reductase TorA 4090217 5609735 Ssed_3360 Shewanella sediminis HAW-EB3 trimethylamine-N-oxide reductase TorA YP_001475092.1 4087725 D 425104 CDS YP_001475093.1 157376493 5609736 4090214..4090861 1 NC_009831.1 TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; chaperone protein TorD 4090861 torD 5609736 torD Shewanella sediminis HAW-EB3 chaperone protein TorD YP_001475093.1 4090214 D 425104 CDS YP_001475094.1 157376494 5609737 complement(4090978..4091229) 1 NC_009831.1 KEGG: sfr:Sfri_2393 hypothetical protein; hypothetical protein 4091229 5609737 Ssed_3362 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475094.1 4090978 R 425104 CDS YP_001475095.1 157376495 5609738 4091601..4093223 1 NC_009831.1 KEGG: eba:ebA1004 probable di-heme cytochrome c; hypothetical protein 4093223 5609738 Ssed_3363 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475095.1 4091601 D 425104 CDS YP_001475096.1 157376496 5610080 complement(4093411..4094670) 1 NC_009831.1 KEGG: sbl:Sbal_1252 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4094670 5610080 Ssed_3364 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001475096.1 4093411 R 425104 CDS YP_001475097.1 157376497 5610081 complement(4094802..4097831) 1 NC_009831.1 KEGG: sfr:Sfri_1992 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 4097831 5610081 Ssed_3365 Shewanella sediminis HAW-EB3 multi-sensor hybrid histidine kinase YP_001475097.1 4094802 R 425104 CDS YP_001475098.1 157376498 5610082 4097982..4099109 1 NC_009831.1 periplasmic sensory protein associated with the TorRS two-component regulatory system; TMAO reductase system periplasmic protein TorT 4099109 5610082 Ssed_3366 Shewanella sediminis HAW-EB3 TMAO reductase system periplasmic protein TorT YP_001475098.1 4097982 D 425104 CDS YP_001475099.1 157376499 5610083 complement(4099332..4100042) 1 NC_009831.1 response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes; DNA-binding transcriptional regulator TorR 4100042 5610083 Ssed_3367 Shewanella sediminis HAW-EB3 DNA-binding transcriptional regulator TorR YP_001475099.1 4099332 R 425104 CDS YP_001475100.1 157376500 5609732 4100284..4100655 1 NC_009831.1 KEGG: slo:Shew_2804 type IV pilus assembly PilZ; type IV pilus assembly PilZ 4100655 5609732 Ssed_3368 Shewanella sediminis HAW-EB3 type IV pilus assembly PilZ YP_001475100.1 4100284 D 425104 CDS YP_001475101.1 157376501 5609733 complement(4101084..4103252) 1 NC_009831.1 KEGG: slo:Shew_1752 proprotein convertase, P; hypothetical protein 4103252 5609733 Ssed_3369 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475101.1 4101084 R 425104 CDS YP_001475102.1 157376502 5609734 complement(4103992..4105365) 1 NC_009831.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 4105365 5609734 Ssed_3370 Shewanella sediminis HAW-EB3 DNA repair protein RadA YP_001475102.1 4103992 R 425104 CDS YP_001475103.1 157376503 5609591 4105700..4108114 1 NC_009831.1 KEGG: slo:Shew_2808 type IV pilus assembly PilZ; type IV pilus assembly PilZ 4108114 5609591 Ssed_3371 Shewanella sediminis HAW-EB3 type IV pilus assembly PilZ YP_001475103.1 4105700 D 425104 CDS YP_001475104.1 157376504 5609592 complement(4108196..4109140) 1 NC_009831.1 KEGG: slo:Shew_2809 alpha/beta hydrolase fold; alpha/beta hydrolase 4109140 5609592 Ssed_3372 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001475104.1 4108196 R 425104 CDS YP_001475105.1 157376505 5609593 complement(4109371..4110363) 1 NC_009831.1 KEGG: slo:Shew_2810 phosphoserine phosphatase SerB; phosphoserine phosphatase 4110363 5609593 Ssed_3373 Shewanella sediminis HAW-EB3 phosphoserine phosphatase YP_001475105.1 4109371 R 425104 CDS YP_001475106.1 157376506 5609594 4110441..4111187 1 NC_009831.1 KEGG: slo:Shew_2811 membrane protein; membrane protein 4111187 5609594 Ssed_3374 Shewanella sediminis HAW-EB3 membrane protein YP_001475106.1 4110441 D 425104 CDS YP_001475107.1 157376507 5609953 complement(4111366..4112076) 1 NC_009831.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 4112076 deoD 5609953 deoD Shewanella sediminis HAW-EB3 purine nucleoside phosphorylase YP_001475107.1 4111366 R 425104 CDS YP_001475108.1 157376508 5609954 complement(4112226..4113443) 1 NC_009831.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 4113443 5609954 Ssed_3376 Shewanella sediminis HAW-EB3 phosphopentomutase YP_001475108.1 4112226 R 425104 CDS YP_001475109.1 157376509 5609955 complement(4113457..4114788) 1 NC_009831.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 4114788 deoA 5609955 deoA Shewanella sediminis HAW-EB3 thymidine phosphorylase YP_001475109.1 4113457 R 425104 CDS YP_001475110.1 157376510 5609956 complement(4114973..4115746) 1 NC_009831.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 4115746 5609956 Ssed_3378 Shewanella sediminis HAW-EB3 deoxyribose-phosphate aldolase YP_001475110.1 4114973 R 425104 CDS YP_001475111.1 157376511 5609928 complement(4116224..4117060) 1 NC_009831.1 KEGG: slo:Shew_2816 nucleoside-specific channel-forming protein, Tsx; nucleoside-specific channel-forming protein, Tsx 4117060 5609928 Ssed_3379 Shewanella sediminis HAW-EB3 nucleoside-specific channel-forming protein, Tsx YP_001475111.1 4116224 R 425104 CDS YP_001475112.1 157376512 5609929 complement(4117453..4118712) 1 NC_009831.1 KEGG: shw:Sputw3181_1187 nucleoside transporter; nucleoside transporter 4118712 5609929 Ssed_3380 Shewanella sediminis HAW-EB3 nucleoside transporter YP_001475112.1 4117453 R 425104 CDS YP_001475113.1 157376513 5609930 complement(4118890..4119726) 1 NC_009831.1 KEGG: saz:Sama_0970 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 4119726 5609930 Ssed_3381 Shewanella sediminis HAW-EB3 TatD-related deoxyribonuclease YP_001475113.1 4118890 R 425104 CDS YP_001475114.1 157376514 5609931 complement(4120066..4121646) 1 NC_009831.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 4121646 prfC 5609931 prfC Shewanella sediminis HAW-EB3 peptide chain release factor 3 YP_001475114.1 4120066 R 425104 CDS YP_001475115.1 157376515 5610352 complement(4121933..4122841) 1 NC_009831.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 4122841 5610352 Ssed_3383 Shewanella sediminis HAW-EB3 lipoprotein NlpI YP_001475115.1 4121933 R 425104 CDS YP_001475116.1 157376516 5610353 complement(4123013..4125127) 1 NC_009831.1 KEGG: slo:Shew_2822 polyribonucleotide nucleotidyltransferase; polynucleotide phosphorylase 4125127 5610353 Ssed_3384 Shewanella sediminis HAW-EB3 polynucleotide phosphorylase YP_001475116.1 4123013 R 425104 CDS YP_001475117.1 157376517 5610354 4125316..4127349 1 NC_009831.1 KEGG: slo:Shew_2823 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 4127349 5610354 Ssed_3385 Shewanella sediminis HAW-EB3 diguanylate cyclase/phosphodiesterase YP_001475117.1 4125316 D 425104 CDS YP_001475118.1 157376518 5610355 complement(4127810..4128079) 1 NC_009831.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 4128079 rpsO 5610355 rpsO Shewanella sediminis HAW-EB3 30S ribosomal protein S15 YP_001475118.1 4127810 R 425104 CDS YP_001475119.1 157376519 5610144 complement(4128231..4129196) 1 NC_009831.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 4129196 truB 5610144 truB Shewanella sediminis HAW-EB3 tRNA pseudouridine synthase B YP_001475119.1 4128231 R 425104 CDS YP_001475120.1 157376520 5610145 complement(4129196..4129627) 1 NC_009831.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 4129627 rbfA 5610145 rbfA Shewanella sediminis HAW-EB3 ribosome-binding factor A YP_001475120.1 4129196 R 425104 CDS YP_001475121.1 157376521 5610146 complement(4129716..4132406) 1 NC_009831.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 4132406 infB 5610146 infB Shewanella sediminis HAW-EB3 translation initiation factor IF-2 YP_001475121.1 4129716 R 425104 CDS YP_001475122.1 157376522 5610147 complement(4132433..4133932) 1 NC_009831.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 4133932 nusA 5610147 nusA Shewanella sediminis HAW-EB3 transcription elongation factor NusA YP_001475122.1 4132433 R 425104 CDS YP_001475123.1 157376523 5610090 complement(4133961..4134479) 1 NC_009831.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 4134479 5610090 Ssed_3391 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475123.1 4133961 R 425104 CDS YP_001475124.1 157376524 5611255 complement(4134956..4135303) 1 NC_009831.1 KEGG: slo:Shew_2830 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 4135303 secG 5611255 secG Shewanella sediminis HAW-EB3 preprotein translocase subunit SecG YP_001475124.1 4134956 R 425104 CDS YP_001475125.1 157376525 5610092 complement(4135305..4136087) 1 NC_009831.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 4136087 5610092 Ssed_3393 Shewanella sediminis HAW-EB3 triosephosphate isomerase YP_001475125.1 4135305 R 425104 CDS YP_001475126.1 157376526 5610346 complement(4136297..4137628) 1 NC_009831.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 4137628 glmM 5610346 glmM Shewanella sediminis HAW-EB3 phosphoglucosamine mutase YP_001475126.1 4136297 R 425104 CDS YP_001475127.1 157376527 5610347 complement(4138066..4138908) 1 NC_009831.1 KEGG: shn:Shewana3_1024 dihydropteroate synthase; dihydropteroate synthase 4138908 5610347 Ssed_3395 Shewanella sediminis HAW-EB3 dihydropteroate synthase YP_001475127.1 4138066 R 425104 CDS YP_001475128.1 157376528 5610348 complement(4139044..4141023) 1 NC_009831.1 KEGG: slo:Shew_2834 ATP-dependent metalloprotease FtsH; microtubule-severing ATPase 4141023 5610348 Ssed_3396 Shewanella sediminis HAW-EB3 microtubule-severing ATPase YP_001475128.1 4139044 R 425104 CDS YP_001475129.1 157376529 5610349 complement(4141069..4141698) 1 NC_009831.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase 4141698 rrmJ 5610349 rrmJ Shewanella sediminis HAW-EB3 23S rRNA methyltransferase YP_001475129.1 4141069 R 425104 CDS YP_001475130.1 157376530 5609696 4141790..4142089 1 NC_009831.1 KEGG: slo:Shew_2836 protein of unknown function UPF0044; hypothetical protein 4142089 5609696 Ssed_3398 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475130.1 4141790 D 425104 CDS YP_001475131.1 157376531 5609697 complement(4142302..4143228) 1 NC_009831.1 KEGG: sbl:Sbal_3249 protein-export membrane protein SecF; protein-export membrane protein SecF 4143228 5609697 Ssed_3399 Shewanella sediminis HAW-EB3 protein-export membrane protein SecF YP_001475131.1 4142302 R 425104 CDS YP_001475132.1 157376532 5609698 complement(4143230..4145044) 1 NC_009831.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 4145044 secD 5609698 secD Shewanella sediminis HAW-EB3 preprotein translocase subunit SecD YP_001475132.1 4143230 R 425104 CDS YP_001475133.1 157376533 5609699 complement(4145194..4145754) 1 NC_009831.1 KEGG: sfr:Sfri_0978 hypothetical protein; hypothetical protein 4145754 5609699 Ssed_3401 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475133.1 4145194 R 425104 CDS YP_001475134.1 157376534 5609603 complement(4145847..4146308) 1 NC_009831.1 KEGG: shn:Shewana3_1017 transcription elongation factor GreA; transcription elongation factor GreA 4146308 5609603 Ssed_3402 Shewanella sediminis HAW-EB3 transcription elongation factor GreA YP_001475134.1 4145847 R 425104 CDS YP_001475135.1 157376535 5609604 complement(4146731..4149949) 1 NC_009831.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 4149949 carB 5609604 carB Shewanella sediminis HAW-EB3 carbamoyl phosphate synthase large subunit YP_001475135.1 4146731 R 425104 CDS YP_001475136.1 157376536 5609605 complement(4149970..4151127) 1 NC_009831.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 4151127 5609605 Ssed_3404 Shewanella sediminis HAW-EB3 carbamoyl phosphate synthase small subunit YP_001475136.1 4149970 R 425104 CDS YP_001475137.1 157376537 5609606 complement(4151305..4152120) 1 NC_009831.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 4152120 5609606 Ssed_3405 Shewanella sediminis HAW-EB3 dihydrodipicolinate reductase YP_001475137.1 4151305 R 425104 CDS YP_001475138.1 157376538 5609759 complement(4152232..4152849) 1 NC_009831.1 KEGG: slo:Shew_2841 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 4152849 5609759 Ssed_3406 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001475138.1 4152232 R 425104 CDS YP_001475139.1 157376539 5609760 complement(4152932..4153732) 1 NC_009831.1 KEGG: slo:Shew_2842 peptidase M48, Ste24p; peptidase M48, Ste24p 4153732 5609760 Ssed_3407 Shewanella sediminis HAW-EB3 peptidase M48, Ste24p YP_001475139.1 4152932 R 425104 CDS YP_001475140.1 157376540 5609761 complement(4154037..4155173) 1 NC_009831.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 4155173 5609761 Ssed_3408 Shewanella sediminis HAW-EB3 molecular chaperone DnaJ YP_001475140.1 4154037 R 425104 CDS YP_001475141.1 157376541 5609762 complement(4155301..4157223) 1 NC_009831.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 4157223 dnaK 5609762 dnaK Shewanella sediminis HAW-EB3 molecular chaperone DnaK YP_001475141.1 4155301 R 425104 CDS YP_001475142.1 157376542 5610754 4157570..4158493 1 NC_009831.1 KEGG: slo:Shew_2845 protein of unknown function DUF6, transmembrane; hypothetical protein 4158493 5610754 Ssed_3410 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475142.1 4157570 D 425104 CDS YP_001475143.1 157376543 5610755 complement(4158563..4159228) 1 NC_009831.1 KEGG: slo:Shew_2846 hypothetical protein; hypothetical protein 4159228 5610755 Ssed_3411 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475143.1 4158563 R 425104 CDS YP_001475144.1 157376544 5610756 complement(4159768..4161840) 1 NC_009831.1 KEGG: slo:Shew_0490 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 4161840 5610756 Ssed_3412 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001475144.1 4159768 R 425104 CDS YP_001475145.1 157376545 5610757 4162351..4162665 1 NC_009831.1 hypothetical protein 4162665 5610757 Ssed_3413 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475145.1 4162351 D 425104 CDS YP_001475146.1 157376546 5610751 complement(4162737..4163555) 1 NC_009831.1 KEGG: sdn:Sden_0822 beta-lactamase; beta-lactamase 4163555 5610751 Ssed_3414 Shewanella sediminis HAW-EB3 beta-lactamase YP_001475146.1 4162737 R 425104 CDS YP_001475147.1 157376547 5610752 complement(4163613..4164887) 1 NC_009831.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 4164887 proA 5610752 proA Shewanella sediminis HAW-EB3 gamma-glutamyl phosphate reductase YP_001475147.1 4163613 R 425104 CDS YP_001475148.1 157376548 5610753 complement(4164945..4166063) 1 NC_009831.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 4166063 5610753 Ssed_3416 Shewanella sediminis HAW-EB3 gamma-glutamyl kinase YP_001475148.1 4164945 R 425104 CDS YP_001475149.1 157376549 5610689 complement(4166222..4167511) 1 NC_009831.1 KEGG: slo:Shew_2849 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4167511 5610689 Ssed_3417 Shewanella sediminis HAW-EB3 xanthine/uracil/vitamin C permease YP_001475149.1 4166222 R 425104 CDS YP_001475150.1 157376550 5610690 complement(4167867..4167965) 1 NC_009831.1 KEGG: slo:Shew_2850 hypothetical protein; hypothetical protein 4167965 5610690 Ssed_3418 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475150.1 4167867 R 425104 CDS YP_001475151.1 157376551 5610691 complement(4169328..4169426) 1 NC_009831.1 KEGG: slo:Shew_2850 hypothetical protein; hypothetical protein 4169426 5610691 Ssed_3419 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475151.1 4169328 R 425104 CDS YP_001475152.1 157376552 5610692 complement(4169868..4171403) 1 NC_009831.1 KEGG: she:Shewmr4_0949 peptidase M17, leucyl aminopeptidase domain protein; peptidase M17, leucyl aminopeptidase domain-containing protein 4171403 5610692 Ssed_3420 Shewanella sediminis HAW-EB3 peptidase M17, leucyl aminopeptidase domain-containing protein YP_001475152.1 4169868 R 425104 CDS YP_001475153.1 157376553 5610720 4171733..4173193 1 NC_009831.1 KEGG: slo:Shew_2852 aminoacyl-histidine dipeptidase; Xaa-His dipeptidase 4173193 5610720 Ssed_3421 Shewanella sediminis HAW-EB3 Xaa-His dipeptidase YP_001475153.1 4171733 D 425104 CDS YP_001475154.1 157376554 5610721 complement(4173238..4174320) 1 NC_009831.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 4174320 5610721 Ssed_3422 Shewanella sediminis HAW-EB3 DNA polymerase IV YP_001475154.1 4173238 R 425104 CDS YP_001475155.1 157376555 5610722 complement(4174505..4175482) 1 NC_009831.1 KEGG: saz:Sama_2531 GGDEF domain-like protein; diguanylate cyclase 4175482 5610722 Ssed_3423 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475155.1 4174505 R 425104 CDS YP_001475156.1 157376556 5610723 complement(4175621..4175842) 1 NC_009831.1 KEGG: slo:Shew_2874 protein of unknown function DUF539; hypothetical protein 4175842 5610723 Ssed_3424 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475156.1 4175621 R 425104 CDS YP_001475157.1 157376557 5613576 complement(4175902..4176918) 1 NC_009831.1 KEGG: slo:Shew_2875 ApbE family lipoprotein; ApbE family lipoprotein 4176918 5613576 Ssed_3425 Shewanella sediminis HAW-EB3 ApbE family lipoprotein YP_001475157.1 4175902 R 425104 CDS YP_001475158.1 157376558 5613577 complement(4177064..4178311) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 4178311 5613577 Ssed_3426 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit F YP_001475158.1 4177064 R 425104 CDS YP_001475159.1 157376559 5613578 complement(4178357..4178965) 1 NC_009831.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 4178965 5613578 Ssed_3427 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit E YP_001475159.1 4178357 R 425104 CDS YP_001475160.1 157376560 5613579 complement(4178971..4179603) 1 NC_009831.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 4179603 5613579 Ssed_3428 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit D YP_001475160.1 4178971 R 425104 CDS YP_001475161.1 157376561 5610439 complement(4179603..4180397) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 4180397 5610439 Ssed_3429 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit C YP_001475161.1 4179603 R 425104 CDS YP_001475162.1 157376562 5610440 complement(4180390..4181589) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 4181589 5610440 Ssed_3430 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit B YP_001475162.1 4180390 R 425104 CDS YP_001475163.1 157376563 5610441 complement(4181589..4182923) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 4182923 5610441 Ssed_3431 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit A YP_001475163.1 4181589 R 425104 CDS YP_001475164.1 157376564 5610442 complement(4183473..4183982) 1 NC_009831.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 4183982 5610442 Ssed_3432 Shewanella sediminis HAW-EB3 S-ribosylhomocysteinase YP_001475164.1 4183473 R 425104 CDS YP_001475165.1 157376565 5613525 complement(4184384..4184683) 1 NC_009831.1 KEGG: slo:Shew_2883 BolA family protein; BolA family protein 4184683 5613525 Ssed_3433 Shewanella sediminis HAW-EB3 BolA family protein YP_001475165.1 4184384 R 425104 CDS YP_001475166.1 157376566 5613526 complement(4184895..4185398) 1 NC_009831.1 KEGG: slo:Shew_2884 glycine cleavage system regulatory protein-like protein; glycine cleavage system regulatory protein-like protein 4185398 5613526 Ssed_3434 Shewanella sediminis HAW-EB3 glycine cleavage system regulatory protein-like protein YP_001475166.1 4184895 R 425104 CDS YP_001475167.1 157376567 5613527 complement(4185545..4186240) 1 NC_009831.1 KEGG: shw:Sputw3181_3241 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 4186240 5613527 Ssed_3435 Shewanella sediminis HAW-EB3 2OG-Fe(II) oxygenase YP_001475167.1 4185545 R 425104 CDS YP_001475168.1 157376568 5613528 4186304..4187542 1 NC_009831.1 KEGG: she:Shewmr4_0930 rRNA (guanine-N(2)-)-methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 4187542 5613528 Ssed_3436 Shewanella sediminis HAW-EB3 rRNA (guanine-N(2)-)-methyltransferase YP_001475168.1 4186304 D 425104 CDS YP_001475169.1 157376569 5611564 complement(4187709..4188272) 1 NC_009831.1 KEGG: sbl:Sbal_0715 OmpA-like transmembrane domain protein; OmpA-like transmembrane domain-containing protein 4188272 5611564 Ssed_3437 Shewanella sediminis HAW-EB3 OmpA-like transmembrane domain-containing protein YP_001475169.1 4187709 R 425104 CDS YP_001475170.1 157376570 5611565 complement(4188587..4189654) 1 NC_009831.1 KEGG: slo:Shew_2888 hypothetical protein; hypothetical protein 4189654 5611565 Ssed_3438 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475170.1 4188587 R 425104 CDS YP_001475171.1 157376571 5611566 4189904..4190470 1 NC_009831.1 KEGG: slo:Shew_2889 uncharacterized lipoprotein; lipoprotein 4190470 5611566 Ssed_3439 Shewanella sediminis HAW-EB3 lipoprotein YP_001475171.1 4189904 D 425104 CDS YP_001475172.1 157376572 5609905 4190528..4191112 1 NC_009831.1 KEGG: shw:Sputw3181_3352 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 4191112 5609905 Ssed_3440 Shewanella sediminis HAW-EB3 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001475172.1 4190528 D 425104 CDS YP_001475173.1 157376573 5609906 4191197..4191523 1 NC_009831.1 KEGG: slo:Shew_2891 hypothetical protein; hypothetical protein 4191523 5609906 Ssed_3441 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475173.1 4191197 D 425104 CDS YP_001475174.1 157376574 5609907 4191685..4193121 1 NC_009831.1 KEGG: spc:Sputcn32_0819 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4193121 5609907 Ssed_3442 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001475174.1 4191685 D 425104 CDS YP_001475175.1 157376575 5609908 complement(4193198..4193683) 1 NC_009831.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 4193683 5609908 Ssed_3443 Shewanella sediminis HAW-EB3 nucleotide-binding protein YP_001475175.1 4193198 R 425104 CDS YP_001475176.1 157376576 5610923 4193786..4194226 1 NC_009831.1 KEGG: shw:Sputw3181_3356 VanZ family protein; VanZ family protein 4194226 5610923 Ssed_3444 Shewanella sediminis HAW-EB3 VanZ family protein YP_001475176.1 4193786 D 425104 CDS YP_001475177.1 157376577 5610924 4194258..4195190 1 NC_009831.1 KEGG: she:Shewmr4_3158 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 4195190 5610924 Ssed_3445 Shewanella sediminis HAW-EB3 2-dehydropantoate 2-reductase YP_001475177.1 4194258 D 425104 CDS YP_001475178.1 157376578 5610925 4195405..4196892 1 NC_009831.1 KEGG: ppr:PBPRA1510 sodium-dependent transporter; sodium-dependent transporter 4196892 5610925 Ssed_3446 Shewanella sediminis HAW-EB3 sodium-dependent transporter YP_001475178.1 4195405 D 425104 CDS YP_001475179.1 157376579 5610926 4197198..4197854 1 NC_009831.1 KEGG: slo:Shew_2901 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 4197854 5610926 Ssed_3447 Shewanella sediminis HAW-EB3 PA-phosphatase-like phosphoesterase YP_001475179.1 4197198 D 425104 CDS YP_001475180.1 157376580 5610731 complement(4197921..4198793) 1 NC_009831.1 KEGG: sfr:Sfri_0729 hypothetical protein; hypothetical protein 4198793 5610731 Ssed_3448 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475180.1 4197921 R 425104 CDS YP_001475181.1 157376581 5610732 complement(4198979..4200517) 1 NC_009831.1 KEGG: saz:Sama_3423 transporter; transporter 4200517 5610732 Ssed_3449 Shewanella sediminis HAW-EB3 transporter YP_001475181.1 4198979 R 425104 CDS YP_001475182.1 157376582 5610733 complement(4200701..4201549) 1 NC_009831.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 4201549 5610733 Ssed_3450 Shewanella sediminis HAW-EB3 2-dehydro-3-deoxyphosphooctonate aldolase YP_001475182.1 4200701 R 425104 CDS YP_001475183.1 157376583 5610734 complement(4201704..4202957) 1 NC_009831.1 KEGG: slo:Shew_2905 protein of unknown function DUF819; hypothetical protein 4202957 5610734 Ssed_3451 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475183.1 4201704 R 425104 CDS YP_001475184.1 157376584 5613555 complement(4203303..4204091) 1 NC_009831.1 KEGG: slo:Shew_2906 hypothetical protein; hypothetical protein 4204091 5613555 Ssed_3452 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475184.1 4203303 R 425104 CDS YP_001475185.1 157376585 5613556 complement(4204091..4204486) 1 NC_009831.1 KEGG: shw:Sputw3181_3368 invasion gene expression up-regulator, SirB; invasion gene expression up-regulator, SirB 4204486 5613556 Ssed_3453 Shewanella sediminis HAW-EB3 invasion gene expression up-regulator, SirB YP_001475185.1 4204091 R 425104 CDS YP_001475186.1 157376586 5613557 complement(4204635..4205630) 1 NC_009831.1 KEGG: slo:Shew_2908 transcriptional regulator, LysR family; LysR family transcriptional regulator 4205630 5613557 Ssed_3454 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475186.1 4204635 R 425104 CDS YP_001475187.1 157376587 5613558 4205676..4206131 1 NC_009831.1 KEGG: slo:Shew_2909 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4206131 5613558 Ssed_3455 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001475187.1 4205676 D 425104 CDS YP_001475188.1 157376588 5613723 complement(4206128..4207315) 1 NC_009831.1 KEGG: spc:Sputcn32_0533 flagellar biosynthesis protein; flagellar biosynthesis protein 4207315 5613723 Ssed_3456 Shewanella sediminis HAW-EB3 flagellar biosynthesis protein YP_001475188.1 4206128 R 425104 CDS YP_001475189.1 157376589 5613724 complement(4207715..4208092) 1 NC_009831.1 hypothetical protein 4208092 5613724 Ssed_3457 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475189.1 4207715 R 425104 CDS YP_001475190.1 157376590 5613725 complement(4209180..4210022) 1 NC_009831.1 KEGG: slo:Shew_2911 modification methylase, HemK family; HemK family modification methylase 4210022 5613725 Ssed_3458 Shewanella sediminis HAW-EB3 HemK family modification methylase YP_001475190.1 4209180 R 425104 CDS YP_001475191.1 157376591 5613726 complement(4210078..4211163) 1 NC_009831.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 4211163 prfA 5613726 prfA Shewanella sediminis HAW-EB3 peptide chain release factor 1 YP_001475191.1 4210078 R 425104 CDS YP_001475192.1 157376592 5613621 complement(4211177..4212457) 1 NC_009831.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 4212457 hemA 5613621 hemA Shewanella sediminis HAW-EB3 glutamyl-tRNA reductase YP_001475192.1 4211177 R 425104 CDS YP_001475193.1 157376593 5613622 4212699..4213355 1 NC_009831.1 KEGG: slo:Shew_2914 outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 4213355 5613622 Ssed_3461 Shewanella sediminis HAW-EB3 outer membrane lipoprotein LolB YP_001475193.1 4212699 D 425104 CDS YP_001475194.1 157376594 5613623 4213345..4214199 1 NC_009831.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 4214199 ipk 5613623 ipk Shewanella sediminis HAW-EB3 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001475194.1 4213345 D 425104 CDS YP_001475195.1 157376595 5613529 4214278..4215225 1 NC_009831.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 4215225 5613529 Ssed_3463 Shewanella sediminis HAW-EB3 ribose-phosphate pyrophosphokinase YP_001475195.1 4214278 D 425104 CDS YP_001475196.1 157376596 5613530 complement(4215330..4215662) 1 NC_009831.1 KEGG: nph:NP4120A thioredoxin; thioredoxin 4215662 5613530 Ssed_3464 Shewanella sediminis HAW-EB3 thioredoxin YP_001475196.1 4215330 R 425104 CDS YP_001475197.1 157376597 5613531 complement(4215776..4217083) 1 NC_009831.1 KEGG: shw:Sputw3181_0585 transcriptional regulator, CadC; DNA-binding winged-HTH domain-containing protein 4217083 5613531 Ssed_3465 Shewanella sediminis HAW-EB3 DNA-binding winged-HTH domain-containing protein YP_001475197.1 4215776 R 425104 CDS YP_001475198.1 157376598 5613532 complement(4217288..4219645) 1 NC_009831.1 KEGG: slo:Shew_2521 decaheme cytochrome c MtrF; hypothetical protein 4219645 5613532 Ssed_3466 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475198.1 4217288 R 425104 CDS YP_001475199.1 157376599 5610237 complement(4222492..4223583) 1 NC_009831.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 4223583 5610237 Ssed_3467 Shewanella sediminis HAW-EB3 GTP-dependent nucleic acid-binding protein EngD YP_001475199.1 4222492 R 425104 CDS YP_001475200.1 157376600 5613552 complement(4223761..4224345) 1 NC_009831.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 4224345 5613552 Ssed_3468 Shewanella sediminis HAW-EB3 peptidyl-tRNA hydrolase YP_001475200.1 4223761 R 425104 CDS YP_001475201.1 157376601 5613553 complement(4224650..4225858) 1 NC_009831.1 KEGG: slo:Shew_2921 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 4225858 5613553 Ssed_3469 Shewanella sediminis HAW-EB3 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001475201.1 4224650 R 425104 CDS YP_001475202.1 157376602 5613554 4226158..4226475 1 NC_009831.1 KEGG: sbl:Sbal_3260 hypothetical protein; hypothetical protein 4226475 5613554 Ssed_3470 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475202.1 4226158 D 425104 CDS YP_001475203.1 157376603 5613461 4226571..4227995 1 NC_009831.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 4227995 5613461 Ssed_3471 Shewanella sediminis HAW-EB3 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001475203.1 4226571 D 425104 CDS YP_001475204.1 157376604 5613462 4228165..4229208 1 NC_009831.1 KEGG: slo:Shew_2924 PhoH family protein; PhoH family protein 4229208 5613462 Ssed_3472 Shewanella sediminis HAW-EB3 PhoH family protein YP_001475204.1 4228165 D 425104 CDS YP_001475205.1 157376605 5613463 4229198..4229674 1 NC_009831.1 KEGG: sfr:Sfri_0711 protein of unknown function UPF0054; metalloprotease 4229674 5613463 Ssed_3473 Shewanella sediminis HAW-EB3 metalloprotease YP_001475205.1 4229198 D 425104 CDS YP_001475206.1 157376606 5613464 4229701..4230576 1 NC_009831.1 KEGG: slo:Shew_2926 CBS domain containing protein; hypothetical protein 4230576 5613464 Ssed_3474 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475206.1 4229701 D 425104 CDS YP_001475207.1 157376607 5613361 4230617..4232176 1 NC_009831.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 4232176 lnt 5613361 lnt Shewanella sediminis HAW-EB3 apolipoprotein N-acyltransferase YP_001475207.1 4230617 D 425104 CDS YP_001475208.1 157376608 5613362 4232424..4233320 1 NC_009831.1 KEGG: sfr:Sfri_1536 diguanylate cyclase; diguanylate cyclase 4233320 5613362 Ssed_3476 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475208.1 4232424 D 425104 CDS YP_001475209.1 157376609 5613363 complement(4233476..4235344) 1 NC_009831.1 KEGG: ppr:PBPRA1466 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 4235344 5613363 Ssed_3477 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001475209.1 4233476 R 425104 CDS YP_001475210.1 157376610 5613364 complement(4235733..4236233) 1 NC_009831.1 KEGG: slo:Shew_2928 protein of unknown function DUF1451; hypothetical protein 4236233 5613364 Ssed_3478 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475210.1 4235733 R 425104 CDS YP_001475211.1 157376611 5613276 4236355..4238946 1 NC_009831.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 4238946 leuS 5613276 leuS Shewanella sediminis HAW-EB3 leucyl-tRNA synthetase YP_001475211.1 4236355 D 425104 CDS YP_001475212.1 157376612 5613277 4239084..4239578 1 NC_009831.1 KEGG: slo:Shew_2930 rare lipoprotein B; rare lipoprotein B 4239578 5613277 Ssed_3480 Shewanella sediminis HAW-EB3 rare lipoprotein B YP_001475212.1 4239084 D 425104 CDS YP_001475213.1 157376613 5613278 4239646..4240686 1 NC_009831.1 KEGG: slo:Shew_2931 DNA polymerase III, delta subunit; DNA-directed DNA polymerase 4240686 5613278 Ssed_3481 Shewanella sediminis HAW-EB3 DNA-directed DNA polymerase YP_001475213.1 4239646 D 425104 CDS YP_001475214.1 157376614 5613279 4240888..4241523 1 NC_009831.1 KEGG: slo:Shew_2932 nicotinate (nicotinamide) nucleotide adenylyltransferase; adenosine deaminase 4241523 5613279 Ssed_3482 Shewanella sediminis HAW-EB3 adenosine deaminase YP_001475214.1 4240888 D 425104 CDS YP_001475215.1 157376615 5612834 4241640..4241969 1 NC_009831.1 KEGG: slo:Shew_2933 iojap-like protein; iojap family protein 4241969 5612834 Ssed_3483 Shewanella sediminis HAW-EB3 iojap family protein YP_001475215.1 4241640 D 425104 CDS YP_001475216.1 157376616 5612835 4241969..4242439 1 NC_009831.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 4242439 5612835 Ssed_3484 Shewanella sediminis HAW-EB3 rRNA large subunit methyltransferase YP_001475216.1 4241969 D 425104 CDS YP_001475217.1 157376617 5612836 4242522..4244378 1 NC_009831.1 KEGG: slo:Shew_2935 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 4244378 5612836 Ssed_3485 Shewanella sediminis HAW-EB3 peptidoglycan glycosyltransferase YP_001475217.1 4242522 D 425104 CDS YP_001475218.1 157376618 5612731 4244375..4245481 1 NC_009831.1 KEGG: slo:Shew_2936 rod shape-determining protein RodA; rod shape-determining protein RodA 4245481 5612731 Ssed_3486 Shewanella sediminis HAW-EB3 rod shape-determining protein RodA YP_001475218.1 4244375 D 425104 CDS YP_001475219.1 157376619 5612732 4245673..4246692 1 NC_009831.1 KEGG: shn:Shewana3_0993 lytic murein transglycosylase B; lytic murein transglycosylase B 4246692 5612732 Ssed_3487 Shewanella sediminis HAW-EB3 lytic murein transglycosylase B YP_001475219.1 4245673 D 425104 CDS YP_001475220.1 157376620 5612733 4246679..4247476 1 NC_009831.1 KEGG: slo:Shew_2938 rare lipoprotein A; rare lipoprotein A 4247476 5612733 Ssed_3488 Shewanella sediminis HAW-EB3 rare lipoprotein A YP_001475220.1 4246679 D 425104 CDS YP_001475221.1 157376621 5612734 4247622..4248809 1 NC_009831.1 KEGG: slo:Shew_2939 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 4248809 5612734 Ssed_3489 Shewanella sediminis HAW-EB3 serine-type D-Ala-D-Ala carboxypeptidase YP_001475221.1 4247622 D 425104 CDS YP_001475222.1 157376622 5613048 4248948..4249214 1 NC_009831.1 KEGG: shw:Sputw3181_1029 protein of unknown function DUF493; hypothetical protein 4249214 5613048 Ssed_3490 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475222.1 4248948 D 425104 CDS YP_001475223.1 157376623 5613049 4249364..4250023 1 NC_009831.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 4250023 lipB 5613049 lipB Shewanella sediminis HAW-EB3 lipoate-protein ligase B YP_001475223.1 4249364 D 425104 CDS YP_001475224.1 157376624 5613050 4250016..4250981 1 NC_009831.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 4250981 5613050 Ssed_3492 Shewanella sediminis HAW-EB3 lipoyl synthase YP_001475224.1 4250016 D 425104 CDS YP_001475225.1 157376625 5613051 complement(4251040..4251501) 1 NC_009831.1 KEGG: saz:Sama_2596 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 4251501 5613051 Ssed_3493 Shewanella sediminis HAW-EB3 ribosomal-protein-alanine acetyltransferase YP_001475225.1 4251040 R 425104 CDS YP_001475226.1 157376626 5612718 complement(4251498..4251842) 1 NC_009831.1 KEGG: sfr:Sfri_0690 hypothetical protein; hypothetical protein 4251842 5612718 Ssed_3494 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475226.1 4251498 R 425104 CDS YP_001475227.1 157376627 5609976 complement(4259496..4260275) 1 NC_009831.1 KEGG: saz:Sama_2600 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 4260275 5609976 Ssed_3495 Shewanella sediminis HAW-EB3 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001475227.1 4259496 R 425104 CDS YP_001475228.1 157376628 5612720 4260413..4260847 1 NC_009831.1 KEGG: sbl:Sbal_1020 hypothetical protein; hypothetical protein 4260847 5612720 Ssed_3496 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475228.1 4260413 D 425104 CDS YP_001475229.1 157376629 5612721 complement(4261038..4263611) 1 NC_009831.1 KEGG: slo:Shew_2948 ATPase AAA-2 domain protein; ATPase 4263611 5612721 Ssed_3497 Shewanella sediminis HAW-EB3 ATPase YP_001475229.1 4261038 R 425104 CDS YP_001475230.1 157376630 5612672 complement(4263716..4264498) 1 NC_009831.1 KEGG: sfr:Sfri_0668 protein of unknown function DUF152; hypothetical protein 4264498 5612672 Ssed_3498 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475230.1 4263716 R 425104 CDS YP_001475231.1 157376631 5612673 complement(4264502..4265473) 1 NC_009831.1 KEGG: slo:Shew_2950 pseudouridine synthase, RluA family; lysozyme 4265473 5612673 Ssed_3499 Shewanella sediminis HAW-EB3 lysozyme YP_001475231.1 4264502 R 425104 CDS YP_001475232.1 157376632 5612674 4265509..4266357 1 NC_009831.1 KEGG: shm:Shewmr7_3075 lipoprotein; lipoprotein 4266357 5612674 Ssed_3500 Shewanella sediminis HAW-EB3 lipoprotein YP_001475232.1 4265509 D 425104 CDS YP_001475233.1 157376633 5609977 complement(4266840..4268420) 1 NC_009831.1 KEGG: slo:Shew_2953 diguanylate cyclase; diguanylate cyclase 4268420 5609977 Ssed_3501 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475233.1 4266840 R 425104 CDS YP_001475234.1 157376634 5612608 complement(4268478..4270340) 1 NC_009831.1 KEGG: slo:Shew_2954 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4270340 5612608 Ssed_3502 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001475234.1 4268478 R 425104 CDS YP_001475235.1 157376635 5612609 4270622..4271578 1 NC_009831.