-- dump date 20140620_065240 -- class Genbank::CDS -- table cds_note -- id note NP_835743.1 residues 1 to 21 of 21 are 100 pct identical to residues 1 to 21 of 21 from Escherichia coli K-12 : B0001 NP_835744.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways NP_835745.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate NP_835746.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_835747.1 residues 1 to 65 of 95 are 60.00 pct identical to residues 4 to 68 of 98 from Escherichia coli K-12 : B0005 NP_835748.1 residues 1 to 258 of 258 are 100.00 pct identical to residues 1 to 258 of 258 from Escherichia coli K-12 : B0006 NP_835749.1 Maintains the balance of metabolites in the pentose-phosphate pathway NP_835750.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis NP_835751.1 residues 1 to 188 of 188 are 92.02 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B0010 NP_835752.1 residues 1 to 237 of 237 are 82.27 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B0011 NP_835754.1 residues 1 to 134 of 134 are 99.25 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B0013 NP_835755.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_835756.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion NP_835757.1 residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B0018; regulated cell killing NP_835758.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH NP_835759.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC NP_835760.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_835761.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_835762.2 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase NP_835763.1 residues 1 to 72 of 72 are 98.61 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B0024 NP_835764.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities NP_835765.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme NP_835766.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis NP_835767.1 residues 1 to 149 of 149 are 100.00 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B0028 NP_835768.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway NP_835769.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides NP_835770.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis NP_835771.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers NP_835772.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity NP_835773.2 regulator of carnitine metabolism; induces the caiTABCDE and fixABCX operons NP_835774.1 involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities NP_835775.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA NP_835776.1 residues 1 to 522 of 522 are 95.59 pct identical to residues 1 to 522 of 522 from Escherichia coli K-12 : B0037 NP_835777.1 catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine NP_835778.1 catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA NP_835779.1 catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism NP_835780.2 required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase NP_835781.1 FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction NP_835782.1 residues 1 to 95 of 95 are 98.94 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B0044 NP_835783.1 residues 1 to 443 of 464 are 97.06 pct identical to residues 1 to 443 of 443 from Escherichia coli K-12 : B0045 NP_835784.1 Required for full activity of KefC, a potassium-proton antiporter NP_835785.1 transport system that facilitates potassium-efflux NP_835786.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate NP_835787.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP NP_835788.1 protein associated with Co2+ and Mg2+ efflux NP_835789.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin NP_835790.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) NP_835791.1 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB NP_835792.1 determines N-hexane tolerance and is involved in outer membrane permeability NP_835793.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system NP_835794.1 catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs NP_835795.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA NP_835796.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C NP_835797.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source NP_835798.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism NP_835799.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate NP_835800.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose NP_835801.1 residues 1 to 254 of 254 are 99.21 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 : B0065 NP_835802.1 with TbpA and ThiP is part of the thiamine and TPP transport system NP_835803.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine NP_835804.1 part of the thiamine and TPP transport system tbpA-thiPQ NP_835805.1 activates sgrS under glucose-phosphate stress conditions NP_835806.1 residues 1 to 392 of 392 are 97.95 pct identical to residues 1 to 392 of 392 from Escherichia coli K-12 : B0070 NP_835807.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D NP_835808.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate NP_835809.2 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis NP_835810.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis NP_835811.1 involved in attenuation control of the leuABCD operon in leucine biosynthesis NP_835812.2 activator for leuABCD operon; member of LysR family of transcriptional activators NP_835813.2 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive NP_835814.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit NP_835816.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism NP_835817.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_835818.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_835819.1 MraZ; UPF0040; crystal structure shows similarity to AbrB NP_835820.1 residues 1 to 313 of 313 are 95.20 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 : B0082 NP_835821.1 membrane bound cell division protein at septum containing leucine zipper motif NP_835822.1 residues 1 to 588 of 588 are 96.76 pct identical to residues 1 to 588 of 588 from Escherichia coli K-12 : B0084; involved in septum formation NP_835823.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate NP_835824.1 residues 1 to 452 of 452 are 94.91 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 : B0086 NP_835825.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan NP_835826.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation NP_835827.1 integral membrane protein involved in stabilizing FstZ ring during cell division NP_835828.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis NP_835829.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis NP_835830.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli NP_835831.1 involved in septum formation NP_835832.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane NP_835833.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function NP_835834.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis NP_835835.2 secM translational pause allows for the initiation of secA translation NP_835836.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins NP_835837.1 residues 1 to 129 of 129 are 98.44 pct identical to residues 1 to 129 of 129 from Escherichia coli K-12 : B0099; prefers dGTP, causes AT-GC transversions NP_835838.1 residues 1 to 44 of 44 are 97.72 pct identical to residues 1 to 44 of 44 from Escherichia coli K-12 : B0100 NP_835839.1 residues 1 to 65 of 65 are 100.00 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 : B0101 NP_835840.1 residues 1 to 247 of 247 are 93.52 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B0102 NP_835841.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis NP_835842.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate NP_835843.1 residues 1 to 35 of 35 are 97.14 pct identical to residues 1 to 35 of 35 from Escherichia coli K-12 : B0105 NP_835844.1 residues 1 to 400 of 400 are 85.50 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B0106; involved in biogenesis of fimbriae, protein transport, DNA uptake NP_835845.1 residues 1 to 146 of 146 are 91.09 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B0108 NP_835846.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide NP_835847.1 residues 1 to 183 of 183 are 97.81 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B0110; regulates ampC NP_835848.1 involved in regulation of beta-lactamase; signaling protein NP_835849.1 residues 1 to 457 of 457 are 93.65 pct identical to residues 1 to 457 of 457 from Escherichia coli K-12 : B0112 NP_835850.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex NP_835851.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC NP_835852.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains NP_835853.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide NP_835854.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate NP_835855.2 residues 1 to 136 of 136 are 98.52 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B0119 NP_835856.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine NP_835857.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine NP_835858.1 residues 1 to 156 of 156 are 98.71 pct identical to residues 1 to 156 of 156 from Escherichia coli K-12 : B0122 NP_835859.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification NP_835860.1 residues 1 to 796 of 796 are 93.09 pct identical to residues 1 to 796 of 796 from Escherichia coli K-12 : B0124 NP_835861.2 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively NP_835862.1 catalyzes the interconversion of bicarbonate and carbon dioxide NP_835863.1 residues 1 to 308 of 308 are 99.67 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B0127 NP_835864.1 residues 1 to 256 of 256 are 89.06 pct identical to residues 1 to 256 of 256 from Escherichia coli K-12 : B0128 NP_835865.1 residues 1 to 146 of 146 are 98.63 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B0129 NP_835866.1 residues 1 to 409 of 409 are 97.79 pct identical to residues 1 to 409 of 409 from Escherichia coli K-12 : B0130 NP_835867.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) NP_835868.1 residues 1 to 300 of 300 are 92.66 pct identical to residues 1 to 300 of 300 from Escherichia coli K-12 : B0132 NP_835869.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine NP_835870.