-- dump date 20240420_120616 -- class Genbank::Contig -- table contig_comment -- id comment NC_010506.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP000961.1.REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen ZhaoREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca)REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca)REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 12 of 36REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 12 of 36 Pseudo Genes (incomplete) :: 24 of 36REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 12 of 36 Pseudo Genes (incomplete) :: 24 of 36 Pseudo Genes (internal stop) :: 12 of 36REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 12 of 36 Pseudo Genes (incomplete) :: 24 of 36 Pseudo Genes (internal stop) :: 12 of 36 Pseudo Genes (multiple problems) :: 10 of 36REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 12 of 36 Pseudo Genes (incomplete) :: 24 of 36 Pseudo Genes (internal stop) :: 12 of 36 Pseudo Genes (multiple problems) :: 10 of 36 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP000961.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002759 Source DNA and bacteria available from Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Contacts: Jian-Shen Zhao (Jian-Shen.Zhao@cnrc-nrc.gc.ca) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfmpageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/14/2024 01:05:39 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,096 CDSs (total) :: 4,931 Genes (coding) :: 4,895 CDSs (with protein) :: 4,895 Genes (RNA) :: 165 rRNAs :: 11, 10, 10 (5S, 16S, 23S) complete rRNAs :: 11, 10, 10 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 36 CDSs (without protein) :: 36 Pseudo Genes (ambiguous residues) :: 0 of 36 Pseudo Genes (frameshifted) :: 12 of 36 Pseudo Genes (incomplete) :: 24 of 36 Pseudo Genes (internal stop) :: 12 of 36 Pseudo Genes (multiple problems) :: 10 of 36 ##Genome-Annotation-Data-END## COMPLETENESS: full length.