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 4271578 5612609 Ssed_3503 Shewanella sediminis HAW-EB3 ornithine cyclodeaminase YP_001475235.1 4270622 D 425104 CDS YP_001475236.1 157376636 5612610 4271814..4272350 1 NC_009831.1 KEGG: slo:Shew_2956 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 4272350 5612610 Ssed_3504 Shewanella sediminis HAW-EB3 ECF subfamily RNA polymerase sigma-24 factor YP_001475236.1 4271814 D 425104 CDS YP_001475237.1 157376637 5612611 4272350..4272883 1 NC_009831.1 KEGG: slo:Shew_2957 hypothetical protein; hypothetical protein 4272883 5612611 Ssed_3505 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475237.1 4272350 D 425104 CDS YP_001475238.1 157376638 5612605 4272880..4273824 1 NC_009831.1 KEGG: slo:Shew_2958 hypothetical protein; hypothetical protein 4273824 5612605 Ssed_3506 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475238.1 4272880 D 425104 CDS YP_001475239.1 157376639 5612606 complement(4273897..4274667) 1 NC_009831.1 KEGG: shw:Sputw3181_3383 pseudouridine synthase; pseudouridine synthase 4274667 5612606 Ssed_3507 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001475239.1 4273897 R 425104 CDS YP_001475240.1 157376640 5612607 4274719..4275264 1 NC_009831.1 KEGG: sbl:Sbal_0686 nodulation protein L; nodulation protein L 4275264 5612607 Ssed_3508 Shewanella sediminis HAW-EB3 nodulation protein L YP_001475240.1 4274719 D 425104 CDS YP_001475241.1 157376641 5612280 4275510..4277594 1 NC_009831.1 KEGG: slo:Shew_2973 endothelin-converting enzyme 1; endothelin-converting protein 1 4277594 5612280 Ssed_3509 Shewanella sediminis HAW-EB3 endothelin-converting protein 1 YP_001475241.1 4275510 D 425104 CDS YP_001475242.1 157376642 5612281 4277771..4278574 1 NC_009831.1 KEGG: shm:Shewmr7_0786 hypothetical protein; hypothetical protein 4278574 5612281 Ssed_3510 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475242.1 4277771 D 425104 CDS YP_001475243.1 157376643 5612282 4278811..4279212 1 NC_009831.1 KEGG: slo:Shew_2971 hypothetical protein; hypothetical protein 4279212 5612282 Ssed_3511 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475243.1 4278811 D 425104 CDS YP_001475244.1 157376644 5612283 4279349..4279849 1 NC_009831.1 KEGG: slo:Shew_2970 hypothetical protein; hypothetical protein 4279849 5612283 Ssed_3512 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475244.1 4279349 D 425104 CDS YP_001475245.1 157376645 5612236 complement(4279976..4280599) 1 NC_009831.1 KEGG: slo:Shew_2968 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 4280599 5612236 Ssed_3513 Shewanella sediminis HAW-EB3 glutathione S-transferase domain-containing protein YP_001475245.1 4279976 R 425104 CDS YP_001475246.1 157376646 5612237 4280952..4281326 1 NC_009831.1 KEGG: neu:NE0566 domain of unknown function 2:response regulator receiver domain; hypothetical protein 4281326 5612237 Ssed_3514 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475246.1 4280952 D 425104 CDS YP_001475247.1 157376647 5612238 4281510..4282787 1 NC_009831.1 KEGG: shw:Sputw3181_3389 manganese transporter; manganese transporter 4282787 5612238 Ssed_3515 Shewanella sediminis HAW-EB3 manganese transporter YP_001475247.1 4281510 D 425104 CDS YP_001475248.1 157376648 5612239 4282799..4284196 1 NC_009831.1 KEGG: she:Shewmr4_0756 beta-lactamase; beta-lactamase 4284196 5612239 Ssed_3516 Shewanella sediminis HAW-EB3 beta-lactamase YP_001475248.1 4282799 D 425104 CDS YP_001475249.1 157376649 5612350 4284282..4284746 1 NC_009831.1 KEGG: slo:Shew_2963 protein of unknown function DUF1456; hypothetical protein 4284746 5612350 Ssed_3517 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475249.1 4284282 D 425104 CDS YP_001475250.1 157376650 5612351 4285304..4286992 1 NC_009831.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 4286992 5612351 Ssed_3518 Shewanella sediminis HAW-EB3 malate dehydrogenase YP_001475250.1 4285304 D 425104 CDS YP_001475251.1 157376651 5612352 4287626..4287901 1 NC_009831.1 hypothetical protein 4287901 5612352 Ssed_3519 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475251.1 4287626 D 425104 CDS YP_001475252.1 157376652 5612353 complement(4288358..4288795) 1 NC_009831.1 KEGG: slo:Shew_2976 hypothetical protein; hypothetical protein 4288795 5612353 Ssed_3520 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475252.1 4288358 R 425104 CDS YP_001475253.1 157376653 5612140 complement(4288877..4289401) 1 NC_009831.1 KEGG: cps:CPS_1441 PAP2 family protein; PAP2 family protein 4289401 5612140 Ssed_3521 Shewanella sediminis HAW-EB3 PAP2 family protein YP_001475253.1 4288877 R 425104 CDS YP_001475254.1 157376654 5612141 4289630..4291540 1 NC_009831.1 KEGG: slo:Shew_2977 diguanylate cyclase; diguanylate cyclase 4291540 5612141 Ssed_3522 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475254.1 4289630 D 425104 CDS YP_001475255.1 157376655 5612142 complement(4291541..4292347) 1 NC_009831.1 KEGG: she:Shewmr4_3192 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4292347 5612142 Ssed_3523 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001475255.1 4291541 R 425104 CDS YP_001475256.1 157376656 5612143 4292725..4293720 1 NC_009831.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 4293720 5612143 Ssed_3524 Shewanella sediminis HAW-EB3 adenosine deaminase YP_001475256.1 4292725 D 425104 CDS YP_001475257.1 157376657 5612105 complement(4293866..4295326) 1 NC_009831.1 KEGG: pol:Bpro_2062 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4295326 5612105 Ssed_3525 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001475257.1 4293866 R 425104 CDS YP_001475258.1 157376658 5612106 4295811..4297007 1 NC_009831.1 KEGG: slo:Shew_2979 iron-sulfur cluster binding protein; iron-sulfur cluster binding protein 4297007 5612106 Ssed_3526 Shewanella sediminis HAW-EB3 iron-sulfur cluster binding protein YP_001475258.1 4295811 D 425104 CDS YP_001475259.1 157376659 5612107 complement(4297067..4297279) 1 NC_009831.1 KEGG: slo:Shew_2980 protein of unknown function DUF1458; hypothetical protein 4297279 5612107 Ssed_3527 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475259.1 4297067 R 425104 CDS YP_001475260.1 157376660 5612108 complement(4297594..4299150) 1 NC_009831.1 KEGG: pnu:Pnuc_1320 alpha/beta hydrolase fold; alpha/beta fold family hydrolase/acetyltransferase-like protein 4299150 5612108 Ssed_3528 Shewanella sediminis HAW-EB3 alpha/beta fold family hydrolase/acetyltransferase-like protein YP_001475260.1 4297594 R 425104 CDS YP_001475261.1 157376661 5612098 complement(4299168..4300052) 1 NC_009831.1 KEGG: bce:BC3312 3-oxoadipate enol-lactonase; 3-oxoadipate enol-lactonase 4300052 5612098 Ssed_3529 Shewanella sediminis HAW-EB3 3-oxoadipate enol-lactonase YP_001475261.1 4299168 R 425104 CDS YP_001475262.1 157376662 5612099 4300229..4301335 1 NC_009831.1 KEGG: mxa:MXAN_0221 lipase; hypothetical protein 4301335 5612099 Ssed_3530 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475262.1 4300229 D 425104 CDS YP_001475263.1 157376663 5612100 4301404..4302738 1 NC_009831.1 KEGG: sat:SYN_03116 hypothetical protein; hypothetical protein 4302738 5612100 Ssed_3531 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475263.1 4301404 D 425104 CDS YP_001475264.1 157376664 5612062 4303122..4304789 1 NC_009831.1 KEGG: sbl:Sbal_0641 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4304789 5612062 Ssed_3532 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001475264.1 4303122 D 425104 CDS YP_001475265.1 157376665 5612063 complement(4305052..4306263) 1 NC_009831.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 4306263 5612063 Ssed_3533 Shewanella sediminis HAW-EB3 acetyl-CoA acetyltransferase YP_001475265.1 4305052 R 425104 CDS YP_001475266.1 157376666 5612064 complement(4306272..4307006) 1 NC_009831.1 KEGG: ppr:PBPRB1562 hypothetical 3-oxoacyl-(acyl carrier protein) reductase; 3-oxoacyl-ACP reductase 4307006 5612064 Ssed_3534 Shewanella sediminis HAW-EB3 3-oxoacyl-ACP reductase YP_001475266.1 4306272 R 425104 CDS YP_001475267.1 157376667 5612065 4307338..4308249 1 NC_009831.1 KEGG: ppr:PBPRB1563 hypothetical transcription regulator; transcriptional regulator 4308249 5612065 Ssed_3535 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001475267.1 4307338 D 425104 CDS YP_001475268.1 157376668 5611981 4308586..4310175 1 NC_009831.1 KEGG: pth:PTH_0512 acyl CoA:acetate/3-ketoacid CoA transferase; acetate/3-ketoacid CoA transferase 4310175 5611981 Ssed_3536 Shewanella sediminis HAW-EB3 acetate/3-ketoacid CoA transferase YP_001475268.1 4308586 D 425104 CDS YP_001475269.1 157376669 5611982 4310297..4310716 1 NC_009831.1 KEGG: cps:CPS_3371 MaoC domain protein; MaoC domain-containing protein 4310716 5611982 Ssed_3537 Shewanella sediminis HAW-EB3 MaoC domain-containing protein YP_001475269.1 4310297 D 425104 CDS YP_001475270.1 157376670 5611983 4310738..4311940 1 NC_009831.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 4311940 5611983 Ssed_3538 Shewanella sediminis HAW-EB3 trans-2-enoyl-CoA reductase YP_001475270.1 4310738 D 425104 CDS YP_001475271.1 157376671 5611984 4312040..4313236 1 NC_009831.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 4313236 5611984 Ssed_3539 Shewanella sediminis HAW-EB3 acetate kinase YP_001475271.1 4312040 D 425104 CDS YP_001475272.1 157376672 5611950 4313346..4315484 1 NC_009831.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 4315484 5611950 Ssed_3540 Shewanella sediminis HAW-EB3 phosphate acetyltransferase YP_001475272.1 4313346 D 425104 CDS YP_001475273.1 157376673 5611951 4315709..4316641 1 NC_009831.1 KEGG: ppr:PBPRA2526 hypothetical protein similar to lipase; hypothetical protein 4316641 5611951 Ssed_3541 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475273.1 4315709 D 425104 CDS YP_001475274.1 157376674 5611952 complement(4316856..4318547) 1 NC_009831.1 KEGG: slo:Shew_2982 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 4318547 5611952 Ssed_3542 Shewanella sediminis HAW-EB3 glucose-methanol-choline oxidoreductase YP_001475274.1 4316856 R 425104 CDS YP_001475275.1 157376675 5611953 complement(4318588..4319319) 1 NC_009831.1 KEGG: slo:Shew_2983 Tat (twin-arginine translocation) pathway signal sequence domain protein; hypothetical protein 4319319 5611953 Ssed_3543 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475275.1 4318588 R 425104 CDS YP_001475276.1 157376676 5611926 complement(4319313..4319912) 1 NC_009831.1 KEGG: btk:BT9727_1356 thiol-disulfide oxidoreductase; hypothetical protein 4319912 5611926 Ssed_3544 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475276.1 4319313 R 425104 CDS YP_001475277.1 157376677 5611927 4320143..4321531 1 NC_009831.1 KEGG: bba:Bd0322 D-amino acid dehydrogenase; D-amino acid dehydrogenase 4321531 5611927 Ssed_3545 Shewanella sediminis HAW-EB3 D-amino acid dehydrogenase YP_001475277.1 4320143 D 425104 CDS YP_001475278.1 157376678 5611928 4321616..4321942 1 NC_009831.1 hypothetical protein 4321942 5611928 Ssed_3546 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475278.1 4321616 D 425104 CDS YP_001475279.1 157376679 5611929 4322013..4322354 1 NC_009831.1 KEGG: mxa:MXAN_5993 hypothetical protein; hypothetical protein 4322354 5611929 Ssed_3547 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475279.1 4322013 D 425104 CDS YP_001475280.1 157376680 5611851 complement(4322689..4323237) 1 NC_009831.1 KEGG: shw:Sputw3181_3956 redoxin domain protein; redoxin domain-containing protein 4323237 5611851 Ssed_3548 Shewanella sediminis HAW-EB3 redoxin domain-containing protein YP_001475280.1 4322689 R 425104 CDS YP_001475281.1 157376681 5611852 complement(4323264..4324082) 1 NC_009831.1 KEGG: spc:Sputcn32_0115 DsbA oxidoreductase; DsbA oxidoreductase 4324082 5611852 Ssed_3549 Shewanella sediminis HAW-EB3 DsbA oxidoreductase YP_001475281.1 4323264 R 425104 CDS YP_001475282.1 157376682 5611853 complement(4324196..4326328) 1 NC_009831.1 KEGG: shw:Sputw3181_3958 suppressor for copper-sensitivity B precursor; suppressor for copper-sensitivity B 4326328 5611853 Ssed_3550 Shewanella sediminis HAW-EB3 suppressor for copper-sensitivity B YP_001475282.1 4324196 R 425104 CDS YP_001475283.1 157376683 5611854 complement(4326500..4326976) 1 NC_009831.1 KEGG: spc:Sputcn32_0113 hypothetical protein; hypothetical protein 4326976 5611854 Ssed_3551 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475283.1 4326500 R 425104 CDS YP_001475284.1 157376684 5611730 4327370..4328920 1 NC_009831.1 KEGG: slo:Shew_2984 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 4328920 5611730 Ssed_3552 Shewanella sediminis HAW-EB3 ferredoxin-dependent glutamate synthase YP_001475284.1 4327370 D 425104 CDS YP_001475285.1 157376685 5611731 4329424..4331442 1 NC_009831.1 KEGG: saz:Sama_2967 conserved hypothetical protein; hypothetical protein 4331442 5611731 Ssed_3553 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475285.1 4329424 D 425104 CDS YP_001475286.1 157376686 5611732 4331445..4332599 1 NC_009831.1 KEGG: saz:Sama_2968 hypothetical protein; hypothetical protein 4332599 5611732 Ssed_3554 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475286.1 4331445 D 425104 CDS YP_001475287.1 157376687 5611823 complement(4332806..4335115) 1 NC_009831.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4335115 5611823 Ssed_3555 Shewanella sediminis HAW-EB3 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_001475287.1 4332806 R 425104 CDS YP_001475288.1 157376688 5611824 4335329..4336234 1 NC_009831.1 KEGG: shn:Shewana3_3470 transcriptional regulator, LysR family; LysR family transcriptional regulator 4336234 5611824 Ssed_3556 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475288.1 4335329 D 425104 CDS YP_001475289.1 157376689 5611825 complement(4336366..4337094) 1 NC_009831.1 KEGG: slo:Shew_2988 signal transduction protein; signal transduction protein 4337094 5611825 Ssed_3557 Shewanella sediminis HAW-EB3 signal transduction protein YP_001475289.1 4336366 R 425104 CDS YP_001475290.1 157376690 5611826 complement(4337482..4338087) 1 NC_009831.1 KEGG: saz:Sama_2630 lipolytic enzyme, G-D-S-L; lipolytic protein G-D-S-L 4338087 5611826 Ssed_3558 Shewanella sediminis HAW-EB3 lipolytic protein G-D-S-L YP_001475290.1 4337482 R 425104 CDS YP_001475291.1 157376691 5611716 complement(4338313..4340310) 1 NC_009831.1 KEGG: sbl:Sbal_0663 TonB-dependent receptor; TonB-dependent receptor 4340310 5611716 Ssed_3559 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001475291.1 4338313 R 425104 CDS YP_001475292.1 157376692 5611717 complement(4340803..4341591) 1 NC_009831.1 KEGG: shm:Shewmr7_0650 hypothetical protein; hypothetical protein 4341591 5611717 Ssed_3560 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475292.1 4340803 R 425104 CDS YP_001475293.1 157376693 5611718 complement(4341816..4342766) 1 NC_009831.1 KEGG: slo:Shew_3158 polysulphide reductase, NrfD; polysulfide reductase NrfD 4342766 5611718 Ssed_3561 Shewanella sediminis HAW-EB3 polysulfide reductase NrfD YP_001475293.1 4341816 R 425104 CDS YP_001475294.1 157376694 5611719 complement(4342763..4343458) 1 NC_009831.1 KEGG: slo:Shew_3157 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4343458 5611719 Ssed_3562 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475294.1 4342763 R 425104 CDS YP_001475295.1 157376695 5611552 complement(4343473..4343973) 1 NC_009831.1 KEGG: sfr:Sfri_0615 hypothetical protein; hypothetical protein 4343973 5611552 Ssed_3563 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475295.1 4343473 R 425104 CDS YP_001475296.1 157376696 5611553 complement(4344057..4344560) 1 NC_009831.1 KEGG: slo:Shew_3155 hypothetical protein; hypothetical protein 4344560 5611553 Ssed_3564 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475296.1 4344057 R 425104 CDS YP_001475297.1 157376697 5611554 4344938..4345918 1 NC_009831.1 KEGG: slo:Shew_3154 transcriptional regulator, LysR family; LysR family transcriptional regulator 4345918 5611554 Ssed_3565 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475297.1 4344938 D 425104 CDS YP_001475298.1 157376698 5611555 complement(4345961..4346959) 1 NC_009831.1 KEGG: slo:Shew_3153 transcriptional regulator, LysR family; LysR family transcriptional regulator 4346959 5611555 Ssed_3566 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475298.1 4345961 R 425104 CDS YP_001475299.1 157376699 5613381 4347419..4348963 1 NC_009831.1 KEGG: slo:Shew_2996 hypothetical protein; hypothetical protein 4348963 5613381 Ssed_3567 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475299.1 4347419 D 425104 CDS YP_001475300.1 157376700 5613382 4348982..4349569 1 NC_009831.1 KEGG: slo:Shew_2997 acetyltransferase-like protein; acetyltransferase-like protein 4349569 5613382 Ssed_3568 Shewanella sediminis HAW-EB3 acetyltransferase-like protein YP_001475300.1 4348982 D 425104 CDS YP_001475301.1 157376701 5613383 4349678..4350499 1 NC_009831.1 KEGG: slo:Shew_2998 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase 4350499 5613383 Ssed_3569 Shewanella sediminis HAW-EB3 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001475301.1 4349678 D 425104 CDS YP_001475302.1 157376702 5613384 4350711..4351019 1 NC_009831.1 KEGG: slo:Shew_2999 hypothetical protein; hypothetical protein 4351019 5613384 Ssed_3570 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475302.1 4350711 D 425104 CDS YP_001475303.1 157376703 5611614 4351012..4352844 1 NC_009831.1 KEGG: slo:Shew_3000 diguanylate cyclase; diguanylate cyclase 4352844 5611614 Ssed_3571 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475303.1 4351012 D 425104 CDS YP_001475304.1 157376704 5611615 4352947..4353465 1 NC_009831.1 hypothetical protein 4353465 5611615 Ssed_3572 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475304.1 4352947 D 425104 CDS YP_001475305.1 157376705 5611616 4353810..4356272 1 NC_009831.1 KEGG: pin:Ping_1040 chaperone endopeptidase Clp ATP-binding chain B,ClpB; chaperone endopeptidase Clp ATP-binding chain B,ClpB 4356272 5611616 Ssed_3573 Shewanella sediminis HAW-EB3 chaperone endopeptidase Clp ATP-binding chain B,ClpB YP_001475305.1 4353810 D 425104 CDS YP_001475306.1 157376706 5611617 complement(4356375..4356908) 1 NC_009831.1 KEGG: vfi:VFA1108 hypothetical protein; hypothetical protein 4356908 5611617 Ssed_3574 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475306.1 4356375 R 425104 CDS YP_001475307.1 157376707 5613573 complement(4357052..4358293) 1 NC_009831.1 KEGG: bpd:BURPS668_3008 drug resistance transporter, Bcr/CflA family; Bcr/CflA subfamily drug resistance transporter 4358293 5613573 Ssed_3575 Shewanella sediminis HAW-EB3 Bcr/CflA subfamily drug resistance transporter YP_001475307.1 4357052 R 425104 CDS YP_001475308.1 157376708 5613574 4358395..4359324 1 NC_009831.1 KEGG: cps:CPS_1244 transcriptional regulator, LysR family; carbonate dehydratase 4359324 5613574 Ssed_3576 Shewanella sediminis HAW-EB3 carbonate dehydratase YP_001475308.1 4358395 D 425104 CDS YP_001475309.1 157376709 5613575 complement(4359824..4361041) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 4361041 5613575 Ssed_3577 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit F YP_001475309.1 4359824 R 425104 CDS YP_001475310.1 157376710 5611106 complement(4361100..4361708) 1 NC_009831.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 4361708 5611106 Ssed_3578 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit E YP_001475310.1 4361100 R 425104 CDS YP_001475311.1 157376711 5611107 complement(4361718..4362341) 1 NC_009831.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 4362341 5611107 Ssed_3579 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit D YP_001475311.1 4361718 R 425104 CDS YP_001475312.1 157376712 5611108 complement(4362343..4363113) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 4363113 5611108 Ssed_3580 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit C YP_001475312.1 4362343 R 425104 CDS YP_001475313.1 157376713 5611109 complement(4363103..4364317) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 4364317 5611109 Ssed_3581 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit B YP_001475313.1 4363103 R 425104 CDS YP_001475314.1 157376714 5614009 complement(4364406..4365767) 1 NC_009831.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 4365767 5614009 Ssed_3582 Shewanella sediminis HAW-EB3 Na(+)-translocating NADH-quinone reductase subunit A YP_001475314.1 4364406 R 425104 CDS YP_001475315.1 157376715 5614010 4366328..4368544 1 NC_009831.1 KEGG: slo:Shew_3001 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4368544 5614010 Ssed_3583 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001475315.1 4366328 D 425104 CDS YP_001475316.1 157376716 5614011 complement(4368916..4369881) 1 NC_009831.1 KEGG: pin:Ping_1300 ABC sugar transporter inner membrane translocator; ABC sugar transporter inner membrane translocator 4369881 5614011 Ssed_3584 Shewanella sediminis HAW-EB3 ABC sugar transporter inner membrane translocator YP_001475316.1 4368916 R 425104 CDS YP_001475317.1 157376717 5614012 complement(4369885..4371015) 1 NC_009831.1 KEGG: pin:Ping_1299 ABC transporter inner-membrane translocator; ABC transporter inner-membrane translocator 4371015 5614012 Ssed_3585 Shewanella sediminis HAW-EB3 ABC transporter inner-membrane translocator YP_001475317.1 4369885 R 425104 CDS YP_001475318.1 157376718 5613521 complement(4371012..4372601) 1 NC_009831.1 KEGG: pin:Ping_1298 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 4372601 5613521 Ssed_3586 Shewanella sediminis HAW-EB3 ABC transporter ATP-binding protein YP_001475318.1 4371012 R 425104 CDS YP_001475319.1 157376719 5613522 complement(4372729..4373733) 1 NC_009831.1 KEGG: pin:Ping_1297 basic membrane lipoprotein; basic membrane lipoprotein 4373733 5613522 Ssed_3587 Shewanella sediminis HAW-EB3 basic membrane lipoprotein YP_001475319.1 4372729 R 425104 CDS YP_001475320.1 157376720 5613523 complement(4374670..4376907) 1 NC_009831.1 KEGG: son:SO1779 decaheme cytochrome c; decaheme cytochrome c 4376907 5613523 Ssed_3588 Shewanella sediminis HAW-EB3 decaheme cytochrome c YP_001475320.1 4374670 R 425104 CDS YP_001475321.1 157376721 5613524 4377318..4378274 1 NC_009831.1 KEGG: son:SO4571 transcriptional regulator, LysR family; transcriptional regulator-like protein 4378274 5613524 Ssed_3589 Shewanella sediminis HAW-EB3 transcriptional regulator-like protein YP_001475321.1 4377318 D 425104 CDS YP_001475322.1 157376722 5613847 4378291..4379241 1 NC_009831.1 KEGG: shw:Sputw3181_3897 transcriptional regulator, LysR family; transcriptional regulator-like protein 4379241 5613847 Ssed_3590 Shewanella sediminis HAW-EB3 transcriptional regulator-like protein YP_001475322.1 4378291 D 425104 CDS YP_001475323.1 157376723 5613848 complement(4379357..4379584) 1 NC_009831.1 KEGG: slo:Shew_2961 hypothetical protein; hypothetical protein 4379584 5613848 Ssed_3591 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475323.1 4379357 R 425104 CDS YP_001475324.1 157376724 5613849 4379862..4380401 1 NC_009831.1 KEGG: vfi:VFA0032 thioredoxin peroxidase; thioredoxin peroxidase 4380401 5613849 Ssed_3592 Shewanella sediminis HAW-EB3 thioredoxin peroxidase YP_001475324.1 4379862 D 425104 CDS YP_001475325.1 157376725 5613850 complement(4380467..4381267) 1 NC_009831.1 KEGG: slo:Shew_3002 hypothetical protein; hypothetical protein 4381267 5613850 Ssed_3593 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475325.1 4380467 R 425104 CDS YP_001475326.1 157376726 5613426 complement(4381451..4382275) 1 NC_009831.1 KEGG: hch:HCH_04060 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic protein 4382275 5613426 Ssed_3594 Shewanella sediminis HAW-EB3 amino acid ABC transporter periplasmic protein YP_001475326.1 4381451 R 425104 CDS YP_001475327.1 157376727 5613427 4382745..4383779 1 NC_009831.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 4383779 5613427 Ssed_3595 Shewanella sediminis HAW-EB3 dihydroorotase YP_001475327.1 4382745 D 425104 CDS YP_001475328.1 157376728 5613428 complement(4383882..4385003) 1 NC_009831.1 KEGG: ppr:PBPRB1509 membrane protein; hypothetical protein 4385003 5613428 Ssed_3596 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475328.1 4383882 R 425104 CDS YP_001475329.1 157376729 5613429 4385228..4386658 1 NC_009831.1 KEGG: shw:Sputw3181_2944 glutathione synthase; glutathione synthase 4386658 5613429 Ssed_3597 Shewanella sediminis HAW-EB3 glutathione synthase YP_001475329.1 4385228 D 425104 CDS YP_001475330.1 157376730 5610990 complement(4386752..4387060) 1 NC_009831.1 KEGG: vfi:VFA0176 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 4387060 5610990 Ssed_3598 Shewanella sediminis HAW-EB3 ArsR family transcriptional regulator YP_001475330.1 4386752 R 425104 CDS YP_001475331.1 157376731 5610991 4387239..4388621 1 NC_009831.1 KEGG: cps:CPS_2704 hypothetical protein; hypothetical protein 4388621 5610991 Ssed_3599 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475331.1 4387239 D 425104 CDS YP_001475332.1 157376732 5610992 4388722..4389000 1 NC_009831.1 KEGG: slo:Shew_3008 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 4389000 5610992 Ssed_3600 Shewanella sediminis HAW-EB3 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001475332.1 4388722 D 425104 CDS YP_001475333.1 157376733 5613913 complement(4389206..4389451) 1 NC_009831.1 hypothetical protein 4389451 5613913 Ssed_3601 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475333.1 4389206 R 425104 CDS YP_001475334.1 157376734 5613914 4389934..4390323 1 NC_009831.1 KEGG: gme:Gmet_2649 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4390323 5613914 Ssed_3602 Shewanella sediminis HAW-EB3 glyoxalase/bleomycin resistance protein/dioxygenase YP_001475334.1 4389934 D 425104 CDS YP_001475335.1 157376735 5613915 4390688..4391614 1 NC_009831.1 KEGG: ppr:PBPRA1646 conserved hypothetical protein; hypothetical protein 4391614 5613915 Ssed_3603 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475335.1 4390688 D 425104 CDS YP_001475336.1 157376736 5613916 4391758..4393158 1 NC_009831.1 KEGG: vpa:VP0618 hypothetical protein; hypothetical protein 4393158 5613916 Ssed_3604 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475336.1 4391758 D 425104 CDS YP_001475337.1 157376737 5610124 4393268..4394143 1 NC_009831.1 KEGG: ppr:PBPRB0725 hypothetical protein; hypothetical protein 4394143 5610124 Ssed_3605 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475337.1 4393268 D 425104 CDS YP_001475338.1 157376738 5610125 4394225..4395091 1 NC_009831.1 KEGG: ppr:PBPRB0729 hypothetical protein; hypothetical protein 4395091 5610125 Ssed_3606 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475338.1 4394225 D 425104 CDS YP_001475339.1 157376739 5610126 complement(4395185..4395649) 1 NC_009831.1 KEGG: sbl:Sbal_3797 hypothetical protein; hypothetical protein 4395649 5610126 Ssed_3607 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475339.1 4395185 R 425104 CDS YP_001475340.1 157376740 5610127 complement(4395820..4396842) 1 NC_009831.1 KEGG: sfr:Sfri_2277 oxidoreductase domain protein; oxidoreductase domain-containing protein 4396842 5610127 Ssed_3608 Shewanella sediminis HAW-EB3 oxidoreductase domain-containing protein YP_001475340.1 4395820 R 425104 CDS YP_001475341.1 157376741 5611571 complement(4396846..4397148) 1 NC_009831.1 KEGG: ppr:PBPRA1400 hypothetical protein; hypothetical protein 4397148 5611571 Ssed_3609 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475341.1 4396846 R 425104 CDS YP_001475342.1 157376742 5611572 4397250..4398149 1 NC_009831.1 KEGG: ppr:PBPRA1401 hypothetical transcriptional regulator, LysR family; hypothetical protein 4398149 5611572 Ssed_3610 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475342.1 4397250 D 425104 CDS YP_001475343.1 157376743 5611573 complement(4398178..4399083) 1 NC_009831.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 4399083 miaA 5611573 miaA Shewanella sediminis HAW-EB3 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001475343.1 4398178 R 425104 CDS YP_001475344.1 157376744 5611574 complement(4399291..4400001) 1 NC_009831.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 4400001 5611574 Ssed_3612 Shewanella sediminis HAW-EB3 purine nucleoside phosphorylase YP_001475344.1 4399291 R 425104 CDS YP_001475345.1 157376745 5611755 complement(4400419..4401018) 1 NC_009831.1 KEGG: cps:CPS_2520 short chain dehydrogenase; short chain dehydrogenase 4401018 5611755 Ssed_3613 Shewanella sediminis HAW-EB3 short chain dehydrogenase YP_001475345.1 4400419 R 425104 CDS YP_001475346.1 157376746 5611756 4401142..4402023 1 NC_009831.1 KEGG: cps:CPS_2521 transcriptional regulator, LysR family; LysR family transcriptional regulator 4402023 5611756 Ssed_3614 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475346.1 4401142 D 425104 CDS YP_001475347.1 157376747 5611757 complement(4402088..4403038) 1 NC_009831.1 KEGG: cps:CPS_3320 transcriptional regulator, LysR family; LysR family transcriptional regulator 4403038 5611757 Ssed_3615 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475347.1 4402088 R 425104 CDS YP_001475348.1 157376748 5611758 4403196..4404008 1 NC_009831.1 KEGG: cps:CPS_3319 enoyl-CoA hydratase/isomerase family protein; enoyl-CoA hydratase/isomerase family protein 4404008 5611758 Ssed_3616 Shewanella sediminis HAW-EB3 enoyl-CoA hydratase/isomerase family protein YP_001475348.1 4403196 D 425104 CDS YP_001475349.1 157376749 5611827 4404054..4404935 1 NC_009831.1 KEGG: swo:Swol_0919 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase 4404935 5611827 Ssed_3617 Shewanella sediminis HAW-EB3 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase YP_001475349.1 4404054 D 425104 CDS YP_001475350.1 157376750 5611828 complement(4405091..4406179) 1 NC_009831.1 KEGG: swo:Swol_1378 hypothetical protein; hypothetical protein 4406179 5611828 Ssed_3618 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475350.1 4405091 R 425104 CDS YP_001475351.1 157376751 5611829 4406605..4407138 1 NC_009831.1 KEGG: cps:CPS_1243 FMN reductase, NADPH-dependent; FMN reductase, NADPH-dependent 4407138 5611829 Ssed_3619 Shewanella sediminis HAW-EB3 FMN reductase, NADPH-dependent YP_001475351.1 4406605 D 425104 CDS YP_001475352.1 157376752 5611830 4407354..4408976 1 NC_009831.1 KEGG: dar:Daro_3357 GAF; GAF containing protein 4408976 5611830 Ssed_3620 Shewanella sediminis HAW-EB3 GAF containing protein YP_001475352.1 4407354 D 425104 CDS YP_001475353.1 157376753 5612320 4408986..4410809 1 NC_009831.1 KEGG: hha:Hhal_1889 adenylate/guanylate cyclase; guanylate cyclase 4410809 5612320 Ssed_3621 Shewanella sediminis HAW-EB3 guanylate cyclase YP_001475353.1 4408986 D 425104 CDS YP_001475354.1 157376754 5612321 4410806..4411369 1 NC_009831.1 hypothetical protein 4411369 5612321 Ssed_3622 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475354.1 4410806 D 425104 CDS YP_001475355.1 157376755 5612322 4411366..4412250 1 NC_009831.1 KEGG: tbd:Tbd_0982 Zn-dependent protease containing TPR repeats; TPR repeat-containing Zn-dependent protease 4412250 5612322 Ssed_3623 Shewanella sediminis HAW-EB3 TPR repeat-containing Zn-dependent protease YP_001475355.1 4411366 D 425104 CDS YP_001475356.1 157376756 5612225 complement(4412293..4413318) 1 NC_009831.1 KEGG: slo:Shew_0794 diguanylate cyclase; diguanylate cyclase 4413318 5612225 Ssed_3624 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475356.1 4412293 R 425104 CDS YP_001475357.1 157376757 5612226 complement(4413591..4414166) 1 NC_009831.1 KEGG: cps:CPS_0318 hypothetical protein; hypothetical protein 4414166 5612226 Ssed_3625 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475357.1 4413591 R 425104 CDS YP_001475358.1 157376758 5612227 complement(4414495..4416225) 1 NC_009831.1 KEGG: abo:ABO_1526 hypothetical protein; hypothetical protein 4416225 5612227 Ssed_3626 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475358.1 4414495 R 425104 CDS YP_001475359.1 157376759 5612228 4416781..4417683 1 NC_009831.1 KEGG: vvu:VV2_0787 DNA gyrase inhibitor; DNA gyrase inhibitor 4417683 5612228 Ssed_3627 Shewanella sediminis HAW-EB3 DNA gyrase inhibitor YP_001475359.1 4416781 D 425104 CDS YP_001475360.1 157376760 5612403 4418105..4418350 1 NC_009831.1 KEGG: ppr:PBPRB0452 hypothetical protein; hypothetical protein 4418350 5612403 Ssed_3628 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475360.1 4418105 D 425104 CDS YP_001475361.1 157376761 5612404 4418556..4419452 1 NC_009831.1 KEGG: slo:Shew_0978 band 7 protein; hypothetical protein 4419452 5612404 Ssed_3629 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475361.1 4418556 D 425104 CDS YP_001475362.1 157376762 5612405 complement(4419580..4420134) 1 NC_009831.1 KEGG: shm:Shewmr7_3765 OmpA domain protein transmembrane region-containing protein; OmpA domain-containing protein 4420134 5612405 Ssed_3630 Shewanella sediminis HAW-EB3 OmpA domain-containing protein YP_001475362.1 4419580 R 425104 CDS YP_001475363.1 157376763 5612406 4420518..4422278 1 NC_009831.1 KEGG: lmf:LMOf2365_0347 cell wall surface anchor family protein; hypothetical protein 4422278 5612406 Ssed_3631 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475363.1 4420518 D 425104 CDS YP_001475364.1 157376764 5612094 4422458..4422775 1 NC_009831.1 KEGG: slo:Shew_3027 hypothetical protein; hypothetical protein 4422775 5612094 Ssed_3632 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475364.1 4422458 D 425104 CDS YP_001475365.1 157376765 5612095 4422878..4424947 1 NC_009831.1 KEGG: sfr:Sfri_1958 endothelin-converting enzyme 1; endothelin-converting protein 1 4424947 5612095 Ssed_3633 Shewanella sediminis HAW-EB3 endothelin-converting protein 1 YP_001475365.1 4422878 D 425104 CDS YP_001475366.1 157376766 5612096 complement(4425102..4426388) 1 NC_009831.1 KEGG: vvy:VV2444 long-chain fatty acid transport protein; long-chain fatty acid transport protein 4426388 5612096 Ssed_3634 Shewanella sediminis HAW-EB3 long-chain fatty acid transport protein YP_001475366.1 4425102 R 425104 CDS YP_001475367.1 157376767 5612097 complement(4426784..4427032) 1 NC_009831.1 KEGG: slo:Shew_3030 hypothetical protein; hypothetical protein 4427032 5612097 Ssed_3635 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475367.1 4426784 R 425104 CDS YP_001475368.1 157376768 5612646 complement(4427180..4429477) 1 NC_009831.1 KEGG: nha:Nham_3287 molybdopterin oxidoreductase; molybdopterin oxidoreductase 4429477 5612646 Ssed_3636 Shewanella sediminis HAW-EB3 molybdopterin oxidoreductase YP_001475368.1 4427180 R 425104 CDS YP_001475369.1 157376769 5612647 4429845..4431263 1 NC_009831.1 KEGG: vei:Veis_4069 peptidase S1 and S6, chymotrypsin/Hap; hypothetical protein 4431263 5612647 Ssed_3637 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475369.1 4429845 D 425104 CDS YP_001475370.1 157376770 5612648 4431615..4433834 1 NC_009831.1 KEGG: son:SO0719 TonB-dependent receptor; TonB-dependent receptor 4433834 5612648 Ssed_3638 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001475370.1 4431615 D 425104 CDS YP_001475371.1 157376771 5612649 complement(4434162..4435448) 1 NC_009831.1 KEGG: spc:Sputcn32_2888 beta-lactamase domain protein; beta-lactamase domain-containing protein 4435448 5612649 Ssed_3639 Shewanella sediminis HAW-EB3 beta-lactamase domain-containing protein YP_001475371.1 4434162 R 425104 CDS YP_001475372.1 157376772 5612743 complement(4435448..4436359) 1 NC_009831.1 KEGG: spc:Sputcn32_2889 hypothetical protein; hypothetical protein 4436359 5612743 Ssed_3640 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475372.1 4435448 R 425104 CDS YP_001475373.1 157376773 5612744 complement(4436362..4437015) 1 NC_009831.1 KEGG: spc:Sputcn32_2890 metallophosphoesterase; metallophosphoesterase 4437015 5612744 Ssed_3641 Shewanella sediminis HAW-EB3 metallophosphoesterase YP_001475373.1 4436362 R 425104 CDS YP_001475374.1 157376774 5612745 4437392..4438018 1 NC_009831.1 KEGG: ppr:PBPRB0191 hypothetical protein; hypothetical protein 4438018 5612745 Ssed_3642 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475374.1 4437392 D 425104 CDS YP_001475375.1 157376775 5612746 complement(4438099..4438680) 1 NC_009831.1 KEGG: she:Shewmr4_1157 transcriptional regulator, TetR family; TetR family transcriptional regulator 4438680 5612746 Ssed_3643 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001475375.1 4438099 R 425104 CDS YP_001475376.1 157376776 5612765 4438822..4439874 1 NC_009831.1 KEGG: ppr:PBPRB1366 NADH-dependent flavin oxidoreductase; NADH-dependent flavin oxidoreductase 4439874 5612765 Ssed_3644 Shewanella sediminis HAW-EB3 NADH-dependent flavin oxidoreductase YP_001475376.1 4438822 D 425104 CDS YP_001475377.1 157376777 5612766 complement(4440035..4441381) 1 NC_009831.1 KEGG: cps:CPS_1338 glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 4441381 5612766 Ssed_3645 Shewanella sediminis HAW-EB3 glutamate-1-semialdehyde-2,1-aminomutase YP_001475377.1 4440035 R 425104 CDS YP_001475378.1 157376778 5612767 complement(4441836..4443080) 1 NC_009831.1 KEGG: mag:amb3711 hypothetical protein; hypothetical protein 4443080 5612767 Ssed_3646 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475378.1 4441836 R 425104 CDS YP_001475379.1 157376779 5612923 4443521..4445563 1 NC_009831.1 KEGG: cps:CPS_0147 hydrolase, alpha/beta fold family; alpha/beta fold family hydrolase 4445563 5612923 Ssed_3647 Shewanella sediminis HAW-EB3 alpha/beta fold family hydrolase YP_001475379.1 4443521 D 425104 CDS YP_001475380.1 157376780 5612924 complement(4445692..4446123) 1 NC_009831.1 KEGG: sbl:Sbal_0639 hypothetical protein; hypothetical protein 4446123 5612924 Ssed_3648 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475380.1 4445692 R 425104 CDS YP_001475381.1 157376781 5612925 complement(4446255..4447106) 1 NC_009831.1 KEGG: sdn:Sden_0674 hypothetical protein; hypothetical protein 4447106 5612925 Ssed_3649 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475381.1 4446255 R 425104 CDS YP_001475382.1 157376782 5612926 4447919..4449370 1 NC_009831.1 KEGG: vvu:VV2_0918 hypothetical protein; hypothetical protein 4449370 5612926 Ssed_3650 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475382.1 4447919 D 425104 CDS YP_001475383.1 157376783 5612787 complement(4449442..4449681) 1 NC_009831.1 KEGG: sbl:Sbal_0642 hypothetical protein; hypothetical protein 4449681 5612787 Ssed_3651 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475383.1 4449442 R 425104 CDS YP_001475384.1 157376784 5612788 complement(4449924..4450997) 1 NC_009831.1 KEGG: shn:Shewana3_1536 hypothetical protein; hypothetical protein 4450997 5612788 Ssed_3652 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475384.1 4449924 R 425104 CDS YP_001475385.1 157376785 5612789 complement(4451668..4453221) 1 NC_009831.1 KEGG: shn:Shewana3_0658 cytochrome c552; nitrite reductase 4453221 5612789 Ssed_3653 Shewanella sediminis HAW-EB3 nitrite reductase YP_001475385.1 4451668 R 425104 CDS YP_001475386.1 157376786 5612790 4454310..4455041 1 NC_009831.1 KEGG: vvy:VVA0211 uridine phosphorylase; uridine phosphorylase 4455041 5612790 Ssed_3654 Shewanella sediminis HAW-EB3 uridine phosphorylase YP_001475386.1 4454310 D 425104 CDS YP_001475387.1 157376787 5612919 complement(4455239..4455487) 1 NC_009831.1 KEGG: shw:Sputw3181_0739 hypothetical protein; hypothetical protein 4455487 5612919 Ssed_3655 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475387.1 4455239 R 425104 CDS YP_001475388.1 157376788 5612920 complement(4455768..4456874) 1 NC_009831.1 KEGG: vfi:VFA0004 tripeptidase T; tripeptidase T 4456874 5612920 Ssed_3656 Shewanella sediminis HAW-EB3 tripeptidase T YP_001475388.1 4455768 R 425104 CDS YP_001475389.1 157376789 5612921 4457154..4457591 1 NC_009831.1 KEGG: slo:Shew_3055 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 4457591 5612921 Ssed_3657 Shewanella sediminis HAW-EB3 zinc-binding CMP/dCMP deaminase YP_001475389.1 4457154 D 425104 CDS YP_001475390.1 157376790 5612922 4458251..4461403 1 NC_009831.1 KEGG: mac:MA3492 hypothetical protein; nucleoside phosphorylase-like protein 4461403 5612922 Ssed_3658 Shewanella sediminis HAW-EB3 nucleoside phosphorylase-like protein YP_001475390.1 4458251 D 425104 CDS YP_001475391.1 157376791 5612983 4461513..4462556 1 NC_009831.1 KEGG: shn:Shewana3_3200 protein of unknown function DUF1568; hypothetical protein 4462556 5612983 Ssed_3659 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475391.1 4461513 D 425104 CDS YP_001475392.1 157376792 5612984 4463816..4464220 1 NC_009831.1 hypothetical protein 4464220 5612984 Ssed_3660 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475392.1 4463816 D 425104 CDS YP_001475393.1 157376793 5612985 4464360..4464839 1 NC_009831.1 KEGG: sfr:Sfri_2281 cation antiporter; cation antiporter 4464839 5612985 Ssed_3661 Shewanella sediminis HAW-EB3 cation antiporter YP_001475393.1 4464360 D 425104 CDS YP_001475394.1 157376794 5612986 4464869..4465129 1 NC_009831.1 KEGG: hne:HNE_0730 monovalent cation/proton antiporter, MnhF/PhaF family; MnhF/PhaF family monovalent cation/proton antiporter 4465129 5612986 Ssed_3662 Shewanella sediminis HAW-EB3 MnhF/PhaF family monovalent cation/proton antiporter YP_001475394.1 4464869 D 425104 CDS YP_001475395.1 157376795 5613291 4465126..4465467 1 NC_009831.1 KEGG: hne:HNE_0731 monovalent cation/proton antiporter, MnhG/PhaG family; multisubunit Na+/H+ antiporter MnhG subunit-like protein 4465467 5613291 Ssed_3663 Shewanella sediminis HAW-EB3 multisubunit Na+/H+ antiporter MnhG subunit-like protein YP_001475395.1 4465126 D 425104 CDS YP_001475396.1 157376796 5613292 4465515..4466519 1 NC_009831.