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate NP_835871.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_835872.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_835873.1 catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP NP_835874.2 Polymerase that creates the 3' poly(A) tail found in some mRNA's NP_835875.2 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu NP_835876.1 residues 1 to 151 of 151 are 90.06 pct identical to residues 1 to 151 of 151 from Escherichia coli K-12 : B0145 NP_835877.1 Regulatory factor involved in maltose metabolism NP_835878.1 residues 1 to 179 of 179 are 99.44 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B0147 NP_835879.1 similar in sequence to the ATP-dependent RNA helicase HrpA NP_835880.1 bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell NP_835881.1 involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein NP_835882.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter NP_835883.1 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores NP_835884.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome NP_835885.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway NP_835886.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation NP_835887.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors NP_835888.1 residues 1 to 207 of 207 are 85.99 pct identical to residues 1 to 207 of 207 from Escherichia coli K-12 : B0157 NP_835889.1 solute binding component of the vitamin B12 transport system BtuCDF NP_835890.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine NP_835891.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate NP_835892.1 protease Do; required at high temperature; degrades damaged proteins NP_835893.1 residues 1 to 128 of 128 are 100.00 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B0163 NP_835894.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway NP_835895.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein NP_835896.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn NP_835897.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit NP_835898.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu NP_835899.1 Catalyzes the phosphorylation of UMP to UDP NP_835900.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs NP_835901.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate NP_835902.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate NP_835903.2 catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate NP_835904.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response NP_835905.1 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins NP_835906.1 residues 1 to 161 of 161 are 89.44 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B0178; located in outer membrane or nucleoid NP_835907.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis NP_835908.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP NP_835909.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis NP_835910.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM NP_835911.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids NP_835912.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase NP_835913.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein NP_835914.1 residues 1 to 713 of 713 are 99.15 pct identical to residues 1 to 713 of 713 from Escherichia coli K-12 : B0186 NP_835915.2 residues 1 to 138 of 138 are 89.13 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B0187 NP_835916.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase NP_835917.1 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination NP_835918.1 residues 1 to 181 of 181 are 100.00 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B0190 NP_835919.1 residues 1 to 140 of 140 are 97.14 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 : B0191 NP_835920.1 residues 1 to 236 of 236 are 98.30 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B0192 NP_835921.1 residues 1 to 274 of 274 are 94.89 pct identical to residues 19 to 292 of 292 from Escherichia coli K-12 : B0193 NP_835922.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) NP_835923.1 residues 1 to 235 of 235 are 92.76 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0195 NP_835924.1 residues 1 to 134 of 134 are 85.82 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B0196; involved in colanic acid synthesis; interacts with RcsB NP_835925.1 residues 1 to 271 of 271 are 94.83 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 : B0197 NP_835926.1 part of the MetNIQ methionine uptake system NP_835927.1 part of the metNIQ transport system for methionine NP_835928.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate NP_835929.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid NP_835930.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_835931.1 residues 1 to 301 of 304 are 98.67 pct identical to residues 1 to 301 of 304 from Escherichia coli K-12 : B0208 NP_835932.1 residues 1 to 266 of 266 are 100.00 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B0209 NP_835933.1 residues 2 to 206 of 206 are 93.65 pct identical to residues 3 to 207 of 207 from Escherichia coli K-12 : B0210 NP_835934.1 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall NP_835935.1 catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione; plays an important role in cellular detoxification using glutathione NP_835936.1 residues 1 to 246 of 246 are 98.37 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B0213 NP_835937.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids NP_835938.1 3'-5' exonuclease of DNA polymerase III NP_835939.1 residues 1 to 348 of 348 are 68.66 pct identical to residues 1 to 351 of 351 from GenPept : >gb|AAL19222.1| (AE008707) cytoplasmic protein [Salmonella typhimurium LT2] NP_835940.1 residues 1 to 37 of 37 are 86.48 pct identical to residues 154 to 190 of 331 from GenPept : >gb|AAL19223.1| (AE008707) cytoplasmic protein [Salmonella typhimurium LT2] NP_835941.1 residues 1 to 100 of 101 are 79.00 pct identical to residues 1 to 100 of 331 from GenPept : >gb|AAL19223.1| (AE008707) cytoplasmic protein [Salmonella typhimurium LT2] NP_835942.1 residues 1 to 627 of 627 are 91.54 pct identical to residues 1 to 627 of 627 from GenPept : >gb|AAL19224.1| (AE008707) cytoplasmic protein [Salmonella typhimurium LT2] NP_835943.1 residues 1 to 164 of 164 are 78.65 pct identical to residues 1 to 164 of 164 from GenPept : >emb|CAD08723.1| (AL627266) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_835944.1 residues 1 to 210 of 210 are 69.99 pct identical to residues 1 to 208 of 274 from GenPept : >gb|AAL19226.1| (AE008707) cytoplasmic protein [Salmonella typhimurium LT2] NP_835945.1 residues 6 to 124 of 125 are 56.66 pct identical to residues 180 to 299 of 300 from GenPept : >gb|AAL19227.1| (AE008707) cytoplasmic protein [Salmonella typhimurium LT2] NP_835946.1 residues 7 to 99 of 99 are 61.29 pct identical to residues 6 to 97 of 300 from GenPept : >gb|AAL19227.1| (AE008707) cytoplasmic protein [Salmonella typhimurium LT2] NP_835947.1 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_835948.1 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_835949.1 residues 1 to 100 of 100 are 99.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_835950.1 residues 19 to 297 of 297 are 99.28 pct identical to residues 1 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a] NP_835952.1 residues 1 to 89 of 89 are 96.62 pct identical to residues 89 to 177 of 177 from GenPept : >gb|AAC74627.1| (AE000252) lysozyme [Escherichia coli K12] NP_835953.1 residues 1 to 99 of 104 are 64.64 pct identical to residues 1 to 93 of 103 from GenPept : >gb|AAC74628.1| (AE000252) orf, hypothetical protein [Escherichia coli K12] NP_835954.1 residues 1 to 71 of 71 are 97.18 pct identical to residues 1 to 71 of 71 from GenPept : >gb|AAA32349.1| (M65239) S [Bacteriophage 21] NP_835955.1 no significant similarities NP_835956.1 residues 7 to 126 of 135 are 29.83 pct identical to residues 203 to 324 of 327 from GenPept : >emb|CAD02863.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_835957.1 residues 72 to 350 of 350 are 99.64 pct identical to residues 1 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a] NP_835958.1 residues 19 to 297 of 297 are 99.64 pct identical to residues 1 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a] NP_835959.1 residues 1 to 184 of 186 are 89.67 pct identical to residues 200 to 383 of 499 from GenPept : >gb|AAF75044.1| (AF217253) terminase large subunit [Enterobacteria phage P22] NP_835960.1 residues 7 to 99 of 124 are 82.79 pct identical to residues 382 to 474 of 499 from GenPept : >gb|AAF75044.1| (AF217253) terminase large subunit [Enterobacteria phage P22] NP_835961.1 residues 1 to 721 of 721 are 72.48 pct identical to residues 1 to 725 of 725 from GenPept : >gb|AAF75045.1| (AF217253) portal protein [Enterobacteria phage P22] NP_835962.1 residues 1 to 303 of 303 are 79.27 pct identical to residues 1 to 303 of 303 from GenPept : >gb|AAF75046.1| (AF217253) scaffolding protein [Enterobacteria phage P22] NP_835963.1 residues 1 to 431 of 431 are 72.62 pct identical to residues 1 to 430 of 430 from GenPept : >gb|AAF75047.1| (AF217253) coat protein [Enterobacteria phage P22] NP_835964.1 no significant similarities NP_835965.1 residues 1 to 163 of 166 are 60.12 pct identical to residues 1 to 157 of 166 from GenPept : >gb|AAF75049.1| (AF217253) DNA stabilization protein [Enterobacteria phage P22] NP_835966.1 residues 1 to 472 of 472 are 98.72 pct identical to residues 1 to 472 of 472 from GenPept : >gb|AAK28897.1|AF335538_49 (AF335538) DNA stabilization protein [Bacteriophage HK620] NP_835967.1 residues 96 to 282 of 282 are 87.16 pct identical to residues 3 to 189 of 189 from GenPept : >gb|AAG57480.1|AE005466_10 (AE005466) Z3617 gene product [Escherichia coli O157:H7 EDL933] NP_835968.1 residues 1 to 151 of 151 are 98.67 pct identical to residues 1 to 151 of 151 from GenPept : >gb|AAK28899.1|AF335538_51 (AF335538) head assembly protein [Bacteriophage HK620] NP_835969.1 residues 1 to 230 of 230 are 52.60 pct identical to residues 1 to 230 of 230 from GenPept : >gb|AAK28900.1|AF335538_52 (AF335538) DNA transfer protein [Bacteriophage HK620] NP_835970.1 residues 1 to 216 of 443 are 57.79 pct identical to residues 1 to 215 of 378 from GenPept : >gb|AAG57477.1|AE005466_7 (AE005466) prophage DNA injection protein [Escherichia coli O157:H7 EDL933] NP_835971.1 residues 217 to 348 of 576 are 76.35 pct identical to residues 60 to 207 of 722 from GenPept : >gb|AAK28902.1|AF335538_54 (AF335538) DNA transfer protein [Bacteriophage HK620] NP_835972.1 residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_835973.1 residues 1 to 215 of 215 are 98.13 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a] NP_835974.1 residues 1 to 112 of 112 are 83.92 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 : B0384 NP_835975.1 residues 1 to 487 of 487 are 96.71 pct identical to residues 8 to 494 of 494 from Escherichia coli K-12 : B0383 NP_835976.1 residues 1 to 86 of 86 are 98.83 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B0382 NP_835977.