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 4466519 5613292 Ssed_3664 Shewanella sediminis HAW-EB3 monovalent cation/H+ antiporter subunit B YP_001475396.1 4465515 D 425104 CDS YP_001475397.1 157376797 5613293 4466519..4466887 1 NC_009831.1 KEGG: rru:Rru_A1636 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L 4466887 5613293 Ssed_3665 Shewanella sediminis HAW-EB3 NADH-ubiquinone oxidoreductase, chain 4L YP_001475397.1 4466519 D 425104 CDS YP_001475398.1 157376798 5613294 4466881..4468359 1 NC_009831.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 4468359 5613294 Ssed_3666 Shewanella sediminis HAW-EB3 monovalent cation/H+ antiporter subunit D YP_001475398.1 4466881 D 425104 CDS YP_001475399.1 157376799 5613791 4468356..4469846 1 NC_009831.1 KEGG: rba:RB1430 NADH-ubiquinone oxidoreductase subunit; NADH dehydrogenase (quinone) 4469846 5613791 Ssed_3667 Shewanella sediminis HAW-EB3 NADH dehydrogenase (quinone) YP_001475399.1 4468356 D 425104 CDS YP_001475400.1 157376800 5613792 4469836..4470222 1 NC_009831.1 hypothetical protein 4470222 5613792 Ssed_3668 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475400.1 4469836 D 425104 CDS YP_001475401.1 157376801 5613793 4470209..4471909 1 NC_009831.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit D 4471909 5613793 Ssed_3669 Shewanella sediminis HAW-EB3 monovalent cation/H+ antiporter subunit D YP_001475401.1 4470209 D 425104 CDS YP_001475402.1 157376802 5613650 4472036..4472722 1 NC_009831.1 KEGG: hch:HCH_01378 transposase and inactivated derivatives; transposase and inactivated derivatives 4472722 5613650 Ssed_3670 Shewanella sediminis HAW-EB3 transposase and inactivated derivatives YP_001475402.1 4472036 D 425104 CDS YP_001475403.1 157376803 5613651 4473114..4474556 1 NC_009831.1 KEGG: azo:azo2326 conserved hypothetical signaling protein; signaling protein 4474556 5613651 Ssed_3671 Shewanella sediminis HAW-EB3 signaling protein YP_001475403.1 4473114 D 425104 CDS YP_001475404.1 157376804 5613652 complement(4474754..4475188) 1 NC_009831.1 KEGG: slo:Shew_3059 hypothetical protein; hypothetical protein 4475188 5613652 Ssed_3672 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475404.1 4474754 R 425104 CDS YP_001475405.1 157376805 5613653 complement(4476116..4479004) 1 NC_009831.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 4479004 5613653 Ssed_3673 Shewanella sediminis HAW-EB3 glycine dehydrogenase YP_001475405.1 4476116 R 425104 CDS YP_001475406.1 157376806 5613831 complement(4479158..4479547) 1 NC_009831.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 4479547 5613831 Ssed_3674 Shewanella sediminis HAW-EB3 glycine cleavage system protein H YP_001475406.1 4479158 R 425104 CDS YP_001475407.1 157376807 5613832 complement(4479956..4481050) 1 NC_009831.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 4481050 gcvT 5613832 gcvT Shewanella sediminis HAW-EB3 glycine cleavage system aminomethyltransferase T YP_001475407.1 4479956 R 425104 CDS YP_001475408.1 157376808 5613833 complement(4481364..4482578) 1 NC_009831.1 KEGG: slo:Shew_3065 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 4482578 5613833 Ssed_3676 Shewanella sediminis HAW-EB3 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001475408.1 4481364 R 425104 CDS YP_001475409.1 157376809 5613834 complement(4482635..4483882) 1 NC_009831.1 KEGG: slo:Shew_3066 2-polyprenyl-6-methoxyphenol 4-hydroxylase; 2-polyprenyl-6-methoxyphenol 4-hydroxylase 4483882 5613834 Ssed_3677 Shewanella sediminis HAW-EB3 2-polyprenyl-6-methoxyphenol 4-hydroxylase YP_001475409.1 4482635 R 425104 CDS YP_001475410.1 157376810 5613489 complement(4484018..4484584) 1 NC_009831.1 KEGG: slo:Shew_3067 YecA family protein; hypothetical protein 4484584 5613489 Ssed_3678 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475410.1 4484018 R 425104 CDS YP_001475411.1 157376811 5613490 4485166..4485474 1 NC_009831.1 KEGG: slo:Shew_3068 protein of unknown function DUF710; hypothetical protein 4485474 5613490 Ssed_3679 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475411.1 4485166 D 425104 CDS YP_001475412.1 157376812 5613491 complement(4485951..4486199) 1 NC_009831.1 KEGG: sdn:Sden_0464 hypothetical protein; hypothetical protein 4486199 5613491 Ssed_3680 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475412.1 4485951 R 425104 CDS YP_001475413.1 157376813 5613492 complement(4486199..4486393) 1 NC_009831.1 KEGG: ban:BA1483 purine nucleoside phosphorylase; purine nucleoside phosphorylase 4486393 5613492 Ssed_3681 Shewanella sediminis HAW-EB3 purine nucleoside phosphorylase YP_001475413.1 4486199 R 425104 CDS YP_001475414.1 157376814 5613965 complement(4486493..4486909) 1 NC_009831.1 KEGG: vco:VC0395_0083 purine nucleoside phosphorylase; purine nucleoside phosphorylase 4486909 5613965 Ssed_3682 Shewanella sediminis HAW-EB3 purine nucleoside phosphorylase YP_001475414.1 4486493 R 425104 CDS YP_001475415.1 157376815 5613966 4487017..4487679 1 NC_009831.1 KEGG: son:SO4298 cyclic nucleotide binding protein; cyclic nucleotide binding protein 4487679 5613966 Ssed_3683 Shewanella sediminis HAW-EB3 cyclic nucleotide binding protein YP_001475415.1 4487017 D 425104 CDS YP_001475416.1 157376816 5613967 complement(4487787..4488179) 1 NC_009831.1 hypothetical protein 4488179 5613967 Ssed_3684 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475416.1 4487787 R 425104 CDS YP_001475417.1 157376817 5613968 4488420..4489160 1 NC_009831.1 KEGG: hch:HCH_03036 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase-like protein 4489160 5613968 Ssed_3685 Shewanella sediminis HAW-EB3 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase-like protein YP_001475417.1 4488420 D 425104 CDS YP_001475418.1 157376818 5614179 4489190..4489915 1 NC_009831.1 KEGG: slo:Shew_3069 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 4489915 5614179 Ssed_3686 Shewanella sediminis HAW-EB3 5-formyltetrahydrofolate cyclo-ligase YP_001475418.1 4489190 D 425104 CDS YP_001475419.1 157376819 5614180 4489964..4490482 1 NC_009831.1 KEGG: shn:Shewana3_1389 lipoprotein; lipoprotein 4490482 5614180 Ssed_3687 Shewanella sediminis HAW-EB3 lipoprotein YP_001475419.1 4489964 D 425104 CDS YP_001475420.1 157376820 5614181 complement(4490466..4491134) 1 NC_009831.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 4491134 5614181 Ssed_3688 Shewanella sediminis HAW-EB3 uracil-DNA glycosylase YP_001475420.1 4490466 R 425104 CDS YP_001475421.1 157376821 5614182 4491369..4491929 1 NC_009831.1 KEGG: slo:Shew_3074 pilin; pilin 4491929 5614182 Ssed_3689 Shewanella sediminis HAW-EB3 pilin YP_001475421.1 4491369 D 425104 CDS YP_001475422.1 157376822 5613990 4492008..4492565 1 NC_009831.1 KEGG: sfr:Sfri_3092 methylation site containing protein; methylation site containing protein 4492565 5613990 Ssed_3690 Shewanella sediminis HAW-EB3 methylation site containing protein YP_001475422.1 4492008 D 425104 CDS YP_001475423.1 157376823 5613991 4493018..4493317 1 NC_009831.1 KEGG: slo:Shew_3075 hypothetical protein; hypothetical protein 4493317 5613991 Ssed_3691 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475423.1 4493018 D 425104 CDS YP_001475424.1 157376824 5613992 complement(4493653..4494309) 1 NC_009831.1 KEGG: she:Shewmr4_0890 lysine exporter protein (LysE/YggA); lysine exporter protein (LysE/YggA) 4494309 5613992 Ssed_3692 Shewanella sediminis HAW-EB3 lysine exporter protein (LysE/YggA) YP_001475424.1 4493653 R 425104 CDS YP_001475425.1 157376825 5614084 4494482..4495942 1 NC_009831.1 KEGG: shm:Shewmr7_3135 transcriptional regulator, fis family; Fis family transcriptional regulator 4495942 5614084 Ssed_3693 Shewanella sediminis HAW-EB3 Fis family transcriptional regulator YP_001475425.1 4494482 D 425104 CDS YP_001475426.1 157376826 5614085 4496154..4497599 1 NC_009831.1 KEGG: shn:Shewana3_3228 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4497599 5614085 Ssed_3694 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475426.1 4496154 D 425104 CDS YP_001475427.1 157376827 5614086 4498134..4499738 1 NC_009831.1 KEGG: shm:Shewmr7_3139 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 4499738 5614086 Ssed_3695 Shewanella sediminis HAW-EB3 AMP-dependent synthetase/ligase YP_001475427.1 4498134 D 425104 CDS YP_001475428.1 157376828 5614087 complement(4499913..4500944) 1 NC_009831.1 KEGG: rpe:RPE_4616 alpha/beta hydrolase; alpha/beta hydrolase 4500944 5614087 Ssed_3696 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001475428.1 4499913 R 425104 CDS YP_001475429.1 157376829 5613584 complement(4500970..4501419) 1 NC_009831.1 hypothetical protein 4501419 5613584 Ssed_3697 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475429.1 4500970 R 425104 CDS YP_001475430.1 157376830 5613585 complement(4501527..4503440) 1 NC_009831.1 KEGG: slo:Shew_3087 lipid A ABC exporter family, fused ATPase and inner membrane subunits; lipid ABC transporter ATPase/inner membrane protein 4503440 5613585 Ssed_3698 Shewanella sediminis HAW-EB3 lipid ABC transporter ATPase/inner membrane protein YP_001475430.1 4501527 R 425104 CDS YP_001475431.1 157376831 5613586 4503622..4503948 1 NC_009831.1 KEGG: slo:Shew_3089 hypothetical protein; hypothetical protein 4503948 5613586 Ssed_3699 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475431.1 4503622 D 425104 CDS YP_001475432.1 157376832 5613587 complement(4504052..4504927) 1 NC_009831.1 KEGG: pha:PSHAb0529 cation transporter component; cation transporter component 4504927 5613587 Ssed_3700 Shewanella sediminis HAW-EB3 cation transporter component YP_001475432.1 4504052 R 425104 CDS YP_001475433.1 157376833 5610139 complement(4505557..4505847) 1 NC_009831.1 KEGG: shw:Sputw3181_0969 hypothetical protein; hypothetical protein 4505847 5610139 Ssed_3701 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475433.1 4505557 R 425104 CDS YP_001475434.1 157376834 5610140 4506028..4506714 1 NC_009831.1 KEGG: slo:Shew_3091 membrane-flanked domain protein; membrane-flanked domain-containing protein 4506714 5610140 Ssed_3702 Shewanella sediminis HAW-EB3 membrane-flanked domain-containing protein YP_001475434.1 4506028 D 425104 CDS YP_001475435.1 157376835 5610141 4506716..4508257 1 NC_009831.1 KEGG: slo:Shew_3092 membrane-flanked domain protein; membrane-flanked domain-containing protein 4508257 5610141 Ssed_3703 Shewanella sediminis HAW-EB3 membrane-flanked domain-containing protein YP_001475435.1 4506716 D 425104 CDS YP_001475436.1 157376836 5610142 4508413..4509033 1 NC_009831.1 KEGG: slo:Shew_3093 protein of unknown function DUF924; hypothetical protein 4509033 5610142 Ssed_3704 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475436.1 4508413 D 425104 CDS YP_001475437.1 157376837 5610856 complement(4509140..4510765) 1 NC_009831.1 KEGG: shn:Shewana3_3173 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4510765 5610856 Ssed_3705 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001475437.1 4509140 R 425104 CDS YP_001475438.1 157376838 5610857 complement(4511174..4511605) 1 NC_009831.1 KEGG: sfr:Sfri_0938 UspA domain protein; UspA domain-containing protein 4511605 5610857 Ssed_3706 Shewanella sediminis HAW-EB3 UspA domain-containing protein YP_001475438.1 4511174 R 425104 CDS YP_001475439.1 157376839 5610858 complement(4511899..4513116) 1 NC_009831.1 KEGG: cps:CPS_3594 beta-ketoadipyl CoA thiolase; beta-ketoadipyl CoA thiolase 4513116 5610858 Ssed_3707 Shewanella sediminis HAW-EB3 beta-ketoadipyl CoA thiolase YP_001475439.1 4511899 R 425104 CDS YP_001475440.1 157376840 5610859 complement(4513118..4514509) 1 NC_009831.1 KEGG: cps:CPS_3593 glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 4514509 5610859 Ssed_3708 Shewanella sediminis HAW-EB3 glutamate-1-semialdehyde-2,1-aminomutase YP_001475440.1 4513118 R 425104 CDS YP_001475441.1 157376841 5612054 complement(4514616..4515326) 1 NC_009831.1 KEGG: cps:CPS_3592 3-oxoadipate CoA-transferase, beta subunit; 3-oxoadipate CoA-transferase 4515326 5612054 Ssed_3709 Shewanella sediminis HAW-EB3 3-oxoadipate CoA-transferase YP_001475441.1 4514616 R 425104 CDS YP_001475442.1 157376842 5612055 complement(4515323..4516033) 1 NC_009831.1 KEGG: cps:CPS_3591 3-oxoadipate CoA-transferase, alpha subunit; 3-oxoacid CoA-transferase 4516033 5612055 Ssed_3710 Shewanella sediminis HAW-EB3 3-oxoacid CoA-transferase YP_001475442.1 4515323 R 425104 CDS YP_001475443.1 157376843 5612056 complement(4516053..4517534) 1 NC_009831.1 KEGG: cps:CPS_3603 hypothetical protein; hypothetical protein 4517534 5612056 Ssed_3711 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475443.1 4516053 R 425104 CDS YP_001475444.1 157376844 5612057 4518181..4519026 1 NC_009831.1 KEGG: hch:HCH_06121 transcriptional regulator; transcriptional regulator 4519026 5612057 Ssed_3712 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001475444.1 4518181 D 425104 CDS YP_001475445.1 157376845 5613828 complement(4519294..4519737) 1 NC_009831.1 KEGG: slo:Shew_3100 UspA domain protein; UspA domain-containing protein 4519737 5613828 Ssed_3713 Shewanella sediminis HAW-EB3 UspA domain-containing protein YP_001475445.1 4519294 R 425104 CDS YP_001475446.1 157376846 5613829 complement(4519829..4520260) 1 NC_009831.1 KEGG: son:SO3681 universal stress protein family; universal stress protein 4520260 5613829 Ssed_3714 Shewanella sediminis HAW-EB3 universal stress protein YP_001475446.1 4519829 R 425104 CDS YP_001475447.1 157376847 5613830 complement(4520372..4520749) 1 NC_009831.1 KEGG: slo:Shew_3102 hypothetical protein; hypothetical protein 4520749 5613830 Ssed_3715 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475447.1 4520372 R 425104 CDS YP_001475448.1 157376848 5610264 4521134..4522564 1 NC_009831.1 KEGG: son:SO3683 coniferyl aldehyde dehydrogenase; coniferyl aldehyde dehydrogenase 4522564 5610264 Ssed_3716 Shewanella sediminis HAW-EB3 coniferyl aldehyde dehydrogenase YP_001475448.1 4521134 D 425104 CDS YP_001475449.1 157376849 5610265 4522673..4523248 1 NC_009831.1 KEGG: slo:Shew_3104 transcriptional regulator, TetR family; TetR family transcriptional regulator 4523248 5610265 Ssed_3717 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001475449.1 4522673 D 425104 CDS YP_001475450.1 157376850 5610266 complement(4523761..4525131) 1 NC_009831.1 KEGG: slo:Shew_0727 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4525131 5610266 Ssed_3718 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001475450.1 4523761 R 425104 CDS YP_001475451.1 157376851 5610267 complement(4525150..4526649) 1 NC_009831.1 KEGG: slo:Shew_0726 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 4526649 5610267 Ssed_3719 Shewanella sediminis HAW-EB3 two component, sigma54 specific, Fis family transcriptional regulator YP_001475451.1 4525150 R 425104 CDS YP_001475452.1 157376852 5610540 complement(4526861..4528072) 1 NC_009831.1 KEGG: shm:Shewmr7_3157 protein of unknown function DUF214; hypothetical protein 4528072 5610540 Ssed_3720 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475452.1 4526861 R 425104 CDS YP_001475453.1 157376853 5610541 complement(4528091..4529392) 1 NC_009831.1 KEGG: shn:Shewana3_3259 protein of unknown function DUF214; hypothetical protein 4529392 5610541 Ssed_3721 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475453.1 4528091 R 425104 CDS YP_001475454.1 157376854 5610542 complement(4529404..4530195) 1 NC_009831.1 KEGG: shn:Shewana3_3260 ABC transporter related; ABC transporter 4530195 5610542 Ssed_3722 Shewanella sediminis HAW-EB3 ABC transporter YP_001475454.1 4529404 R 425104 CDS YP_001475455.1 157376855 5610543 complement(4530304..4530597) 1 NC_009831.1 KEGG: sbl:Sbal_3342 hypothetical protein; hypothetical protein 4530597 5610543 Ssed_3723 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475455.1 4530304 R 425104 CDS YP_001475456.1 157376856 5610666 complement(4530608..4531870) 1 NC_009831.1 KEGG: slo:Shew_0721 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4531870 5610666 Ssed_3724 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001475456.1 4530608 R 425104 CDS YP_001475457.1 157376857 5610667 complement(4532225..4532704) 1 NC_009831.1 KEGG: slo:Shew_0731 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 4532704 5610667 Ssed_3725 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475457.1 4532225 R 425104 CDS YP_001475458.1 157376858 5610668 complement(4532750..4533211) 1 NC_009831.1 KEGG: slo:Shew_0730 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 4533211 5610668 Ssed_3726 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475458.1 4532750 R 425104 CDS YP_001475459.1 157376859 5610669 complement(4533345..4534997) 1 NC_009831.1 KEGG: aha:AHA_1691 NADH dehydrogenase; NADH dehydrogenase 4534997 5610669 Ssed_3727 Shewanella sediminis HAW-EB3 NADH dehydrogenase YP_001475459.1 4533345 R 425104 CDS YP_001475460.1 157376860 5611544 complement(4535308..4535691) 1 NC_009831.1 KEGG: shn:Shewana3_3269 hypothetical protein; hypothetical protein 4535691 5611544 Ssed_3728 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475460.1 4535308 R 425104 CDS YP_001475461.1 157376861 5611545 complement(4535845..4536729) 1 NC_009831.1 KEGG: shn:Shewana3_3272 periplasmic binding protein; periplasmic binding protein 4536729 5611545 Ssed_3729 Shewanella sediminis HAW-EB3 periplasmic binding protein YP_001475461.1 4535845 R 425104 CDS YP_001475462.1 157376862 5610288 complement(4537471..4538085) 1 NC_009831.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 4538085 5610288 Ssed_3730 Shewanella sediminis HAW-EB3 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_001475462.1 4537471 R 425104 CDS YP_001475463.1 157376863 5611547 complement(4538146..4539810) 1 NC_009831.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 4539810 5611547 Ssed_3731 Shewanella sediminis HAW-EB3 cobyric acid synthase YP_001475463.1 4538146 R 425104 CDS YP_001475464.1 157376864 5614183 complement(4539952..4540551) 1 NC_009831.1 KEGG: slo:Shew_0716 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 4540551 5614183 Ssed_3732 Shewanella sediminis HAW-EB3 cobalbumin biosynthesis protein YP_001475464.1 4539952 R 425104 CDS YP_001475465.1 157376865 5614184 complement(4540548..4541321) 1 NC_009831.1 KEGG: slo:Shew_0715 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 4541321 5614184 Ssed_3733 Shewanella sediminis HAW-EB3 cobalamin 5'-phosphate synthase YP_001475465.1 4540548 R 425104 CDS YP_001475466.1 157376866 5614185 complement(4541429..4542457) 1 NC_009831.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4542457 cobT 5614185 cobT Shewanella sediminis HAW-EB3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001475466.1 4541429 R 425104 CDS YP_001475467.1 157376867 5610042 complement(4542688..4543818) 1 NC_009831.1 KEGG: sbl:Sbal_3365 transport system permease; transport system permease 4543818 5610042 Ssed_3735 Shewanella sediminis HAW-EB3 transport system permease YP_001475467.1 4542688 R 425104 CDS YP_001475468.1 157376868 5610043 complement(4543808..4544743) 1 NC_009831.1 KEGG: slo:Shew_0712 ABC transporter-related protein; ABC transporter-like protein 4544743 5610043 Ssed_3736 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001475468.1 4543808 R 425104 CDS YP_001475469.1 157376869 5610044 complement(4545901..4546587) 1 NC_009831.1 KEGG: slo:Shew_0711 phosphoglycerate mutase; phosphoglycerate mutase 4546587 5610044 Ssed_3737 Shewanella sediminis HAW-EB3 phosphoglycerate mutase YP_001475469.1 4545901 R 425104 CDS YP_001475470.1 157376870 5610045 complement(4546732..4549584) 1 NC_009831.1 KEGG: sfu:Sfum_0294 multi-sensor signal transduction histidine kinase; Na+/proline symporter-like protein 4549584 5610045 Ssed_3738 Shewanella sediminis HAW-EB3 Na+/proline symporter-like protein YP_001475470.1 4546732 R 425104 CDS YP_001475471.1 157376871 5611227 4550071..4553829 1 NC_009831.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4553829 metH 5611227 metH Shewanella sediminis HAW-EB3 B12-dependent methionine synthase YP_001475471.1 4550071 D 425104 CDS YP_001475472.1 157376872 5611228 4554863..4555117 1 NC_009831.1 KEGG: sfr:Sfri_1438 hypothetical protein; hypothetical protein 4555117 5611228 Ssed_3740 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475472.1 4554863 D 425104 CDS YP_001475473.1 157376873 5611229 complement(4555305..4556390) 1 NC_009831.1 KEGG: gfo:GFO_0080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4556390 5611229 Ssed_3741 Shewanella sediminis HAW-EB3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001475473.1 4555305 R 425104 CDS YP_001475474.1 157376874 5611230 complement(4556551..4557429) 1 NC_009831.1 KEGG: ppr:PBPRB1418 hypothetical transcriptional regulator; transcriptional regulator 4557429 5611230 Ssed_3742 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001475474.1 4556551 R 425104 CDS YP_001475475.1 157376875 5609740 4557512..4557964 1 NC_009831.1 KEGG: ppr:PBPRB1419 hypothetical membrane protein; hypothetical protein 4557964 5609740 Ssed_3743 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475475.1 4557512 D 425104 CDS YP_001475476.1 157376876 5609741 complement(4558047..4559768) 1 NC_009831.1 KEGG: slo:Shew_0844 nitrite reductase (cytochrome; ammonia-forming); nitrite reductase 4559768 5609741 Ssed_3744 Shewanella sediminis HAW-EB3 nitrite reductase YP_001475476.1 4558047 R 425104 CDS YP_001475477.1 157376877 5609742 4560472..4560717 1 NC_009831.1 KEGG: sdn:Sden_0577 hypothetical protein; hypothetical protein 4560717 5609742 Ssed_3745 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475477.1 4560472 D 425104 CDS YP_001475478.1 157376878 5609743 complement(4561350..4563953) 1 NC_009831.1 KEGG: sdn:Sden_2877 protein-P-II uridylyltransferase; (protein-PII) uridylyltransferase 4563953 5609743 Ssed_3746 Shewanella sediminis HAW-EB3 (protein-PII) uridylyltransferase YP_001475478.1 4561350 R 425104 CDS YP_001475479.1 157376879 5612232 complement(4564614..4565819) 1 NC_009831.1 hypothetical protein 4565819 5612232 Ssed_3747 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475479.1 4564614 R 425104 CDS YP_001475480.1 157376880 5612233 complement(4566540..4567574) 1 NC_009831.1 hypothetical protein 4567574 5612233 Ssed_3748 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475480.1 4566540 R 425104 CDS YP_001475481.1 157376881 5612234 complement(4567794..4569512) 1 NC_009831.1 KEGG: rha:RHA1_ro05345 hypothetical protein; hypothetical protein 4569512 5612234 Ssed_3749 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475481.1 4567794 R 425104 CDS YP_001475482.1 157376882 5612235 complement(4569523..4570470) 1 NC_009831.1 KEGG: neu:NE1183 serine protease, subtilase family; serine protease 4570470 5612235 Ssed_3750 Shewanella sediminis HAW-EB3 serine protease YP_001475482.1 4569523 R 425104 CDS YP_001475483.1 157376883 5610169 complement(4570685..4571113) 1 NC_009831.1 KEGG: cth:Cthe_2456 nuclease; nuclease 4571113 5610169 Ssed_3751 Shewanella sediminis HAW-EB3 nuclease YP_001475483.1 4570685 R 425104 CDS YP_001475484.1 157376884 5610170 4572054..4572347 1 NC_009831.1 KEGG: ppd:Ppro_2995 TM2 domain containing protein+B7201; TM2 domain-containing protein 4572347 5610170 Ssed_3752 Shewanella sediminis HAW-EB3 TM2 domain-containing protein YP_001475484.1 4572054 D 425104 CDS YP_001475485.1 157376885 5610171 4572832..4573485 1 NC_009831.1 KEGG: ppr:PBPRA1656 glutathione S-transferase; glutathione S-transferase 4573485 5610171 Ssed_3753 Shewanella sediminis HAW-EB3 glutathione S-transferase YP_001475485.1 4572832 D 425104 CDS YP_001475486.1 157376886 5610172 complement(4573569..4575812) 1 NC_009831.1 KEGG: pin:Ping_1301 peptidase U32; peptidase U32 4575812 5610172 Ssed_3754 Shewanella sediminis HAW-EB3 peptidase U32 YP_001475486.1 4573569 R 425104 CDS YP_001475487.1 157376887 5609824 complement(4576001..4576249) 1 NC_009831.1 hypothetical protein 4576249 5609824 Ssed_3755 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475487.1 4576001 R 425104 CDS YP_001475488.1 157376888 5609825 4576624..4577790 1 NC_009831.1 KEGG: shw:Sputw3181_3335 peptidase M19, renal dipeptidase; peptidase M19 4577790 5609825 Ssed_3756 Shewanella sediminis HAW-EB3 peptidase M19 YP_001475488.1 4576624 D 425104 CDS YP_001475489.1 157376889 5609826 complement(4577823..4578500) 1 NC_009831.1 KEGG: cps:CPS_4923 oxidoreductase, 2OG-Fe(II) oxygenase family; 2OG-Fe(II) oxygenase 4578500 5609826 Ssed_3757 Shewanella sediminis HAW-EB3 2OG-Fe(II) oxygenase YP_001475489.1 4577823 R 425104 CDS YP_001475490.1 157376890 5609827 complement(4578775..4580028) 1 NC_009831.1 KEGG: gme:Gmet_0142 hypothetical protein; hypothetical protein 4580028 5609827 Ssed_3758 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475490.1 4578775 R 425104 CDS YP_001475491.1 157376891 5612658 complement(4580243..4581907) 1 NC_009831.1 KEGG: slo:Shew_0808 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4581907 5612658 Ssed_3759 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001475491.1 4580243 R 425104 CDS YP_001475492.1 157376892 5612659 4583252..4583989 1 NC_009831.1 KEGG: shw:Sputw3181_0918 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4583989 5612659 Ssed_3760 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001475492.1 4583252 D 425104 CDS YP_001475493.1 157376893 5612660 4583997..4584677 1 NC_009831.1 KEGG: slo:Shew_3165 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 4584677 5612660 Ssed_3761 Shewanella sediminis HAW-EB3 polar amino acid ABC transporter inner membrane subunit YP_001475493.1 4583997 D 425104 CDS YP_001475494.1 157376894 5610159 4584670..4585395 1 NC_009831.1 KEGG: slo:Shew_3164 ABC transporter-related protein; ABC transporter-like protein 4585395 5610159 Ssed_3762 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001475494.1 4584670 D 425104 CDS YP_001475495.1 157376895 5610160 complement(4585578..4586237) 1 NC_009831.1 KEGG: pfa:PF11_0035 hypothetical protein; hypothetical protein 4586237 5610160 Ssed_3763 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475495.1 4585578 R 425104 CDS YP_001475496.1 157376896 5610161 complement(4586599..4586964) 1 NC_009831.1 KEGG: slo:Shew_0703 response regulator receiver protein; response regulator receiver protein 4586964 5610161 Ssed_3764 Shewanella sediminis HAW-EB3 response regulator receiver protein YP_001475496.1 4586599 R 425104 CDS YP_001475497.1 157376897 5610162 4587335..4587988 1 NC_009831.1 KEGG: pha:PSHAa0324 hypothetical protein; hypothetical protein 4587988 5610162 Ssed_3765 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475497.1 4587335 D 425104 CDS YP_001475498.1 157376898 5610224 complement(4588084..4588338) 1 NC_009831.1 hypothetical protein 4588338 5610224 Ssed_3766 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475498.1 4588084 R 425104 CDS YP_001475499.1 157376899 5610225 complement(4588364..4591273) 1 NC_009831.1 KEGG: pat:Patl_4039 sulfite reductase (NADPH) flavoprotein, alpha chain; sulfite reductase alpha subunit (flavoprotein)-like protein 4591273 5610225 Ssed_3767 Shewanella sediminis HAW-EB3 sulfite reductase alpha subunit (flavoprotein)-like protein YP_001475499.1 4588364 R 425104 CDS YP_001475500.1 157376900 5610226 complement(4591482..4591766) 1 NC_009831.1 hypothetical protein 4591766 5610226 Ssed_3768 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475500.1 4591482 R 425104 CDS YP_001475501.1 157376901 5610227 complement(4591769..4593175) 1 NC_009831.1 KEGG: dsy:DSY2839 tetrachloroethene dehalogenase; hypothetical protein 4593175 5610227 Ssed_3769 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475501.1 4591769 R 425104 CDS YP_001475502.1 157376902 5610120 complement(4593262..4594233) 1 NC_009831.1 KEGG: ppr:PBPRB1899 hypothetical protein; hypothetical protein 4594233 5610120 Ssed_3770 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475502.1 4593262 R 425104 CDS YP_001475503.1 157376903 5610121 4594648..4595529 1 NC_009831.1 KEGG: slo:Shew_0700 pirin domain protein domain protein; pirin 4595529 5610121 Ssed_3771 Shewanella sediminis HAW-EB3 pirin YP_001475503.1 4594648 D 425104 CDS YP_001475504.1 157376904 5610122 complement(4595762..4597243) 1 NC_009831.1 KEGG: rsp:RSP_2375 hypothetical protein; hypothetical protein 4597243 5610122 Ssed_3772 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475504.1 4595762 R 425104 CDS YP_001475505.1 157376905 5610123 4597638..4598702 1 NC_009831.1 KEGG: pol:Bpro_4842 beta-lactamase-like; beta-lactamase-like protein 4598702 5610123 Ssed_3773 Shewanella sediminis HAW-EB3 beta-lactamase-like protein YP_001475505.1 4597638 D 425104 CDS YP_001475506.1 157376906 5610701 4598893..4599150 1 NC_009831.1 KEGG: slo:Shew_0695 protein of unknown function DUF331; hypothetical protein 4599150 5610701 Ssed_3774 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475506.1 4598893 D 425104 CDS YP_001475507.1 157376907 5610702 4599632..4600567 1 NC_009831.1 KEGG: slo:Shew_0694 protein of unknown function DUF6, transmembrane; hypothetical protein 4600567 5610702 Ssed_3775 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475507.1 4599632 D 425104 CDS YP_001475508.1 157376908 5610703 complement(4600869..4602152) 1 NC_009831.1 KEGG: slo:Shew_2121 diguanylate cyclase; diguanylate cyclase 4602152 5610703 Ssed_3776 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475508.1 4600869 R 425104 CDS YP_001475509.1 157376909 5610704 complement(4602285..4603280) 1 NC_009831.1 KEGG: slo:Shew_2120 hypothetical protein; hypothetical protein 4603280 5610704 Ssed_3777 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475509.1 4602285 R 425104 CDS YP_001475510.1 157376910 5609957 complement(4603411..4605300) 1 NC_009831.1 KEGG: reu:Reut_B4068 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; response regulator 4605300 5609957 Ssed_3778 Shewanella sediminis HAW-EB3 response regulator YP_001475510.1 4603411 R 425104 CDS YP_001475511.1 157376911 5609958 complement(4605633..4606121) 1 NC_009831.1 hypothetical protein 4606121 5609958 Ssed_3779 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475511.1 4605633 R 425104 CDS YP_001475512.1 157376912 5609959 complement(4607041..4607952) 1 NC_009831.1 KEGG: sbl:Sbal_3290 hypothetical protein; hypothetical protein 4607952 5609959 Ssed_3780 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475512.1 4607041 R 425104 CDS YP_001475513.1 157376913 5609960 complement(4607974..4609119) 1 NC_009831.1 KEGG: ppr:PBPRB1231 hypothetical protein; hypothetical protein 4609119 5609960 Ssed_3781 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475513.1 4607974 R 425104 CDS YP_001475514.1 157376914 5612558 4609297..4610559 1 NC_009831.1 KEGG: sbl:Sbal_2612 hypothetical protein; hypothetical protein 4610559 5612558 Ssed_3782 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475514.1 4609297 D 425104 CDS YP_001475515.1 157376915 5612559 complement(4610864..4612504) 1 NC_009831.1 KEGG: dps:DP2520 sensory transduction system, regulatory protein; sensory transduction system, regulatory protein 4612504 5612559 Ssed_3783 Shewanella sediminis HAW-EB3 sensory transduction system, regulatory protein YP_001475515.1 4610864 R 425104 CDS YP_001475516.1 157376916 5612560 complement(4612666..4614315) 1 NC_009831.1 KEGG: pca:Pcar_0095 sensory transduction system, regulatory protein; sensory transduction system, regulatory protein 4614315 5612560 Ssed_3784 Shewanella sediminis HAW-EB3 sensory transduction system, regulatory protein YP_001475516.1 4612666 R 425104 CDS YP_001475517.1 157376917 5612561 4614835..4615488 1 NC_009831.1 catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; dihydropteridine reductase 4615488 5612561 Ssed_3785 Shewanella sediminis HAW-EB3 dihydropteridine reductase YP_001475517.1 4614835 D 425104 CDS YP_001475518.1 157376918 5612848 4615644..4616303 1 NC_009831.1 KEGG: slo:Shew_0687 heat shock protein DnaJ domain protein; molecular chaperone DnaJ 4616303 5612848 Ssed_3786 Shewanella sediminis HAW-EB3 molecular chaperone DnaJ YP_001475518.1 4615644 D 425104 CDS YP_001475519.1 157376919 5612849 4616387..4617136 1 NC_009831.1 KEGG: slo:Shew_0686 DsbA oxidoreductase; DsbA oxidoreductase 4617136 5612849 Ssed_3787 Shewanella sediminis HAW-EB3 DsbA oxidoreductase YP_001475519.1 4616387 D 425104 CDS YP_001475520.1 157376920 5612850 complement(4617225..4618274) 1 NC_009831.1 KEGG: ana:all2291 glycosyltransferase; glycosyltransferase 4618274 5612850 Ssed_3788 Shewanella sediminis HAW-EB3 glycosyltransferase YP_001475520.1 4617225 R 425104 CDS YP_001475521.1 157376921 5612217 complement(4618351..4618887) 1 NC_009831.1 KEGG: she:Shewmr4_3065 hypothetical protein; hypothetical protein 4618887 5612217 Ssed_3789 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475521.1 4618351 R 425104 CDS YP_001475522.1 157376922 5612218 complement(4618986..4619513) 1 NC_009831.1 KEGG: slo:Shew_0678 protoporphyrinogen oxidase; protoporphyrinogen oxidase 4619513 5612218 Ssed_3790 Shewanella sediminis HAW-EB3 protoporphyrinogen oxidase YP_001475522.1 4618986 R 425104 CDS YP_001475523.1 157376923 5612219 complement(4619749..4621368) 1 NC_009831.1 KEGG: sfr:Sfri_0812 protein of unknown function DUF1111; hypothetical protein 4621368 5612219 Ssed_3791 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475523.1 4619749 R 425104 CDS YP_001475524.1 157376924 5612220 complement(4621516..4622670) 1 NC_009831.1 KEGG: slo:Shew_0676 lipoprotein; lipoprotein 4622670 5612220 Ssed_3792 Shewanella sediminis HAW-EB3 lipoprotein YP_001475524.1 4621516 R 425104 CDS YP_001475525.1 157376925 5612074 complement(4622732..4624129) 1 NC_009831.1 KEGG: slo:Shew_0675 hypothetical protein; hypothetical protein 4624129 5612074 Ssed_3793 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475525.1 4622732 R 425104 CDS YP_001475526.1 157376926 5612075 complement(4624607..4625467) 1 NC_009831.1 KEGG: lic:LIC10984 hypothetical protein; hypothetical protein 4625467 5612075 Ssed_3794 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475526.1 4624607 R 425104 CDS YP_001475527.1 157376927 5612076 4625710..4626900 1 NC_009831.1 KEGG: sbl:Sbal_3401 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4626900 5612076 Ssed_3795 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001475527.1 4625710 D 425104 CDS YP_001475528.1 157376928 5612077 4626961..4627794 1 NC_009831.1 KEGG: shw:Sputw3181_0906 hypothetical protein; hypothetical protein 4627794 5612077 Ssed_3796 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475528.1 4626961 D 425104 CDS YP_001475529.1 157376929 5613906 complement(4628120..4628929) 1 NC_009831.1 KEGG: sbl:Sbal_3409 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 4628929 5613906 Ssed_3797 Shewanella sediminis HAW-EB3 uroporphyrin-III C-methyltransferase YP_001475529.1 4628120 R 425104 CDS YP_001475530.1 157376930 5613907 4629600..4631144 1 NC_009831.1 KEGG: sbl:Sbal_3411 hypothetical protein; hypothetical protein 4631144 5613907 Ssed_3798 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475530.1 4629600 D 425104 CDS YP_001475531.1 157376931 5613908 4631286..4631633 1 NC_009831.1 hypothetical protein 4631633 5613908 Ssed_3799 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475531.1 4631286 D 425104 CDS YP_001475532.1 157376932 5613909 4631725..4632117 1 NC_009831.1 hypothetical protein 4632117 5613909 Ssed_3800 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475532.1 4631725 D 425104 CDS YP_001475533.1 157376933 5612039 4632181..4632708 1 NC_009831.1 KEGG: slo:Shew_0669 redoxin domain protein; redoxin domain-containing protein 4632708 5612039 Ssed_3801 Shewanella sediminis HAW-EB3 redoxin domain-containing protein YP_001475533.1 4632181 D 425104 CDS YP_001475534.1 157376934 5612040 complement(4632760..4633614) 1 NC_009831.1 KEGG: shm:Shewmr7_3358 protein of unknown function RIO1; hypothetical protein 4633614 5612040 Ssed_3802 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475534.1 4632760 R 425104 CDS YP_001475535.1 157376935 5612041 complement(4633741..4634154) 1 NC_009831.1 KEGG: pfo:Pfl_5227 hypothetical protein; hypothetical protein 4634154 5612041 Ssed_3803 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475535.1 4633741 R 425104 CDS YP_001475536.1 157376936 5612042 complement(4634239..4635987) 1 NC_009831.1 KEGG: she:Shewmr4_3076 hypothetical protein; hypothetical protein 4635987 5612042 Ssed_3804 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475536.1 4634239 R 425104 CDS YP_001475537.1 157376937 5610739 complement(4636910..4637677) 1 NC_009831.