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli NP_835978.1 residues 1 to 114 of 114 are 97.36 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 : B0380 NP_835979.1 residues 1 to 102 of 102 are 99.01 pct identical to residues 1 to 102 of 102 from Escherichia coli K-12 : B0379 NP_835980.1 residues 1 to 364 of 364 are 95.05 pct identical to residues 1 to 364 of 364 from Escherichia coli K-12 : B0378 NP_835981.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope NP_835982.1 this protein has no known enzymatic function NP_835983.1 residues 1 to 270 of 270 are 95.92 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445) transposase B [Pantoea agglomerans] NP_835984.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_835985.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_835986.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_835987.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_835988.1 residues 1 to 89 of 89 are 80.89 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B0370 NP_835989.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_835990.1 catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers NP_835991.1 residues 1 to 275 of 275 are 90.54 pct identical to residues 1 to 275 of 275 from Escherichia coli K-12 : B0367 NP_835992.1 Part of the ABC transporter complex tauABC involved in taurine import NP_835993.1 with TauB and TauC is responsible for taurine uptake. NP_835994.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_835995.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_835996.1 residues 1 to 222 of 222 are 97.29 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B0310 NP_835997.1 residues 1 to 70 of 70 are 72.85 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B0309 NP_835998.2 residues 1 to 280 of 280 are 94.64 pct identical to residues 3 to 282 of 282 from Escherichia coli K-12 : B0308 NP_835999.1 residues 1 to 475 of 475 are 99.36 pct identical to residues 1 to 475 of 475 from Escherichia coli K-12 : B0307 NP_836000.1 residues 1 to 239 of 239 are 98.74 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B0306 NP_836001.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836002.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_836003.1 residues 1 to 734 of 737 are 80.92 pct identical to residues 1 to 729 of 729 from GenPept : >emb|CAD08749.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836004.1 residues 5 to 64 of 66 are 78.33 pct identical to residues 5 to 64 of 148 from GenPept : >gb|AAL19247.1| (AE008708) cytoplasmic protein [Salmonella typhimurium LT2] NP_836005.1 residues 1 to 62 of 62 are 67.74 pct identical to residues 86 to 147 of 148 from GenPept : >gb|AAL19247.1| (AE008708) cytoplasmic protein [Salmonella typhimurium LT2] NP_836006.1 residues 1 to 127 of 135 are 68.50 pct identical to residues 1 to 127 of 1354 from GenPept : >emb|CAD08751.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836007.1 residues 1 to 759 of 762 are 69.22 pct identical to residues 137 to 954 of 1364 from GenPept : >gb|AAL19248.1| (AE008708) RHS-family protein [Salmonella typhimurium LT2] NP_836008.1 residues 1 to 291 of 329 are 78.76 pct identical to residues 961 to 1252 of 1354 from GenPept : >emb|CAD08751.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836009.1 residues 1 to 256 of 256 are 98.04 pct identical to residues 1 to 256 of 256 from Escherichia coli K-12 : B0219 NP_836010.1 inactivates vertebrate C-type lysozyme NP_836011.2 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA NP_836012.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate NP_836013.1 residues 1 to 255 of 255 are 99.60 pct identical to residues 1 to 255 of 255 from Escherichia coli K-12 : B0223 NP_836014.1 residues 1 to 246 of 246 are 99.59 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B0224 NP_836015.1 residues 10 to 184 of 184 are 96.57 pct identical to residues 75 to 249 of 249 from Escherichia coli K-12 : B0227 NP_836016.1 residues 1 to 164 of 165 are 94.51 pct identical to residues 1 to 164 of 165 from Escherichia coli K-12 : B0228 NP_836017.1 residues 1 to 579 of 579 are 89.81 pct identical to residues 1 to 579 of 579 from Escherichia coli K-12 : B0229 NP_836018.1 residues 1 to 261 of 261 are 98.46 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 : B0230 NP_836019.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function NP_836020.1 residues 1 to 97 of 97 are 98.96 pct identical to residues 1 to 97 of 97 from Escherichia coli K-12 : B0232 NP_836021.1 YafO overproduction induces toxicity; it is believed to be the toxin of a toxin-antitoxin pair; unknown function NP_836022.1 residues 1 to 150 of 150 are 91.33 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 : B0234 NP_836023.1 mutations in this gene result in a compromised ability for drug-inducible mexXY expression; expression is inducible by the same ribosome-targeting agents that induce mexXY NP_836024.1 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA NP_836025.1 residues 1 to 485 of 485 are 96.08 pct identical to residues 1 to 485 of 485 from Escherichia coli K-12 : B0237 NP_836026.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively NP_836027.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation NP_836028.1 involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS NP_836029.1 residues 1 to 351 of 351 are 99.71 pct identical to residues 1 to 351 of 351 from Escherichia coli K-12 : B0241 NP_836030.1 residues 1 to 91 of 91 are 97.80 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836031.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836032.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis NP_836033.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway NP_836034.1 residues 1 to 387 of 387 are 98.19 pct identical to residues 1 to 387 of 387 from GenPept : >gb|AAB72135.1| (U82619) integrase [Shigella flexneri bacteriophage V] NP_836035.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_836036.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_836037.1 residues 1 to 216 of 216 are 90.74 pct identical to residues 1 to 216 of 216 from GenPept : >gb|AAB72130.2| (U82619) unknown [Shigella flexneri bacteriophage V] NP_836038.1 residues 1 to 138 of 153 are 95.65 pct identical to residues 1 to 138 of 167 from Genpept : >gb|AAF09028.1| (AF139596) unknown [Shigella flexneri] NP_836039.1 residues 17 to 137 of 349 are 28.12 pct identical to residues 7 to 129 of 337 from Genpept : >gb|AAK80982.1|AE007801_6 (AE007801) O-actetyl transferase related protein [Clostridium acetobutylicum] NP_836040.1 residues 1 to 406 of 406 are 62.62 pct identical to residues 4 to 407 of 407 from NRprotein_Feb03 : >ref|NP_085189.1| IS10 orf [Shigella flexneri] gb|AAK18345.1|AF348706_34 IS10 orf [Shigella flexneri] gb|AAL72480.1| hypothetical protein [Shigella flexneri 2a] NP_836041.1 residues 1 to 486 of 486 are 81.68 pct identical to residues 1 to 486 of 486 from Genpept : >gb|AAC39273.1| (AF021347) glucosyl tranferase II [bacteriophage SfII] NP_836042.1 residues 1 to 309 of 309 are 94.82 pct identical to residues 1 to 309 of 309 from GenPept : >gb|AAC39272.1| (AF021347) bactoprenol glucosyl transferase [bacteriophage SfII] NP_836043.1 residues 1 to 120 of 120 are 89.99 pct identical to residues 1 to 120 of 120 from GenPept : >gb|AAB72134.1| (U82619) flippase [Shigella flexneri bacteriophage V] NP_836044.1 residues 1 to 97 of 97 are 100.00 pct identical to residues 290 to 386 of 386 from GenPept : >gb|AAD10295.1| (U82084) integrase [bacteriophage SfX] NP_836045.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_836046.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836047.1 residues 1 to 387 of 387 are 98.96 pct identical to residues 1 to 387 of 387 from GenPept : >gb|AAB72135.1| (U82619) integrase [Shigella flexneri bacteriophage V] NP_836048.1 residues 39 to 379 of 390 are 28.05 pct identical to residues 15 to 359 of 397 from Genpept : >dbj|BAB50097.1| (AP003001) contains weak similarity to acetyltransferase [Mesorhizobium loti] NP_836049.1 residues 1 to 146 of 146 are 99.31 pct identical to residues 127 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_836050.1 residues 1 to 206 of 206 are 100.00 pct identical to residues 1 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri] NP_836051.1 residues 1 to 71 of 72 are 84.50 pct identical to residues 1 to 71 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836052.1 catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis NP_836053.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate NP_836054.2 residues 1 to 192 of 192 are 93.22 pct identical to residues 1 to 192 of 192 from Escherichia coli K-12 : B0387 NP_836055.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis NP_836056.1 residues 1 to 63 of 63 are 100.00 pct identical to residues 1 to 63 of 63 from Escherichia coli K-12 : B0389 NP_836057.1 residues 1 to 225 of 225 are 100.00 pct identical to residues 1 to 225 of 225 from Escherichia coli K-12 : B0390; regulated by aroR NP_836058.1 residues 1 to 94 of 94 are 100.00 pct identical to residues 1 to 94 of 94 from Escherichia coli K-12 : B0391 NP_836059.1 residues 1 to 93 of 93 are 97.84 pct identical to residues 1 to 93 of 93 from Escherichia coli K-12 : B0392 NP_836060.1 ORF2; residues 1 to 144 of 151 are 99.30 pct identical to residues 1 to 144 of 149 from GenPept : >gb|AAG54739.1|AE005218_4 (AE005218) Z0491 gene product [Escherichia coli O157:H7 EDL933] NP_836061.1 Required for efficient pilin antigenic variation NP_836062.2 catalyzes phosphorylation of fructose; cytosolic enzyme NP_836063.1 member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers NP_836064.1 with SbcD cleaves DNA hairpin structures; also has 5' single-strand endonuclease activity NP_836065.1 with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity NP_836066.1 two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB NP_836067.