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 4637677 5610739 Ssed_3805 Shewanella sediminis HAW-EB3 phosphoadenosine phosphosulfate reductase YP_001475537.1 4636910 R 425104 CDS YP_001475538.1 157376938 5610740 complement(4637670..4639433) 1 NC_009831.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 4639433 5610740 Ssed_3806 Shewanella sediminis HAW-EB3 sulfite reductase subunit beta YP_001475538.1 4637670 R 425104 CDS YP_001475539.1 157376939 5610741 complement(4639501..4641276) 1 NC_009831.1 KEGG: sfr:Sfri_3193 sulfite reductase (NADPH) flavoprotein, alpha chain; sulfite reductase (NADPH) flavoprotein, alpha chain 4641276 5610741 Ssed_3807 Shewanella sediminis HAW-EB3 sulfite reductase (NADPH) flavoprotein, alpha chain YP_001475539.1 4639501 R 425104 CDS YP_001475540.1 157376940 5610742 4641624..4643006 1 NC_009831.1 KEGG: vpa:VP1446 hypothetical protein; hypothetical protein 4643006 5610742 Ssed_3808 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475540.1 4641624 D 425104 CDS YP_001475541.1 157376941 5613600 4643317..4643592 1 NC_009831.1 KEGG: slo:Shew_0661 hypothetical protein; hypothetical protein 4643592 5613600 Ssed_3809 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475541.1 4643317 D 425104 CDS YP_001475542.1 157376942 5613601 complement(4643738..4644217) 1 NC_009831.1 KEGG: shw:Sputw3181_0878 transcriptional regulator, TetR family; TetR family transcriptional regulator 4644217 5613601 Ssed_3810 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001475542.1 4643738 R 425104 CDS YP_001475543.1 157376943 5613602 complement(4644614..4645423) 1 NC_009831.1 KEGG: son:SO3744 hypothetical protein; hypothetical protein 4645423 5613602 Ssed_3811 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475543.1 4644614 R 425104 CDS YP_001475544.1 157376944 5613603 complement(4645486..4646916) 1 NC_009831.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 4646916 5613603 Ssed_3812 Shewanella sediminis HAW-EB3 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_001475544.1 4645486 R 425104 CDS YP_001475545.1 157376945 5613326 4647077..4648003 1 NC_009831.1 KEGG: shm:Shewmr7_0885 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl acyltransferase 4648003 5613326 Ssed_3813 Shewanella sediminis HAW-EB3 lipid A biosynthesis lauroyl acyltransferase YP_001475545.1 4647077 D 425104 CDS YP_001475546.1 157376946 5613327 4648375..4648629 1 NC_009831.1 KEGG: vpa:VP1821 YefM protein; YefM protein 4648629 5613327 Ssed_3814 Shewanella sediminis HAW-EB3 YefM protein YP_001475546.1 4648375 D 425104 CDS YP_001475547.1 157376947 5613328 4648622..4648885 1 NC_009831.1 KEGG: vpa:VP1820 hypothetical protein; hypothetical protein 4648885 5613328 Ssed_3815 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475547.1 4648622 D 425104 CDS YP_001475548.1 157376948 5613396 complement(4648937..4649851) 1 NC_009831.1 KEGG: she:Shewmr4_1826 ApbE family lipoprotein; ApbE family lipoprotein 4649851 5613396 Ssed_3816 Shewanella sediminis HAW-EB3 ApbE family lipoprotein YP_001475548.1 4648937 R 425104 CDS YP_001475549.1 157376949 5613397 complement(4649891..4651189) 1 NC_009831.1 KEGG: sfr:Sfri_1126 hypothetical protein; hypothetical protein 4651189 5613397 Ssed_3817 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475549.1 4649891 R 425104 CDS YP_001475550.1 157376950 5613398 complement(4651180..4651395) 1 NC_009831.1 KEGG: sfr:Sfri_1125 lipoprotein; lipoprotein 4651395 5613398 Ssed_3818 Shewanella sediminis HAW-EB3 lipoprotein YP_001475550.1 4651180 R 425104 CDS YP_001475551.1 157376951 5613399 complement(4651399..4651866) 1 NC_009831.1 KEGG: shm:Shewmr7_2154 redoxin domain protein; redoxin domain-containing protein 4651866 5613399 Ssed_3819 Shewanella sediminis HAW-EB3 redoxin domain-containing protein YP_001475551.1 4651399 R 425104 CDS YP_001475552.1 157376952 5613280 complement(4652192..4653373) 1 NC_009831.1 KEGG: son:SO4160 flagellar biosynthesis protein; flagellar biosynthesis protein 4653373 5613280 Ssed_3820 Shewanella sediminis HAW-EB3 flagellar biosynthesis protein YP_001475552.1 4652192 R 425104 CDS YP_001475553.1 157376953 5613281 complement(4653466..4655190) 1 NC_009831.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 4655190 5613281 Ssed_3821 Shewanella sediminis HAW-EB3 potassium/proton antiporter YP_001475553.1 4653466 R 425104 CDS YP_001475554.1 157376954 5613282 4655751..4658036 1 NC_009831.1 KEGG: slo:Shew_0657 nitric oxide reductase (subunit B) transmembrane protein; nitric oxide reductase (subunit B) transmembrane protein 4658036 5613282 Ssed_3822 Shewanella sediminis HAW-EB3 nitric oxide reductase (subunit B) transmembrane protein YP_001475554.1 4655751 D 425104 CDS YP_001475555.1 157376955 5613283 4658242..4659795 1 NC_009831.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 4659795 5613283 Ssed_3823 Shewanella sediminis HAW-EB3 anaerobic nitric oxide reductase transcriptional regulator YP_001475555.1 4658242 D 425104 CDS YP_001475556.1 157376956 5613272 4659955..4661364 1 NC_009831.1 KEGG: slo:Shew_0655 peptidase M16 domain protein; peptidase M16 domain-containing protein 4661364 5613272 Ssed_3824 Shewanella sediminis HAW-EB3 peptidase M16 domain-containing protein YP_001475556.1 4659955 D 425104 CDS YP_001475557.1 157376957 5613273 4661361..4662896 1 NC_009831.1 KEGG: slo:Shew_0654 peptidase M16 domain protein; peptidase M16 domain-containing protein 4662896 5613273 Ssed_3825 Shewanella sediminis HAW-EB3 peptidase M16 domain-containing protein YP_001475557.1 4661361 D 425104 CDS YP_001475558.1 157376958 5613274 4662914..4664134 1 NC_009831.1 KEGG: slo:Shew_0631 AFG1-family ATPase; AFG1 family ATPase 4664134 5613274 Ssed_3826 Shewanella sediminis HAW-EB3 AFG1 family ATPase YP_001475558.1 4662914 D 425104 CDS YP_001475559.1 157376959 5613275 4664317..4666404 1 NC_009831.1 KEGG: pen:PSEEN0903 methyl-accepting chemotaxis transducer; methyl-accepting chemotaxis transducer 4666404 5613275 Ssed_3827 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis transducer YP_001475559.1 4664317 D 425104 CDS YP_001475560.1 157376960 5613012 4666581..4668821 1 NC_009831.1 KEGG: cps:CPS_4816 hypothetical protein; hypothetical protein 4668821 5613012 Ssed_3828 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475560.1 4666581 D 425104 CDS YP_001475561.1 157376961 5613013 4669032..4669823 1 NC_009831.1 KEGG: vpa:VP1159 ABC transport system permease; ABC transporter permease 4669823 5613013 Ssed_3829 Shewanella sediminis HAW-EB3 ABC transporter permease YP_001475561.1 4669032 D 425104 CDS YP_001475562.1 157376962 5613014 complement(4669889..4670635) 1 NC_009831.1 KEGG: slo:Shew_0629 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4670635 5613014 Ssed_3830 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001475562.1 4669889 R 425104 CDS YP_001475563.1 157376963 5613015 complement(4670885..4671334) 1 NC_009831.1 KEGG: vvy:VV2395 hypothetical protein; hypothetical protein 4671334 5613015 Ssed_3831 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475563.1 4670885 R 425104 CDS YP_001475564.1 157376964 5613148 complement(4671487..4672251) 1 NC_009831.1 hypothetical protein 4672251 5613148 Ssed_3832 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475564.1 4671487 R 425104 CDS YP_001475565.1 157376965 5613149 complement(4672431..4675295) 1 NC_009831.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 4675295 5613149 Ssed_3833 Shewanella sediminis HAW-EB3 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_001475565.1 4672431 R 425104 CDS YP_001475566.1 157376966 5613150 4675521..4676480 1 NC_009831.1 KEGG: slo:Shew_0627 hypothetical protein; hypothetical protein 4676480 5613150 Ssed_3834 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475566.1 4675521 D 425104 CDS YP_001475567.1 157376967 5613151 4676494..4677393 1 NC_009831.1 KEGG: sbl:Sbal_3447 protein of unknown function DUF350; hypothetical protein 4677393 5613151 Ssed_3835 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475567.1 4676494 D 425104 CDS YP_001475568.1 157376968 5612739 4677484..4679271 1 NC_009831.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 4679271 5612739 Ssed_3836 Shewanella sediminis HAW-EB3 spermidine synthase YP_001475568.1 4677484 D 425104 CDS YP_001475569.1 157376969 5612740 4679464..4679877 1 NC_009831.1 KEGG: sbl:Sbal_3449 hypothetical protein; hypothetical protein 4679877 5612740 Ssed_3837 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475569.1 4679464 D 425104 CDS YP_001475570.1 157376970 5612741 4679939..4680625 1 NC_009831.1 KEGG: slo:Shew_0623 phage shock protein A, PspA; phage shock protein A, PspA 4680625 5612741 Ssed_3838 Shewanella sediminis HAW-EB3 phage shock protein A, PspA YP_001475570.1 4679939 D 425104 CDS YP_001475571.1 157376971 5612742 4680822..4681475 1 NC_009831.1 KEGG: sbl:Sbal_3451 hypothetical protein; hypothetical protein 4681475 5612742 Ssed_3839 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475571.1 4680822 D 425104 CDS YP_001475572.1 157376972 5611792 4681542..4681871 1 NC_009831.1 KEGG: shw:Sputw3181_0851 hypothetical protein; hypothetical protein 4681871 5611792 Ssed_3840 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475572.1 4681542 D 425104 CDS YP_001475573.1 157376973 5611793 4681943..4682749 1 NC_009831.1 KEGG: slo:Shew_0620 ion transport 2 domain protein; ion transport 2 domain-containing protein 4682749 5611793 Ssed_3841 Shewanella sediminis HAW-EB3 ion transport 2 domain-containing protein YP_001475573.1 4681943 D 425104 CDS YP_001475574.1 157376974 5611794 complement(4682871..4684373) 1 NC_009831.1 KEGG: slo:Shew_0619 adenylate cyclase; adenylate cyclase 4684373 5611794 Ssed_3842 Shewanella sediminis HAW-EB3 adenylate cyclase YP_001475574.1 4682871 R 425104 CDS YP_001475575.1 157376975 5611698 4684660..4685340 1 NC_009831.1 KEGG: slo:Shew_0618 protein of unknown function DUF47; hypothetical protein 4685340 5611698 Ssed_3843 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475575.1 4684660 D 425104 CDS YP_001475576.1 157376976 5611699 4685365..4686633 1 NC_009831.1 KEGG: slo:Shew_0617 phosphate transporter; phosphate transporter 4686633 5611699 Ssed_3844 Shewanella sediminis HAW-EB3 phosphate transporter YP_001475576.1 4685365 D 425104 CDS YP_001475577.1 157376977 5611700 4686967..4687512 1 NC_009831.1 KEGG: slo:Shew_0616 SH3 domain protein domain protein; SH3 domain-containing protein 4687512 5611700 Ssed_3845 Shewanella sediminis HAW-EB3 SH3 domain-containing protein YP_001475577.1 4686967 D 425104 CDS YP_001475578.1 157376978 5611701 4687890..4691084 1 NC_009831.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4691084 5611701 Ssed_3846 Shewanella sediminis HAW-EB3 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001475578.1 4687890 D 425104 CDS YP_001475579.1 157376979 5611690 4691215..4691391 1 NC_009831.1 KEGG: saz:Sama_2677 conserved hypothetical protein; hypothetical protein 4691391 5611690 Ssed_3847 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475579.1 4691215 D 425104 CDS YP_001475580.1 157376980 5611691 complement(4691458..4693272) 1 NC_009831.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 4693272 5611691 Ssed_3848 Shewanella sediminis HAW-EB3 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001475580.1 4691458 R 425104 CDS YP_001475581.1 157376981 5611692 complement(4693269..4695098) 1 NC_009831.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 4695098 5611692 Ssed_3849 Shewanella sediminis HAW-EB3 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001475581.1 4693269 R 425104 CDS YP_001475582.1 157376982 5611693 complement(4695351..4695698) 1 NC_009831.1 KEGG: slo:Shew_0605 hypothetical protein; hypothetical protein 4695698 5611693 Ssed_3850 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475582.1 4695351 R 425104 CDS YP_001475583.1 157376983 5611655 4696231..4697772 1 NC_009831.1 KEGG: slo:Shew_0604 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4697772 5611655 Ssed_3851 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001475583.1 4696231 D 425104 CDS YP_001475584.1 157376984 5611656 complement(4698726..4700102) 1 NC_009831.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 4700102 5611656 Ssed_3852 Shewanella sediminis HAW-EB3 ATP-dependent RNA helicase DbpA YP_001475584.1 4698726 R 425104 CDS YP_001475585.1 157376985 5611657 complement(4700624..4701319) 1 NC_009831.1 KEGG: dvl:Dvul_0140 lipoprotein; hypothetical protein 4701319 5611657 Ssed_3853 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475585.1 4700624 R 425104 CDS YP_001475586.1 157376986 5611658 complement(4701668..4703077) 1 NC_009831.1 KEGG: slo:Shew_0597 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4703077 5611658 Ssed_3854 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001475586.1 4701668 R 425104 CDS YP_001475587.1 157376987 5611647 4703582..4703893 1 NC_009831.1 KEGG: slo:Shew_0595 hypothetical protein; hypothetical protein 4703893 5611647 Ssed_3855 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475587.1 4703582 D 425104 CDS YP_001475588.1 157376988 5611648 4704034..4705956 1 NC_009831.1 KEGG: slo:Shew_0596 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4705956 5611648 Ssed_3856 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001475588.1 4704034 D 425104 CDS YP_001475589.1 157376989 5611649 4706382..4707263 1 NC_009831.1 KEGG: cps:CPS_4655 transcriptional regulator, AraC family; AraC family transcriptional regulator 4707263 5611649 Ssed_3857 Shewanella sediminis HAW-EB3 AraC family transcriptional regulator YP_001475589.1 4706382 D 425104 CDS YP_001475590.1 157376990 5611650 4707677..4709296 1 NC_009831.1 KEGG: sbl:Sbal_4189 Ig family protein; hypothetical protein 4709296 5611650 Ssed_3858 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475590.1 4707677 D 425104 CDS YP_001475591.1 157376991 5611412 4709753..4710454 1 NC_009831.1 KEGG: bld:BLi02636 SinR; hypothetical protein 4710454 5611412 Ssed_3859 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475591.1 4709753 D 425104 CDS YP_001475592.1 157376992 5611413 complement(4710572..4710772) 1 NC_009831.1 KEGG: shw:Sputw3181_0827 hypothetical protein; hypothetical protein 4710772 5611413 Ssed_3860 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475592.1 4710572 R 425104 CDS YP_001475593.1 157376993 5611414 4710966..4712876 1 NC_009831.1 KEGG: slo:Shew_0593 ABC transporter-related protein; ABC transporter-like protein 4712876 5611414 Ssed_3861 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001475593.1 4710966 D 425104 CDS YP_001475594.1 157376994 5611415 4712955..4713392 1 NC_009831.1 KEGG: slo:Shew_0592 hypothetical protein; hypothetical protein 4713392 5611415 Ssed_3862 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475594.1 4712955 D 425104 CDS YP_001475595.1 157376995 5611603 complement(4713451..4715046) 1 NC_009831.1 KEGG: slo:Shew_0591 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 4715046 5611603 Ssed_3863 Shewanella sediminis HAW-EB3 glucose-methanol-choline oxidoreductase YP_001475595.1 4713451 R 425104 CDS YP_001475596.1 157376996 5611604 complement(4715121..4715636) 1 NC_009831.1 KEGG: slo:Shew_0590 hypothetical protein; hypothetical protein 4715636 5611604 Ssed_3864 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475596.1 4715121 R 425104 CDS YP_001475597.1 157376997 5611605 4715919..4716890 1 NC_009831.1 KEGG: sbl:Sbal_3484 alpha/beta hydrolase fold; alpha/beta hydrolase 4716890 5611605 Ssed_3865 Shewanella sediminis HAW-EB3 alpha/beta hydrolase YP_001475597.1 4715919 D 425104 CDS YP_001475598.1 157376998 5611606 4716893..4717129 1 NC_009831.1 KEGG: sfr:Sfri_3289 hypothetical protein; hypothetical protein 4717129 5611606 Ssed_3866 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475598.1 4716893 D 425104 CDS YP_001475599.1 157376999 5609676 4717252..4718139 1 NC_009831.1 KEGG: slo:Shew_0587 phosphoribulokinase; phosphoribulokinase 4718139 5609676 Ssed_3867 Shewanella sediminis HAW-EB3 phosphoribulokinase YP_001475599.1 4717252 D 425104 CDS YP_001475600.1 157377000 5609677 complement(4718723..4721857) 1 NC_009831.1 KEGG: pha:PSHAa0579 cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA); cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA) 4721857 5609677 Ssed_3868 Shewanella sediminis HAW-EB3 cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA) YP_001475600.1 4718723 R 425104 CDS YP_001475601.1 157377001 5609678 complement(4721870..4723168) 1 NC_009831.1 KEGG: pha:PSHAa0578 cobalt-zinc-cadmium resistance protein; (cation efflux system protein); cobalt-zinc-cadmium resistance protein (cation efflux system protein) 4723168 5609678 Ssed_3869 Shewanella sediminis HAW-EB3 cobalt-zinc-cadmium resistance protein (cation efflux system protein) YP_001475601.1 4721870 R 425104 CDS YP_001475602.1 157377002 5611599 complement(4723168..4724514) 1 NC_009831.1 KEGG: ilo:IL0779 Co/Zn/Cd efflux system component; Co/Zn/Cd efflux system protein 4724514 5611599 Ssed_3870 Shewanella sediminis HAW-EB3 Co/Zn/Cd efflux system protein YP_001475602.1 4723168 R 425104 CDS YP_001475603.1 157377003 5611600 complement(4724652..4725050) 1 NC_009831.1 hypothetical protein 4725050 5611600 Ssed_3871 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475603.1 4724652 R 425104 CDS YP_001475604.1 157377004 5611601 complement(4725366..4726142) 1 NC_009831.1 KEGG: sbl:Sbal_0579 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 4726142 5611601 Ssed_3872 Shewanella sediminis HAW-EB3 Sel1 domain-containing protein YP_001475604.1 4725366 R 425104 CDS YP_001475605.1 157377005 5611602 4726590..4727225 1 NC_009831.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 4727225 5611602 Ssed_3873 Shewanella sediminis HAW-EB3 cAMP-regulatory protein YP_001475605.1 4726590 D 425104 CDS YP_001475606.1 157377006 5611515 4727308..4727646 1 NC_009831.1 KEGG: son:SO0623 hypothetical protein; hypothetical protein 4727646 5611515 Ssed_3874 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475606.1 4727308 D 425104 CDS YP_001475607.1 157377007 5611516 4727694..4728368 1 NC_009831.1 KEGG: slo:Shew_0583 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4728368 5611516 Ssed_3875 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001475607.1 4727694 D 425104 CDS YP_001475608.1 157377008 5611517 4728365..4729690 1 NC_009831.1 KEGG: slo:Shew_0582 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4729690 5611517 Ssed_3876 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001475608.1 4728365 D 425104 CDS YP_001475609.1 157377009 5611518 complement(4730169..4731959) 1 NC_009831.1 KEGG: slo:Shew_3112 flavocytochrome c; succinate dehydrogenase 4731959 5611518 Ssed_3877 Shewanella sediminis HAW-EB3 succinate dehydrogenase YP_001475609.1 4730169 R 425104 CDS YP_001475610.1 157377010 5611039 4732302..4734380 1 NC_009831.1 KEGG: slo:Shew_3113 histidine kinase; histidine kinase 4734380 5611039 Ssed_3878 Shewanella sediminis HAW-EB3 histidine kinase YP_001475610.1 4732302 D 425104 CDS YP_001475611.1 157377011 5611040 4734377..4735759 1 NC_009831.1 KEGG: sfr:Sfri_3688 two component, sigma54 specific, transcriptional regulator, fis family protein; two component, sigma54 specific, transcriptional regulator, fis family protein 4735759 5611040 Ssed_3879 Shewanella sediminis HAW-EB3 two component, sigma54 specific, transcriptional regulator, fis family protein YP_001475611.1 4734377 D 425104 CDS YP_001475612.1 157377012 5611041 complement(4735808..4737850) 1 NC_009831.1 KEGG: vvu:VV2_0464 signal transduction histidine kinase; Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein 4737850 5611041 Ssed_3880 Shewanella sediminis HAW-EB3 Signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein YP_001475612.1 4735808 R 425104 CDS YP_001475613.1 157377013 5611042 complement(4737847..4739082) 1 NC_009831.1 KEGG: azo:azo0137 aliphatic amidase expression-regulating protein; aliphatic amidase expression-regulating protein 4739082 5611042 Ssed_3881 Shewanella sediminis HAW-EB3 aliphatic amidase expression-regulating protein YP_001475613.1 4737847 R 425104 CDS YP_001475614.1 157377014 5613476 complement(4739244..4740518) 1 NC_009831.1 KEGG: slo:Shew_3115 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 4740518 5613476 Ssed_3882 Shewanella sediminis HAW-EB3 sodium:dicarboxylate symporter YP_001475614.1 4739244 R 425104 CDS YP_001475615.1 157377015 5613477 complement(4741037..4742257) 1 NC_009831.1 KEGG: slo:Shew_3116 hypothetical protein; hypothetical protein 4742257 5613477 Ssed_3883 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475615.1 4741037 R 425104 CDS YP_001475616.1 157377016 5613478 complement(4742259..4742912) 1 NC_009831.1 KEGG: sfr:Sfri_0526 hypothetical protein; hypothetical protein 4742912 5613478 Ssed_3884 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475616.1 4742259 R 425104 CDS YP_001475617.1 157377017 5613479 complement(4742912..4746586) 1 NC_009831.1 KEGG: slo:Shew_3118 hypothetical protein; hypothetical protein 4746586 5613479 Ssed_3885 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475617.1 4742912 R 425104 CDS YP_001475618.1 157377018 5611182 complement(4746969..4748348) 1 NC_009831.1 KEGG: sbl:Sbal_3506 amino acid carrier protein; amino acid carrier protein 4748348 5611182 Ssed_3886 Shewanella sediminis HAW-EB3 amino acid carrier protein YP_001475618.1 4746969 R 425104 CDS YP_001475619.1 157377019 5611183 complement(4749263..4749964) 1 NC_009831.1 KEGG: shn:Shewana3_0631 hypothetical protein; hypothetical protein 4749964 5611183 Ssed_3887 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475619.1 4749263 R 425104 CDS YP_001475620.1 157377020 5611184 4750247..4752439 1 NC_009831.1 KEGG: shm:Shewmr7_3399 TonB-dependent receptor; TonB-dependent receptor 4752439 5611184 Ssed_3888 Shewanella sediminis HAW-EB3 TonB-dependent receptor YP_001475620.1 4750247 D 425104 CDS YP_001475621.1 157377021 5611185 4752707..4753894 1 NC_009831.1 KEGG: slo:Shew_3120 phosphate-selective porin O and P; phosphate-selective porin O and P 4753894 5611185 Ssed_3889 Shewanella sediminis HAW-EB3 phosphate-selective porin O and P YP_001475621.1 4752707 D 425104 CDS YP_001475622.1 157377022 5614175 4754050..4754619 1 NC_009831.1 KEGG: slo:Shew_3121 FMN-binding domain protein; FMN-binding domain-containing protein 4754619 5614175 Ssed_3890 Shewanella sediminis HAW-EB3 FMN-binding domain-containing protein YP_001475622.1 4754050 D 425104 CDS YP_001475623.1 157377023 5614176 4754705..4755550 1 NC_009831.1 KEGG: slo:Shew_3122 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 4755550 5614176 Ssed_3891 Shewanella sediminis HAW-EB3 PepSY-associated TM helix domain-containing protein YP_001475623.1 4754705 D 425104 CDS YP_001475624.1 157377024 5614177 complement(4755639..4757573) 1 NC_009831.1 hypothetical protein 4757573 5614177 Ssed_3892 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475624.1 4755639 R 425104 CDS YP_001475625.1 157377025 5614178 complement(4757855..4759777) 1 NC_009831.1 KEGG: pat:Patl_3292 protein of unknown function DUF1566; hypothetical protein 4759777 5614178 Ssed_3893 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475625.1 4757855 R 425104 CDS YP_001475626.1 157377026 5611702 complement(4760183..4762546) 1 NC_009831.1 KEGG: slo:Shew_3123 penicillin-binding protein 1B; peptidoglycan glycosyltransferase 4762546 5611702 Ssed_3894 Shewanella sediminis HAW-EB3 peptidoglycan glycosyltransferase YP_001475626.1 4760183 R 425104 CDS YP_001475627.1 157377027 5611703 complement(4762715..4765282) 1 NC_009831.1 KEGG: sbl:Sbal_0582 ATP-dependent helicase HrpB; ATP-dependent helicase HrpB 4765282 5611703 Ssed_3895 Shewanella sediminis HAW-EB3 ATP-dependent helicase HrpB YP_001475627.1 4762715 R 425104 CDS YP_001475628.1 157377028 5611704 4765585..4766259 1 NC_009831.1 KEGG: slo:Shew_3126 2'-5' RNA ligase; 2'-5' RNA ligase 4766259 5611704 Ssed_3896 Shewanella sediminis HAW-EB3 2'-5' RNA ligase YP_001475628.1 4765585 D 425104 CDS YP_001475629.1 157377029 5611282 complement(4766380..4767657) 1 NC_009831.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase 4767657 5611282 Ssed_3897 Shewanella sediminis HAW-EB3 aminopeptidase YP_001475629.1 4766380 R 425104 CDS YP_001475630.1 157377030 5611283 4767917..4768687 1 NC_009831.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 4768687 5611283 Ssed_3898 Shewanella sediminis HAW-EB3 sugar fermentation stimulation protein A YP_001475630.1 4767917 D 425104 CDS YP_001475631.1 157377031 5611284 4768847..4769290 1 NC_009831.1 KEGG: shw:Sputw3181_0815 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 4769290 5611284 Ssed_3899 Shewanella sediminis HAW-EB3 TraR/DksA family transcriptional regulator YP_001475631.1 4768847 D 425104 CDS YP_001475632.1 157377032 5611285 4769534..4770451 1 NC_009831.1 KEGG: she:Shewmr4_0729 glutamyl-tRNA synthetase, class Ic; glutamyl-tRNA synthetase 4770451 5611285 Ssed_3900 Shewanella sediminis HAW-EB3 glutamyl-tRNA synthetase YP_001475632.1 4769534 D 425104 CDS YP_001475633.1 157377033 5611343 4770535..4772025 1 NC_009831.1 KEGG: slo:Shew_3131 poly(A) polymerase; polynucleotide adenylyltransferase 4772025 5611343 Ssed_3901 Shewanella sediminis HAW-EB3 polynucleotide adenylyltransferase YP_001475633.1 4770535 D 425104 CDS YP_001475634.1 157377034 5611344 4772025..4772528 1 NC_009831.1 KEGG: sbl:Sbal_3493 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 4772528 5611344 Ssed_3902 Shewanella sediminis HAW-EB3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001475634.1 4772025 D 425104 CDS YP_001475635.1 157377035 5611345 4772630..4773424 1 NC_009831.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4773424 panB 5611345 panB Shewanella sediminis HAW-EB3 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001475635.1 4772630 D 425104 CDS YP_001475636.1 157377036 5611346 4773543..4774388 1 NC_009831.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 4774388 panC 5611346 panC Shewanella sediminis HAW-EB3 pantoate--beta-alanine ligase YP_001475636.1 4773543 D 425104 CDS YP_001475637.1 157377037 5611200 4774692..4775213 1 NC_009831.1 KEGG: shn:Shewana3_3410 hypothetical protein; hypothetical protein 4775213 5611200 Ssed_3905 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475637.1 4774692 D 425104 CDS YP_001475638.1 157377038 5611201 4775358..4775762 1 NC_009831.1 KEGG: slo:Shew_3138 hypothetical protein; hypothetical protein 4775762 5611201 Ssed_3906 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475638.1 4775358 D 425104 CDS YP_001475639.1 157377039 5611202 4775787..4776152 1 NC_009831.1 KEGG: slo:Shew_3139 hypothetical protein; hypothetical protein 4776152 5611202 Ssed_3907 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475639.1 4775787 D 425104 CDS YP_001475640.1 157377040 5611203 complement(4776241..4777017) 1 NC_009831.1 KEGG: slo:Shew_3140 ABC-2 type transporter; ABC transporter 4777017 5611203 Ssed_3908 Shewanella sediminis HAW-EB3 ABC transporter YP_001475640.1 4776241 R 425104 CDS YP_001475641.1 157377041 5610017 complement(4777014..4777973) 1 NC_009831.1 KEGG: slo:Shew_3141 ABC transporter-related protein; ABC transporter-like protein 4777973 5610017 Ssed_3909 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001475641.1 4777014 R 425104 CDS YP_001475642.1 157377042 5610018 complement(4778087..4778617) 1 NC_009831.1 KEGG: slo:Shew_3142 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 4778617 5610018 Ssed_3910 Shewanella sediminis HAW-EB3 hypoxanthine phosphoribosyltransferase YP_001475642.1 4778087 R 425104 CDS YP_001475643.1 157377043 5610019 complement(4778636..4779295) 1 NC_009831.1 KEGG: slo:Shew_3143 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; aromatic acid decarboxylase 4779295 5610019 Ssed_3911 Shewanella sediminis HAW-EB3 aromatic acid decarboxylase YP_001475643.1 4778636 R 425104 CDS YP_001475644.1 157377044 5610020 complement(4779334..4780797) 1 NC_009831.1 KEGG: slo:Shew_3144 UDP-N-acetylmuramate; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4780797 5610020 Ssed_3912 Shewanella sediminis HAW-EB3 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_001475644.1 4779334 R 425104 CDS YP_001475645.1 157377045 5610212 4781546..4781836 1 NC_009831.1 KEGG: slo:Shew_0501 protein of unknown function DUF134; hypothetical protein 4781836 5610212 Ssed_3913 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475645.1 4781546 D 425104 CDS YP_001475646.1 157377046 5610213 4781901..4782548 1 NC_009831.1 KEGG: shw:Sputw3181_3482 hypothetical protein; hypothetical protein 4782548 5610213 Ssed_3914 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475646.1 4781901 D 425104 CDS YP_001475647.1 157377047 5610214 complement(4782707..4783777) 1 NC_009831.1 KEGG: mgm:Mmc1_3408 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 4783777 5610214 Ssed_3915 Shewanella sediminis HAW-EB3 response regulator receiver modulated metal dependent phosphohydrolase YP_001475647.1 4782707 R 425104 CDS YP_001475648.1 157377048 5610215 complement(4784049..4785446) 1 NC_009831.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 4785446 tnaA 5610215 tnaA Shewanella sediminis HAW-EB3 tryptophanase YP_001475648.1 4784049 R 425104 CDS YP_001475649.1 157377049 5611741 complement(4785784..4786404) 1 NC_009831.1 hypothetical protein 4786404 5611741 Ssed_3917 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475649.1 4785784 R 425104 CDS YP_001475650.1 157377050 5611742 4786721..4787425 1 NC_009831.1 KEGG: sbl:Sbal_3799 protein of unknown function DUF541; hypothetical protein 4787425 5611742 Ssed_3918 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475650.1 4786721 D 425104 CDS YP_001475651.1 157377051 5611743 complement(4787501..4789549) 1 NC_009831.1 KEGG: pin:Ping_0636 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 4789549 5611743 Ssed_3919 Shewanella sediminis HAW-EB3 cyclic nucleotide-binding protein YP_001475651.1 4787501 R 425104 CDS YP_001475652.1 157377052 5611744 4789960..4790700 1 NC_009831.1 KEGG: sdn:Sden_0704 amino acid-binding protein; amino acid-binding protein 4790700 5611744 Ssed_3920 Shewanella sediminis HAW-EB3 amino acid-binding protein YP_001475652.1 4789960 D 425104 CDS YP_001475653.1 157377053 5612643 4790860..4791756 1 NC_009831.1 KEGG: slo:Shew_3007 transcriptional regulator, LysR family; LysR family transcriptional regulator 4791756 5612643 Ssed_3921 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475653.1 4790860 D 425104 CDS YP_001475654.1 157377054 5612644 complement(4791812..4792381) 1 NC_009831.1 KEGG: slo:Shew_3006 hypothetical protein; hypothetical protein 4792381 5612644 Ssed_3922 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475654.1 4791812 R 425104 CDS YP_001475655.1 157377055 5612645 complement(4792386..4793759) 1 NC_009831.1 KEGG: slo:Shew_3005 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4793759 5612645 Ssed_3923 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475655.1 4792386 R 425104 CDS YP_001475656.1 157377056 5612385 complement(4793770..4794513) 1 NC_009831.1 KEGG: slo:Shew_3004 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 4794513 5612385 Ssed_3924 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475656.1 4793770 R 425104 CDS YP_001475657.1 157377057 5612386 4794969..4795967 1 NC_009831.1 KEGG: sfr:Sfri_0588 WD-40 repeat protein; WD-40 repeat-containing protein 4795967 5612386 Ssed_3925 Shewanella sediminis HAW-EB3 WD-40 repeat-containing protein YP_001475657.1 4794969 D 425104 CDS YP_001475658.1 157377058 5612387 complement(4796096..4796887) 1 NC_009831.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 4796887 5612387 Ssed_3926 Shewanella sediminis HAW-EB3 prolipoprotein diacylglyceryl transferase YP_001475658.1 4796096 R 425104 CDS YP_001475659.1 157377059 5612388 complement(4797122..4797652) 1 NC_009831.1 KEGG: aha:AHA_2414 acetyltransferase; acetyltransferase 4797652 5612388 Ssed_3927 Shewanella sediminis HAW-EB3 acetyltransferase YP_001475659.1 4797122 R 425104 CDS YP_001475660.1 157377060 5612581 complement(4798053..4799336) 1 NC_009831.1 KEGG: slo:Shew_3172 4-aminobutyrate aminotransferase; (S)-3-amino-2-methylpropionate transaminase 4799336 5612581 Ssed_3928 Shewanella sediminis HAW-EB3 (S)-3-amino-2-methylpropionate transaminase YP_001475660.1 4798053 R 425104 CDS YP_001475661.1 157377061 5612582 complement(4799466..4800935) 1 NC_009831.1 KEGG: slo:Shew_3173 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase 4800935 5612582 Ssed_3929 Shewanella sediminis HAW-EB3 succinate-semialdehyde dehydrogenase YP_001475661.1 4799466 R 425104 CDS YP_001475662.1 157377062 5612583 4801077..4802021 1 NC_009831.1 KEGG: slo:Shew_3174 transcriptional regulator, LysR family; LysR family transcriptional regulator 4802021 5612583 Ssed_3930 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475662.1 4801077 D 425104 CDS YP_001475663.1 157377063 5612584 complement(4802065..4802706) 1 NC_009831.1 KEGG: aha:AHA_3512 transporter, LysE family; amino acid transporter LysE 4802706 5612584 Ssed_3931 Shewanella sediminis HAW-EB3 amino acid transporter LysE YP_001475663.1 4802065 R 425104 CDS YP_001475664.1 157377064 5612915 complement(4802900..4803688) 1 NC_009831.1 KEGG: hch:HCH_05487 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic protein 4803688 5612915 Ssed_3932 Shewanella sediminis HAW-EB3 amino acid ABC transporter periplasmic protein YP_001475664.1 4802900 R 425104 CDS YP_001475665.1 157377065 5612916 complement(4803828..4804376) 1 NC_009831.1 KEGG: spc:Sputcn32_1257 hypothetical protein; hypothetical protein 4804376 5612916 Ssed_3933 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475665.1 4803828 R 425104 CDS YP_001475666.1 157377066 5612917 4804723..4806096 1 NC_009831.1 KEGG: slo:Shew_3178 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 4806096 5612917 Ssed_3934 Shewanella sediminis HAW-EB3 Na+/H+ antiporter NhaC YP_001475666.1 4804723 D 425104 CDS YP_001475667.1 157377067 5612918 4806355..4807047 1 NC_009831.1 KEGG: slo:Shew_3179 hypothetical protein; hypothetical protein 4807047 5612918 Ssed_3935 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475667.1 4806355 D 425104 CDS YP_001475668.1 157377068 5613442 4807155..4807940 1 NC_009831.1 KEGG: slo:Shew_3180 pseudouridine synthase; pseudouridine synthase 4807940 5613442 Ssed_3936 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001475668.1 4807155 D 425104 CDS YP_001475669.1 157377069 5613443 complement(4807998..4810154) 1 NC_009831.1 KEGG: slo:Shew_3187 hypothetical protein; hypothetical protein 4810154 5613443 Ssed_3937 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475669.1 4807998 R 425104 CDS YP_001475670.1 157377070 5613444 complement(4810365..4811543) 1 NC_009831.1 KEGG: shm:Shewmr7_0948 aromatic amino acid permease; aromatic amino acid permease 4811543 5613444 Ssed_3938 Shewanella sediminis HAW-EB3 aromatic amino acid permease YP_001475670.1 4810365 R 425104 CDS YP_001475671.1 157377071 5613445 4812222..4812836 1 NC_009831.1 KEGG: son:SO1071 hypothetical protein; hypothetical protein 4812836 5613445 Ssed_3939 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475671.1 4812222 D 425104 CDS YP_001475672.1 157377072 5612976 complement(4812899..4814380) 1 NC_009831.1 KEGG: sbl:Sbal_0894 catalase; catalase 4814380 5612976 Ssed_3940 Shewanella sediminis HAW-EB3 catalase YP_001475672.1 4812899 R 425104 CDS YP_001475673.1 157377073 5612977 complement(4814828..4815067) 1 NC_009831.1 KEGG: sbl:Sbal_0893 hypothetical protein; hypothetical protein 4815067 5612977 Ssed_3941 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475673.1 4814828 R 425104 CDS YP_001475674.1 157377074 5612978 complement(4815199..4815636) 1 NC_009831.1 KEGG: slo:Shew_3192 uncharacterized domain 1 protein; hypothetical protein 4815636 5612978 Ssed_3942 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475674.1 4815199 R 425104 CDS YP_001475675.1 157377075 5612979 complement(4816395..4819052) 1 NC_009831.1 KEGG: slo:Shew_3193 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 4819052 5612979 Ssed_3943 Shewanella sediminis HAW-EB3 endonuclease/exonuclease/phosphatase YP_001475675.1 4816395 R 425104 CDS YP_001475676.1 157377076 5611531 complement(4819536..4822214) 1 NC_009831.1 KEGG: slo:Shew_3193 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 4822214 5611531 Ssed_3944 Shewanella sediminis HAW-EB3 endonuclease/exonuclease/phosphatase YP_001475676.1 4819536 R 425104 CDS YP_001475677.1 157377077 5611532 complement(4822918..4823583) 1 NC_009831.1 KEGG: she:Shewmr4_0720 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4823583 5611532 Ssed_3945 Shewanella sediminis HAW-EB3 LuxR family transcriptional regulator YP_001475677.1 4822918 R 425104 CDS YP_001475678.1 157377078 5611533 complement(4823883..4824494) 1 NC_009831.1 KEGG: slo:Shew_3195 hypothetical protein; hypothetical protein 4824494 5611533 Ssed_3946 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475678.1 4823883 R 425104 CDS YP_001475679.1 157377079 5611534 4824711..4825946 1 NC_009831.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4825946 5611534 Ssed_3947 Shewanella sediminis HAW-EB3 D-3-phosphoglycerate dehydrogenase YP_001475679.1 4824711 D 425104 CDS YP_001475680.1 157377080 5613859 4826091..4827056 1 NC_009831.1 KEGG: slo:Shew_3198 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 4827056 5613859 Ssed_3948 Shewanella sediminis HAW-EB3 glycine cleavage T protein (aminomethyl transferase) YP_001475680.1 4826091 D 425104 CDS YP_001475681.1 157377081 5613860 4827258..4827617 1 NC_009831.1 KEGG: sil:SPO2248 DnaK suppressor protein; DnaK suppressor protein 4827617 5613860 Ssed_3949 Shewanella sediminis HAW-EB3 DnaK suppressor protein YP_001475681.1 4827258 D 425104 CDS YP_001475682.1 157377082 5613861 4827736..4828980 1 NC_009831.1 KEGG: noc:Noc_0960 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4828980 5613861 Ssed_3950 Shewanella sediminis HAW-EB3 sodium/hydrogen exchanger YP_001475682.1 4827736 D 425104 CDS YP_001475683.1 157377083 5612816 complement(4829202..4829768) 1 NC_009831.1 KEGG: gur:Gura_3739 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; Thiol-disulfide isomerase and thioredoxins-like protein 4829768 5612816 Ssed_3951 Shewanella sediminis HAW-EB3 Thiol-disulfide isomerase and thioredoxins-like protein YP_001475683.1 4829202 R 425104 CDS YP_001475684.1 157377084 5612817 complement(4829891..4830301) 1 NC_009831.1 hypothetical protein 4830301 5612817 Ssed_3952 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475684.1 4829891 R 425104 CDS YP_001475685.1 157377085 5612818 4830710..4831378 1 NC_009831.1 KEGG: slo:Shew_3201 ABC transporter-related protein; ABC transporter-like protein 4831378 5612818 Ssed_3953 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001475685.1 4830710 D 425104 CDS YP_001475686.1 157377086 5612819 4831371..4833920 1 NC_009831.1 KEGG: slo:Shew_3202 protein of unknown function DUF214; hypothetical protein 4833920 5612819 Ssed_3954 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475686.1 4831371 D 425104 CDS YP_001475687.1 157377087 5613855 4833917..4835098 1 NC_009831.1 KEGG: slo:Shew_3203 hypothetical protein; hypothetical protein 4835098 5613855 Ssed_3955 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475687.1 4833917 D 425104 CDS YP_001475688.1 157377088 5613856 4835499..4835753 1 NC_009831.1 KEGG: sbl:Sbal_3510 NapD family protein; NapD family protein 4835753 5613856 Ssed_3956 Shewanella sediminis HAW-EB3 NapD family protein YP_001475688.1 4835499 D 425104 CDS YP_001475689.1 157377089 5613857 4835828..4838308 1 NC_009831.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 4838308 5613857 Ssed_3957 Shewanella sediminis HAW-EB3 nitrate reductase catalytic subunit YP_001475689.1 4835828 D 425104 CDS YP_001475690.1 157377090 5613858 4838379..4839113 1 NC_009831.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 4839113 napG 5613858 napG Shewanella sediminis HAW-EB3 quinol dehydrogenase periplasmic component YP_001475690.1 4838379 D 425104 CDS YP_001475691.1 157377091 5613113 4839110..4840018 1 NC_009831.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 4840018 napH 5613113 napH Shewanella sediminis HAW-EB3 quinol dehydrogenase membrane component YP_001475691.1 4839110 D 425104 CDS YP_001475692.1 157377092 5613114 4840015..4840431 1 NC_009831.1 KEGG: slo:Shew_3209 nitrate reductase cytochrome c-type subunit (NapB); nitrate reductase cytochrome c-type subunit 4840431 5613114 Ssed_3960 Shewanella sediminis HAW-EB3 nitrate reductase cytochrome c-type subunit YP_001475692.1 4840015 D 425104 CDS YP_001475693.1 157377093 5613115 complement(4840552..4841574) 1 NC_009831.1 KEGG: pat:Patl_2703 diguanylate cyclase; diguanylate cyclase 4841574 5613115 Ssed_3961 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475693.1 4840552 R 425104 CDS YP_001475694.1 157377094 5613116 4841853..4844441 1 NC_009831.1 KEGG: slo:Shew_3215 ATPase, P-type (transporting), HAD superfamily, subfamily IC; P-type HAD superfamily ATPase 4844441 5613116 Ssed_3962 Shewanella sediminis HAW-EB3 P-type HAD superfamily ATPase YP_001475694.1 4841853 D 425104 CDS YP_001475695.1 157377095 5613747 complement(4844395..4845279) 1 NC_009831.1 KEGG: sfr:Sfri_2734 hypothetical protein; hypothetical protein 4845279 5613747 Ssed_3963 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475695.1 4844395 R 425104 CDS YP_001475696.1 157377096 5613748 4845402..4846610 1 NC_009831.1 KEGG: slo:Shew_3217 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4846610 5613748 Ssed_3964 Shewanella sediminis HAW-EB3 sodium/hydrogen exchanger YP_001475696.1 4845402 D 425104 CDS YP_001475697.1 157377097 5613749 4846844..4847104 1 NC_009831.1 KEGG: slo:Shew_3214 hypothetical protein; hypothetical protein 4847104 5613749 Ssed_3965 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475697.1 4846844 D 425104 CDS YP_001475698.1 157377098 5613750 complement(4847213..4848583) 1 NC_009831.1 KEGG: fjo:Fjoh_2582 alpha-L-glutamate ligase, RimK family; alpha-L-glutamate ligase 4848583 5613750 Ssed_3966 Shewanella sediminis HAW-EB3 alpha-L-glutamate ligase YP_001475698.1 4847213 R 425104 CDS YP_001475699.1 157377099 5614204 complement(4848849..4853402) 1 NC_009831.1 KEGG: slo:Shew_3218 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L 4853402 5614204 Ssed_3967 Shewanella sediminis HAW-EB3 carbamoyl-phosphate synthase subunit L YP_001475699.1 4848849 R 425104 CDS YP_001475700.1 157377100 5614205 4853524..4854435 1 NC_009831.1 KEGG: slo:Shew_3219 transcriptional regulator, LysR family; LysR family transcriptional regulator 4854435 5614205 Ssed_3968 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475700.1 4853524 D 425104 CDS YP_001475701.1 157377101 5614206 4855081..4856253 1 NC_009831.1 KEGG: slo:Shew_3221 hypothetical protein; hypothetical protein 4856253 5614206 Ssed_3969 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475701.1 4855081 D 425104 CDS YP_001475702.1 157377102 5614207 4856335..4856910 1 NC_009831.1 KEGG: slo:Shew_3222 protein of unknown function DUF335, SprT; hypothetical protein 4856910 5614207 Ssed_3970 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475702.1 4856335 D 425104 CDS YP_001475703.1 157377103 5613973 4857133..4857888 1 NC_009831.1 KEGG: slo:Shew_3223 deoxyribonuclease I; deoxyribonuclease I 4857888 5613973 Ssed_3971 Shewanella sediminis HAW-EB3 deoxyribonuclease I YP_001475703.1 4857133 D 425104 CDS YP_001475704.1 157377104 5613974 4857896..4858627 1 NC_009831.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4858627 5613974 Ssed_3972 Shewanella sediminis HAW-EB3 16S ribosomal RNA methyltransferase RsmE YP_001475704.1 4857896 D 425104 CDS YP_001475705.1 157377105 5613975 4858698..4859648 1 NC_009831.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4859648 5613975 Ssed_3973 Shewanella sediminis HAW-EB3 glutathione synthetase YP_001475705.1 4858698 D 425104 CDS YP_001475706.1 157377106 5613976 4859659..4861032 1 NC_009831.1 KEGG: slo:Shew_3226 alkaline phosphatase; alkaline phosphatase 4861032 5613976 Ssed_3974 Shewanella sediminis HAW-EB3 alkaline phosphatase YP_001475706.1 4859659 D 425104 CDS YP_001475707.1 157377107 5611060 complement(4861067..4863553) 1 NC_009831.1 KEGG: slo:Shew_3227 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 4863553 5611060 Ssed_3975 Shewanella sediminis HAW-EB3 diguanylate cyclase/phosphodiesterase YP_001475707.1 4861067 R 425104 CDS YP_001475708.1 157377108 5611061 complement(4863558..4864739) 1 NC_009831.1 KEGG: slo:Shew_3228 hypothetical protein; hypothetical protein 4864739 5611061 Ssed_3976 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475708.1 4863558 R 425104 CDS YP_001475709.1 157377109 5611062 complement(4864723..4865136) 1 NC_009831.1 KEGG: slo:Shew_3229 hypothetical protein; hypothetical protein 4865136 5611062 Ssed_3977 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475709.1 4864723 R 425104 CDS YP_001475710.1 157377110 5610419 4865578..4866609 1 NC_009831.1 KEGG: slo:Shew_3230 rRNA (guanine-N(2)-)-methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 4866609 5610419 Ssed_3978 Shewanella sediminis HAW-EB3 rRNA (guanine-N(2)-)-methyltransferase YP_001475710.1 4865578 D 425104 CDS YP_001475711.1 157377111 5610420 4866815..4868485 1 NC_009831.1 KEGG: slo:Shew_3231 protein of unknown function DUF342; hypothetical protein 4868485 5610420 Ssed_3979 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475711.1 4866815 D 425104 CDS YP_001475712.1 157377112 5610421 4868650..4869822 1 NC_009831.1 KEGG: slo:Shew_3232 peptidase M50; peptidase M50 4869822 5610421 Ssed_3980 Shewanella sediminis HAW-EB3 peptidase M50 YP_001475712.1 4868650 D 425104 CDS YP_001475713.1 157377113 5610422 4869972..4870934 1 NC_009831.1 KEGG: slo:Shew_3242 transcriptional regulator, LysR family; LysR family transcriptional regulator 4870934 5610422 Ssed_3981 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475713.1 4869972 D 425104 CDS YP_001475714.1 157377114 5614146 complement(4871181..4874261) 1 NC_009831.1 KEGG: slo:Shew_3243 molydopterin dinucleotide-binding region; molydopterin dinucleotide-binding region 4874261 5614146 Ssed_3982 Shewanella sediminis HAW-EB3 molydopterin dinucleotide-binding region YP_001475714.1 4871181 R 425104 CDS YP_001475715.1 157377115 5614147 complement(4874266..4874982) 1 NC_009831.1 KEGG: slo:Shew_3244 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4874982 5614147 Ssed_3983 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475715.1 4874266 R 425104 CDS YP_001475716.1 157377116 5614148 complement(4874992..4875888) 1 NC_009831.1 KEGG: slo:Shew_3245 polysulphide reductase, NrfD; polysulfide reductase, NrfD 4875888 5614148 Ssed_3984 Shewanella sediminis HAW-EB3 polysulfide reductase, NrfD YP_001475716.1 4874992 R 425104 CDS YP_001475717.1 157377117 5614149 4876511..4877188 1 NC_009831.1 KEGG: slo:Shew_3246 hypothetical protein; hypothetical protein 4877188 5614149 Ssed_3985 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475717.1 4876511 D 425104 CDS YP_001475718.1 157377118 5613517 complement(4877720..4879105) 1 NC_009831.1 KEGG: vfi:VFA0209 phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 4879105 5613517 Ssed_3986 Shewanella sediminis HAW-EB3 phosphatidylserine decarboxylase YP_001475718.1 4877720 R 425104 CDS YP_001475719.1 157377119 5613518 4879347..4880498 1 NC_009831.1 KEGG: vfi:VFA0208 arylsulfatase regulator (Fe-S oxidoreductase); arylsulfatase 4880498 5613518 Ssed_3987 Shewanella sediminis HAW-EB3 arylsulfatase YP_001475719.1 4879347 D 425104 CDS YP_001475720.1 157377120 5613519 4880602..4881507 1 NC_009831.1 KEGG: vfi:VFA0214 probable transcriptional regulator SyrB; transcriptional regulator SyrB 4881507 5613519 Ssed_3988 Shewanella sediminis HAW-EB3 transcriptional regulator SyrB YP_001475720.1 4880602 D 425104 CDS YP_001475721.1 157377121 5613520 4881722..4883143 1 NC_009831.1 KEGG: rci:RCIX2356 hypothetical protein; hypothetical protein 4883143 5613520 Ssed_3989 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475721.1 4881722 D 425104 CDS YP_001475722.1 157377122 5610460 4883183..4884736 1 NC_009831.1 KEGG: vfi:VFA0213 sulfatase family protein; sulfatase family protein 4884736 5610460 Ssed_3990 Shewanella sediminis HAW-EB3 sulfatase family protein YP_001475722.1 4883183 D 425104 CDS YP_001475723.1 157377123 5610461 4884791..4885429 1 NC_009831.1 KEGG: pin:Ping_0922 hypothetical protein; hypothetical protein 4885429 5610461 Ssed_3991 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475723.1 4884791 D 425104 CDS YP_001475724.1 157377124 5610462 4885570..4886670 1 NC_009831.1 KEGG: ilo:IL0466 RND efflux system membrane fusion protein; RND efflux system membrane fusion protein 4886670 5610462 Ssed_3992 Shewanella sediminis HAW-EB3 RND efflux system membrane fusion protein YP_001475724.1 4885570 D 425104 CDS YP_001475725.1 157377125 5610463 4886670..4889747 1 NC_009831.1 KEGG: pha:PSHAb0438 metabolite exporter, AcrB/D/F family; AcrB/AcrD/AcrF family metabolite exporter 4889747 5610463 Ssed_3993 Shewanella sediminis HAW-EB3 AcrB/AcrD/AcrF family metabolite exporter YP_001475725.1 4886670 D 425104 CDS YP_001475726.1 157377126 5610206 4889774..4890889 1 NC_009831.1 KEGG: vpa:VPA0472 long-chain fatty acid transport protein; long-chain fatty acid ABC transporter 4890889 5610206 Ssed_3994 Shewanella sediminis HAW-EB3 long-chain fatty acid ABC transporter YP_001475726.1 4889774 D 425104 CDS YP_001475727.1 157377127 5610207 complement(4891430..4893394) 1 NC_009831.1 hypothetical protein 4893394 5610207 Ssed_3995 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475727.1 4891430 R 425104 CDS YP_001475728.1 157377128 5610208 complement(4893419..4893976) 1 NC_009831.1 hypothetical protein 4893976 5610208 Ssed_3996 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475728.1 4893419 R 425104 CDS YP_001475729.1 157377129 5610209 4894330..4895082 1 NC_009831.1 hypothetical protein 4895082 5610209 Ssed_3997 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475729.1 4894330 D 425104 CDS YP_001475730.1 157377130 5611071 complement(4895747..4896505) 1 NC_009831.1 KEGG: son:SO3627 transcriptional regulator, TetR family; hypothetical protein 4896505 5611071 Ssed_3998 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475730.1 4895747 R 425104 CDS YP_001475731.1 157377131 5611072 4896767..4897369 1 NC_009831.1 KEGG: ecv:APECO1_3374 disulfide isomerase; disulfide isomerase 4897369 5611072 Ssed_3999 Shewanella sediminis HAW-EB3 disulfide isomerase YP_001475731.1 4896767 D 425104 CDS YP_001475732.1 157377132 5611073 4897378..4898016 1 NC_009831.1 KEGG: son:SO3870 disulfide bond formation protein; disulfide bond formation protein 4898016 5611073 Ssed_4000 Shewanella sediminis HAW-EB3 disulfide bond formation protein YP_001475732.1 4897378 D 425104 CDS YP_001475733.1 157377133 5611074 4898273..4900048 1 NC_009831.1 KEGG: son:SO3872 arylsulfate sulfotransferase; arylsulfate sulfotransferase 4900048 5611074 Ssed_4001 Shewanella sediminis HAW-EB3 arylsulfate sulfotransferase YP_001475733.1 4898273 D 425104 CDS YP_001475734.1 157377134 5611148 4900105..4900887 1 NC_009831.1 KEGG: shw:Sputw3181_0117 hypothetical protein; hypothetical protein 4900887 5611148 Ssed_4002 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475734.1 4900105 D 425104 CDS YP_001475735.1 157377135 5609739 4901524..4901652 1 NC_009831.1 KEGG: slo:Shew_3247 hypothetical protein; hypothetical protein 4901652 5609739 Ssed_4003 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475735.1 4901524 D 425104 CDS YP_001475736.1 157377136 5611150 complement(4901816..4902427) 1 NC_009831.1 KEGG: slo:Shew_3248 hypothetical protein; hypothetical protein 4902427 5611150 Ssed_4004 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475736.1 4901816 R 425104 CDS YP_001475737.1 157377137 5610427 4902667..4904304 1 NC_009831.1 KEGG: slo:Shew_3249 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4904304 5610427 Ssed_4005 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001475737.1 4902667 D 425104 CDS YP_001475738.1 157377138 5610428 complement(4904336..4905565) 1 NC_009831.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 4905565 5610428 Ssed_4006 Shewanella sediminis HAW-EB3 peptidase T YP_001475738.1 4904336 R 425104 CDS YP_001475739.1 157377139 5610429 complement(4905837..4906652) 1 NC_009831.1 KEGG: slo:Shew_3251 UBA/ThiF-type NAD/FAD binding protein; UBA/ThiF-type NAD/FAD binding protein 4906652 5610429 Ssed_4007 Shewanella sediminis HAW-EB3 UBA/ThiF-type NAD/FAD binding protein YP_001475739.1 4905837 R 425104 CDS YP_001475740.1 157377140 5610430 4907148..4908212 1 NC_009831.1 KEGG: slo:Shew_3252 porin, gram-negative type; porin 4908212 5610430 Ssed_4008 Shewanella sediminis HAW-EB3 porin YP_001475740.1 4907148 D 425104 CDS YP_001475741.1 157377141 5610509 4908815..4909843 1 NC_009831.1 KEGG: slo:Shew_3260 porin, gram-negative type; porin 4909843 5610509 Ssed_4009 Shewanella sediminis HAW-EB3 porin YP_001475741.1 4908815 D 425104 CDS YP_001475742.1 157377142 5610510 complement(4909940..4910620) 1 NC_009831.1 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase 4910620 5610510 Ssed_4010 Shewanella sediminis HAW-EB3 thiopurine S-methyltransferase YP_001475742.1 4909940 R 425104 CDS YP_001475743.1 157377143 5610511 complement(4910815..4911159) 1 NC_009831.1 KEGG: slo:Shew_3262 hypothetical protein; hypothetical protein 4911159 5610511 Ssed_4011 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475743.1 4910815 R 425104 CDS YP_001475744.1 157377144 5610512 4911460..4913280 1 NC_009831.1 KEGG: slo:Shew_3263 serine/threonine protein kinase; serine/threonine protein kinase 4913280 5610512 Ssed_4012 Shewanella sediminis HAW-EB3 serine/threonine protein kinase YP_001475744.1 4911460 D 425104 CDS YP_001475745.1 157377145 5611918 complement(4913292..4913867) 1 NC_009831.1 KEGG: slo:Shew_3264 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 4913867 5611918 Ssed_4013 Shewanella sediminis HAW-EB3 FxsA cytoplasmic membrane protein YP_001475745.1 4913292 R 425104 CDS YP_001475746.1 157377146 5611919 4914165..4914503 1 NC_009831.1 KEGG: shw:Sputw3181_0695 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 4914503 5611919 Ssed_4014 Shewanella sediminis HAW-EB3 CutA1 divalent ion tolerance protein YP_001475746.1 4914165 D 425104 CDS YP_001475747.1 157377147 5611920 4914500..4916335 1 NC_009831.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 4916335 dipZ 5611920 dipZ Shewanella sediminis HAW-EB3 thiol:disulfide interchange protein YP_001475747.1 4914500 D 425104 CDS YP_001475748.1 157377148 5611921 4916606..4918231 1 NC_009831.1 KEGG: slo:Shew_3267 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4918231 5611921 Ssed_4016 Shewanella sediminis HAW-EB3 sodium/hydrogen exchanger YP_001475748.1 4916606 D 425104 CDS YP_001475749.1 157377149 5612505 4918311..4919381 1 NC_009831.1 KEGG: slo:Shew_3268 hypothetical protein; hypothetical protein 4919381 5612505 Ssed_4017 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475749.1 4918311 D 425104 CDS YP_001475750.1 157377150 5612506 4919430..4922609 1 NC_009831.1 KEGG: slo:Shew_3269 beta-galactosidase; beta-galactosidase 4922609 5612506 Ssed_4018 Shewanella sediminis HAW-EB3 beta-galactosidase YP_001475750.1 4919430 D 425104 CDS YP_001475751.1 157377151 5612507 4922690..4924114 1 NC_009831.1 KEGG: slo:Shew_3270 SSS sodium solute transporter superfamily; SSS family solute/sodium (Na+) symporter 4924114 5612507 Ssed_4019 Shewanella sediminis HAW-EB3 SSS family solute/sodium (Na+) symporter YP_001475751.1 4922690 D 425104 CDS YP_001475752.1 157377152 5612508 4924342..4925508 1 NC_009831.1 KEGG: slo:Shew_3271 galactokinase; galactokinase 4925508 5612508 Ssed_4020 Shewanella sediminis HAW-EB3 galactokinase YP_001475752.1 4924342 D 425104 CDS YP_001475753.1 157377153 5610827 4925581..4926600 1 NC_009831.1 KEGG: slo:Shew_3272 aldose 1-epimerase; aldose 1-epimerase 4926600 5610827 Ssed_4021 Shewanella sediminis HAW-EB3 aldose 1-epimerase YP_001475753.1 4925581 D 425104 CDS YP_001475754.1 157377154 5610828 complement(4926658..4927113) 1 NC_009831.1 KEGG: shw:Sputw3181_0690 hypothetical protein; hypothetical protein 4927113 5610828 Ssed_4022 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475754.1 4926658 R 425104 CDS YP_001475755.1 157377155 5610829 complement(4927590..4928627) 1 NC_009831.1 KEGG: shw:Sputw3181_0689 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4928627 5610829 Ssed_4023 Shewanella sediminis HAW-EB3 alcohol dehydrogenase YP_001475755.1 4927590 R 425104 CDS YP_001475756.1 157377156 5610830 complement(4928800..4930662) 1 NC_009831.1 KEGG: gme:Gmet_0536 cytochrome c family protein; hypothetical protein 4930662 5610830 Ssed_4024 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475756.1 4928800 R 425104 CDS YP_001475757.1 157377157 5613986 complement(4930999..4931694) 1 NC_009831.1 KEGG: slo:Shew_0535 single-strand binding protein; single-strand binding protein 4931694 5613986 Ssed_4025 Shewanella sediminis HAW-EB3 single-strand binding protein YP_001475757.1 4930999 R 425104 CDS YP_001475758.1 157377158 5613987 complement(4931825..4933192) 1 NC_009831.1 KEGG: slo:Shew_0534 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4933192 5613987 Ssed_4026 Shewanella sediminis HAW-EB3 major facilitator superfamily transporter YP_001475758.1 4931825 R 425104 CDS YP_001475759.1 157377159 5613988 4933462..4936299 1 NC_009831.1 KEGG: slo:Shew_0533 excinuclease ABC, A subunit; excinuclease ABC subunit A 4936299 5613988 Ssed_4027 Shewanella sediminis HAW-EB3 excinuclease ABC subunit A YP_001475759.1 4933462 D 425104 CDS YP_001475760.1 157377160 5613989 4936532..4937593 1 NC_009831.1 KEGG: slo:Shew_0532 peptidase M28; peptidase M28 4937593 5613989 Ssed_4028 Shewanella sediminis HAW-EB3 peptidase M28 YP_001475760.1 4936532 D 425104 CDS YP_001475761.1 157377161 5610007 4937831..4939663 1 NC_009831.1 KEGG: slo:Shew_0531 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4939663 5610007 Ssed_4029 Shewanella sediminis HAW-EB3 DEAD/DEAH box helicase YP_001475761.1 4937831 D 425104 CDS YP_001475762.1 157377162 5610008 4939986..4940939 1 NC_009831.1 KEGG: pha:PSHAa0139 hypothetical protein; hypothetical protein 4940939 5610008 Ssed_4030 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475762.1 4939986 D 425104 CDS YP_001475763.1 157377163 5610009 complement(4941004..4941546) 1 NC_009831.1 KEGG: mmr:Mmar10_0335 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4941546 5610009 Ssed_4031 Shewanella sediminis HAW-EB3 glyoxalase/bleomycin resistance protein/dioxygenase YP_001475763.1 4941004 R 425104 CDS YP_001475764.1 157377164 5610010 4941739..4942227 1 NC_009831.1 KEGG: bja:blr2331 transcriptional regulatory protein; transcriptional regulator 4942227 5610010 Ssed_4032 Shewanella sediminis HAW-EB3 transcriptional regulator YP_001475764.1 4941739 D 425104 CDS YP_001475765.1 157377165 5612707 complement(4942231..4942653) 1 NC_009831.1 hypothetical protein 4942653 5612707 Ssed_4033 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475765.1 4942231 R 425104 CDS YP_001475766.1 157377166 5612708 4942997..4943404 1 NC_009831.1 KEGG: cps:CPS_4631 hypothetical protein; hypothetical protein 4943404 5612708 Ssed_4034 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475766.1 4942997 D 425104 CDS YP_001475767.1 157377167 5612709 4943828..4944661 1 NC_009831.1 KEGG: slo:Shew_0527 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 4944661 5612709 Ssed_4035 Shewanella sediminis HAW-EB3 Sel1 domain-containing protein YP_001475767.1 4943828 D 425104 CDS YP_001475768.1 157377168 5612710 complement(4944704..4945534) 1 NC_009831.1 KEGG: dra:DR_0450 hypothetical protein; hypothetical protein 4945534 5612710 Ssed_4036 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475768.1 4944704 R 425104 CDS YP_001475769.1 157377169 5610109 complement(4945596..4945832) 1 NC_009831.1 KEGG: slo:Shew_0525 hypothetical protein; hypothetical protein 4945832 5610109 Ssed_4037 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475769.1 4945596 R 425104 CDS YP_001475770.1 157377170 5610110 complement(4946073..4946450) 1 NC_009831.1 KEGG: slo:Shew_0526 hypothetical protein; hypothetical protein 4946450 5610110 Ssed_4038 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475770.1 4946073 R 425104 CDS YP_001475771.1 157377171 5610111 complement(4946849..4947739) 1 NC_009831.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 4947739 metF 5610111 metF Shewanella sediminis HAW-EB3 5,10-methylenetetrahydrofolate reductase YP_001475771.1 4946849 R 425104 CDS YP_001475772.1 157377172 5610112 complement(4948243..4950630) 1 NC_009831.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 4950630 metL 5610112 metL Shewanella sediminis HAW-EB3 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_001475772.1 4948243 R 425104 CDS YP_001475773.1 157377173 5614023 complement(4950643..4951803) 1 NC_009831.1 KEGG: shn:Shewana3_3614 O-succinylhomoserine (thiol)-lyase; cystathionine gamma-synthase 4951803 5614023 Ssed_4041 Shewanella sediminis HAW-EB3 cystathionine gamma-synthase YP_001475773.1 4950643 R 425104 CDS YP_001475774.1 157377174 5614024 4952037..4952351 1 NC_009831.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 4952351 5614024 Ssed_4042 Shewanella sediminis HAW-EB3 transcriptional repressor protein MetJ YP_001475774.1 4952037 D 425104 CDS YP_001475775.1 157377175 5614025 4952473..4953207 1 NC_009831.1 KEGG: sbl:Sbal_3778 protein of unknown function DUF81; hypothetical protein 4953207 5614025 Ssed_4043 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475775.1 4952473 D 425104 CDS YP_001475776.1 157377176 5609868 complement(4953204..4954277) 1 NC_009831.1 KEGG: slo:Shew_0517 plasmid transfer protein; plasmid transfer protein 4954277 5609868 Ssed_4044 Shewanella sediminis HAW-EB3 plasmid transfer protein YP_001475776.1 4953204 R 425104 CDS YP_001475777.1 157377177 5609869 complement(4954488..4955429) 1 NC_009831.1 KEGG: son:SO4060 polysulfide reductase, subunit C; polysulfide reductase, subunit C 4955429 5609869 Ssed_4045 Shewanella sediminis HAW-EB3 polysulfide reductase, subunit C YP_001475777.1 4954488 R 425104 CDS YP_001475778.1 157377178 5609870 complement(4955426..4955998) 1 NC_009831.1 KEGG: slo:Shew_0607 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4955998 5609870 Ssed_4046 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475778.1 4955426 R 425104 CDS YP_001475779.1 157377179 5609871 complement(4956011..4958293) 1 NC_009831.1 KEGG: slo:Shew_0608 molybdopterin oxidoreductase; molybdopterin oxidoreductase 4958293 5609871 Ssed_4047 Shewanella sediminis HAW-EB3 molybdopterin oxidoreductase YP_001475779.1 4956011 R 425104 CDS YP_001475780.1 157377180 5610096 4958725..4960185 1 NC_009831.1 KEGG: aba:Acid345_2134 Fe-S protein, radical SAM family; radical SAM protein 4960185 5610096 Ssed_4048 Shewanella sediminis HAW-EB3 radical SAM protein YP_001475780.1 4958725 D 425104 CDS YP_001475781.1 157377181 5610097 4960201..4961157 1 NC_009831.1 KEGG: ana:all2409 hypothetical protein; hypothetical protein 4961157 5610097 Ssed_4049 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475781.1 4960201 D 425104 CDS YP_001475782.1 157377182 5610098 4961154..4961939 1 NC_009831.1 KEGG: stp:Strop_2596 methyltransferase type 11; ubiquinone/menaquinone biosynthesis methyltransferase 4961939 5610098 Ssed_4050 Shewanella sediminis HAW-EB3 ubiquinone/menaquinone biosynthesis methyltransferase YP_001475782.1 4961154 D 425104 CDS YP_001475783.1 157377183 5610099 complement(4962039..4962377) 1 NC_009831.1 KEGG: ppr:PBPRA2631 hypothetical protein; hypothetical protein 4962377 5610099 Ssed_4051 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475783.1 4962039 R 425104 CDS YP_001475784.1 157377184 5610038 complement(4962456..4963601) 1 NC_009831.1 catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 4963601 5610038 Ssed_4052 Shewanella sediminis HAW-EB3 nitric oxide reductase YP_001475784.1 4962456 R 425104 CDS YP_001475785.1 157377185 5610039 complement(4963598..4965094) 1 NC_009831.1 detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 4965094 5610039 Ssed_4053 Shewanella sediminis HAW-EB3 anaerobic nitric oxide reductase flavorubredoxin YP_001475785.1 4963598 R 425104 CDS YP_001475786.1 157377186 5610040 4965487..4965684 1 NC_009831.1 KEGG: cps:CPS_1698 hypothetical protein; hypothetical protein 4965684 5610040 Ssed_4054 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475786.1 4965487 D 425104 CDS YP_001475787.1 157377187 5610041 4965755..4966339 1 NC_009831.1 KEGG: vco:VC0395_0403 methyltransferase; methyltransferase 4966339 5610041 Ssed_4055 Shewanella sediminis HAW-EB3 methyltransferase YP_001475787.1 4965755 D 425104 CDS YP_001475788.1 157377188 5609774 complement(4966399..4967298) 1 NC_009831.1 KEGG: cps:CPS_4936 substrate-binding transcriptional regulator, LysR family; LysR family substrate binding transcriptional regulator 4967298 5609774 Ssed_4056 Shewanella sediminis HAW-EB3 LysR family substrate binding transcriptional regulator YP_001475788.1 4966399 R 425104 CDS YP_001475789.1 157377189 5609775 4967543..4968262 1 NC_009831.1 KEGG: shn:Shewana3_3687 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4968262 5609775 Ssed_4057 Shewanella sediminis HAW-EB3 short-chain dehydrogenase/reductase SDR YP_001475789.1 4967543 D 425104 CDS YP_001475790.1 157377190 5609776 4968743..4969072 1 NC_009831.1 KEGG: slo:Shew_0516 cytochrome c family protein; cytochrome c family protein 4969072 5609776 Ssed_4058 Shewanella sediminis HAW-EB3 cytochrome c family protein YP_001475790.1 4968743 D 425104 CDS YP_001475791.1 157377191 5609777 4969287..4970999 1 NC_009831.1 KEGG: slo:Shew_0515 hypothetical protein; hypothetical protein 4970999 5609777 Ssed_4059 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475791.1 4969287 D 425104 CDS YP_001475792.1 157377192 5610292 4971045..4972448 1 NC_009831.1 KEGG: slo:Shew_0514 cytochrome c; cytochrome c 4972448 5610292 Ssed_4060 Shewanella sediminis HAW-EB3 cytochrome c YP_001475792.1 4971045 D 425104 CDS YP_001475793.1 157377193 5610293 4972744..4973925 1 NC_009831.1 KEGG: slo:Shew_0508 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4973925 5610293 Ssed_4061 Shewanella sediminis HAW-EB3 xanthine/uracil/vitamin C permease YP_001475793.1 4972744 D 425104 CDS YP_001475794.1 157377194 5610294 complement(4974550..4974903) 1 NC_009831.1 KEGG: sdn:Sden_1508 protein of unknown function UPF0153; hypothetical protein 4974903 5610294 Ssed_4062 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475794.1 4974550 R 425104 CDS YP_001475795.1 157377195 5610295 complement(4975186..4976289) 1 NC_009831.1 KEGG: son:SO4153 N-ethylmaleimide reductase; N-ethylmaleimide reductase 4976289 5610295 Ssed_4063 Shewanella sediminis HAW-EB3 N-ethylmaleimide reductase YP_001475795.1 4975186 R 425104 CDS YP_001475796.1 157377196 5612895 4976421..4977335 1 NC_009831.1 KEGG: slo:Shew_0506 transcriptional regulator, LysR family; LysR family transcriptional regulator 4977335 5612895 Ssed_4064 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475796.1 4976421 D 425104 CDS YP_001475797.1 157377197 5612896 complement(4977427..4977885) 1 NC_009831.1 KEGG: slo:Shew_0247 hypothetical protein; hypothetical protein 4977885 5612896 Ssed_4065 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475797.1 4977427 R 425104 CDS YP_001475798.1 157377198 5612897 complement(4978201..4980042) 1 NC_009831.1 KEGG: slo:Shew_0610 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4980042 5612897 Ssed_4066 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001475798.1 4978201 R 425104 CDS YP_001475799.1 157377199 5612898 4980256..4980885 1 NC_009831.1 KEGG: slo:Shew_0609 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4980885 5612898 Ssed_4067 Shewanella sediminis HAW-EB3 two component LuxR family transcriptional regulator YP_001475799.1 4980256 D 425104 CDS YP_001475800.1 157377200 5610191 complement(4981206..4982180) 1 NC_009831.1 KEGG: slo:Shew_3341 diguanylate cyclase with GAF sensor; GAF sensor-containing diguanylate cyclase 4982180 5610191 Ssed_4068 Shewanella sediminis HAW-EB3 GAF sensor-containing diguanylate cyclase YP_001475800.1 4981206 R 425104 CDS YP_001475801.1 157377201 5610192 complement(4982465..4983067) 1 NC_009831.1 KEGG: sbl:Sbal_3876 two component transcriptional regulator, fis family; two component Fis family transcriptional regulator 4983067 5610192 Ssed_4069 Shewanella sediminis HAW-EB3 two component Fis family transcriptional regulator YP_001475801.1 4982465 R 425104 CDS YP_001475802.1 157377202 5610193 complement(4983072..4984322) 1 NC_009831.1 KEGG: slo:Shew_3343 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4984322 5610193 Ssed_4070 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001475802.1 4983072 R 425104 CDS YP_001475803.1 157377203 5610194 complement(4984339..4985124) 1 NC_009831.1 KEGG: mxa:MXAN_1009 lipoprotein; hypothetical protein 4985124 5610194 Ssed_4071 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475803.1 4984339 R 425104 CDS YP_001475804.1 157377204 5610268 4985215..4987200 1 NC_009831.1 KEGG: slo:Shew_3347 hypothetical protein; hypothetical protein 4987200 5610268 Ssed_4072 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475804.1 4985215 D 425104 CDS YP_001475805.1 157377205 5610269 complement(4987263..4988201) 1 NC_009831.1 KEGG: shn:Shewana3_3712 pseudouridine synthase; pseudouridine synthase 4988201 5610269 Ssed_4073 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001475805.1 4987263 R 425104 CDS YP_001475806.1 157377206 5610270 complement(4988256..4988831) 1 NC_009831.1 KEGG: shm:Shewmr7_0417 ATP-dependent protease La (LON) domain protein; ATP-dependent protease La 4988831 5610270 Ssed_4074 Shewanella sediminis HAW-EB3 ATP-dependent protease La YP_001475806.1 4988256 R 425104 CDS YP_001475807.1 157377207 5610271 complement(4989014..4990069) 1 NC_009831.1 KEGG: slo:Shew_3350 hypothetical protein; hypothetical protein 4990069 5610271 Ssed_4075 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475807.1 4989014 R 425104 CDS YP_001475808.1 157377208 5610886 4990174..4990608 1 NC_009831.1 hypothetical protein 4990608 5610886 Ssed_4076 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475808.1 4990174 D 425104 CDS YP_001475809.1 157377209 5610887 4990730..4991191 1 NC_009831.1 KEGG: slo:Shew_3353 conserved hypothetical protein 22; hypothetical protein 4991191 5610887 Ssed_4077 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475809.1 4990730 D 425104 CDS YP_001475810.1 157377210 5610888 4991233..4991769 1 NC_009831.1 KEGG: sfr:Sfri_3576 hypothetical protein; hypothetical protein 4991769 5610888 Ssed_4078 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475810.1 4991233 D 425104 CDS YP_001475811.1 157377211 5609932 4992251..4992715 1 NC_009831.1 KEGG: aae:aq_1599 hypothetical protein; hypothetical protein 4992715 5609932 Ssed_4079 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475811.1 4992251 D 425104 CDS YP_001475812.1 157377212 5609933 complement(4992904..4993791) 1 NC_009831.1 KEGG: sfr:Sfri_3467 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 4993791 5609933 Ssed_4080 Shewanella sediminis HAW-EB3 cation diffusion facilitator family transporter YP_001475812.1 4992904 R 425104 CDS YP_001475813.1 157377213 5609934 complement(4994147..4997395) 1 NC_009831.1 KEGG: slo:Shew_3356 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 4997395 5609934 Ssed_4081 Shewanella sediminis HAW-EB3 CzcA family heavy metal efflux protein YP_001475813.1 4994147 R 425104 CDS YP_001475814.1 157377214 5609935 complement(4997444..4998811) 1 NC_009831.1 KEGG: slo:Shew_3357 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4998811 5609935 Ssed_4082 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001475814.1 4997444 R 425104 CDS YP_001475815.1 157377215 5613777 complement(4998830..5000161) 1 NC_009831.1 KEGG: slo:Shew_3358 outer membrane efflux family protein; outer membrane efflux family protein 5000161 5613777 Ssed_4083 Shewanella sediminis HAW-EB3 outer membrane efflux family protein YP_001475815.1 4998830 R 425104 CDS YP_001475816.1 157377216 5613778 complement(5000376..5000852) 1 NC_009831.1 KEGG: slo:Shew_3359 hypothetical protein; hypothetical protein 5000852 5613778 Ssed_4084 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475816.1 5000376 R 425104 CDS YP_001475817.1 157377217 5613779 complement(5000984..5001187) 1 NC_009831.1 KEGG: she:Shewmr4_0514 hypothetical protein; hypothetical protein 5001187 5613779 Ssed_4085 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475817.1 5000984 R 425104 CDS YP_001475818.1 157377218 5613780 complement(5001310..5001675) 1 NC_009831.1 KEGG: shn:Shewana3_0513 hypothetical protein; hypothetical protein 5001675 5613780 Ssed_4086 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475818.1 5001310 R 425104 CDS YP_001475819.1 157377219 5613657 5002058..5002486 1 NC_009831.1 KEGG: shw:Sputw3181_0594 class I peptide chain release factor; peptidyl-tRNA hydrolase domain-containing protein 5002486 5613657 Ssed_4087 Shewanella sediminis HAW-EB3 peptidyl-tRNA hydrolase domain-containing protein YP_001475819.1 5002058 D 425104 CDS YP_001475820.1 157377220 5613658 5002722..5003177 1 NC_009831.