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB NP_836068.1 residues 1 to 439 of 439 are 93.39 pct identical to residues 1 to 439 of 439 from Escherichia coli K-12 : B0401 NP_836069.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation NP_836070.1 residues 1 to 605 of 605 are 98.84 pct identical to residues 1 to 605 of 605 from Escherichia coli K-12 : B0403 NP_836071.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step NP_836072.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) NP_836073.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex NP_836074.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane NP_836075.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF NP_836076.1 residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from Escherichia coli K-12 : B0410 NP_836077.1 residues 1 to 294 of 294 are 95.57 pct identical to residues 1 to 294 of 294 from Escherichia coli K-12 : B0411; receptor of phage t6 and colicin K NP_836078.2 residues 1 to 199 of 199 are 93.96 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B0412 NP_836079.1 residues 1 to 149 of 149 are 99.32 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B0413 NP_836080.1 riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil NP_836081.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not NP_836082.1 Regulates rRNA biosynthesis by transcriptional antitermination NP_836083.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP NP_836084.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate NP_836085.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate NP_836086.1 residues 1 to 299 of 299 are 95.98 pct identical to residues 1 to 299 of 299 from Escherichia coli K-12 : B0421 NP_836087.1 catalyzes the bidirectional exonucleolytic cleavage of DNA NP_836088.1 Required for the synthesis of the thiazole moiety NP_836089.1 residues 1 to 198 of 198 are 97.97 pct identical to residues 1 to 198 of 198 from Escherichia coli K-12 : B0424 NP_836090.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis NP_836091.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription NP_836092.1 residues 1 to 575 of 576 are 48.69 pct identical to residues 1 to 575 of 576 from NRprotein_Feb03 : >ref|NP_460955.1| periplasmic protein [Salmonella typhimurium LT2] gb|AAL20914.1| periplasmic protein [Salmonella typhimurium LT2] NP_836093.1 residues 1 to 713 of 717 are 51.59 pct identical to residues 1 to 717 of 720 from NRprotein_Feb03 : >ref|NP_405544.1| exported protein [Yersinia pestis] ref|NP_669630.1| hypothetical [Yersinia pestis KIM] pir||AF0242 probable exported protein YPO1989 [imported] - Yersinia pestis (strain CO92) emb|CAC90802.1 NP_836094.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836095.1 residues 7 to 103 of 103 are 100.00 pct identical to residues 71 to 167 of 167 from NRprotein_Feb03 : >ref|NP_085209.1| IS1 transposase [Shigella flexneri] ref|NP_706317.1| IS1 transposase [Shigella flexneri 2a str. 301] ref|NP_707672.1| IS1 transposase [Shigella flexneri 2a str. 301] ref|NP_707862.1| IS1 transposase [Shigella flexneri 2a str. 301] ref|NP_708570.1| IS1 transposase [Shigella flexneri NP_836096.1 residues 1 to 79 of 79 are 100.00 pct identical to residues 54 to 132 of 132 from NRprotein_Feb03 : >ref|NP_706318.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN42025.1|AE015069_8 orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] NP_836097.1 ORF2; residues 15 to 95 of 103 are 35.80 pct identical to residues 10 to 90 of 95 from GenPept : >dbj|BAA84915.1| (AB024946) orf80 [Escherichia coli] NP_836098.1 converts protoheme IX and farnesyl diphosphate to heme O NP_836099.1 residues 1 to 109 of 109 are 100.00 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B0429 NP_836100.1 residues 25 to 204 of 204 are 100.00 pct identical to residues 25 to 204 of 204 from Escherichia coli K-12 : B0430 NP_836101.1 residues 1 to 349 of 349 are 99.71 pct identical to residues 2 to 350 of 350 from GenPept : >gb|AAK18526.1|AF348706_215 (AF348706) IS orf [Shigella flexneri] NP_836102.2 residues 1 to 59 of 62 are 88.13 pct identical to residues 273 to 331 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_836103.1 residues 1 to 36 of 44 are 100.00 pct identical to residues 1 to 36 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_836104.1 residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from GenPept : >gb|AAL72465.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836105.1 residues 1 to 165 of 165 are 98.78 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836106.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein NP_836107.2 residues 1 to 226 of 226 are 93.80 pct identical to residues 1 to 226 of 226 from Escherichia coli K-12 : B0434 NP_836108.2 positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress NP_836109.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer NP_836110.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_836111.1 binds and unfolds substrates as part of the ClpXP protease NP_836112.1 residues 1 to 784 of 784 are 97.83 pct identical to residues 1 to 784 of 784 from Escherichia coli K-12 : B0439 NP_836113.1 histone-like DNA-binding protein NP_836114.1 residues 1 to 623 of 623 are 96.95 pct identical to residues 1 to 623 of 623 from Escherichia coli K-12 : B0441 NP_836115.1 residues 1 to 123 of 123 are 85.36 pct identical to residues 1 to 123 of 123 from Escherichia coli K-12 : B0442 NP_836116.1 residues 1 to 132 of 132 are 89.39 pct identical to residues 1 to 132 of 132 from Escherichia coli K-12 : B0443 NP_836117.1 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His NP_836118.1 residues 1 to 276 of 276 are 98.18 pct identical to residues 1 to 276 of 276 from Escherichia coli K-12 : B0446 NP_836119.1 residues 1 to 181 of 181 are 98.34 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B0447 NP_836120.1 residues 1 to 590 of 590 are 96.61 pct identical to residues 1 to 590 of 590 from Escherichia coli K-12 : B0448 NP_836121.1 residues 1 to 593 of 593 are 91.73 pct identical to residues 1 to 593 of 593 from Escherichia coli K-12 : B0449 NP_836122.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia. NP_836123.1 residues 1 to 428 of 428 are 82.94 pct identical to residues 1 to 428 of 428 from Escherichia coli K-12 : B0451 NP_836124.1 residues 1 to 286 of 286 are 96.15 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B0452 NP_836125.1 residues 1 to 190 of 190 are 75.26 pct identical to residues 1 to 190 of 190 from Escherichia coli K-12 : B0453; involved in glycoprotein/polysaccharide metabolism NP_836126.1 residues 1 to 442 of 442 are 99.32 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_836127.1 residues 1 to 103 of 103 are 100.00 pct identical to residues 27 to 129 of 129 from Escherichia coli K-12 : B0454 NP_836128.1 residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B0456 NP_836129.1 residues 1 to 516 of 516 are 94.37 pct identical to residues 3 to 518 of 518 from Escherichia coli K-12 : B0457 NP_836130.1 residues 1 to 156 of 156 are 100.00 pct identical to residues 14 to 169 of 169 from Escherichia coli K-12 : B0458 NP_836131.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins NP_836132.1 residues 1 to 124 of 124 are 99.19 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B0461 NP_836133.1 residues 1 to 1049 of 1049 are 94.47 pct identical to residues 1 to 1049 of 1049 from Escherichia coli K-12 : B0462 NP_836134.1 residues 1 to 397 of 397 are 90.17 pct identical to residues 1 to 397 of 397 from Escherichia coli K-12 : B0463 NP_836135.1 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine NP_836136.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS NP_836137.1 residues 1 to 53 of 53 are 98.11 pct identical to residues 1 to 53 of 53 from Escherichia coli K-12 : B0466 NP_836138.1 PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulates Rep activity at stalled forks NP_836139.1 residues 1 to 125 of 125 are 86.40 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B0468 NP_836140.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis NP_836141.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA NP_836142.1 residues 1 to 109 of 109 are 70.64 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B0471 NP_836143.1 involved in a recombinational process of DNA repair, independent of the recBC complex NP_836144.1 molecular chaperone NP_836145.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP NP_836146.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic NP_836147.1 residues 1 to 272 of 272 are 92.64 pct identical to residues 1 to 272 of 319 from Escherichia coli K-12 : B0476 NP_836148.1 residues 1 to 434 of 434 are 96.77 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B0477 NP_836149.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein NP_836150.1 residues 1 to 406 of 406 are 77.83 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B0479 NP_836151.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides NP_836152.1 residues 1 to 159 of 159 are 91.82 pct identical to residues 1 to 159 of 159 from Escherichia coli K-12 : B0481 NP_836153.1 residues 1 to 264 of 264 are 100.00 pct identical to residues 1 to 264 of 264 from Escherichia coli K-12 : B0482 NP_836154.1 residues 1 to 131 of 131 are 97.70 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B0483 NP_836155.1 residues 1 to 834 of 834 are 93.64 pct identical to residues 1 to 834 of 834 from Escherichia coli K-12 : B0484 NP_836156.1 catalyzes the formation of glutamate from glutamine NP_836157.1 residues 1 to 430 of 430 are 86.51 pct identical to residues 1 to 430 of 430 from Escherichia coli K-12 : B0486 NP_836158.1 activator of copper-responsive regulon genes NP_836159.1 residues 1 to 151 of 151 are 81.45 pct identical to residues 1 to 151 of 151 from Escherichia coli K-12 : B0488 NP_836160.1 residues 1 to 305 of 305 are 95.40 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 : B0489 NP_836161.1 residues 1 to 225 of 225 are 98.66 pct identical to residues 1 to 225 of 225 from Escherichia coli K-12 : B0490 NP_836162.1 residues 1 to 268 of 268 are 89.55 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B0491 NP_836163.1 residues 1 to 296 of 296 are 95.60 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B0492 NP_836164.1 residues 1 to 269 of 269 are 98.51 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 : B0493 NP_836165.1 residues 1 to 228 of 228 are 100.00 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B0495 NP_836166.