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 5003177 5613658 Ssed_4088 Shewanella sediminis HAW-EB3 3-dehydroquinate dehydratase YP_001475820.1 5002722 D 425104 CDS YP_001475821.1 157377221 5613659 5003270..5003806 1 NC_009831.1 KEGG: sdy:SDY_3432 acetylCoA carboxylase, BccP subunit; acetylCoA carboxylase, BccP subunit 5003806 5613659 Ssed_4089 Shewanella sediminis HAW-EB3 acetylCoA carboxylase, BccP subunit YP_001475821.1 5003270 D 425104 CDS YP_001475822.1 157377222 5613660 5003935..5005305 1 NC_009831.1 KEGG: ilo:IL2286 acetyl CoA carboxylase, biotin carboxylase subunit; acetyl CoA carboxylase, biotin carboxylase subunit 5005305 5613660 Ssed_4090 Shewanella sediminis HAW-EB3 acetyl CoA carboxylase, biotin carboxylase subunit YP_001475822.1 5003935 D 425104 CDS YP_001475823.1 157377223 5610609 complement(5005338..5008520) 1 NC_009831.1 KEGG: slo:Shew_3366 metal dependent phosphohydrolase; metal dependent phosphohydrolase 5008520 5610609 Ssed_4091 Shewanella sediminis HAW-EB3 metal dependent phosphohydrolase YP_001475823.1 5005338 R 425104 CDS YP_001475824.1 157377224 5610610 complement(5008594..5009205) 1 NC_009831.1 KEGG: saz:Sama_3100 hypothetical protein; hypothetical protein 5009205 5610610 Ssed_4092 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475824.1 5008594 R 425104 CDS YP_001475825.1 157377225 5610611 complement(5009532..5009780) 1 NC_009831.1 KEGG: slo:Shew_3369 hypothetical protein; hypothetical protein 5009780 5610611 Ssed_4093 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475825.1 5009532 R 425104 CDS YP_001475826.1 157377226 5610612 5010117..5010602 1 NC_009831.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 5010602 5610612 Ssed_4094 Shewanella sediminis HAW-EB3 ribonuclease activity regulator protein RraA YP_001475826.1 5010117 D 425104 CDS YP_001475827.1 157377227 5610472 5010839..5011882 1 NC_009831.1 KEGG: slo:Shew_3372 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 5011882 5610472 Ssed_4095 Shewanella sediminis HAW-EB3 arginase/agmatinase/formiminoglutamase YP_001475827.1 5010839 D 425104 CDS YP_001475828.1 157377228 5610473 5012128..5012883 1 NC_009831.1 KEGG: slo:Shew_3373 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 5012883 5610473 Ssed_4096 Shewanella sediminis HAW-EB3 ubiquinone/menaquinone biosynthesis methyltransferase YP_001475828.1 5012128 D 425104 CDS YP_001475829.1 157377229 5610474 5012895..5013518 1 NC_009831.1 KEGG: slo:Shew_3374 protein of unknown function DUF1243; hypothetical protein 5013518 5610474 Ssed_4097 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475829.1 5012895 D 425104 CDS YP_001475830.1 157377230 5610475 5013515..5015164 1 NC_009831.1 KEGG: slo:Shew_3375 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 5015164 5610475 Ssed_4098 Shewanella sediminis HAW-EB3 2-polyprenylphenol 6-hydroxylase YP_001475830.1 5013515 D 425104 CDS YP_001475831.1 157377231 5612169 5015224..5015460 1 NC_009831.1 KEGG: slo:Shew_3376 twin-arginine translocation protein, TatA/E family subunit; twin arginine-targeting protein translocase 5015460 5612169 Ssed_4099 Shewanella sediminis HAW-EB3 twin arginine-targeting protein translocase YP_001475831.1 5015224 D 425104 CDS YP_001475832.1 157377232 5612170 5015467..5015865 1 NC_009831.1 KEGG: slo:Shew_3377 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 5015865 5612170 Ssed_4100 Shewanella sediminis HAW-EB3 twin-arginine translocation protein subunit TatB YP_001475832.1 5015467 D 425104 CDS YP_001475833.1 157377233 5612171 5015869..5016636 1 NC_009831.1 KEGG: slo:Shew_3378 sec-independent protein translocase, TatC subunit; sec-independent protein translocase, TatC subunit 5016636 5612171 Ssed_4101 Shewanella sediminis HAW-EB3 sec-independent protein translocase, TatC subunit YP_001475833.1 5015869 D 425104 CDS YP_001475834.1 157377234 5612172 5016696..5017235 1 NC_009831.1 KEGG: sbl:Sbal_3901 hypothetical protein; hypothetical protein 5017235 5612172 Ssed_4102 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475834.1 5016696 D 425104 CDS YP_001475835.1 157377235 5613133 5017235..5018029 1 NC_009831.1 KEGG: shn:Shewana3_3732 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 5018029 5613133 Ssed_4103 Shewanella sediminis HAW-EB3 TatD-related deoxyribonuclease YP_001475835.1 5017235 D 425104 CDS YP_001475836.1 157377236 5613134 5018065..5019897 1 NC_009831.1 KEGG: slo:Shew_3381 diguanylate cyclase; diguanylate cyclase 5019897 5613134 Ssed_4104 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475836.1 5018065 D 425104 CDS YP_001475837.1 157377237 5613135 5020015..5021031 1 NC_009831.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 5021031 5613135 Ssed_4105 Shewanella sediminis HAW-EB3 delta-aminolevulinic acid dehydratase YP_001475837.1 5020015 D 425104 CDS YP_001475838.1 157377238 5613136 5021328..5021867 1 NC_009831.1 KEGG: shw:Sputw3181_0509 hypothetical protein; hypothetical protein 5021867 5613136 Ssed_4106 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475838.1 5021328 D 425104 CDS YP_001475839.1 157377239 5612078 complement(5021924..5024908) 1 NC_009831.1 KEGG: cps:CPS_4791 oar protein; oar protein 5024908 5612078 Ssed_4107 Shewanella sediminis HAW-EB3 oar protein YP_001475839.1 5021924 R 425104 CDS YP_001475840.1 157377240 5612079 complement(5025274..5026191) 1 NC_009831.1 KEGG: slo:Shew_0340 Ppx/GppA phosphatase; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 5026191 5612079 Ssed_4108 Shewanella sediminis HAW-EB3 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_001475840.1 5025274 R 425104 CDS YP_001475841.1 157377241 5612080 complement(5026203..5027510) 1 NC_009831.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 5027510 5612080 Ssed_4109 Shewanella sediminis HAW-EB3 ATP-dependent RNA helicase RhlB YP_001475841.1 5026203 R 425104 CDS YP_001475842.1 157377242 5612081 5027685..5028011 1 NC_009831.1 KEGG: shn:Shewana3_0409 thioredoxin; thioredoxin 5028011 5612081 Ssed_4110 Shewanella sediminis HAW-EB3 thioredoxin YP_001475842.1 5027685 D 425104 CDS YP_001475843.1 157377243 5609767 5028267..5029532 1 NC_009831.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 5029532 rho 5609767 rho Shewanella sediminis HAW-EB3 transcription termination factor Rho YP_001475843.1 5028267 D 425104 CDS YP_001475844.1 157377244 5609768 complement(5029811..5030713) 1 NC_009831.1 KEGG: slo:Shew_0336 transcriptional regulator, LysR family; LysR family transcriptional regulator 5030713 5609768 Ssed_4112 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475844.1 5029811 R 425104 CDS YP_001475845.1 157377245 5609769 complement(5030827..5031558) 1 NC_009831.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 5031558 frdB 5609769 frdB Shewanella sediminis HAW-EB3 fumarate reductase iron-sulfur subunit YP_001475845.1 5030827 R 425104 CDS YP_001475846.1 157377246 5610239 complement(5031555..5033579) 1 NC_009831.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 5033579 5610239 Ssed_4114 Shewanella sediminis HAW-EB3 fumarate reductase flavoprotein subunit YP_001475846.1 5031555 R 425104 CDS YP_001475847.1 157377247 5610240 complement(5033691..5034359) 1 NC_009831.1 KEGG: slo:Shew_0333 fumarate reductase respiratory complex, transmembrane subunit; fumarate reductase respiratory complex, transmembrane subunit 5034359 5610240 Ssed_4115 Shewanella sediminis HAW-EB3 fumarate reductase respiratory complex, transmembrane subunit YP_001475847.1 5033691 R 425104 CDS YP_001475848.1 157377248 5610241 complement(5034518..5035243) 1 NC_009831.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 5035243 5610241 Ssed_4116 Shewanella sediminis HAW-EB3 fumarate reductase cytochrome b-556 subunit YP_001475848.1 5034518 R 425104 CDS YP_001475849.1 157377249 5610242 5035768..5036649 1 NC_009831.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 5036649 prmA 5610242 prmA Shewanella sediminis HAW-EB3 50S ribosomal protein L11 methyltransferase YP_001475849.1 5035768 D 425104 CDS YP_001475850.1 157377250 5611432 5036801..5037769 1 NC_009831.1 KEGG: slo:Shew_0330 TIM-barrel protein, nifR3 family; nifR3 family TIM-barrel protein 5037769 5611432 Ssed_4118 Shewanella sediminis HAW-EB3 nifR3 family TIM-barrel protein YP_001475850.1 5036801 D 425104 CDS YP_001475851.1 157377251 5611433 5037788..5038093 1 NC_009831.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 5038093 fis 5611433 fis Shewanella sediminis HAW-EB3 DNA-binding protein Fis YP_001475851.1 5037788 D 425104 CDS YP_001475852.1 157377252 5611434 complement(5038804..5040273) 1 NC_009831.1 KEGG: dsy:DSY2839 tetrachloroethene dehalogenase; hypothetical protein 5040273 5611434 Ssed_4120 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475852.1 5038804 R 425104 CDS YP_001475853.1 157377253 5611435 complement(5040325..5040954) 1 NC_009831.1 KEGG: tcx:Tcr_1026 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 5040954 5611435 Ssed_4121 Shewanella sediminis HAW-EB3 peptidylprolyl isomerase, FKBP-type YP_001475853.1 5040325 R 425104 CDS YP_001475854.1 157377254 5613453 complement(5041002..5041511) 1 NC_009831.1 KEGG: sfr:Sfri_2910 cytochrome c, class II; hypothetical protein 5041511 5613453 Ssed_4122 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475854.1 5041002 R 425104 CDS YP_001475855.1 157377255 5613454 5041796..5042365 1 NC_009831.1 KEGG: dar:Daro_1210 regulatory protein, TetR; hypothetical protein 5042365 5613454 Ssed_4123 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475855.1 5041796 D 425104 CDS YP_001475856.1 157377256 5613455 5042477..5043187 1 NC_009831.1 KEGG: slo:Shew_0328 protein of unknown function DUF542, ScdA domain protein; hypothetical protein 5043187 5613455 Ssed_4124 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475856.1 5042477 D 425104 CDS YP_001475857.1 157377257 5613456 complement(5043253..5043831) 1 NC_009831.1 KEGG: son:SO4304 urease accessory protein UreJ; urease accessory protein UreJ 5043831 5613456 Ssed_4125 Shewanella sediminis HAW-EB3 urease accessory protein UreJ YP_001475857.1 5043253 R 425104 CDS YP_001475858.1 157377258 5610841 complement(5043931..5044653) 1 NC_009831.1 KEGG: slo:Shew_0326 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 5044653 5610841 Ssed_4126 Shewanella sediminis HAW-EB3 HAD family hydrolase YP_001475858.1 5043931 R 425104 CDS YP_001475859.1 157377259 5610842 complement(5044653..5045558) 1 NC_009831.1 KEGG: slo:Shew_0325 tyrosine recombinase XerC; tyrosine recombinase XerC 5045558 5610842 Ssed_4127 Shewanella sediminis HAW-EB3 tyrosine recombinase XerC YP_001475859.1 5044653 R 425104 CDS YP_001475860.1 157377260 5610843 complement(5045721..5046359) 1 NC_009831.1 KEGG: slo:Shew_0324 protein of unknown function DUF484; hypothetical protein 5046359 5610843 Ssed_4128 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475860.1 5045721 R 425104 CDS YP_001475861.1 157377261 5610844 complement(5046356..5047198) 1 NC_009831.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 5047198 dapF 5610844 dapF Shewanella sediminis HAW-EB3 diaminopimelate epimerase YP_001475861.1 5046356 R 425104 CDS YP_001475862.1 157377262 5613129 complement(5047285..5048529) 1 NC_009831.1 KEGG: spc:Sputcn32_3583 diaminopimelate decarboxylase; diaminopimelate decarboxylase 5048529 5613129 Ssed_4130 Shewanella sediminis HAW-EB3 diaminopimelate decarboxylase YP_001475862.1 5047285 R 425104 CDS YP_001475863.1 157377263 5613130 5048934..5049263 1 NC_009831.1 KEGG: shw:Sputw3181_3724 frataxin family protein; frataxin family protein 5049263 5613130 Ssed_4131 Shewanella sediminis HAW-EB3 frataxin family protein YP_001475863.1 5048934 D 425104 CDS YP_001475864.1 157377264 5613131 complement(5049602..5052025) 1 NC_009831.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 5052025 cyaA 5613131 cyaA Shewanella sediminis HAW-EB3 adenylate cyclase YP_001475864.1 5049602 R 425104 CDS YP_001475865.1 157377265 5613132 5052227..5053156 1 NC_009831.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 5053156 hemC 5613132 hemC Shewanella sediminis HAW-EB3 porphobilinogen deaminase YP_001475865.1 5052227 D 425104 CDS YP_001475866.1 157377266 5613190 5053183..5053917 1 NC_009831.1 KEGG: shw:Sputw3181_3727 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 5053917 5613190 Ssed_4134 Shewanella sediminis HAW-EB3 uroporphyrinogen III synthase HEM4 YP_001475866.1 5053183 D 425104 CDS YP_001475867.1 157377267 5613191 5054032..5055183 1 NC_009831.1 KEGG: slo:Shew_0316 protein of unknown function DUF513, HemX; hypothetical protein 5055183 5613191 Ssed_4135 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475867.1 5054032 D 425104 CDS YP_001475868.1 157377268 5613192 5055180..5056349 1 NC_009831.1 KEGG: slo:Shew_0315 HemY domain protein; HemY domain-containing protein 5056349 5613192 Ssed_4136 Shewanella sediminis HAW-EB3 HemY domain-containing protein YP_001475868.1 5055180 D 425104 CDS YP_001475869.1 157377269 5613193 5056631..5061430 1 NC_009831.1 KEGG: slo:Shew_0314 outer membrane adhesin like proteiin; outer membrane adhesin-like protein 5061430 5613193 Ssed_4137 Shewanella sediminis HAW-EB3 outer membrane adhesin-like protein YP_001475869.1 5056631 D 425104 CDS YP_001475870.1 157377270 5613063 5061859..5071407 1 NC_009831.1 KEGG: pub:SAR11_0932 hypothetical protein; hypothetical protein 5071407 5613063 Ssed_4138 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475870.1 5061859 D 425104 CDS YP_001475871.1 157377271 5613064 5071740..5084108 1 NC_009831.1 KEGG: slo:Shew_0313 outer membrane adhesin like proteiin; outer membrane adhesin-like protein 5084108 5613064 Ssed_4139 Shewanella sediminis HAW-EB3 outer membrane adhesin-like protein YP_001475871.1 5071740 D 425104 CDS YP_001475872.1 157377272 5613065 5084217..5086397 1 NC_009831.1 KEGG: slo:Shew_0312 ABC transporter-related protein; ABC transporter-like protein 5086397 5613065 Ssed_4140 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001475872.1 5084217 D 425104 CDS YP_001475873.1 157377273 5613066 5086390..5087772 1 NC_009831.1 KEGG: slo:Shew_0311 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 5087772 5613066 Ssed_4141 Shewanella sediminis HAW-EB3 HlyD family type I secretion membrane fusion protein YP_001475873.1 5086390 D 425104 CDS YP_001475874.1 157377274 5612946 5087802..5089220 1 NC_009831.1 KEGG: slo:Shew_0310 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 5089220 5612946 Ssed_4142 Shewanella sediminis HAW-EB3 TolC family type I secretion outer membrane protein YP_001475874.1 5087802 D 425104 CDS YP_001475875.1 157377275 5612947 5089220..5089825 1 NC_009831.1 KEGG: slo:Shew_0309 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 5089825 5612947 Ssed_4143 Shewanella sediminis HAW-EB3 OmpA/MotB domain-containing protein YP_001475875.1 5089220 D 425104 CDS YP_001475876.1 157377276 5612948 5089844..5090554 1 NC_009831.1 KEGG: slo:Shew_0308 hypothetical protein; hypothetical protein 5090554 5612948 Ssed_4144 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475876.1 5089844 D 425104 CDS YP_001475877.1 157377277 5612949 5090563..5092485 1 NC_009831.1 KEGG: slo:Shew_0307 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 5092485 5612949 Ssed_4145 Shewanella sediminis HAW-EB3 diguanylate cyclase/phosphodiesterase YP_001475877.1 5090563 D 425104 CDS YP_001475878.1 157377278 5609595 5094176..5096803 1 NC_009831.1 KEGG: slo:Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase 5096803 5609595 Ssed_4146 Shewanella sediminis HAW-EB3 GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001475878.1 5094176 D 425104 CDS YP_001475879.1 157377279 5612725 complement(5096880..5098892) 1 NC_009831.1 KEGG: slo:Shew_0305 ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep 5098892 5612725 Ssed_4147 Shewanella sediminis HAW-EB3 ATP-dependent DNA helicase Rep YP_001475879.1 5096880 R 425104 CDS YP_001475880.1 157377280 5612726 5099114..5099755 1 NC_009831.1 KEGG: shn:Shewana3_0373 transcriptional regulator, TetR family; TetR family transcriptional regulator 5099755 5612726 Ssed_4148 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001475880.1 5099114 D 425104 CDS YP_001475881.1 157377281 5612425 5099752..5100870 1 NC_009831.1 KEGG: shn:Shewana3_0372 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 5100870 5612425 Ssed_4149 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001475881.1 5099752 D 425104 CDS YP_001475882.1 157377282 5612426 5100883..5103966 1 NC_009831.1 KEGG: shn:Shewana3_0371 acriflavin resistance protein; acriflavin resistance protein 5103966 5612426 Ssed_4150 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001475882.1 5100883 D 425104 CDS YP_001475883.1 157377283 5612427 5104119..5104379 1 NC_009831.1 KEGG: slo:Shew_0304 protein of unknown function DUF526; hypothetical protein 5104379 5612427 Ssed_4151 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475883.1 5104119 D 425104 CDS YP_001475884.1 157377284 5612428 complement(5104445..5105284) 1 NC_009831.1 KEGG: mmr:Mmar10_2310 protein of unknown function DUF417; hypothetical protein 5105284 5612428 Ssed_4152 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475884.1 5104445 R 425104 CDS YP_001475885.1 157377285 5612570 5105490..5106842 1 NC_009831.1 KEGG: son:SO4334 inner membrane protein; hypothetical protein 5106842 5612570 Ssed_4153 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475885.1 5105490 D 425104 CDS YP_001475886.1 157377286 5612571 5107052..5107822 1 NC_009831.1 KEGG: shm:Shewmr7_3657 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 5107822 5612571 Ssed_4154 Shewanella sediminis HAW-EB3 PA-phosphatase-like phosphoesterase YP_001475886.1 5107052 D 425104 CDS YP_001475887.1 157377287 5612572 5107924..5108403 1 NC_009831.1 KEGG: slo:Shew_0301 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 5108403 5612572 Ssed_4155 Shewanella sediminis HAW-EB3 AsnC family transcriptional regulator YP_001475887.1 5107924 D 425104 CDS YP_001475888.1 157377288 5612573 5108743..5110101 1 NC_009831.1 KEGG: slo:Shew_0300 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter 5110101 5612573 Ssed_4156 Shewanella sediminis HAW-EB3 sodium:neurotransmitter symporter YP_001475888.1 5108743 D 425104 CDS YP_001475889.1 157377289 5612371 5110336..5112339 1 NC_009831.1 KEGG: sdn:Sden_0470 TonB-dependent copper receptor; TonB-dependent copper receptor 5112339 5612371 Ssed_4157 Shewanella sediminis HAW-EB3 TonB-dependent copper receptor YP_001475889.1 5110336 D 425104 CDS YP_001475890.1 157377290 5612372 complement(5112500..5113936) 1 NC_009831.1 KEGG: shn:Shewana3_0537 aspartate kinase; aspartate kinase 5113936 5612372 Ssed_4158 Shewanella sediminis HAW-EB3 aspartate kinase YP_001475890.1 5112500 R 425104 CDS YP_001475891.1 157377291 5612373 5114157..5114594 1 NC_009831.1 KEGG: tva:TVAG_470020 ankyrin repeat protein; ankyrin repeat-containing protein 5114594 5612373 Ssed_4159 Shewanella sediminis HAW-EB3 ankyrin repeat-containing protein YP_001475891.1 5114157 D 425104 CDS YP_001475892.1 157377292 5612374 complement(5114710..5115852) 1 NC_009831.1 KEGG: slo:Shew_0294 alanine--glyoxylate transaminase; serine--pyruvate transaminase 5115852 5612374 Ssed_4160 Shewanella sediminis HAW-EB3 serine--pyruvate transaminase YP_001475892.1 5114710 R 425104 CDS YP_001475893.1 157377293 5612414 complement(5116129..5117679) 1 NC_009831.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 5117679 5612414 Ssed_4161 Shewanella sediminis HAW-EB3 threonine dehydratase YP_001475893.1 5116129 R 425104 CDS YP_001475894.1 157377294 5612415 complement(5117681..5119531) 1 NC_009831.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 5119531 5612415 Ssed_4162 Shewanella sediminis HAW-EB3 dihydroxy-acid dehydratase YP_001475894.1 5117681 R 425104 CDS YP_001475895.1 157377295 5612416 complement(5119700..5120623) 1 NC_009831.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 5120623 5612416 Ssed_4163 Shewanella sediminis HAW-EB3 branched-chain amino acid aminotransferase YP_001475895.1 5119700 R 425104 CDS YP_001475896.1 157377296 5612417 complement(5120708..5120968) 1 NC_009831.1 KEGG: slo:Shew_0290 acetolactate synthase small subunit; acetolactate synthase small subunit 5120968 5612417 Ssed_4164 Shewanella sediminis HAW-EB3 acetolactate synthase small subunit YP_001475896.1 5120708 R 425104 CDS YP_001475897.1 157377297 5612346 complement(5121039..5122712) 1 NC_009831.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 5122712 5612346 Ssed_4165 Shewanella sediminis HAW-EB3 acetolactate synthase 2 catalytic subunit YP_001475897.1 5121039 R 425104 CDS YP_001475898.1 157377298 5612347 complement(5123306..5124787) 1 NC_009831.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 5124787 5612347 Ssed_4166 Shewanella sediminis HAW-EB3 ketol-acid reductoisomerase YP_001475898.1 5123306 R 425104 CDS YP_001475899.1 157377299 5612348 5125011..5125883 1 NC_009831.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 5125883 5612348 Ssed_4167 Shewanella sediminis HAW-EB3 DNA-binding transcriptional regulator IlvY YP_001475899.1 5125011 D 425104 CDS YP_001475900.1 157377300 5612349 5125970..5126797 1 NC_009831.1 KEGG: slo:Shew_0286 extracellular solute-binding protein, family 3; extracellular solute-binding protein 5126797 5612349 Ssed_4168 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001475900.1 5125970 D 425104 CDS YP_001475901.1 157377301 5612327 5126930..5127733 1 NC_009831.1 KEGG: slo:Shew_0285 diguanylate cyclase; diguanylate cyclase 5127733 5612327 Ssed_4169 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001475901.1 5126930 D 425104 CDS YP_001475902.1 157377302 5612328 complement(5127799..5128590) 1 NC_009831.1 KEGG: pha:PSHAa0645 serine acetyltransferase; Serine O-acetyltransferase 5128590 5612328 Ssed_4170 Shewanella sediminis HAW-EB3 Serine O-acetyltransferase YP_001475902.1 5127799 R 425104 CDS YP_001475903.1 157377303 5612329 5129187..5130710 1 NC_009831.1 KEGG: slo:Shew_0283 Mg chelatase, subunit ChlI; Mg chelatase subunit ChlI 5130710 5612329 Ssed_4171 Shewanella sediminis HAW-EB3 Mg chelatase subunit ChlI YP_001475903.1 5129187 D 425104 CDS YP_001475904.1 157377304 5612330 complement(5130753..5131799) 1 NC_009831.1 KEGG: shn:Shewana3_0349 periplasmic sugar-binding protein; periplasmic sugar-binding protein 5131799 5612330 Ssed_4172 Shewanella sediminis HAW-EB3 periplasmic sugar-binding protein YP_001475904.1 5130753 R 425104 CDS YP_001475905.1 157377305 5612291 5132049..5132957 1 NC_009831.1 KEGG: slo:Shew_0282 phospholipid/glycerol acyltransferase; acyltransferase 5132957 5612291 Ssed_4173 Shewanella sediminis HAW-EB3 acyltransferase YP_001475905.1 5132049 D 425104 CDS YP_001475906.1 157377306 5612292 5132962..5133882 1 NC_009831.1 KEGG: she:Shewmr4_3626 phospholipid/glycerol acyltransferase; acyltransferase 5133882 5612292 Ssed_4174 Shewanella sediminis HAW-EB3 acyltransferase YP_001475906.1 5132962 D 425104 CDS YP_001475907.1 157377307 5612293 5134347..5135072 1 NC_009831.1 KEGG: shm:Shewmr7_0316 transcriptional regulator, GntR family; GntR family transcriptional regulator 5135072 5612293 Ssed_4175 Shewanella sediminis HAW-EB3 GntR family transcriptional regulator YP_001475907.1 5134347 D 425104 CDS YP_001475908.1 157377308 5612294 complement(5135224..5136315) 1 NC_009831.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 5136315 5612294 Ssed_4176 Shewanella sediminis HAW-EB3 branched-chain amino acid aminotransferase YP_001475908.1 5135224 R 425104 CDS YP_001475909.1 157377309 5612323 complement(5136484..5137248) 1 NC_009831.1 KEGG: son:SO3627 transcriptional regulator, TetR family; TetR family transcriptional regulator 5137248 5612323 Ssed_4177 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001475909.1 5136484 R 425104 CDS YP_001475910.1 157377310 5612324 5137436..5138938 1 NC_009831.1 KEGG: son:SO3624 flavocytochrome c flavin subunit; flavocytochrome c flavin subunit 5138938 5612324 Ssed_4178 Shewanella sediminis HAW-EB3 flavocytochrome c flavin subunit YP_001475910.1 5137436 D 425104 CDS YP_001475911.1 157377311 5612325 5138949..5139311 1 NC_009831.1 KEGG: son:SO3623 tetraheme cytochrome c; tetraheme cytochrome c 5139311 5612325 Ssed_4179 Shewanella sediminis HAW-EB3 tetraheme cytochrome c YP_001475911.1 5138949 D 425104 CDS YP_001475912.1 157377312 5612326 5139404..5140144 1 NC_009831.1 KEGG: son:SO3622 hypothetical protein; hypothetical protein 5140144 5612326 Ssed_4180 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475912.1 5139404 D 425104 CDS YP_001475913.1 157377313 5612262 5140203..5140670 1 NC_009831.1 KEGG: son:SO3621 hypothetical protein; hypothetical protein 5140670 5612262 Ssed_4181 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475913.1 5140203 D 425104 CDS YP_001475914.1 157377314 5612263 5140736..5141863 1 NC_009831.1 KEGG: slo:Shew_0274 hypothetical protein; hypothetical protein 5141863 5612263 Ssed_4182 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475914.1 5140736 D 425104 CDS YP_001475915.1 157377315 5612264 complement(5142057..5142848) 1 NC_009831.1 KEGG: slo:Shew_0277 transcriptional regulator, TetR family; TetR family transcriptional regulator 5142848 5612264 Ssed_4183 Shewanella sediminis HAW-EB3 TetR family transcriptional regulator YP_001475915.1 5142057 R 425104 CDS YP_001475916.1 157377316 5612165 5143202..5144713 1 NC_009831.1 KEGG: slo:Shew_0276 flavocytochrome c; flavocytochrome c 5144713 5612165 Ssed_4184 Shewanella sediminis HAW-EB3 flavocytochrome c YP_001475916.1 5143202 D 425104 CDS YP_001475917.1 157377317 5612166 5144725..5145093 1 NC_009831.1 KEGG: slo:Shew_0275 tetraheme cytochrome c; tetraheme cytochrome c 5145093 5612166 Ssed_4185 Shewanella sediminis HAW-EB3 tetraheme cytochrome c YP_001475917.1 5144725 D 425104 CDS YP_001475918.1 157377318 5612167 5145143..5146276 1 NC_009831.1 KEGG: slo:Shew_0274 hypothetical protein; hypothetical protein 5146276 5612167 Ssed_4186 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475918.1 5145143 D 425104 CDS YP_001475919.1 157377319 5612168 5146487..5147560 1 NC_009831.1 KEGG: slo:Shew_0273 hypothetical protein; hypothetical protein 5147560 5612168 Ssed_4187 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475919.1 5146487 D 425104 CDS YP_001475920.1 157377320 5612157 5147769..5148512 1 NC_009831.1 KEGG: slo:Shew_0272 cupin 2, conserved barrel domain protein; cupin 5148512 5612157 Ssed_4188 Shewanella sediminis HAW-EB3 cupin YP_001475920.1 5147769 D 425104 CDS YP_001475921.1 157377321 5612158 5148945..5149571 1 NC_009831.1 KEGG: slo:Shew_0270 hypothetical protein; hypothetical protein 5149571 5612158 Ssed_4189 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475921.1 5148945 D 425104 CDS YP_001475922.1 157377322 5612159 complement(5149652..5151145) 1 NC_009831.1 KEGG: sbl:Sbal_4057 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 5151145 5612159 Ssed_4190 Shewanella sediminis HAW-EB3 Na+/H+ antiporter NhaC YP_001475922.1 5149652 R 425104 CDS YP_001475923.1 157377323 5612160 5151325..5151528 1 NC_009831.1 KEGG: slo:Shew_0267 protein of unknown function DUF904; hypothetical protein 5151528 5612160 Ssed_4191 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475923.1 5151325 D 425104 CDS YP_001475924.1 157377324 5612114 complement(5151555..5151767) 1 NC_009831.1 KEGG: shw:Sputw3181_3796 protein of unknown function DUF1107; hypothetical protein 5151767 5612114 Ssed_4192 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475924.1 5151555 R 425104 CDS YP_001475925.1 157377325 5612115 complement(5152460..5153071) 1 NC_009831.1 KEGG: slo:Shew_0265 DsbA oxidoreductase; DsbA oxidoreductase 5153071 5612115 Ssed_4193 Shewanella sediminis HAW-EB3 DsbA oxidoreductase YP_001475925.1 5152460 R 425104 CDS YP_001475926.1 157377326 5612116 complement(5153209..5154213) 1 NC_009831.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 5154213 5612116 Ssed_4194 Shewanella sediminis HAW-EB3 serine/threonine protein kinase YP_001475926.1 5153209 R 425104 CDS YP_001475927.1 157377327 5612117 complement(5154210..5154503) 1 NC_009831.1 KEGG: slo:Shew_0263 hypothetical protein; hypothetical protein 5154503 5612117 Ssed_4195 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475927.1 5154210 R 425104 CDS YP_001475928.1 157377328 5611942 complement(5154547..5154855) 1 NC_009831.1 KEGG: slo:Shew_0261 hypothetical protein; hypothetical protein 5154855 5611942 Ssed_4196 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475928.1 5154547 R 425104 CDS YP_001475929.1 157377329 5611943 complement(5154970..5155845) 1 NC_009831.1 KEGG: slo:Shew_0260 hypothetical protein; hypothetical protein 5155845 5611943 Ssed_4197 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475929.1 5154970 R 425104 CDS YP_001475930.1 157377330 5611944 5156174..5156533 1 NC_009831.1 KEGG: sbl:Sbal_4066 DsrE family protein; DsrE family protein 5156533 5611944 Ssed_4198 Shewanella sediminis HAW-EB3 DsrE family protein YP_001475930.1 5156174 D 425104 CDS YP_001475931.1 157377331 5611945 5156798..5157190 1 NC_009831.1 KEGG: slo:Shew_0259 hypothetical protein; hypothetical protein 5157190 5611945 Ssed_4199 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475931.1 5156798 D 425104 CDS YP_001475932.1 157377332 5611930 5157376..5158266 1 NC_009831.1 KEGG: slo:Shew_0258 hypothetical protein; hypothetical protein 5158266 5611930 Ssed_4200 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475932.1 5157376 D 425104 CDS YP_001475933.1 157377333 5611931 complement(5158296..5158901) 1 NC_009831.1 KEGG: ppr:PBPRB0492 hypothetical protein; hypothetical protein 5158901 5611931 Ssed_4201 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475933.1 5158296 R 425104 CDS YP_001475934.1 157377334 5611932 5159106..5160173 1 NC_009831.1 KEGG: ppr:PBPRB0491 hypothetical secretion protein; hypothetical protein 5160173 5611932 Ssed_4202 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475934.1 5159106 D 425104 CDS YP_001475935.1 157377335 5611933 5160177..5161703 1 NC_009831.1 KEGG: ppr:PBPRB0490 hypothetical protein; hypothetical protein 5161703 5611933 Ssed_4203 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475935.1 5160177 D 425104 CDS YP_001475936.1 157377336 5611881 5161997..5164063 1 NC_009831.1 KEGG: slo:Shew_0257 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 5164063 5611881 Ssed_4204 Shewanella sediminis HAW-EB3 peptidase S9 prolyl oligopeptidase YP_001475936.1 5161997 D 425104 CDS YP_001475937.1 157377337 5611882 5164209..5164775 1 NC_009831.1 KEGG: slo:Shew_0256 hypothetical protein; hypothetical protein 5164775 5611882 Ssed_4205 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475937.1 5164209 D 425104 CDS YP_001475938.1 157377338 5611883 complement(5164940..5166439) 1 NC_009831.1 KEGG: ecp:ECP_2702 hypothetical protein; hypothetical protein 5166439 5611883 Ssed_4206 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475938.1 5164940 R 425104 CDS YP_001475939.1 157377339 5611884 complement(5166932..5167522) 1 NC_009831.1 KEGG: slo:Shew_0246 hypothetical protein; hypothetical protein 5167522 5611884 Ssed_4207 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475939.1 5166932 R 425104 CDS YP_001475940.1 157377340 5611914 complement(5167982..5171020) 1 NC_009831.1 KEGG: slo:Shew_0245 molydopterin dinucleotide-binding region; molydopterin dinucleotide-binding region 5171020 5611914 Ssed_4208 Shewanella sediminis HAW-EB3 molydopterin dinucleotide-binding region YP_001475940.1 5167982 R 425104 CDS YP_001475941.1 157377341 5611915 complement(5171030..5171725) 1 NC_009831.1 KEGG: slo:Shew_0244 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5171725 5611915 Ssed_4209 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475941.1 5171030 R 425104 CDS YP_001475942.1 157377342 5611916 5172261..5173268 1 NC_009831.1 KEGG: slo:Shew_0243 transcriptional regulator, LysR family; LysR family transcriptional regulator 5173268 5611916 Ssed_4210 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475942.1 5172261 D 425104 CDS YP_001475943.1 157377343 5611917 5173529..5175745 1 NC_009831.1 KEGG: slo:Shew_0242 molydopterin dinucleotide-binding region; molydopterin dinucleotide-binding region 5175745 5611917 Ssed_4211 Shewanella sediminis HAW-EB3 molydopterin dinucleotide-binding region YP_001475943.1 5173529 D 425104 CDS YP_001475944.1 157377344 5611859 5175756..5176301 1 NC_009831.1 KEGG: slo:Shew_0241 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5176301 5611859 Ssed_4212 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001475944.1 5175756 D 425104 CDS YP_001475945.1 157377345 5611860 5176301..5176888 1 NC_009831.1 KEGG: slo:Shew_0240 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 5176888 5611860 Ssed_4213 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001475945.1 5176301 D 425104 CDS YP_001475946.1 157377346 5611861 5177032..5177997 1 NC_009831.1 KEGG: slo:Shew_0239 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 5177997 5611861 Ssed_4214 Shewanella sediminis HAW-EB3 formate dehydrogenase subunit gamma YP_001475946.1 5177032 D 425104 CDS YP_001475947.1 157377347 5611862 5178164..5179222 1 NC_009831.1 KEGG: slo:Shew_0238 porin, gram-negative type; porin 5179222 5611862 Ssed_4215 Shewanella sediminis HAW-EB3 porin YP_001475947.1 5178164 D 425104 CDS YP_001475948.1 157377348 5611789 5179280..5181223 1 NC_009831.1 KEGG: slo:Shew_0237 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5181223 5611789 Ssed_4216 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001475948.1 5179280 D 425104 CDS YP_001475949.1 157377349 5611790 complement(5181357..5181701) 1 NC_009831.1 KEGG: slo:Shew_0234 protein of unknown function DUF1232; hypothetical protein 5181701 5611790 Ssed_4217 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475949.1 5181357 R 425104 CDS YP_001475950.1 157377350 5611791 complement(5181775..5184099) 1 NC_009831.1 KEGG: slo:Shew_0233 radical SAM N-terminal domain protein; hypothetical protein 5184099 5611791 Ssed_4218 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475950.1 5181775 R 425104 CDS YP_001475951.1 157377351 5611497 complement(5184312..5184713) 1 NC_009831.1 KEGG: slo:Shew_0232 hypothetical protein; hypothetical protein 5184713 5611497 Ssed_4219 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475951.1 5184312 R 425104 CDS YP_001475952.1 157377352 5611498 5185226..5186446 1 NC_009831.1 KEGG: slo:Shew_0231 protein of unknown function DUF1212; hypothetical protein 5186446 5611498 Ssed_4220 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475952.1 5185226 D 425104 CDS YP_001475953.1 157377353 5611499 5186743..5188296 1 NC_009831.1 KEGG: slo:Shew_0230 hypothetical protein; hypothetical protein 5188296 5611499 Ssed_4221 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475953.1 5186743 D 425104 CDS YP_001475954.1 157377354 5611500 5188354..5189157 1 NC_009831.1 KEGG: slo:Shew_0229 extracellular solute-binding protein, family 3; extracellular solute-binding protein 5189157 5611500 Ssed_4222 Shewanella sediminis HAW-EB3 extracellular solute-binding protein YP_001475954.1 5188354 D 425104 CDS YP_001475955.1 157377355 5611634 5189255..5189968 1 NC_009831.1 KEGG: ilo:IL1531 short chain dehydrogenase/reductase family protein; short chain dehydrogenase/reductase family protein 5189968 5611634 Ssed_4223 Shewanella sediminis HAW-EB3 short chain dehydrogenase/reductase family protein YP_001475955.1 5189255 D 425104 CDS YP_001475956.1 157377356 5611635 complement(5189849..5190250) 1 NC_009831.1 KEGG: aha:AHA_4062 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; hypothetical protein 5190250 5611635 Ssed_4224 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475956.1 5189849 R 425104 CDS YP_001475957.1 157377357 5611636 complement(5190527..5190853) 1 NC_009831.1 KEGG: sfr:Sfri_3425 small multidrug resistance protein; small multidrug resistance protein 5190853 5611636 Ssed_4225 Shewanella sediminis HAW-EB3 small multidrug resistance protein YP_001475957.1 5190527 R 425104 CDS YP_001475958.1 157377358 5611637 complement(5191179..5192018) 1 NC_009831.1 KEGG: sfr:Sfri_3426 carboxylesterase; carboxylesterase 5192018 5611637 Ssed_4226 Shewanella sediminis HAW-EB3 carboxylesterase YP_001475958.1 5191179 R 425104 CDS YP_001475959.1 157377359 5611436 complement(5192113..5193243) 1 NC_009831.1 KEGG: sfr:Sfri_3427 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 5193243 5611436 Ssed_4227 Shewanella sediminis HAW-EB3 alcohol dehydrogenase YP_001475959.1 5192113 R 425104 CDS YP_001475960.1 157377360 5611437 complement(5193482..5193739) 1 NC_009831.1 KEGG: sfr:Sfri_3428 transcriptional regulators, TraR/DksA family protein; hypothetical protein 5193739 5611437 Ssed_4228 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475960.1 5193482 R 425104 CDS YP_001475961.1 157377361 5611438 complement(5193962..5194330) 1 NC_009831.1 KEGG: hch:HCH_01698 predicted membrane protein; membrane protein 5194330 5611438 Ssed_4229 Shewanella sediminis HAW-EB3 membrane protein YP_001475961.1 5193962 R 425104 CDS YP_001475962.1 157377362 5611439 complement(5194773..5195270) 1 NC_009831.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 5195270 5611439 Ssed_4230 Shewanella sediminis HAW-EB3 glutathione-dependent formaldehyde-activating protein YP_001475962.1 5194773 R 425104 CDS YP_001475963.1 157377363 5613407 complement(5195410..5196561) 1 NC_009831.1 KEGG: son:SO_A0164 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 5196561 5613407 Ssed_4231 Shewanella sediminis HAW-EB3 iron-containing alcohol dehydrogenase YP_001475963.1 5195410 R 425104 CDS YP_001475964.1 157377364 5613408 5196891..5197760 1 NC_009831.1 KEGG: sfr:Sfri_3440 transcriptional regulator, LysR family protein; carbonate dehydratase 5197760 5613408 Ssed_4232 Shewanella sediminis HAW-EB3 carbonate dehydratase YP_001475964.1 5196891 D 425104 CDS YP_001475965.1 157377365 5613409 complement(5197787..5198047) 1 NC_009831.1 hypothetical protein 5198047 5613409 Ssed_4233 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475965.1 5197787 R 425104 CDS YP_001475966.1 157377366 5613410 5198442..5199650 1 NC_009831.1 KEGG: vfi:VF2364 NADH dehydrogenase; NADH dehydrogenase 5199650 5613410 Ssed_4234 Shewanella sediminis HAW-EB3 NADH dehydrogenase YP_001475966.1 5198442 D 425104 CDS YP_001475967.1 157377367 5614026 5200199..5201203 1 NC_009831.1 KEGG: ppr:PBPRB1790 hypothetical ABC transporter, substrate binding protein; ABC transporter substrate-binding protein 5201203 5614026 Ssed_4235 Shewanella sediminis HAW-EB3 ABC transporter substrate-binding protein YP_001475967.1 5200199 D 425104 CDS YP_001475968.1 157377368 5614027 5201290..5202189 1 NC_009831.1 KEGG: ppr:PBPRB1789 permease; permease 5202189 5614027 Ssed_4236 Shewanella sediminis HAW-EB3 permease YP_001475968.1 5201290 D 425104 CDS YP_001475969.1 157377369 5614028 5202182..5203441 1 NC_009831.1 KEGG: ppr:PBPRB1788 glycine betaine ABC transporter ATP-binding protein; glycine betaine ABC transporter ATP-binding protein 5203441 5614028 Ssed_4237 Shewanella sediminis HAW-EB3 glycine betaine ABC transporter ATP-binding protein YP_001475969.1 5202182 D 425104 CDS YP_001475970.1 157377370 5614029 5203441..5204655 1 NC_009831.1 KEGG: slo:Shew_3355 hypothetical protein; hypothetical protein 5204655 5614029 Ssed_4238 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475970.1 5203441 D 425104 CDS YP_001475971.1 157377371 5611164 5205184..5206191 1 NC_009831.1 KEGG: vfi:VF2039 hypothetical protein; hypothetical protein 5206191 5611164 Ssed_4239 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475971.1 5205184 D 425104 CDS YP_001475972.1 157377372 5611165 5206472..5207050 1 NC_009831.1 hypothetical protein 5207050 5611165 Ssed_4240 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475972.1 5206472 D 425104 CDS YP_001475973.1 157377373 5611166 complement(5207332..5210055) 1 NC_009831.1 KEGG: pat:Patl_0732 UvrD/REP helicase; UvrD/REP helicase 5210055 5611166 Ssed_4241 Shewanella sediminis HAW-EB3 UvrD/REP helicase YP_001475973.1 5207332 R 425104 CDS YP_001475974.1 157377374 5611167 5210636..5211499 1 NC_009831.1 KEGG: pat:Patl_0731 hypothetical protein; hypothetical protein 5211499 5611167 Ssed_4242 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475974.1 5210636 D 425104 CDS YP_001475975.1 157377375 5611275 5211806..5212735 1 NC_009831.1 KEGG: pat:Patl_0730 phage integrase; phage integrase 5212735 5611275 Ssed_4243 Shewanella sediminis HAW-EB3 phage integrase YP_001475975.1 5211806 D 425104 CDS YP_001475976.1 157377376 5611276 5212728..5214788 1 NC_009831.1 KEGG: pat:Patl_0729 AAA ATPase, central region; ATPase AAA 5214788 5611276 Ssed_4244 Shewanella sediminis HAW-EB3 ATPase AAA YP_001475976.1 5212728 D 425104 CDS YP_001475977.1 157377377 5611277 5214894..5215346 1 NC_009831.1 KEGG: she:Shewmr4_3220 hypothetical protein; hypothetical protein 5215346 5611277 Ssed_4245 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475977.1 5214894 D 425104 CDS YP_001475978.1 157377378 5611278 5215460..5215888 1 NC_009831.1 KEGG: she:Shewmr4_3221 hypothetical protein; hypothetical protein 5215888 5611278 Ssed_4246 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475978.1 5215460 D 425104 CDS YP_001475979.1 157377379 5613604 5216039..5217568 1 NC_009831.1 KEGG: sfu:Sfum_2532 hypothetical protein; hypothetical protein 5217568 5613604 Ssed_4247 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475979.1 5216039 D 425104 CDS YP_001475980.1 157377380 5613605 complement(5217924..5218922) 1 NC_009831.1 KEGG: sfu:Sfum_2533 type II site-specific deoxyribonuclease; hypothetical protein 5218922 5613605 Ssed_4248 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475980.1 5217924 R 425104 CDS YP_001475981.1 157377381 5613606 complement(5219352..5221115) 1 NC_009831.1 KEGG: pat:Patl_0725 phage integrase; phage integrase 5221115 5613606 Ssed_4249 Shewanella sediminis HAW-EB3 phage integrase YP_001475981.1 5219352 R 425104 CDS YP_001475982.1 157377382 5609596 complement(5221678..5222520) 1 NC_009831.1 KEGG: slo:Shew_0228 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase 5222520 5609596 Ssed_4250 Shewanella sediminis HAW-EB3 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001475982.1 5221678 R 425104 CDS YP_001475983.1 157377383 5610117 5222608..5224488 1 NC_009831.1 KEGG: slo:Shew_0227 LppC family lipoprotein; LppC family lipoprotein 5224488 5610117 Ssed_4251 Shewanella sediminis HAW-EB3 LppC family lipoprotein YP_001475983.1 5222608 D 425104 CDS YP_001475984.1 157377384 5610118 5224485..5224838 1 NC_009831.1 KEGG: slo:Shew_0226 protein of unknown function UPF0102; hypothetical protein 5224838 5610118 Ssed_4252 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475984.1 5224485 D 425104 CDS YP_001475985.1 157377385 5610119 5224911..5225504 1 NC_009831.1 KEGG: spc:Sputcn32_3694 phosphoheptose isomerase; phosphoheptose isomerase 5225504 5610119 Ssed_4253 Shewanella sediminis HAW-EB3 phosphoheptose isomerase YP_001475985.1 5224911 D 425104 CDS YP_001475986.1 157377386 5609643 5225593..5226162 1 NC_009831.1 KEGG: slo:Shew_0224 transport-associated; transport-associated 5226162 5609643 Ssed_4254 Shewanella sediminis HAW-EB3 transport-associated YP_001475986.1 5225593 D 425104 CDS YP_001475987.1 157377387 5609644 complement(5226202..5227089) 1 NC_009831.1 KEGG: sfr:Sfri_0385 protein of unknown function DUF6, transmembrane; hypothetical protein 5227089 5609644 Ssed_4255 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475987.1 5226202 R 425104 CDS YP_001475988.1 157377388 5609645 5227218..5228093 1 NC_009831.1 KEGG: sbl:Sbal_4104 transcriptional regulator, LysR family; LysR family transcriptional regulator 5228093 5609645 Ssed_4256 Shewanella sediminis HAW-EB3 LysR family transcriptional regulator YP_001475988.1 5227218 D 425104 CDS YP_001475989.1 157377389 5609646 complement(5228183..5229190) 1 NC_009831.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 5229190 5609646 Ssed_4257 Shewanella sediminis HAW-EB3 tryptophanyl-tRNA synthetase YP_001475989.1 5228183 R 425104 CDS YP_001475990.1 157377390 5611587 complement(5229187..5229894) 1 NC_009831.1 KEGG: shw:Sputw3181_3841 phosphoglycolate phosphatase; phosphoglycolate phosphatase 5229894 5611587 Ssed_4258 Shewanella sediminis HAW-EB3 phosphoglycolate phosphatase YP_001475990.1 5229187 R 425104 CDS YP_001475991.1 157377391 5611588 complement(5229898..5230572) 1 NC_009831.1 KEGG: son:SO0292 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 5230572 5611588 Ssed_4259 Shewanella sediminis HAW-EB3 ribulose-phosphate 3-epimerase YP_001475991.1 5229898 R 425104 CDS YP_001475992.1 157377392 5611589 5230781..5231140 1 NC_009831.1 KEGG: slo:Shew_0218 hypothetical protein; hypothetical protein 5231140 5611589 Ssed_4260 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475992.1 5230781 D 425104 CDS YP_001475993.1 157377393 5611590 5231176..5231337 1 NC_009831.1 KEGG: slo:Shew_0217 hypothetical protein; hypothetical protein 5231337 5611590 Ssed_4261 Shewanella sediminis HAW-EB3 hypothetical protein YP_001475993.1 5231176 D 425104 CDS YP_001475994.1 157377394 5611708 complement(5231391..5232230) 1 NC_009831.1 KEGG: slo:Shew_0216 DNA adenine methylase; site-specific DNA-methyltransferase (adenine-specific) 5232230 5611708 Ssed_4262 Shewanella sediminis HAW-EB3 site-specific DNA-methyltransferase (adenine-specific) YP_001475994.1 5231391 R 425104 CDS YP_001475995.1 157377395 5611709 complement(5232280..5233731) 1 NC_009831.1 KEGG: slo:Shew_0215 sporulation domain protein; sporulation domain-containing protein 5233731 5611709 Ssed_4263 Shewanella sediminis HAW-EB3 sporulation domain-containing protein YP_001475995.1 5232280 R 425104 CDS YP_001475996.1 157377396 5611710 complement(5233749..5234825) 1 NC_009831.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 5234825 aroB 5611710 aroB Shewanella sediminis HAW-EB3 3-dehydroquinate synthase YP_001475996.1 5233749 R 425104 CDS YP_001475997.1 157377397 5611711 complement(5234834..5235349) 1 NC_009831.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I 5235349 aroK 5611711 aroK Shewanella sediminis HAW-EB3 shikimate kinase I YP_001475997.1 5234834 R 425104 CDS YP_001475998.1 157377398 5611404 complement(5235570..5237618) 1 NC_009831.1 KEGG: slo:Shew_0212 type IV pilus secretin PilQ; type IV pilus secretin PilQ 5237618 5611404 Ssed_4266 Shewanella sediminis HAW-EB3 type IV pilus secretin PilQ YP_001475998.1 5235570 R 425104 CDS YP_001475999.1 157377399 5611405 complement(5237640..5238155) 1 NC_009831.1 KEGG: shn:Shewana3_3896 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5238155 5611405 Ssed_4267 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001475999.1 5237640 R 425104 CDS YP_001476000.1 157377400 5611406 complement(5238158..5238778) 1 NC_009831.1 KEGG: slo:Shew_0210 pilus assembly protein, PilO; pilus assembly protein, PilO 5238778 5611406 Ssed_4268 Shewanella sediminis HAW-EB3 pilus assembly protein, PilO YP_001476000.1 5238158 R 425104 CDS YP_001476001.1 157377401 5611407 complement(5238775..5239353) 1 NC_009831.1 KEGG: slo:Shew_0209 fimbrial assembly family protein; fimbrial assembly family protein 5239353 5611407 Ssed_4269 Shewanella sediminis HAW-EB3 fimbrial assembly family protein YP_001476001.1 5238775 R 425104 CDS YP_001476002.1 157377402 5611910 complement(5239341..5240420) 1 NC_009831.1 KEGG: slo:Shew_0208 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 5240420 5611910 Ssed_4270 Shewanella sediminis HAW-EB3 type IV pilus assembly protein PilM YP_001476002.1 5239341 R 425104 CDS YP_001476003.1 157377403 5611911 5240608..5243139 1 NC_009831.1 KEGG: slo:Shew_0207 penicillin-binding protein, 1A family; peptidoglycan glycosyltransferase 5243139 5611911 Ssed_4271 Shewanella sediminis HAW-EB3 peptidoglycan glycosyltransferase YP_001476003.1 5240608 D 425104 CDS YP_001476004.1 157377404 5611912 complement(5243279..5244652) 1 NC_009831.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 5244652 5611912 Ssed_4272 Shewanella sediminis HAW-EB3 argininosuccinate lyase YP_001476004.1 5243279 R 425104 CDS YP_001476005.1 157377405 5611913 complement(5244766..5245989) 1 NC_009831.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 5245989 5611913 Ssed_4273 Shewanella sediminis HAW-EB3 argininosuccinate synthase YP_001476005.1 5244766 R 425104 CDS YP_001476006.1 157377406 5611965 complement(5246048..5246956) 1 NC_009831.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 5246956 5611965 Ssed_4274 Shewanella sediminis HAW-EB3 ornithine carbamoyltransferase YP_001476006.1 5246048 R 425104 CDS YP_001476007.1 157377407 5611966 complement(5247073..5247864) 1 NC_009831.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 5247864 5611966 Ssed_4275 Shewanella sediminis HAW-EB3 acetylglutamate kinase YP_001476007.1 5247073 R 425104 CDS YP_001476008.1 157377408 5611967 complement(5247887..5248867) 1 NC_009831.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 5248867 argC 5611967 argC Shewanella sediminis HAW-EB3 N-acetyl-gamma-glutamyl-phosphate reductase YP_001476008.1 5247887 R 425104 CDS YP_001476009.1 157377409 5611968 5249133..5250284 1 NC_009831.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 5250284 5611968 Ssed_4277 Shewanella sediminis HAW-EB3 acetylornithine deacetylase YP_001476009.1 5249133 D 425104 CDS YP_001476010.1 157377410 5612015 5250464..5253100 1 NC_009831.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 5253100 5612015 Ssed_4278 Shewanella sediminis HAW-EB3 phosphoenolpyruvate carboxylase YP_001476010.1 5250464 D 425104 CDS YP_001476011.1 157377411 5612016 5253100..5253639 1 NC_009831.1 KEGG: slo:Shew_0199 protein of unknown function DUF1439; hypothetical protein 5253639 5612016 Ssed_4279 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476011.1 5253100 D 425104 CDS YP_001476012.1 157377412 5612017 complement(5253716..5254990) 1 NC_009831.1 KEGG: shw:Sputw3181_3863 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA 5254990 5612017 Ssed_4280 Shewanella sediminis HAW-EB3 competence/damage-inducible protein CinA YP_001476012.1 5253716 R 425104 CDS YP_001476013.1 157377413 5609757 complement(5261231..5261809) 1 NC_009831.1 KEGG: slo:Shew_0196 redoxin domain protein; redoxin domain-containing protein 5261809 5609757 Ssed_4281 Shewanella sediminis HAW-EB3 redoxin domain-containing protein YP_001476013.1 5261231 R 425104 CDS YP_001476014.1 157377414 5612035 complement(5261806..5262288) 1 NC_009831.1 KEGG: slo:Shew_0195 cytochrome c biogenesis protein; cytochrome c biogenesis protein 5262288 5612035 Ssed_4282 Shewanella sediminis HAW-EB3 cytochrome c biogenesis protein YP_001476014.1 5261806 R 425104 CDS YP_001476015.1 157377415 5612036 complement(5262285..5262842) 1 NC_009831.1 KEGG: slo:Shew_0194 periplasmic protein thiol--disulphide oxidoreductase DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE 5262842 5612036 Ssed_4283 Shewanella sediminis HAW-EB3 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001476015.1 5262285 R 425104 CDS YP_001476016.1 157377416 5612037 complement(5262860..5264839) 1 NC_009831.1 KEGG: slo:Shew_0193 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 5264839 5612037 Ssed_4284 Shewanella sediminis HAW-EB3 cytochrome c-type biogenesis protein CcmF YP_001476016.1 5262860 R 425104 CDS YP_001476017.1 157377417 5612038 5265249..5266496 1 NC_009831.1 KEGG: slo:Shew_0192 TPR repeat-containing protein; hypothetical protein 5266496 5612038 Ssed_4285 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476017.1 5265249 D 425104 CDS YP_001476018.1 157377418 5613351 complement(5266622..5266915) 1 NC_009831.1 KEGG: slo:Shew_0191 cytochrome c, class I; cytochrome c, class I 5266915 5613351 Ssed_4286 Shewanella sediminis HAW-EB3 cytochrome c, class I YP_001476018.1 5266622 R 425104 CDS YP_001476019.1 157377419 5613352 5267262..5267912 1 NC_009831.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 5267912 5613352 Ssed_4287 Shewanella sediminis HAW-EB3 cytochrome c biogenesis protein CcmA YP_001476019.1 5267262 D 425104 CDS YP_001476020.1 157377420 5613353 5267922..5268608 1 NC_009831.1 KEGG: slo:Shew_0189 heme exporter protein CcmB; heme exporter protein CcmB 5268608 5613353 Ssed_4288 Shewanella sediminis HAW-EB3 heme exporter protein CcmB YP_001476020.1 5267922 D 425104 CDS YP_001476021.1 157377421 5613508 5268610..5269356 1 NC_009831.1 KEGG: slo:Shew_0188 heme exporter protein CcmC; heme exporter protein CcmC 5269356 5613508 Ssed_4289 Shewanella sediminis HAW-EB3 heme exporter protein CcmC YP_001476021.1 5268610 D 425104 CDS YP_001476022.1 157377422 5613509 5269356..5269553 1 NC_009831.1 KEGG: shw:Sputw3181_0185 heme exporter protein D (CcmD); heme exporter protein D (CcmD) 5269553 5613509 Ssed_4290 Shewanella sediminis HAW-EB3 heme exporter protein D (CcmD) YP_001476022.1 5269356 D 425104 CDS YP_001476023.1 157377423 5613510 5269553..5270038 1 NC_009831.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 5270038 5613510 Ssed_4291 Shewanella sediminis HAW-EB3 cytochrome c-type biogenesis protein CcmE YP_001476023.1 5269553 D 425104 CDS YP_001476024.1 157377424 5613511 5270108..5271148 1 NC_009831.1 KEGG: slo:Shew_0185 hypothetical protein; hypothetical protein 5271148 5613511 Ssed_4292 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476024.1 5270108 D 425104 CDS YP_001476025.1 157377425 5613993 complement(5271234..5271632) 1 NC_009831.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 5271632 rplQ 5613993 rplQ Shewanella sediminis HAW-EB3 50S ribosomal protein L17 YP_001476025.1 5271234 R 425104 CDS YP_001476026.1 157377426 5613994 complement(5271672..5272661) 1 NC_009831.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 5272661 5613994 Ssed_4294 Shewanella sediminis HAW-EB3 DNA-directed RNA polymerase subunit alpha YP_001476026.1 5271672 R 425104 CDS YP_001476027.1 157377427 5613995 complement(5272686..5273306) 1 NC_009831.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 5273306 rpsD 5613995 rpsD Shewanella sediminis HAW-EB3 30S ribosomal protein S4 YP_001476027.1 5272686 R 425104 CDS YP_001476028.1 157377428 5613996 complement(5273342..5273734) 1 NC_009831.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 5273734 5613996 Ssed_4296 Shewanella sediminis HAW-EB3 30S ribosomal protein S11 YP_001476028.1 5273342 R 425104 CDS YP_001476029.1 157377429 5612772 complement(5273749..5274105) 1 NC_009831.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 5274105 rpsM 5612772 rpsM Shewanella sediminis HAW-EB3 30S ribosomal protein S13 YP_001476029.1 5273749 R 425104 CDS YP_001476030.1 157377430 5612773 complement(5274357..5275697) 1 NC_009831.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 5275697 secY 5612773 secY Shewanella sediminis HAW-EB3 preprotein translocase subunit SecY YP_001476030.1 5274357 R 425104 CDS YP_001476031.1 157377431 5612774 complement(5275705..5276139) 1 NC_009831.1 late assembly protein; 50S ribosomal protein L15 5276139 rplO 5612774 rplO Shewanella sediminis HAW-EB3 50S ribosomal protein L15 YP_001476031.1 5275705 R 425104 CDS YP_001476032.1 157377432 5612775 complement(5276333..5276836) 1 NC_009831.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 5276836 rpsE 5612775 rpsE Shewanella sediminis HAW-EB3 30S ribosomal protein S5 YP_001476032.1 5276333 R 425104 CDS YP_001476033.1 157377433 5611504 complement(5276850..5277200) 1 NC_009831.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 5277200 rplR 5611504 rplR Shewanella sediminis HAW-EB3 50S ribosomal protein L18 YP_001476033.1 5276850 R 425104 CDS YP_001476034.1 157377434 5611505 complement(5277211..5277741) 1 NC_009831.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 5277741 rplF 5611505 rplF Shewanella sediminis HAW-EB3 50S ribosomal protein L6 YP_001476034.1 5277211 R 425104 CDS YP_001476035.1 157377435 5611506 complement(5277752..5278144) 1 NC_009831.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 5278144 rpsH 5611506 rpsH Shewanella sediminis HAW-EB3 30S ribosomal protein S8 YP_001476035.1 5277752 R 425104 CDS YP_001476036.1 157377436 5611507 complement(5278169..5278474) 1 NC_009831.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 5278474 rpsN 5611507 rpsN Shewanella sediminis HAW-EB3 30S ribosomal protein S14 YP_001476036.1 5278169 R 425104 CDS YP_001476037.1 157377437 5613332 complement(5278485..5279024) 1 NC_009831.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 5279024 rplE 5613332 rplE Shewanella sediminis HAW-EB3 50S ribosomal protein L5 YP_001476037.1 5278485 R 425104 CDS YP_001476038.1 157377438 5613333 complement(5279037..5279351) 1 NC_009831.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 5279351 rplX 5613333 rplX Shewanella sediminis HAW-EB3 50S ribosomal protein L24 YP_001476038.1 5279037 R 425104 CDS YP_001476039.1 157377439 5613334 complement(5279362..5279730) 1 NC_009831.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 5279730 rplN 5613334 rplN Shewanella sediminis HAW-EB3 50S ribosomal protein L14 YP_001476039.1 5279362 R 425104 CDS YP_001476040.1 157377440 5613335 complement(5279907..5280155) 1 NC_009831.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 5280155 rpsQ 5613335 rpsQ Shewanella sediminis HAW-EB3 30S ribosomal protein S17 YP_001476040.1 5279907 R 425104 CDS YP_001476041.1 157377441 5613485 complement(5280155..5280346) 1 NC_009831.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 5280346 5613485 Ssed_4309 Shewanella sediminis HAW-EB3 50S ribosomal protein L29 YP_001476041.1 5280155 R 425104 CDS YP_001476042.1 157377442 5613486 complement(5280346..5280756) 1 NC_009831.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 5280756 rplP 5613486 rplP Shewanella sediminis HAW-EB3 50S ribosomal protein L16 YP_001476042.1 5280346 R 425104 CDS YP_001476043.1 157377443 5613487 complement(5280768..5281457) 1 NC_009831.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 5281457 rpsC 5613487 rpsC Shewanella sediminis HAW-EB3 30S ribosomal protein S3 YP_001476043.1 5280768 R 425104 CDS YP_001476044.1 157377444 5613488 complement(5281467..5281799) 1 NC_009831.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 5281799 rplV 5613488 rplV Shewanella sediminis HAW-EB3 50S ribosomal protein L22 YP_001476044.1 5281467 R 425104 CDS YP_001476045.1 157377445 5609840 complement(5281815..5282093) 1 NC_009831.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 5282093 rpsS 5609840 rpsS Shewanella sediminis HAW-EB3 30S ribosomal protein S19 YP_001476045.1 5281815 R 425104 CDS YP_001476046.1 157377446 5609841 complement(5282105..5282932) 1 NC_009831.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 5282932 rplB 5609841 rplB Shewanella sediminis HAW-EB3 50S ribosomal protein L2 YP_001476046.1 5282105 R 425104 CDS YP_001476047.1 157377447 5609842 complement(5282949..5283248) 1 NC_009831.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 5283248 rplW 5609842 rplW Shewanella sediminis HAW-EB3 50S ribosomal protein L23 YP_001476047.1 5282949 R 425104 CDS YP_001476048.1 157377448 5609843 complement(5283245..5283850) 1 NC_009831.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 5283850 rplD 5609843 rplD Shewanella sediminis HAW-EB3 50S ribosomal protein L4 YP_001476048.1 5283245 R 425104 CDS YP_001476049.1 157377449 5613806 complement(5283867..5284505) 1 NC_009831.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 5284505 rplC 5613806 rplC Shewanella sediminis HAW-EB3 50S ribosomal protein L3 YP_001476049.1 5283867 R 425104 CDS YP_001476050.1 157377450 5613807 complement(5284521..5284832) 1 NC_009831.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 5284832 rpsJ 5613807 rpsJ Shewanella sediminis HAW-EB3 30S ribosomal protein S10 YP_001476050.1 5284521 R 425104 CDS YP_001476051.1 157377451 5613808 complement(5285206..5286390) 1 NC_009831.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 5286390 5613808 Ssed_4319 Shewanella sediminis HAW-EB3 elongation factor Tu YP_001476051.1 5285206 R 425104 CDS YP_001476052.1 157377452 5613809 complement(5286473..5288569) 1 NC_009831.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 5288569 5613809 Ssed_4320 Shewanella sediminis HAW-EB3 elongation factor G YP_001476052.1 5286473 R 425104 CDS YP_001476053.1 157377453 5614127 complement(5288645..5289115) 1 NC_009831.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 5289115 5614127 Ssed_4321 Shewanella sediminis HAW-EB3 30S ribosomal protein S7 YP_001476053.1 5288645 R 425104 CDS YP_001476054.1 157377454 5614128 complement(5289196..5289570) 1 NC_009831.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 5289570 rpsL 5614128 rpsL Shewanella sediminis HAW-EB3 30S ribosomal protein S12 YP_001476054.1 5289196 R 425104 CDS YP_001476055.1 157377455 5614129 complement(5289761..5293978) 1 NC_009831.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 5293978 5614129 Ssed_4323 Shewanella sediminis HAW-EB3 DNA-directed RNA polymerase subunit beta' YP_001476055.1 5289761 R 425104 CDS YP_001476056.1 157377456 5609806 complement(5294059..5298090) 1 NC_009831.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 5298090 rpoB 5609806 rpoB Shewanella sediminis HAW-EB3 DNA-directed RNA polymerase subunit beta YP_001476056.1 5294059 R 425104 CDS YP_001476057.1 157377457 5609807 complement(5298329..5298697) 1 NC_009831.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 5298697 rplL 5609807 rplL Shewanella sediminis HAW-EB3 50S ribosomal protein L7/L12 YP_001476057.1 5298329 R 425104 CDS YP_001476058.1 157377458 5609808 complement(5298744..5299244) 1 NC_009831.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 5299244 rplJ 5609808 rplJ Shewanella sediminis HAW-EB3 50S ribosomal protein L10 YP_001476058.1 5298744 R 425104 CDS YP_001476059.1 157377459 5609809 complement(5299509..5300210) 1 NC_009831.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 5300210 rplA 5609809 rplA Shewanella sediminis HAW-EB3 50S ribosomal protein L1 YP_001476059.1 5299509 R 425104 CDS YP_001476060.1 157377460 5610387 complement(5300215..5300643) 1 NC_009831.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 5300643 rplK 5610387 rplK Shewanella sediminis HAW-EB3 50S ribosomal protein L11 YP_001476060.1 5300215 R 425104 CDS YP_001476061.1 157377461 5610388 complement(5300768..5301319) 1 NC_009831.1 KEGG: sfr:Sfri_0136 NusG antitermination factor; NusG antitermination factor 5301319 5610388 Ssed_4329 Shewanella sediminis HAW-EB3 NusG antitermination factor YP_001476061.1 5300768 R 425104 CDS YP_001476062.1 157377462 5610389 complement(5301329..5301700) 1 NC_009831.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 5301700 secE 5610389 secE Shewanella sediminis HAW-EB3 preprotein translocase subunit SecE YP_001476062.1 5301329 R 425104 CDS YP_001476063.1 157377463 5610897 5303845..5304795 1 NC_009831.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 5304795 5610897 Ssed_4333 Shewanella sediminis HAW-EB3 pantothenate kinase YP_001476063.1 5303845 D 425104 CDS YP_001476064.1 157377464 5610495 complement(5304812..5305774) 1 NC_009831.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 5305774 5610495 Ssed_4334 Shewanella sediminis HAW-EB3 biotin--protein ligase YP_001476064.1 5304812 R 425104 CDS YP_001476065.1 157377465 5610496 complement(5305767..5306801) 1 NC_009831.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 5306801 murB 5610496 murB Shewanella sediminis HAW-EB3 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001476065.1 5305767 R 425104 CDS YP_001476066.1 157377466 5610211 5313552..5314019 1 NC_009831.1 KEGG: slo:Shew_0140 RNP-1-like RNA-binding protein; RNP-1-like RNA-binding protein 5314019 5610211 Ssed_4336 Shewanella sediminis HAW-EB3 RNP-1-like RNA-binding protein YP_001476066.1 5313552 D 425104 CDS YP_001476067.1 157377467 5613664 complement(5314048..5314896) 1 NC_009831.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 5314896 5613664 Ssed_4337 Shewanella sediminis HAW-EB3 glutamate racemase YP_001476067.1 5314048 R 425104 CDS YP_001476068.1 157377468 5613665 5315003..5316100 1 NC_009831.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 5316100 5613665 Ssed_4338 Shewanella sediminis HAW-EB3 tRNA (uracil-5-)-methyltransferase YP_001476068.1 5315003 D 425104 CDS YP_001476069.1 157377469 5613666 complement(5316217..5316834) 1 NC_009831.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 5316834 5613666 Ssed_4339 Shewanella sediminis HAW-EB3 DNA-binding transcriptional repressor FabR YP_001476069.1 5316217 R 425104 CDS YP_001476070.1 157377470 5613667 5316987..5318105 1 NC_009831.1 KEGG: sbl:Sbal_4181 stearoyl-CoA 9-desaturase; stearoyl-CoA 9-desaturase 5318105 5613667 Ssed_4340 Shewanella sediminis HAW-EB3 stearoyl-CoA 9-desaturase YP_001476070.1 5316987 D 425104 CDS YP_001476071.1 157377471 5611720 5318306..5319346 1 NC_009831.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 5319346 5611720 Ssed_4341 Shewanella sediminis HAW-EB3 selenophosphate synthetase YP_001476071.1 5318306 D 425104 CDS YP_001476072.1 157377472 5611721 5319346..5320455 1 NC_009831.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 5320455 5611721 Ssed_4342 Shewanella sediminis HAW-EB3 tRNA 2-selenouridine synthase YP_001476072.1 5319346 D 425104 CDS YP_001476073.1 157377473 5611722 complement(5320517..5322286) 1 NC_009831.1 KEGG: slo:Shew_0133 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 5322286 5611722 Ssed_4343 Shewanella sediminis HAW-EB3 phospholipid/glycerol acyltransferase YP_001476073.1 5320517 R 425104 CDS YP_001476074.1 157377474 5611723 complement(5322318..5322764) 1 NC_009831.1 KEGG: shn:Shewana3_0171 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5322764 5611723 Ssed_4344 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001476074.1 5322318 R 425104 CDS YP_001476075.1 157377475 5613140 complement(5322757..5323569) 1 NC_009831.1 KEGG: slo:Shew_0130 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 5323569 5613140 Ssed_4345 Shewanella sediminis HAW-EB3 3'(2'),5'-bisphosphate nucleotidase YP_001476075.1 5322757 R 425104 CDS YP_001476076.1 157377476 5613141 complement(5323626..5324171) 1 NC_009831.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 5324171 nudE 5613141 nudE Shewanella sediminis HAW-EB3 ADP-ribose diphosphatase NudE YP_001476076.1 5323626 R 425104 CDS YP_001476077.1 157377477 5613142 5324260..5324925 1 NC_009831.1 KEGG: sbl:Sbal_4195 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 5324925 5613142 Ssed_4347 Shewanella sediminis HAW-EB3 HAD family hydrolase YP_001476077.1 5324260 D 425104 CDS YP_001476078.1 157377478 5613143 complement(5325196..5325954) 1 NC_009831.1 KEGG: slo:Shew_3609 type II secretion system protein N; type II secretion system protein N 5325954 5613143 Ssed_4348 Shewanella sediminis HAW-EB3 type II secretion system protein N YP_001476078.1 5325196 R 425104 CDS YP_001476079.1 157377479 5613186 complement(5326035..5326511) 1 NC_009831.1 KEGG: slo:Shew_3610 general secretion pathway M protein; general secretion pathway M protein 5326511 5613186 Ssed_4349 Shewanella sediminis HAW-EB3 general secretion pathway M protein YP_001476079.1 5326035 R 425104 CDS YP_001476080.1 157377480 5613187 complement(5326513..5327712) 1 NC_009831.1 KEGG: slo:Shew_3611 general secretion pathway protein L; general secretion pathway protein L 5327712 5613187 Ssed_4350 Shewanella sediminis HAW-EB3 general secretion pathway protein L YP_001476080.1 5326513 R 425104 CDS YP_001476081.1 157377481 5613188 complement(5327793..5328791) 1 NC_009831.1 KEGG: slo:Shew_3612 general secretion pathway protein K; general secretion pathway protein K 5328791 5613188 Ssed_4351 Shewanella sediminis HAW-EB3 general secretion pathway protein K YP_001476081.1 5327793 R 425104 CDS YP_001476082.1 157377482 5613189 complement(5328791..5329543) 1 NC_009831.1 KEGG: slo:Shew_3613 general secretion pathway protein J; general secretion pathway protein J 5329543 5613189 Ssed_4352 Shewanella sediminis HAW-EB3 general secretion pathway protein J YP_001476082.1 5328791 R 425104 CDS YP_001476083.1 157377483 5609798 complement(5329524..5329895) 1 NC_009831.1 KEGG: sbl:Sbal_4201 general secretion pathway protein I; general secretion pathway protein I 5329895 5609798 Ssed_4353 Shewanella sediminis HAW-EB3 general secretion pathway protein I YP_001476083.1 5329524 R 425104 CDS YP_001476084.1 157377484 5609799 complement(5329979..5330551) 1 NC_009831.1 KEGG: slo:Shew_3615 general secretion pathway protein H; general secretion pathway protein H 5330551 5609799 Ssed_4354 Shewanella sediminis HAW-EB3 general secretion pathway protein H YP_001476084.1 5329979 R 425104 CDS YP_001476085.1 157377485 5609800 complement(5330581..5331015) 1 NC_009831.1 KEGG: slo:Shew_3616 general secretion pathway protein G; general secretion pathway protein G 5331015 5609800 Ssed_4355 Shewanella sediminis HAW-EB3 general secretion pathway protein G YP_001476085.1 5330581 R 425104 CDS YP_001476086.1 157377486 5609801 complement(5331163..5332386) 1 NC_009831.1 KEGG: slo:Shew_3617 general secretion pathway protein F; general secretion pathway protein F 5332386 5609801 Ssed_4356 Shewanella sediminis HAW-EB3 general secretion pathway protein F YP_001476086.1 5331163 R 425104 CDS YP_001476087.1 157377487 5609715 complement(5332390..5333964) 1 NC_009831.1 KEGG: slo:Shew_3618 general secretory pathway protein E; general secretory pathway protein E 5333964 5609715 Ssed_4357 Shewanella sediminis HAW-EB3 general secretory pathway protein E YP_001476087.1 5332390 R 425104 CDS YP_001476088.1 157377488 5609716 complement(5333954..5336128) 1 NC_009831.1 KEGG: slo:Shew_3619 general secretion pathway protein D; general secretion pathway protein D 5336128 5609716 Ssed_4358 Shewanella sediminis HAW-EB3 general secretion pathway protein D YP_001476088.1 5333954 R 425104 CDS YP_001476089.1 157377489 5609717 complement(5336154..5337065) 1 NC_009831.1 KEGG: slo:Shew_3620 general secretion pathway protein C; general secretion pathway protein C 5337065 5609717 Ssed_4359 Shewanella sediminis HAW-EB3 general secretion pathway protein C YP_001476089.1 5336154 R 425104 CDS YP_001476090.1 157377490 5610939 5337323..5337721 1 NC_009831.1 KEGG: slo:Shew_3621 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 5337721 5610939 Ssed_4360 Shewanella sediminis HAW-EB3 RNA-binding S4 domain-containing protein YP_001476090.1 5337323 D 425104 CDS YP_001476091.1 157377491 5610940 5337834..5338694 1 NC_009831.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 5338694 hslO 5610940 hslO Shewanella sediminis HAW-EB3 Hsp33-like chaperonin YP_001476091.1 5337834 D 425104 CDS YP_001476092.1 157377492 5610941 5338899..5340440 1 NC_009831.