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA NP_836167.1 activator of the allDC-ylbA operon involved in allantoin utilization NP_836168.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate NP_836169.1 regulates operons involved in the utilization of allantoin NP_836170.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate NP_836171.1 residues 1 to 93 of 93 are 97.84 pct identical to residues 1 to 93 of 258 from Escherichia coli K-12 : B0508 NP_836172.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_836173.1 residues 1 to 91 of 91 are 97.80 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836174.1 residues 1 to 217 of 223 are 91.70 pct identical to residues 1 to 217 of 261 from Escherichia coli K-12 : B0515 NP_836175.2 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide NP_836176.1 forms a homodimer; may be used to synthesize carbomyl phosphate from ATP and carbamate NP_836177.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway NP_836178.1 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway NP_836179.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine NP_836180.1 residues 1 to 164 of 164 are 99.39 pct identical to residues 1 to 164 of 164 from Escherichia coli K-12 : B0525 NP_836181.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA NP_836182.1 residues 1 to 149 of 169 are 85.62 pct identical to residues 1 to 153 of 173 from Escherichia coli K-12 : B0527 NP_836183.2 residues 1 to 77 of 77 are 98.70 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 : B0528 NP_836184.1 residues 1 to 288 of 288 are 99.30 pct identical to residues 1 to 288 of 288 from Escherichia coli K-12 : B0529 NP_836185.1 residues 1 to 191 of 191 are 90.57 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B0530 NP_836186.1 residues 13 to 230 of 230 are 90.82 pct identical to residues 13 to 230 of 230 from Escherichia coli K-12 : B0531 NP_836187.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_836188.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836189.1 residues 1 to 253 of 253 are 92.09 pct identical to residues 1 to 253 of 253 from Escherichia coli K-12 : B0566; involved in thermoregulation of porin biosynthesis NP_836190.1 residues 1 to 296 of 296 are 93.24 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B0567 NP_836191.1 residues 1 to 480 of 480 are 88.95 pct identical to residues 1 to 480 of 480 from Escherichia coli K-12 : B0570 NP_836192.1 response regulator in two-component regulatory system with CusS; regulates the copper efflux system NP_836193.1 with CusA, CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver NP_836194.1 residues 1 to 110 of 110 are 99.09 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B0573 NP_836195.1 residues 3 to 104 of 107 are 42.85 pct identical to residues 16 to 120 of 409 from GenPept : >gb|AAF28112.1|AF153317_4 (AF153317) integrase [Shigella dysenteriae] NP_836196.1 residues 1 to 206 of 206 are 100.00 pct identical to residues 1 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri]; partial NP_836197.1 residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836198.1 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_836199.1 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_836200.1 residues 1 to 1046 of 1047 are 96.36 pct identical to residues 1 to 1046 of 1047 from Escherichia coli K-12 : B0575 NP_836201.1 residues 1 to 458 of 458 are 89.95 pct identical to residues 1 to 458 of 458 from Escherichia coli K-12 : B0576 NP_836202.1 residues 1 to 415 of 415 are 97.10 pct identical to residues 1 to 415 of 415 from Escherichia coli K-12 : B0577 NP_836203.1 catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive NP_836204.1 residues 1 to 122 of 122 are 99.18 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B0579 NP_836205.1 residues 1 to 82 of 82 are 78.04 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B0580 NP_836206.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity NP_836207.1 residues 1 to 173 of 173 are 100.00 pct identical to residues 1 to 173 of 173 from GenPept : >gb|AAB18534.1| (U00039) orfA in IS150 [Escherichia coli] NP_836208.1 residues 1 to 117 of 143 are 99.14 pct identical to residues 1 to 117 of 283 from GenPept : >gb|AAB18535.2| (U00039) orfB in IS150 [Escherichia coli] NP_836209.1 residues 1 to 50 of 50 are 95.99 pct identical to residues 34 to 83 of 83 from GenPept : >gb|AAG54916.1|AE005238_2 (AE005238) Z0722 gene product [Escherichia coli O157:H7 EDL933] NP_836210.1 residues 1 to 83 of 83 are 97.59 pct identical to residues 1 to 83 of 83 from GenPept : >gb|AAG54916.1|AE005238_2 (AE005238) Z0722 gene product [Escherichia coli O157:H7 EDL933] NP_836211.1 residues 1 to 209 of 209 are 87.55 pct identical to residues 1 to 209 of 209 from Escherichia coli K-12 : B0583 NP_836212.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space NP_836213.1 residues 27 to 400 of 400 are 98.12 pct identical to residues 1 to 374 of 374 from Escherichia coli K-12 : B0585 NP_836214.1 with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin NP_836215.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836216.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836217.1 with FepBDE is involved in the transport of ferric enterobactin NP_836218.1 with FepBCD is involved in the transport of ferric enterobactin NP_836219.1 with FepBCG is involved in the transport of ferric enterobactin NP_836220.1 protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters NP_836221.1 with FepCDG is involved in the transport of ferric enterobactin NP_836222.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate NP_836223.1 residues 1 to 285 of 285 are 99.64 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B0595 NP_836224.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin NP_836225.1 residues 1 to 137 of 137 are 90.51 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 : B0597 NP_836226.1 residues 1 to 701 of 701 are 90.58 pct identical to residues 1 to 701 of 701 from Escherichia coli K-12 : B0598 NP_836227.1 member of the iron-containing alcohol dehydrogenase family; unknown function NP_836228.1 catalyzes the transfer of an amino moiety NP_836229.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_836230.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836231.1 residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445) transposase A [Pantoea agglomerans] NP_836232.1 residues 1 to 270 of 270 are 95.92 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445) transposase B [Pantoea agglomerans] NP_836233.2 Involved in disulfide bond formation NP_836234.1 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate NP_836235.1 residues 1 to 531 of 531 are 95.29 pct identical to residues 1 to 531 of 531 from Escherichia coli K-12 : B0606; involved in detoxification of hydroperoxides NP_836236.1 residues 1 to 142 of 142 are 98.59 pct identical to residues 1 to 142 of 142 from Escherichia coli K-12 : B0607 NP_836237.1 residues 1 to 412 of 412 are 98.78 pct identical to residues 1 to 412 of 412 from Escherichia coli K-12 : B0608 NP_836238.1 residues 1 to 147 of 147 are 100.00 pct identical to residues 7 to 153 of 153 from Escherichia coli K-12 : B0609 NP_836239.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation NP_836240.1 residues 7 to 274 of 274 are 91.79 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B0611; cleaves phosphodiester bond between any two nucleotides NP_836241.1 catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA NP_836242.1 2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate NP_836243.1 residues 1 to 510 of 510 are 99.01 pct identical to residues 1 to 510 of 510 from Escherichia coli K-12 : B0615 NP_836244.1 residues 1 to 302 of 302 are 95.36 pct identical to residues 6 to 307 of 307 from Escherichia coli K-12 : B0616 NP_836245.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate NP_836246.1 residues 1 to 381 of 381 are 99.47 pct identical to residues 1 to 381 of 381 from Escherichia coli K-12 : B0618 NP_836247.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836248.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836249.1 YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily NP_836250.1 Part of the ABC transporter complex modABC involved in molybdenum import NP_836251.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE NP_836252.1 with ModCB is involved in the high-affinity transport of molybdate NP_836253.1 residues 1 to 49 of 49 are 71.42 pct identical to residues 1 to 49 of 49 from Escherichia coli K-12 : B0762 NP_836254.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons NP_836255.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum NP_836256.1 residues 1 to 338 of 338 are 99.11 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 : B0759 NP_836257.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P NP_836258.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism NP_836259.1 catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose NP_836260.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate NP_836261.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive NP_836262.1 residues 1 to 126 of 126 are 65.07 pct identical to residues 1 to 126 of 126 from Escherichia coli K-12 : B0753 NP_836263.1 involved in zinc efflux across the cytoplasmic membrane NP_836264.1 residues 1 to 239 of 239 are 100.00 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B0751; required for NMN transport NP_836265.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate NP_836266.1 periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity NP_836267.1 residues 1 to 173 of 173 are 93.64 pct identical to residues 1 to 173 of 173 from Escherichia coli K-12 : B0741 NP_836268.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA NP_836269.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins NP_836270.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins NP_836271.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins NP_836272.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components NP_836273.1 residues 1 to 93 of 97 are 100.00 pct identical to residues 1 to 93 of 97 from Escherichia coli K-12 : B0735 NP_836274.1 residues 1 to 379 of 379 are 92.61 pct identical to residues 1 to 379 of 379 from Escherichia coli K-12 : B0734 NP_836275.1 residues 1 to 523 of 523 are 99.80 pct identical to residues 1 to 523 of 523 from Escherichia coli K-12 : B0733 NP_836276.1 residues 1 to 877 of 877 are 93.84 pct identical to residues 1 to 877 of 877 from Escherichia coli K-12 : B0732 NP_836277.1 involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake NP_836278.1 regulates the succiny-lCoA synthetase operon NP_836279.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle NP_836280.1 catalyzes the interconversion of succinyl-CoA and succinate NP_836281.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA NP_836282.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide NP_836283.1 residues 1 to 86 of 86 are 100.00 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B0725 NP_836284.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase NP_836285.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol NP_836286.1 residues 1 to 94 of 115 are 100.00 pct identical to residues 1 to 94 of 115 from Escherichia coli K-12 : B0722 NP_836287.2 residues 6 to 134 of 134 are 99.22 pct identical to residues 1 to 129 of 129 from Escherichia coli K-12 : B0721 NP_836288.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH NP_836289.1 residues 1 to 188 of 188 are 76.06 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B0719 NP_836290.1 residues 1 to 819 of 819 are 93.16 pct identical to residues 1 to 818 of 818 from Escherichia coli K-12 : B0718 NP_836291.1 residues 1 to 242 of 243 are 87.19 pct identical to residues 1 to 242 of 242 from Escherichia coli K-12 : B0717 NP_836292.1 residues 1 to 363 of 363 are 95.59 pct identical to residues 1 to 363 of 363 from Escherichia coli K-12 : B0715 NP_836293.1 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity NP_836294.1 residues 1 to 244 of 244 are 92.62 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B0713 NP_836295.1 residues 1 to 218 of 218 are 99.08 pct identical to residues 1 to 218 of 218 from Escherichia coli K-12 : B0711 NP_836296.1 residues 1 to 247 of 247 are 94.73 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B0710 NP_836297.1 residues 1 to 493 of 493 are 97.16 pct identical to residues 1 to 493 of 493 from Escherichia coli K-12 : B0709 NP_836298.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent NP_836299.1 residues 1 to 169 of 169 are 98.81 pct identical to residues 1 to 169 of 169 from Escherichia coli K-12 : B0707 NP_836300.1 no significant similarities NP_836301.1 residues 702 to 1008 of 1128 are 59.29 pct identical to residues 524 to 822 of 843 from GenPept : >emb|CAD08754.1| (AL627266) Rhs-family protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836302.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836303.1 residues 1 to 94 of 94 are 79.78 pct identical to residues 1 to 94 of 94 from GenPept : >gb|AAF70018.1|AF250878_179 (AF250878) IS1 transposase [Salmonella typhi] NP_836304.1 residues 1 to 68 of 68 are 100.00 pct identical to residues 1 to 68 of 68 from Escherichia coli K-12 : B0699 NP_836305.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions NP_836306.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex NP_836307.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system NP_836308.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate NP_836309.1 negative modulator of the initiation of chromosome replication NP_836310.1 residues 1 to 254 of 254 are 98.81 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 : B0686 NP_836311.1 residues 1 to 120 of 120 are 85.00 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B0685 NP_836312.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group NP_836313.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer NP_836314.1 residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B0682 NP_836315.1 residues 1 to 468 of 468 are 99.14 pct identical to residues 1 to 468 of 468 from Escherichia coli K-12 : B0681 NP_836316.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_836317.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_836318.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate NP_836319.1 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate NP_836320.1 residues 1 to 406 of 406 are 100.00 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B0676 NP_836321.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP NP_836322.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q NP_836323.1 residues 1 to 474 of 474 are 99.78 pct identical to residues 1 to 474 of 474 from Escherichia coli K-12 : B0661 NP_836324.1 residues 1 to 336 of 359 are 100.00 pct identical to residues 1 to 336 of 359 from Escherichia coli K-12 : B0660 NP_836325.1 residues 1 to 155 of 155 are 88.38 pct identical to residues 1 to 155 of 155 from Escherichia coli K-12 : B0659 NP_836326.1 residues 1 to 292 of 292 are 95.54 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B0658 NP_836327.1 Transfers the fatty acyl group on membrane lipoproteins NP_836328.1 residues 1 to 302 of 302 are 89.73 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B0655 NP_836329.1 residues 1 to 246 of 246 are 99.18 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B0654 NP_836330.1 residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 224 from Escherichia coli K-12 : B0653 NP_836331.1 residues 1 to 241 of 241 are 94.60 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B0652 NP_836332.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific NP_836333.1 residues 1 to 483 of 483 are 92.13 pct identical to residues 1 to 483 of 483 from Escherichia coli K-12 : B0649 NP_836334.1 residues 1 to 235 of 235 are 96.59 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0648 NP_836335.1 residues 1 to 184 of 184 are 97.28 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B0647 NP_836336.1 residues 1 to 475 of 475 are 93.68 pct identical to residues 1 to 475 of 475 from Escherichia coli K-12 : B0646; involved in polynucleotide modification NP_836337.1 residues 1 to 235 of 235 are 93.19 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0645 NP_836338.1 residues 1 to 327 of 327 are 96.63 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B0644 NP_836339.1 residues 1 to 160 of 160 are 97.50 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B0643 NP_836340.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase NP_836341.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane NP_836342.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA NP_836343.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria NP_836344.1 residues 1 to 203 of 203 are 96.55 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 : B0638 NP_836345.1 residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B0637 NP_836346.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA NP_836347.1 residues 1 to 633 of 633 are 99.68 pct identical to residues 1 to 633 of 633 from Escherichia coli K-12 : B0635; involved in cell elongation, ephase NP_836348.1 residues 1 to 370 of 370 are 80.81 pct identical to residues 1 to 370 of 370 from Escherichia coli K-12 : B0634; sensitiveto radiation and drugs NP_836349.1 residues 1 to 362 of 362 are 90.60 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 : B0633 NP_836350.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors NP_836351.1 residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from Escherichia coli K-12 : B0631 NP_836352.2 lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism NP_836353.1 residues 1 to 266 of 266 are 98.87 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B0629 NP_836354.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group NP_836355.1 TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes NP_836356.1 residues 1 to 187 of 187 are 94.11 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B0626 NP_836357.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling NP_836358.1 member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator NP_836359.1 catalyzes the transfer of palmitate to lipid A NP_836360.1 responsible for the transport of C4-dicarboxylates during anaerobic growth NP_836361.1 residues 20 to 169 of 169 are 35.08 pct identical to residues 4 to 174 of 174 from GenPept : >gb|AAF01132.1|AF083977_53 (AF083977) c-repressor [Enterobacteria phage Mu] NP_836362.1 residues 1 to 484 of 484 are 96.90 pct identical to residues 62 to 545 of 663 from GenPept : >gb|AAF01083.1|AF083977_2 (AF083977) A [Enterobacteria phage Mu] NP_836363.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836364.1 residues 1 to 237 of 237 are 99.57 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72454.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836365.1 residues 1 to 50 of 81 are 68.62 pct identical to residues 1 to 51 of 122 from GenPept : >emb|CAD05577.1| (AL627272) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836366.1 residues 1 to 313 of 313 are 97.76 pct identical to residues 1 to 313 of 313 from GenPept : >emb|CAD05445.1| (AL627268) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836367.1 residues 1 to 33 of 33 are 100.00 pct identical to residues 136 to 168 of 168 from GenPept : >emb|CAD05444.1| (AL627268) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836368.1 residues 1 to 116 of 118 are 100.00 pct identical to residues 1 to 116 of 168 from GenPept : >emb|CAD05444.1| (AL627268) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836369.1 residues 1 to 406 of 406 are 89.90 pct identical to residues 1 to 406 of 406 from GenPept : >emb|CAD05443.1| (AL627268) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836370.1 residues 2 to 141 of 152 are 86.42 pct identical to residues 29 to 168 of 176 from GenPept : >emb|CAD05581.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836371.1 residues 1 to 488 of 488 are 96.72 pct identical to residues 1 to 488 of 488 from GenPept : >emb|CAD05582.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836372.1 residues 1 to 77 of 77 are 81.81 pct identical to residues 391 to 467 of 467 from GenPept : >emb|CAD05583.1| (AL627272) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836373.1 residues 10 to 167 of 179 are 96.20 pct identical to residues 222 to 379 of 467 from GenPept : >emb|CAD05583.1| (AL627272) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836374.