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 5340440 5610941 Ssed_4362 Shewanella sediminis HAW-EB3 phosphoenolpyruvate carboxykinase YP_001476092.1 5338899 D 425104 CDS YP_001476093.1 157377493 5610942 5340810..5341232 1 NC_009831.1 KEGG: slo:Shew_3626 hypothetical protein; hypothetical protein 5341232 5610942 Ssed_4363 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476093.1 5340810 D 425104 CDS YP_001476094.1 157377494 5610743 5341240..5341476 1 NC_009831.1 KEGG: slo:Shew_3627 transcriptional regulator, XRE family; transcriptional regulator protein-like protein 5341476 5610743 Ssed_4364 Shewanella sediminis HAW-EB3 transcriptional regulator protein-like protein YP_001476094.1 5341240 D 425104 CDS YP_001476095.1 157377495 5610744 5341886..5343733 1 NC_009831.1 KEGG: son:SO0152 hypothetical carboxypeptidase; carboxypeptidase 5343733 5610744 Ssed_4365 Shewanella sediminis HAW-EB3 carboxypeptidase YP_001476095.1 5341886 D 425104 CDS YP_001476096.1 157377496 5610745 5344167..5345633 1 NC_009831.1 KEGG: mgm:Mmc1_0550 hypothetical protein; hypothetical protein 5345633 5610745 Ssed_4366 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476096.1 5344167 D 425104 CDS YP_001476097.1 157377497 5610746 5345774..5346256 1 NC_009831.1 KEGG: vpa:VP1222 cytochrome c-type protein; cytochrome c-type protein 5346256 5610746 Ssed_4367 Shewanella sediminis HAW-EB3 cytochrome c-type protein YP_001476097.1 5345774 D 425104 CDS YP_001476098.1 157377498 5610727 complement(5346427..5347221) 1 NC_009831.1 KEGG: shw:Sputw3181_3927 methyltransferase type 12; type 12 methyltransferase 5347221 5610727 Ssed_4368 Shewanella sediminis HAW-EB3 type 12 methyltransferase YP_001476098.1 5346427 R 425104 CDS YP_001476099.1 157377499 5610728 5347468..5348223 1 NC_009831.1 KEGG: shm:Shewmr7_0138 lipoprotein; lipoprotein 5348223 5610728 Ssed_4369 Shewanella sediminis HAW-EB3 lipoprotein YP_001476099.1 5347468 D 425104 CDS YP_001476100.1 157377500 5610729 complement(5349120..5349374) 1 NC_009831.1 KEGG: shw:Sputw3181_3936 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 5349374 5610729 Ssed_4370 Shewanella sediminis HAW-EB3 excinuclease ABC subunit C YP_001476100.1 5349120 R 425104 CDS YP_001476101.1 157377501 5610730 complement(5349371..5351560) 1 NC_009831.1 KEGG: sbl:Sbal_4218 oligopeptidase B; oligopeptidase B 5351560 5610730 Ssed_4371 Shewanella sediminis HAW-EB3 oligopeptidase B YP_001476101.1 5349371 R 425104 CDS YP_001476102.1 157377502 5610468 5352238..5352891 1 NC_009831.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 5352891 ribB 5610468 ribB Shewanella sediminis HAW-EB3 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001476102.1 5352238 D 425104 CDS YP_001476103.1 157377503 5610469 5353222..5356452 1 NC_009831.1 KEGG: slo:Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 5356452 5610469 Ssed_4373 Shewanella sediminis HAW-EB3 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001476103.1 5353222 D 425104 CDS YP_001476104.1 157377504 5610470 complement(5356576..5357103) 1 NC_009831.1 KEGG: slo:Shew_0042 ferritin, Dps family protein; ferroxidase 5357103 5610470 Ssed_4374 Shewanella sediminis HAW-EB3 ferroxidase YP_001476104.1 5356576 R 425104 CDS YP_001476105.1 157377505 5610471 5357367..5360483 1 NC_009831.1 KEGG: slo:Shew_0044 acriflavin resistance protein; acriflavin resistance protein 5360483 5610471 Ssed_4375 Shewanella sediminis HAW-EB3 acriflavin resistance protein YP_001476105.1 5357367 D 425104 CDS YP_001476106.1 157377506 5610633 5360483..5361595 1 NC_009831.1 KEGG: slo:Shew_0045 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 5361595 5610633 Ssed_4376 Shewanella sediminis HAW-EB3 RND family efflux transporter MFP subunit YP_001476106.1 5360483 D 425104 CDS YP_001476107.1 157377507 5610634 5361967..5363211 1 NC_009831.1 KEGG: slo:Shew_0046 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 5363211 5610634 Ssed_4377 Shewanella sediminis HAW-EB3 molybdenum cofactor synthesis domain-containing protein YP_001476107.1 5361967 D 425104 CDS YP_001476108.1 157377508 5610635 5363294..5364079 1 NC_009831.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 5364079 5610635 Ssed_4378 Shewanella sediminis HAW-EB3 molybdopterin biosynthesis protein MoeB YP_001476108.1 5363294 D 425104 CDS YP_001476109.1 157377509 5610636 complement(5364171..5364476) 1 NC_009831.1 KEGG: pfo:Pfl_3252 lipoprotein; lipoprotein 5364476 5610636 Ssed_4379 Shewanella sediminis HAW-EB3 lipoprotein YP_001476109.1 5364171 R 425104 CDS YP_001476110.1 157377510 5613500 5364684..5365682 1 NC_009831.1 KEGG: sdn:Sden_2943 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 5365682 5613500 Ssed_4380 Shewanella sediminis HAW-EB3 aminoglycoside phosphotransferase YP_001476110.1 5364684 D 425104 CDS YP_001476111.1 157377511 5613501 complement(5365717..5366391) 1 NC_009831.1 hypothetical protein 5366391 5613501 Ssed_4381 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476111.1 5365717 R 425104 CDS YP_001476112.1 157377512 5613502 complement(5366388..5366873) 1 NC_009831.1 KEGG: sde:Sde_2365 sigma-24 (FecI-like); sigma-24 FecI-like protein 5366873 5613502 Ssed_4382 Shewanella sediminis HAW-EB3 sigma-24 FecI-like protein YP_001476112.1 5366388 R 425104 CDS YP_001476113.1 157377513 5613503 complement(5366874..5367653) 1 NC_009831.1 KEGG: hypothetical protein; hypothetical protein 5367653 5613503 Ssed_4383 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476113.1 5366874 R 425104 CDS YP_001476114.1 157377514 5610818 complement(5367644..5368546) 1 NC_009831.1 KEGG: hch:HCH_00631 hypothetical protein; hypothetical protein 5368546 5610818 Ssed_4384 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476114.1 5367644 R 425104 CDS YP_001476115.1 157377515 5610819 complement(5368546..5368830) 1 NC_009831.1 KEGG: cps:CPS_0845 hypothetical protein; hypothetical protein 5368830 5610819 Ssed_4385 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476115.1 5368546 R 425104 CDS YP_001476116.1 157377516 5610820 complement(5369061..5370284) 1 NC_009831.1 KEGG: slo:Shew_0103 sodium/glutamate symporter; sodium/glutamate symporter 5370284 5610820 Ssed_4386 Shewanella sediminis HAW-EB3 sodium/glutamate symporter YP_001476116.1 5369061 R 425104 CDS YP_001476117.1 157377517 5610821 complement(5370621..5370779) 1 NC_009831.1 KEGG: shm:Shewmr7_3732 hypothetical protein; hypothetical protein 5370779 5610821 Ssed_4387 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476117.1 5370621 R 425104 CDS YP_001476118.1 157377518 5611347 5370926..5371705 1 NC_009831.1 KEGG: son:SO1260 hypothetical amino acid ABC transporter; amino acid ABC transporter 5371705 5611347 Ssed_4388 Shewanella sediminis HAW-EB3 amino acid ABC transporter YP_001476118.1 5370926 D 425104 CDS YP_001476119.1 157377519 5611348 complement(5371787..5371951) 1 NC_009831.1 KEGG: slo:Shew_0100 protein of unknown function UPF0057; hypothetical protein 5371951 5611348 Ssed_4389 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476119.1 5371787 R 425104 CDS YP_001476120.1 157377520 5611349 complement(5371975..5372649) 1 NC_009831.1 KEGG: slo:Shew_0099 pseudouridine synthase Rlu family protein, TIGR01621; pseudouridine synthase 5372649 5611349 Ssed_4390 Shewanella sediminis HAW-EB3 pseudouridine synthase YP_001476120.1 5371975 R 425104 CDS YP_001476121.1 157377521 5611350 complement(5372695..5373918) 1 NC_009831.1 KEGG: slo:Shew_0098 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 5373918 5611350 Ssed_4391 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001476121.1 5372695 R 425104 CDS YP_001476122.1 157377522 5609995 complement(5374001..5374678) 1 NC_009831.1 KEGG: slo:Shew_0097 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5374678 5609995 Ssed_4392 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001476122.1 5374001 R 425104 CDS YP_001476123.1 157377523 5609996 complement(5374688..5375224) 1 NC_009831.1 KEGG: slo:Shew_0096 hypothetical protein; hypothetical protein 5375224 5609996 Ssed_4393 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476123.1 5374688 R 425104 CDS YP_001476124.1 157377524 5609997 complement(5375380..5375739) 1 NC_009831.1 KEGG: slo:Shew_0095 conserved hypothetical protein 156; hypothetical protein 5375739 5609997 Ssed_4394 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476124.1 5375380 R 425104 CDS YP_001476125.1 157377525 5609998 complement(5375873..5376982) 1 NC_009831.1 KEGG: slo:Shew_0094 ABC transporter-related protein; ABC transporter-like protein 5376982 5609998 Ssed_4395 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001476125.1 5375873 R 425104 CDS YP_001476126.1 157377526 5610049 complement(5376963..5377643) 1 NC_009831.1 KEGG: slo:Shew_0093 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 5377643 5610049 Ssed_4396 Shewanella sediminis HAW-EB3 molybdate ABC transporter inner membrane subunit YP_001476126.1 5376963 R 425104 CDS YP_001476127.1 157377527 5610050 complement(5377647..5378462) 1 NC_009831.1 KEGG: slo:Shew_0092 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 5378462 5610050 Ssed_4397 Shewanella sediminis HAW-EB3 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001476127.1 5377647 R 425104 CDS YP_001476128.1 157377528 5610051 complement(5378512..5378976) 1 NC_009831.1 KEGG: slo:Shew_0091 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis protein MoaE 5378976 5610051 Ssed_4398 Shewanella sediminis HAW-EB3 molybdopterin biosynthesis protein MoaE YP_001476128.1 5378512 R 425104 CDS YP_001476129.1 157377529 5610052 complement(5378979..5379230) 1 NC_009831.1 KEGG: slo:Shew_0090 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 5379230 5610052 Ssed_4399 Shewanella sediminis HAW-EB3 molybdopterin converting factor subunit 1 YP_001476129.1 5378979 R 425104 CDS YP_001476130.1 157377530 5610601 complement(5379240..5379716) 1 NC_009831.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 5379716 moaC 5610601 moaC Shewanella sediminis HAW-EB3 molybdenum cofactor biosynthesis protein MoaC YP_001476130.1 5379240 R 425104 CDS YP_001476131.1 157377531 5610602 complement(5379797..5380321) 1 NC_009831.1 KEGG: slo:Shew_0088 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B 5380321 5610602 Ssed_4401 Shewanella sediminis HAW-EB3 molybdenum cofactor biosynthesis protein B YP_001476131.1 5379797 R 425104 CDS YP_001476132.1 157377532 5610603 complement(5380505..5381485) 1 NC_009831.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 5381485 moaA 5610603 moaA Shewanella sediminis HAW-EB3 molybdenum cofactor biosynthesis protein A YP_001476132.1 5380505 R 425104 CDS YP_001476133.1 157377533 5609711 5381835..5383484 1 NC_009831.1 KEGG: slo:Shew_0086 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 5383484 5609711 Ssed_4403 Shewanella sediminis HAW-EB3 electron-transferring-flavoprotein dehydrogenase YP_001476133.1 5381835 D 425104 CDS YP_001476134.1 157377534 5609712 5383782..5385698 1 NC_009831.1 KEGG: slo:Shew_0085 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5385698 5609712 Ssed_4404 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001476134.1 5383782 D 425104 CDS YP_001476135.1 157377535 5609713 complement(5385831..5386199) 1 NC_009831.1 KEGG: slo:Shew_0084 hypothetical protein; hypothetical protein 5386199 5609713 Ssed_4405 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476135.1 5385831 R 425104 CDS YP_001476136.1 157377536 5609714 complement(5386236..5386934) 1 NC_009831.1 KEGG: slo:Shew_0083 MOSC domain containing protein; MOSC domain-containing protein 5386934 5609714 Ssed_4406 Shewanella sediminis HAW-EB3 MOSC domain-containing protein YP_001476136.1 5386236 R 425104 CDS YP_001476137.1 157377537 5610780 5387103..5387555 1 NC_009831.1 KEGG: slo:Shew_0082 hypothetical protein; hypothetical protein 5387555 5610780 Ssed_4407 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476137.1 5387103 D 425104 CDS YP_001476138.1 157377538 5610781 5387628..5388356 1 NC_009831.1 KEGG: slo:Shew_0081 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5388356 5610781 Ssed_4408 Shewanella sediminis HAW-EB3 two component transcriptional regulator YP_001476138.1 5387628 D 425104 CDS YP_001476139.1 157377539 5610782 5388391..5389674 1 NC_009831.1 KEGG: slo:Shew_0080 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 5389674 5610782 Ssed_4409 Shewanella sediminis HAW-EB3 integral membrane sensor signal transduction histidine kinase YP_001476139.1 5388391 D 425104 CDS YP_001476140.1 157377540 5610783 5389862..5390374 1 NC_009831.1 KEGG: sdn:Sden_0559 hypothetical protein; hypothetical protein 5390374 5610783 Ssed_4410 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476140.1 5389862 D 425104 CDS YP_001476141.1 157377541 5610585 complement(5390403..5391860) 1 NC_009831.1 KEGG: she:Shewmr4_0268 diguanylate cyclase; diguanylate cyclase 5391860 5610585 Ssed_4411 Shewanella sediminis HAW-EB3 diguanylate cyclase YP_001476141.1 5390403 R 425104 CDS YP_001476142.1 157377542 5610586 complement(5392180..5393019) 1 NC_009831.1 KEGG: shn:Shewana3_0268 site-specific DNA-methyltransferase (adenine-specific); site-specific DNA-methyltransferase (adenine-specific) 5393019 5610586 Ssed_4412 Shewanella sediminis HAW-EB3 site-specific DNA-methyltransferase (adenine-specific) YP_001476142.1 5392180 R 425104 CDS YP_001476143.1 157377543 5610587 complement(5393111..5393668) 1 NC_009831.1 KEGG: slo:Shew_0077 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5393668 5610587 Ssed_4413 Shewanella sediminis HAW-EB3 N-acetyltransferase GCN5 YP_001476143.1 5393111 R 425104 CDS YP_001476144.1 157377544 5610588 complement(5394349..5395686) 1 NC_009831.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 5395686 5610588 Ssed_4414 Shewanella sediminis HAW-EB3 coproporphyrinogen III oxidase YP_001476144.1 5394349 R 425104 CDS YP_001476145.1 157377545 5613024 complement(5396098..5397084) 1 NC_009831.1 KEGG: son:SO4515 formate dehydrogenase, C subunit; formate dehydrogenase, C subunit 5397084 5613024 Ssed_4415 Shewanella sediminis HAW-EB3 formate dehydrogenase, C subunit YP_001476145.1 5396098 R 425104 CDS YP_001476146.1 157377546 5613025 complement(5397290..5397859) 1 NC_009831.1 KEGG: slo:Shew_0064 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5397859 5613025 Ssed_4416 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001476146.1 5397290 R 425104 CDS YP_001476147.1 157377547 5613026 complement(5397888..5400743) 1 NC_009831.1 KEGG: slo:Shew_0063 molybdopterin oxidoreductase; molybdopterin oxidoreductase 5400743 5613026 Ssed_4417 Shewanella sediminis HAW-EB3 molybdopterin oxidoreductase YP_001476147.1 5397888 R 425104 CDS YP_001476148.1 157377548 5613027 complement(5400762..5400959) 1 NC_009831.1 KEGG: slo:Shew_0062 hypothetical protein; hypothetical protein 5400959 5613027 Ssed_4418 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476148.1 5400762 R 425104 CDS YP_001476149.1 157377549 5610521 complement(5401581..5402588) 1 NC_009831.1 KEGG: slo:Shew_0061 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 5402588 5610521 Ssed_4419 Shewanella sediminis HAW-EB3 formate dehydrogenase subunit gamma YP_001476149.1 5401581 R 425104 CDS YP_001476150.1 157377550 5610522 complement(5402649..5403239) 1 NC_009831.1 KEGG: slo:Shew_0060 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5403239 5610522 Ssed_4420 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001476150.1 5402649 R 425104 CDS YP_001476151.1 157377551 5610523 complement(5403267..5406116) 1 NC_009831.1 KEGG: slo:Shew_0059 molybdopterin oxidoreductase; molybdopterin oxidoreductase 5406116 5610523 Ssed_4421 Shewanella sediminis HAW-EB3 molybdopterin oxidoreductase YP_001476151.1 5403267 R 425104 CDS YP_001476152.1 157377552 5610524 complement(5406153..5406353) 1 NC_009831.1 KEGG: slo:Shew_0058 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 5406353 5610524 Ssed_4422 Shewanella sediminis HAW-EB3 twin-arginine translocation pathway signal YP_001476152.1 5406153 R 425104 CDS YP_001476153.1 157377553 5612305 complement(5406537..5407232) 1 NC_009831.1 KEGG: slo:Shew_0057 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 5407232 5612305 Ssed_4423 Shewanella sediminis HAW-EB3 cytoplasmic chaperone TorD family protein YP_001476153.1 5406537 R 425104 CDS YP_001476154.1 157377554 5612306 complement(5407243..5408934) 1 NC_009831.1 KEGG: slo:Shew_0056 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5408934 5612306 Ssed_4424 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001476154.1 5407243 R 425104 CDS YP_001476155.1 157377555 5612307 complement(5409163..5409786) 1 NC_009831.1 KEGG: slo:Shew_0055 hypothetical protein; hypothetical protein 5409786 5612307 Ssed_4425 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476155.1 5409163 R 425104 CDS YP_001476156.1 157377556 5612308 complement(5409786..5410256) 1 NC_009831.1 KEGG: slo:Shew_0054 hypothetical protein; hypothetical protein 5410256 5612308 Ssed_4426 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476156.1 5409786 R 425104 CDS YP_001476157.1 157377557 5611663 5410511..5411398 1 NC_009831.1 KEGG: slo:Shew_0053 formate dehydrogenase, subunit FdhD; formate dehydrogenase subunit FdhD 5411398 5611663 Ssed_4427 Shewanella sediminis HAW-EB3 formate dehydrogenase subunit FdhD YP_001476157.1 5410511 D 425104 CDS YP_001476158.1 157377558 5611664 5411486..5412391 1 NC_009831.1 KEGG: slo:Shew_0052 DNA binding domain, excisionase family; DNA binding domain-containing protein 5412391 5611664 Ssed_4428 Shewanella sediminis HAW-EB3 DNA binding domain-containing protein YP_001476158.1 5411486 D 425104 CDS YP_001476159.1 157377559 5611665 complement(5413578..5414792) 1 NC_009831.1 KEGG: slo:Shew_3741 protein of unknown function DUF890; SAM-dependent methyltransferase 5414792 5611665 Ssed_4429 Shewanella sediminis HAW-EB3 SAM-dependent methyltransferase YP_001476159.1 5413578 R 425104 CDS YP_001476160.1 157377560 5611666 complement(5414852..5415265) 1 NC_009831.1 KEGG: slo:Shew_3742 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL-like protein 5415265 5611666 Ssed_4430 Shewanella sediminis HAW-EB3 flagellar basal body-associated protein FliL-like protein YP_001476160.1 5414852 R 425104 CDS YP_001476161.1 157377561 5609639 5415374..5415937 1 NC_009831.1 KEGG: slo:Shew_3743 chorismate lyase; chorismate lyase 5415937 5609639 Ssed_4431 Shewanella sediminis HAW-EB3 chorismate lyase YP_001476161.1 5415374 D 425104 CDS YP_001476162.1 157377562 5609640 complement(5416013..5418868) 1 NC_009831.1 KEGG: slo:Shew_3744 peptidase M6, immune inhibitor A; peptidase M6, immune inhibitor A 5418868 5609640 Ssed_4432 Shewanella sediminis HAW-EB3 peptidase M6, immune inhibitor A YP_001476162.1 5416013 R 425104 CDS YP_001476163.1 157377563 5609641 complement(5418883..5419206) 1 NC_009831.1 KEGG: sdn:Sden_0093 hypothetical protein; hypothetical protein 5419206 5609641 Ssed_4433 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476163.1 5418883 R 425104 CDS YP_001476164.1 157377564 5609642 complement(5419390..5421546) 1 NC_009831.1 KEGG: slo:Shew_3745 glycoside hydrolase, family 37; glycoside hydrolase 5421546 5609642 Ssed_4434 Shewanella sediminis HAW-EB3 glycoside hydrolase YP_001476164.1 5419390 R 425104 CDS YP_001476165.1 157377565 5609942 complement(5421963..5422568) 1 NC_009831.1 KEGG: slo:Shew_3746 multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 5422568 5609942 Ssed_4435 Shewanella sediminis HAW-EB3 multiple antibiotic resistance (MarC)-like protein YP_001476165.1 5421963 R 425104 CDS YP_001476166.1 157377566 5609943 5422807..5424336 1 NC_009831.1 KEGG: slo:Shew_3747 hypothetical protein; hypothetical protein 5424336 5609943 Ssed_4436 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476166.1 5422807 D 425104 CDS YP_001476167.1 157377567 5609944 5424546..5425307 1 NC_009831.1 KEGG: slo:Shew_3748 protein of unknown function DUF833; hypothetical protein 5425307 5609944 Ssed_4437 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476167.1 5424546 D 425104 CDS YP_001476168.1 157377568 5609945 complement(5425288..5425851) 1 NC_009831.1 KEGG: pat:Patl_3910 hypothetical protein; hypothetical protein 5425851 5609945 Ssed_4438 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476168.1 5425288 R 425104 CDS YP_001476169.1 157377569 5611468 complement(5425975..5426397) 1 NC_009831.1 KEGG: slo:Shew_3749 hypothetical protein; hypothetical protein 5426397 5611468 Ssed_4439 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476169.1 5425975 R 425104 CDS YP_001476170.1 157377570 5611469 5426839..5427408 1 NC_009831.1 KEGG: slo:Shew_3750 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 5427408 5611469 Ssed_4440 Shewanella sediminis HAW-EB3 phospholipid/glycerol acyltransferase YP_001476170.1 5426839 D 425104 CDS YP_001476171.1 157377571 5611470 5427494..5428120 1 NC_009831.1 KEGG: slo:Shew_3751 lysine exporter protein (LysE/YggA); lysine exporter protein (LysE/YggA) 5428120 5611470 Ssed_4441 Shewanella sediminis HAW-EB3 lysine exporter protein (LysE/YggA) YP_001476171.1 5427494 D 425104 CDS YP_001476172.1 157377572 5611471 complement(5428304..5429566) 1 NC_009831.1 KEGG: shw:Sputw3181_3954 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 5429566 5611471 Ssed_4442 Shewanella sediminis HAW-EB3 mechanosensitive ion channel protein MscS YP_001476172.1 5428304 R 425104 CDS YP_001476173.1 157377573 5610931 5429763..5430299 1 NC_009831.1 KEGG: slo:Shew_3753 hypothetical protein; hypothetical protein 5430299 5610931 Ssed_4443 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476173.1 5429763 D 425104 CDS YP_001476174.1 157377574 5610932 5430392..5431018 1 NC_009831.1 KEGG: slo:Shew_3754 hypothetical protein; hypothetical protein 5431018 5610932 Ssed_4444 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476174.1 5430392 D 425104 CDS YP_001476175.1 157377575 5610933 complement(5431147..5431647) 1 NC_009831.1 KEGG: slo:Shew_3755 thioesterase superfamily protein; thioesterase superfamily protein 5431647 5610933 Ssed_4445 Shewanella sediminis HAW-EB3 thioesterase superfamily protein YP_001476175.1 5431147 R 425104 CDS YP_001476176.1 157377576 5610934 complement(5431866..5433398) 1 NC_009831.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 5433398 5610934 Ssed_4446 Shewanella sediminis HAW-EB3 histidine ammonia-lyase YP_001476176.1 5431866 R 425104 CDS YP_001476177.1 157377577 5610913 complement(5433402..5435072) 1 NC_009831.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 5435072 5610913 Ssed_4447 Shewanella sediminis HAW-EB3 urocanate hydratase YP_001476177.1 5433402 R 425104 CDS YP_001476178.1 157377578 5610914 complement(5435247..5435948) 1 NC_009831.1 KEGG: slo:Shew_3758 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor 5435948 5610914 Ssed_4448 Shewanella sediminis HAW-EB3 histidine utilization repressor YP_001476178.1 5435247 R 425104 CDS YP_001476179.1 157377579 5610915 5436144..5437370 1 NC_009831.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 5437370 5610915 Ssed_4449 Shewanella sediminis HAW-EB3 imidazolonepropionase YP_001476179.1 5436144 D 425104 CDS YP_001476180.1 157377580 5613422 complement(5437632..5438384) 1 NC_009831.1 hypothetical protein 5438384 5613422 Ssed_4450 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476180.1 5437632 R 425104 CDS YP_001476181.1 157377581 5613423 complement(5438990..5439538) 1 NC_009831.1 KEGG: saz:Sama_3428 outer membrane protein; outer membrane protein 5439538 5613423 Ssed_4451 Shewanella sediminis HAW-EB3 outer membrane protein YP_001476181.1 5438990 R 425104 CDS YP_001476182.1 157377582 5613424 complement(5440024..5441208) 1 NC_009831.1 KEGG: slo:Shew_3769 hypothetical protein; hypothetical protein 5441208 5613424 Ssed_4452 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476182.1 5440024 R 425104 CDS YP_001476183.1 157377583 5613425 complement(5441444..5442244) 1 NC_009831.1 KEGG: slo:Shew_3770 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 5442244 5613425 Ssed_4453 Shewanella sediminis HAW-EB3 Sel1 domain-containing protein YP_001476183.1 5441444 R 425104 CDS YP_001476184.1 157377584 5613438 5442504..5443181 1 NC_009831.1 KEGG: slo:Shew_3771 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5443181 5613438 Ssed_4454 Shewanella sediminis HAW-EB3 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_001476184.1 5442504 D 425104 CDS YP_001476185.1 157377585 5613439 complement(5443346..5444116) 1 NC_009831.1 KEGG: slo:Shew_3010 hypothetical protein; hypothetical protein 5444116 5613439 Ssed_4455 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476185.1 5443346 R 425104 CDS YP_001476186.1 157377586 5613440 5444215..5444649 1 NC_009831.1 KEGG: sdn:Sden_0074 thioesterase superfamily; thioesterase superfamily protein 5444649 5613440 Ssed_4456 Shewanella sediminis HAW-EB3 thioesterase superfamily protein YP_001476186.1 5444215 D 425104 CDS YP_001476187.1 157377587 5613441 5444674..5444931 1 NC_009831.1 KEGG: spc:Sputcn32_0065 hypothetical protein; hypothetical protein 5444931 5613441 Ssed_4457 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476187.1 5444674 D 425104 CDS YP_001476188.1 157377588 5613385 complement(5445012..5445416) 1 NC_009831.1 KEGG: slo:Shew_3775 thioesterase superfamily protein; thioesterase superfamily protein 5445416 5613385 Ssed_4458 Shewanella sediminis HAW-EB3 thioesterase superfamily protein YP_001476188.1 5445012 R 425104 CDS YP_001476189.1 157377589 5613386 complement(5445862..5447658) 1 NC_009831.1 KEGG: slo:Shew_3776 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5447658 5613386 Ssed_4459 Shewanella sediminis HAW-EB3 AMP-dependent synthetase/ligase YP_001476189.1 5445862 R 425104 CDS YP_001476190.1 157377590 5613387 5448143..5449744 1 NC_009831.1 KEGG: slo:Shew_3780 TAP domain protein; TAP domain-containing protein 5449744 5613387 Ssed_4460 Shewanella sediminis HAW-EB3 TAP domain-containing protein YP_001476190.1 5448143 D 425104 CDS YP_001476191.1 157377591 5613388 5449737..5450471 1 NC_009831.1 KEGG: slo:Shew_3781 ABC transporter-related protein; ABC transporter-like protein 5450471 5613388 Ssed_4461 Shewanella sediminis HAW-EB3 ABC transporter-like protein YP_001476191.1 5449737 D 425104 CDS YP_001476192.1 157377592 5613242 5450548..5451696 1 NC_009831.1 KEGG: slo:Shew_3782 ABC-2 type transporter; ABC transporter 5451696 5613242 Ssed_4462 Shewanella sediminis HAW-EB3 ABC transporter YP_001476192.1 5450548 D 425104 CDS YP_001476193.1 157377593 5613243 complement(5451956..5453614) 1 NC_009831.1 KEGG: shn:Shewana3_3611 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5453614 5613243 Ssed_4463 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis sensory transducer YP_001476193.1 5451956 R 425104 CDS YP_001476194.1 157377594 5613244 complement(5453919..5454452) 1 NC_009831.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 5454452 mogA 5613244 mogA Shewanella sediminis HAW-EB3 molybdenum cofactor biosynthesis protein MogA YP_001476194.1 5453919 R 425104 CDS YP_001476195.1 157377595 5613245 complement(5454623..5455075) 1 NC_009831.1 KEGG: shn:Shewana3_0063 NLP/P60 protein; NLP/P60 protein 5455075 5613245 Ssed_4465 Shewanella sediminis HAW-EB3 NLP/P60 protein YP_001476195.1 5454623 R 425104 CDS YP_001476196.1 157377596 5613004 complement(5455081..5456265) 1 NC_009831.1 KEGG: son:SO0054 conserved hypothetical protein TIGR00275; hypothetical protein 5456265 5613004 Ssed_4466 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476196.1 5455081 R 425104 CDS YP_001476197.1 157377597 5613005 complement(5456396..5457412) 1 NC_009831.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 5457412 gpsA 5613005 gpsA Shewanella sediminis HAW-EB3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001476197.1 5456396 R 425104 CDS YP_001476198.1 157377598 5613006 complement(5457533..5458021) 1 NC_009831.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 5458021 5613006 Ssed_4468 Shewanella sediminis HAW-EB3 preprotein translocase subunit SecB YP_001476198.1 5457533 R 425104 CDS YP_001476199.1 157377599 5613007 complement(5458250..5458684) 1 NC_009831.1 KEGG: slo:Shew_3805 rhodanese domain protein; rhodanese domain-containing protein 5458684 5613007 Ssed_4469 Shewanella sediminis HAW-EB3 rhodanese domain-containing protein YP_001476199.1 5458250 R 425104 CDS YP_001476200.1 157377600 5613152 5458925..5460469 1 NC_009831.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 5460469 5613152 Ssed_4470 Shewanella sediminis HAW-EB3 phosphoglyceromutase YP_001476200.1 5458925 D 425104 CDS YP_001476201.1 157377601 5613153 5460480..5461613 1 NC_009831.1 KEGG: slo:Shew_3807 peptidase M23B; peptidase M23B 5461613 5613153 Ssed_4471 Shewanella sediminis HAW-EB3 peptidase M23B YP_001476201.1 5460480 D 425104 CDS YP_001476202.1 157377602 5613154 5461647..5462852 1 NC_009831.1 KEGG: slo:Shew_3808 carboxyl-terminal protease; C-terminal processing peptidase 5462852 5613154 Ssed_4472 Shewanella sediminis HAW-EB3 C-terminal processing peptidase YP_001476202.1 5461647 D 425104 CDS YP_001476203.1 157377603 5613155 5462886..5463647 1 NC_009831.1 KEGG: slo:Shew_3809 protein of unknown function DUF610, YibQ; hypothetical protein 5463647 5613155 Ssed_4473 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476203.1 5462886 D 425104 CDS YP_001476204.1 157377604 5612864 complement(5463718..5464173) 1 NC_009831.1 KEGG: sbl:Sbal_4336 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 5464173 5612864 Ssed_4474 Shewanella sediminis HAW-EB3 BadM/Rrf2 family transcriptional regulator YP_001476204.1 5463718 R 425104 CDS YP_001476205.1 157377605 5612865 complement(5464196..5464447) 1 NC_009831.1 KEGG: shm:Shewmr7_0038 protein of unknown function UPF0153; hypothetical protein 5464447 5612865 Ssed_4475 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476205.1 5464196 R 425104 CDS YP_001476206.1 157377606 5612796 complement(5478248..5479687) 1 NC_009831.1 KEGG: slo:Shew_3812 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5479687 5612796 Ssed_4476 Shewanella sediminis HAW-EB3 4Fe-4S ferredoxin YP_001476206.1 5478248 R 425104 CDS YP_001476207.1 157377607 5612867 5479778..5480131 1 NC_009831.1 KEGG: slo:Shew_3813 hypothetical protein; hypothetical protein 5480131 5612867 Ssed_4477 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476207.1 5479778 D 425104 CDS YP_001476208.1 157377608 5612957 5480254..5481159 1 NC_009831.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 5481159 5612957 Ssed_4478 Shewanella sediminis HAW-EB3 naphthoate synthase YP_001476208.1 5480254 D 425104 CDS YP_001476209.1 157377609 5612958 5481377..5481583 1 NC_009831.1 KEGG: sbl:Sbal_4341 hypothetical protein; hypothetical protein 5481583 5612958 Ssed_4479 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476209.1 5481377 D 425104 CDS YP_001476210.1 157377610 5612959 5481783..5482856 1 NC_009831.1 KEGG: sfr:Sfri_3878 integrase, catalytic region; integrase, catalytic region 5482856 5612959 Ssed_4480 Shewanella sediminis HAW-EB3 integrase, catalytic region YP_001476210.1 5481783 D 425104 CDS YP_001476211.1 157377611 5612960 complement(5483097..5484926) 1 NC_009831.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 5484926 5612960 Ssed_4481 Shewanella sediminis HAW-EB3 glucosamine--fructose-6-phosphate aminotransferase YP_001476211.1 5483097 R 425104 CDS YP_001476212.1 157377612 5612654 complement(5484991..5485761) 1 NC_009831.1 KEGG: shw:Sputw3181_4049 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 5485761 5612654 Ssed_4482 Shewanella sediminis HAW-EB3 DeoR family transcriptional regulator YP_001476212.1 5484991 R 425104 CDS YP_001476213.1 157377613 5612655 complement(5485952..5488090) 1 NC_009831.1 KEGG: slo:Shew_3841 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 5488090 5612655 Ssed_4483 Shewanella sediminis HAW-EB3 TonB-dependent siderophore receptor YP_001476213.1 5485952 R 425104 CDS YP_001476214.1 157377614 5612656 complement(5488320..5489687) 1 NC_009831.1 KEGG: slo:Shew_3842 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 5489687 5612656 Ssed_4484 Shewanella sediminis HAW-EB3 UDP-N-acetylglucosamine pyrophosphorylase YP_001476214.1 5488320 R 425104 CDS YP_001476215.1 157377615 5612657 complement(5489883..5490311) 1 NC_009831.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 5490311 atpC 5612657 atpC Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit epsilon YP_001476215.1 5489883 R 425104 CDS YP_001476216.1 157377616 5612616 complement(5490371..5491747) 1 NC_009831.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 5491747 5612616 Ssed_4486 Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit beta YP_001476216.1 5490371 R 425104 CDS YP_001476217.1 157377617 5612617 complement(5491783..5492643) 1 NC_009831.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 5492643 5612617 Ssed_4487 Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit gamma YP_001476217.1 5491783 R 425104 CDS YP_001476218.1 157377618 5612618 complement(5492691..5494232) 1 NC_009831.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 5494232 5612618 Ssed_4488 Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit alpha YP_001476218.1 5492691 R 425104 CDS YP_001476219.1 157377619 5612619 complement(5494247..5494780) 1 NC_009831.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 5494780 5612619 Ssed_4489 Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit delta YP_001476219.1 5494247 R 425104 CDS YP_001476220.1 157377620 5612566 complement(5494797..5495267) 1 NC_009831.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 5495267 5612566 Ssed_4490 Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit B YP_001476220.1 5494797 R 425104 CDS YP_001476221.1 157377621 5612567 complement(5495305..5495556) 1 NC_009831.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 5495556 5612567 Ssed_4491 Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit C YP_001476221.1 5495305 R 425104 CDS YP_001476222.1 157377622 5612568 complement(5495623..5496417) 1 NC_009831.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 5496417 5612568 Ssed_4492 Shewanella sediminis HAW-EB3 F0F1 ATP synthase subunit A YP_001476222.1 5495623 R 425104 CDS YP_001476223.1 157377623 5612569 complement(5496421..5496813) 1 NC_009831.1 KEGG: slo:Shew_3852 ATP synthase I chain; ATP synthase I chain 5496813 5612569 Ssed_4493 Shewanella sediminis HAW-EB3 ATP synthase I chain YP_001476223.1 5496421 R 425104 CDS YP_001476224.1 157377624 5612513 complement(5497040..5497924) 1 NC_009831.1 KEGG: saz:Sama_3652 ParB family protein; ParB family protein 5497924 5612513 Ssed_4494 Shewanella sediminis HAW-EB3 ParB family protein YP_001476224.1 5497040 R 425104 CDS YP_001476225.1 157377625 5612514 complement(5497940..5498728) 1 NC_009831.1 KEGG: slo:Shew_3854 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 5498728 5612514 Ssed_4495 Shewanella sediminis HAW-EB3 cobyrinic acid a,c-diamide synthase YP_001476225.1 5497940 R 425104 CDS YP_001476226.1 157377626 5612515 complement(5498819..5499439) 1 NC_009831.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 5499439 gidB 5612515 gidB Shewanella sediminis HAW-EB3 16S rRNA methyltransferase GidB YP_001476226.1 5498819 R 425104 CDS YP_001476227.1 157377627 5612534 complement(5499562..5501460) 1 NC_009831.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 5501460 5612534 Ssed_4497 Shewanella sediminis HAW-EB3 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001476227.1 5499562 R 425104 CDS YP_001476228.1 157377628 5612535 complement(5501921..5502361) 1 NC_009831.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 5502361 5612535 Ssed_4498 Shewanella sediminis HAW-EB3 flavodoxin YP_001476228.1 5501921 R 425104 CDS YP_001476229.1 157377629 5612536 complement(5502592..5503392) 1 NC_009831.1 KEGG: slo:Shew_3858 ubiquinone biosynthesis O-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 5503392 5612536 Ssed_4499 Shewanella sediminis HAW-EB3 3-demethylubiquinone-9 3-methyltransferase YP_001476229.1 5502592 R 425104 CDS YP_001476230.1 157377630 5612537 complement(5503606..5505009) 1 NC_009831.1 KEGG: ppr:PBPRB1866 hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 5505009 5612537 Ssed_4500 Shewanella sediminis HAW-EB3 methyl-accepting chemotaxis protein YP_001476230.1 5503606 R 425104 CDS YP_001476231.1 157377631 5612489 complement(5505656..5506300) 1 NC_009831.1 KEGG: sfr:Sfri_3118 lysine exporter protein (LysE/YggA); lysine exporter protein (LysE/YggA) 5506300 5612489 Ssed_4501 Shewanella sediminis HAW-EB3 lysine exporter protein (LysE/YggA) YP_001476231.1 5505656 R 425104 CDS YP_001476232.1 157377632 5612490 5507251..5508180 1 NC_009831.1 KEGG: cps:CPS_2413 SEC-C motif domain protein; hypothetical protein 5508180 5612490 Ssed_4502 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476232.1 5507251 D 425104 CDS YP_001476233.1 157377633 5612491 complement(5508547..5511705) 1 NC_009831.1 KEGG: sbl:Sbal_0362 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 5511705 5612491 Ssed_4503 Shewanella sediminis HAW-EB3 type III restriction enzyme, res subunit YP_001476233.1 5508547 R 425104 CDS YP_001476234.1 157377634 5612492 5511838..5512245 1 NC_009831.1 KEGG: she:Shewmr4_3199 hypothetical protein; hypothetical protein 5512245 5612492 Ssed_4504 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476234.1 5511838 D 425104 CDS YP_001476235.1 157377635 5612435 complement(5512216..5512482) 1 NC_009831.1 hypothetical protein 5512482 5612435 Ssed_4505 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476235.1 5512216 R 425104 CDS YP_001476236.1 157377636 5612436 complement(5512518..5513615) 1 NC_009831.1 KEGG: spc:Sputcn32_3625 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 5513615 5612436 Ssed_4506 Shewanella sediminis HAW-EB3 filamentation induced by cAMP protein fic YP_001476236.1 5512518 R 425104 CDS YP_001476237.1 157377637 5612437 5513867..5514634 1 NC_009831.1 KEGG: sfr:Sfri_3844 hypothetical protein; hypothetical protein 5514634 5612437 Ssed_4507 Shewanella sediminis HAW-EB3 hypothetical protein YP_001476237.1 5513867 D 425104 CDS YP_001476238.1 157377638 5612438 5514650..5517292 1 NC_009831.1 KEGG: vpa:VP1259 ATP-dependent helicase; ATP-dependent helicase 5517292 5612438 Ssed_4508 Shewanella sediminis HAW-EB3 ATP-dependent helicase YP_001476238.1 5514650 D 425104 CDS