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_836375.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_836376.1 residues 2 to 203 of 207 are 99.50 pct identical to residues 22 to 223 of 467 from GenPept : >emb|CAD05583.1| (AL627272) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836377.1 residues 1 to 249 of 254 are 97.18 pct identical to residues 1 to 249 of 249 from GenPept : >emb|CAD05584.1| (AL627272) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836378.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_836379.1 partial NP_836380.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836381.1 residues 1 to 55 of 57 are 90.90 pct identical to residues 100 to 154 of 155 from GenPept : >gb|AAG55117.1|AE005256_8 (AE005256) endopeptidase Rz of prophage CP-933K [Escherichia coli O157:H7 EDL933]; partial NP_836382.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836383.1 partial NP_836384.1 residues 1 to 43 of 52 are 97.67 pct identical to residues 72 to 114 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_836385.1 residues 1 to 124 of 124 are 100.00 pct identical to residues 156 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_836386.1 residues 1 to 140 of 140 are 88.57 pct identical to residues 49 to 188 of 188 from GenPept : >gb|AAG56172.1|AE005347_4 (AE005347) unknown protein encoded within prophage CP-933O [Escherichia coli O157:H7 EDL933] NP_836387.1 residues 1 to 30 of 30 are 89.99 pct identical to residues 1 to 30 of 71 from GenPept : >gb|AAA32349.1| (M65239) S [Bacteriophage 21] NP_836388.1 residues 1 to 228 of 228 are 87.34 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836389.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836390.1 residues 368 to 567 of 619 are 29.32 pct identical to residues 690 to 895 of 916 from GenPept : >gb|AAF10830.1|AE001973_3 (AE001973) SNF2/Rad54 helicase-related protein [Deinococcus radiodurans] NP_836391.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_836392.1 partial NP_836393.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836394.1 residues 41 to 292 of 292 are 95.63 pct identical to residues 1 to 252 of 252 from GenPept : >emb|CAC83536.1| (AJ298298) replication protein DnaC [Bacteriophage P27] NP_836395.1 residues 1 to 463 of 463 are 90.49 pct identical to residues 1 to 463 of 463 from GenPept : >emb|CAC83537.1| (AJ298298) helicase [Bacteriophage P27] NP_836396.1 residues 6 to 85 of 85 are 93.75 pct identical to residues 1 to 80 of 80 from GenPept : >emb|CAC83538.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_836397.1 residues 1 to 66 of 66 are 63.63 pct identical to residues 1 to 64 of 64 from GenPept : >gb|AAD04654.1| (AF034975) nin orf-59 [Bacteriophage H-19B]; homologous to ninH gene NP_836398.1 residues 1 to 124 of 126 are 77.41 pct identical to residues 1 to 124 of 144 from GenPept : >gb|AAD04655.1| (AF034975) Q protein [Bacteriophage H-19B] NP_836399.1 residues 1 to 71 of 71 are 74.64 pct identical to residues 1 to 71 of 71 from GenPept : >gb|AAA32349.1| (M65239) S [Bacteriophage 21] NP_836400.1 no significant similarities NP_836401.1 residues 1 to 177 of 177 are 83.61 pct identical to residues 1 to 177 of 177 from GenPept : >gb|AAG55897.1|AE005323_13 (AE005323) endolysin of prophage CP-933N [Escherichia coli O157:H7 EDL933] NP_836402.1 residues 1 to 134 of 134 are 96.26 pct identical to residues 1 to 134 of 155 from GenPept : >gb|AAK28885.1|AF335538_37 (AF335538) endopeptidase [Bacteriophage HK620] NP_836403.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_836404.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836405.1 residues 1 to 625 of 636 are 91.20 pct identical to residues 13 to 636 of 654 from GenPept : >gb|AAG56410.1|AE005368_16 (AE005368) DNA packaging protein of prophage CP-933R; terminase large subunit [Escherichia coli O157:H7 EDL933] NP_836406.1 residues 1 to 67 of 67 are 79.41 pct identical to residues 1 to 68 of 68 from GenPept : >gb|AAA32341.1| (M81255) head completion protein gp3 [Bacteriophage 21] NP_836407.1 residues 1 to 331 of 351 are 94.25 pct identical to residues 1 to 331 of 530 from GenPept : >gb|AAA32342.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21] NP_836408.1 residues 2 to 193 of 207 are 93.75 pct identical to residues 325 to 516 of 530 from GenPept : >gb|AAA32342.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21] NP_836409.1 residues 1 to 501 of 501 are 88.62 pct identical to residues 1 to 501 of 501 from GenPept : >gb|AAA32343.1| (M81255) head-tail preconnector gp5 [Bacteriophage 21] NP_836410.1 residues 1 to 115 of 115 are 93.04 pct identical to residues 1 to 115 of 115 from GenPept : >gb|AAA32345.1| (M81255) capsid protein small subunit [Bacteriophage 21] NP_836411.1 residues 1 to 342 of 342 are 90.35 pct identical to residues 1 to 342 of 342 from GenPept : >gb|AAA32346.1| (M81255) major capsid protein [Bacteriophage 21] NP_836412.1 residues 3 to 128 of 128 are 37.40 pct identical to residues 2 to 132 of 132 from GenPept : >gb|AAA96541.1| (J02459) Fi (DNA packaging;117) [bacteriophage lambda] NP_836413.1 residues 1 to 117 of 125 are 57.26 pct identical to residues 1 to 117 of 117 from GenPept : >gb|AAA96542.1| (J02459) Fii (head-tail joining;117) [bacteriophage lambda] NP_836414.1 residues 1 to 194 of 194 are 84.53 pct identical to residues 1 to 192 of 192 from GenPept : >gb|AAG55126.1|AE005257_5 (AE005257) tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836415.1 residues 1 to 133 of 133 are 96.99 pct identical to residues 1 to 133 of 133 from GenPept : >gb|AAG55127.1|AE005257_6 (AE005257) tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836416.1 residues 1 to 245 of 246 are 82.85 pct identical to residues 3 to 247 of 249 from GenPept : >gb|AAG55128.1|AE005257_7 (AE005257) tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836417.1 residues 1 to 128 of 128 are 92.18 pct identical to residues 5 to 132 of 132 from GenPept : >gb|AAG55129.1|AE005257_8 (AE005257) tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836418.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 15 to 105 of 105 from GenPept : >gb|AAG55130.1|AE005257_9 (AE005257) tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836419.1 residues 1 to 1013 of 1013 are 78.64 pct identical to residues 1 to 1021 of 1021 from GenPept : >dbj|BAB34260.1| (AP002553) tail length tape measure protein precursor [Escherichia coli O157:H7] NP_836420.1 residues 1 to 108 of 109 are 97.22 pct identical to residues 1 to 108 of 109 from GenPept : >dbj|BAB34261.1| (AP002553) minor tail protein [Escherichia coli O157:H7] NP_836421.1 residues 1 to 232 of 232 are 90.51 pct identical to residues 1 to 232 of 232 from GenPept : >dbj|BAB35068.1| (AP002555) minor tail protein [Escherichia coli O157:H7] NP_836422.1 residues 1 to 199 of 199 are 96.98 pct identical to residues 26 to 224 of 224 from GenPept : >gb|AAG55134.1|AE005257_13 (AE005257) tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836423.1 residues 1 to 180 of 180 are 85.71 pct identical to residues 34 to 215 of 215 from GenPept : >gb|AAG55135.1|AE005257_14 (AE005257) tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836424.1 residues 1 to 1159 of 1159 are 85.13 pct identical to residues 1 to 1132 of 1132 from GenPept : >dbj|BAB35071.1| (AP002555) host specificity protein [Escherichia coli O157:H7] NP_836425.1 residues 1 to 199 of 199 are 93.46 pct identical to residues 1 to 199 of 199 from GenPept : >dbj|BAB35072.1| (AP002555) membrane protein precursor [Escherichia coli O157:H7] NP_836426.1 residues 1 to 291 of 353 are 39.11 pct identical to residues 1 to 294 of 490 from GenPept : >emb|CAC83574.1| (AJ298298) tail fiber protein [Bacteriophage P27] NP_836427.1 residues 21 to 207 of 207 are 68.44 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_836428.1 no significant similarities NP_836429.1 YbhB; similar to rat and human kinase inhibitory proteins NP_836430.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate NP_836431.1 residues 1 to 346 of 346 are 99.42 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B0775 NP_836432.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine NP_836433.1 methyltransferase; acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA, a biotin precursor; member of the bio operon (bioABFCD); in Escherichia coli, bioC-null mutants require biotin for growth NP_836434.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium NP_836435.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion NP_836436.1 residues 1 to 302 of 302 are 91.39 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B0780 NP_836437.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z NP_836438.1 residues 1 to 170 of 170 are 99.41 pct identical to residues 1 to 170 of 170 from Escherichia coli K-12 : B0782 NP_836439.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis NP_836440.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin NP_836441.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin NP_836442.1 residues 1 to 234 of 234 are 93.16 pct identical to residues 1 to 234 of 234 from Escherichia coli K-12 : B0786 NP_836443.1 residues 1 to 237 of 237 are 80.16 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B0787 NP_836444.1 residues 1 to 318 of 318 are 78.30 pct identical to residues 1 to 318 of 318 from Escherichia coli K-12 : B0788 NP_836445.1 residues 1 to 413 of 413 are 91.76 pct identical to residues 1 to 413 of 413 from Escherichia coli K-12 : B0789 NP_836446.1 residues 1 to 253 of 253 are 100.00 pct identical to residues 1 to 253 of 253 from Escherichia coli K-12 : B0790 NP_836447.1 residues 1 to 136 of 136 are 83.08 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B0791 NP_836448.1 residues 1 to 368 of 368 are 96.73 pct identical to residues 1 to 368 of 368 from Escherichia coli K-12 : B0792 NP_836449.1 residues 1 to 377 of 377 are 92.83 pct identical to residues 1 to 377 of 377 from Escherichia coli K-12 : B0793 NP_836450.1 residues 1 to 583 of 583 are 99.82 pct identical to residues 1 to 583 of 583 from Escherichia coli K-12 : B0794 NP_836451.1 residues 1 to 332 of 332 are 82.53 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B0795 NP_836452.1 residues 1 to 227 of 227 are 88.98 pct identical to residues 1 to 227 of 227 from Escherichia coli K-12 : B0796 NP_836453.1 this helicase is not essential cell growth NP_836454.1 residues 1 to 160 of 160 are 96.87 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B0798 NP_836455.1 helicase involved in DNA repair and perhaps also replication NP_836456.1 residues 1 to 320 of 320 are 98.43 pct identical to residues 1 to 320 of 320 from Escherichia coli K-12 : B0800 NP_836457.1 residues 1 to 361 of 361 are 98.89 pct identical to residues 1 to 361 of 361 from Escherichia coli K-12 : B0801 NP_836458.1 residues 1 to 86 of 86 are 84.88 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B0802 NP_836459.1 residues 1 to 88 of 88 are 96.59 pct identical to residues 1 to 88 of 88 from Escherichia coli K-12 : B0803 NP_836460.2 residues 1 to 237 of 237 are 93.24 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B0804 NP_836461.1 residues 1 to 442 of 442 are 99.54 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_836462.1 residues 1 to 134 of 134 are 98.50 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B0806 NP_836463.1 residues 2 to 336 of 336 are 90.74 pct identical to residues 1 to 335 of 335 from Escherichia coli K-12 : B0807 NP_836464.1 similar to ATP-binding component of ABC transporters NP_836465.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine NP_836466.1 similar to periplasmic-binding component of ABC transporters NP_836467.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage NP_836468.1 residues 1 to 295 of 295 are 91.52 pct identical to residues 1 to 295 of 295 from Escherichia coli K-12 : B0813 NP_836469.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains NP_836470.1 residues 1 to 527 of 527 are 97.72 pct identical to residues 1 to 527 of 527 from Escherichia coli K-12 : B0815 NP_836471.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present NP_836472.1 residues 1 to 371 of 372 are 87.60 pct identical to residues 1 to 371 of 372 from Escherichia coli K-12 : B0818 NP_836473.1 residues 1 to 306 of 306 are 99.67 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B0819 NP_836474.1 residues 1 to 530 of 530 are 99.81 pct identical to residues 1 to 530 of 530 from Escherichia coli K-12 : B0820 NP_836475.1 residues 1 to 421 of 421 are 99.04 pct identical to residues 1 to 421 of 421 from Escherichia coli K-12 : B0821 NP_836476.1 residues 1 to 271 of 271 are 99.63 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 : B0822 NP_836477.1 residues 1 to 810 of 810 are 93.20 pct identical to residues 1 to 810 of 810 from Escherichia coli K-12 : B0823 NP_836478.1 residues 1 to 308 of 308 are 94.48 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B0824 NP_836479.2 similar to transaldolase from Escherichia coli; many organisms have multiple copies NP_836480.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase NP_836481.1 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum NP_836482.1 residues 1 to 321 of 321 are 95.95 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B0828 NP_836483.1 with GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains NP_836484.1 residues 1 to 512 of 512 are 99.41 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B0830 NP_836485.1 residues 1 to 306 of 306 are 87.58 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B0831 NP_836486.1 residues 1 to 303 of 303 are 95.04 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 : B0832 NP_836487.1 residues 1 to 442 of 442 are 99.32 pct identical to residues 1 to 442 of 442 from Escherichia coli K-12 : B0834 NP_836488.1 residues 1 to 441 of 441 are 96.82 pct identical to residues 1 to 441 of 441 from Escherichia coli K-12 : B0835 NP_836489.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing NP_836490.1 residues 1 to 210 of 210 are 89.99 pct identical to residues 1 to 210 of 210 from Escherichia coli K-12 : B0838 NP_836491.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836492.1 residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836493.1 residues 1 to 252 of 252 are 94.84 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B0840 NP_836494.1 residues 1 to 198 of 198 are 91.41 pct identical to residues 1 to 198 of 198 from Escherichia coli K-12 : B0841 NP_836495.1 residues 1 to 408 of 408 are 95.12 pct identical to residues 1 to 410 of 410 from Escherichia coli K-12 : B0842; proton motive force efflux pump NP_836496.1 residues 1 to 94 of 94 are 57.44 pct identical to residues 1 to 94 of 94 from Escherichia coli K-12 : B0843 NP_836497.1 residues 1 to 262 of 262 are 98.85 pct identical to residues 1 to 262 of 262 from Escherichia coli K-12 : B0844 NP_836498.1 residues 1 to 402 of 402 are 85.82 pct identical to residues 1 to 402 of 402 from Escherichia coli K-12 : B0845 NP_836499.1 residues 1 to 178 of 178 are 99.43 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 : B0846 NP_836500.1 residues 1 to 561 of 561 are 93.76 pct identical to residues 1 to 561 of 561 from Escherichia coli K-12 : B0847 NP_836501.1 residues 1 to 125 of 125 are 100.00 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B0848 NP_836502.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase NP_836503.1 YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function NP_836504.1 NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds NP_836505.1 responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 NP_836506.1 residues 1 to 158 of 158 are 100.00 pct identical to residues 1 to 158 of 158 from Escherichia coli K-12 : B0853 NP_836507.1 residues 1 to 370 of 370 are 99.72 pct identical to residues 1 to 370 of 370 from Escherichia coli K-12 : B0854 NP_836508.2 part of the PotFGHI ATP-dependent putrescine transporter NP_836509.1 residues 1 to 317 of 317 are 89.90 pct identical to residues 1 to 317 of 317 from Escherichia coli K-12 : B0856 NP_836510.1 residues 1 to 281 of 281 are 86.47 pct identical to residues 1 to 281 of 281 from Escherichia coli K-12 : B0857 NP_836511.1 residues 1 to 162 of 162 are 91.35 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B0858 NP_836512.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA NP_836513.1 residues 1 to 243 of 243 are 92.18 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B0860 NP_836514.1 with ArtPQJI acts to transport arginine across the inner membrane NP_836515.1 with ArtPMJI transports arginine across the inner membrane NP_836516.1 residues 1 to 243 of 243 are 99.17 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B0863 NP_836517.1 With ArtMQJI transports arginine across the inner membrane NP_836518.1 induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS NP_836519.1 residues 1 to 61 of 61 are 100.00 pct identical to residues 1 to 61 of 61 from NP_286635.1, Z1096 gene product Escherichia coli O157:H7 EDL933 NP_836520.1 residues 1 to 402 of 589 are 94.52 pct identical to residues 12 to 412 of 413 from NP_286636.1 Z1097 gene product Escherichia coli O157:H7 EDL933, NP_308976.1 hypothetical protein Escherichia coli O157:H7; E90747 hypothetical protein ECs0949 Escherichia coli (strain O157:H7, substrain RIMD 0509952), B85598 hypothetical protein Z1097 NP_836521.1 residues 1 to 107 of 107 are 99.06 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B0866 NP_836522.1 residues 1 to 276 of 276 are 94.92 pct identical to residues 1 to 276 of 276 from Escherichia coli K-12 : B0867 NP_836523.1 residues 1 to 349 of 349 are 98.56 pct identical to residues 1 to 349 of 349 from Escherichia coli K-12 : B0868 NP_836524.1 residues 1 to 476 of 476 are 96.00 pct identical to residues 11 to 486 of 486 from Escherichia coli K-12 : B0869 NP_836525.1 low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine NP_836526.1 catalyzes the formation of acetate from pyruvate NP_836527.1 residues 1 to 322 of 322 are 94.40 pct identical to residues 1 to 322 of 322 from Escherichia coli K-12 : B0872 NP_836528.2 catalyzes the reduction of hydroxylamine to ammonia and water NP_836529.1 residues 1 to 315 of 315 are 87.61 pct identical to residues 1 to 315 of 315 from Escherichia coli K-12 : B0874 NP_836530.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_836531.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_836532.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure NP_836533.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_836534.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836535.1 residues 1 to 552 of 552 are 97.10 pct identical to residues 1 to 552 of 552 from Escherichia coli K-12 : B0876 NP_836536.1 residues 1 to 330 of 330 are 95.75 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B0877 NP_836537.1 confers macrolide resistance via active drug efflux NP_836538.1 with MacA is involved in the export of macrolide NP_836539.1 inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible NP_836540.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA NP_836541.1 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates NP_836542.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 NP_836543.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys NP_836544.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c NP_836545.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c NP_836546.1 catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding NP_836547.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system NP_836548.1 DNA-binding membrane protein required for chromosome resolution and partitioning NP_836549.1 participates with LolB in the incorporation of lipoprotein into the outer membrane NP_836550.1 residues 1 to 447 of 447 are 99.55 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B0892 NP_836551.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_836552.1 residues 1 to 785 of 785 are 98.47 pct identical to residues 1 to 785 of 785 from Escherichia coli K-12 : B0894 NP_836553.1 residues 1 to 205 of 205 are 100.00 pct identical to residues 1 to 205 of 205 from Escherichia coli K-12 : B0895 NP_836554.1 residues 1 to 263 of 263 are 85.01 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B0896 NP_836555.1 residues 1 to 208 of 208 are 98.55 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B0897 NP_836556.1 residues 1 to 382 of 382 are 90.31 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B0898 NP_836557.1 residues 1 to 224 of 224 are 99.10 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836558.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706) IS orf [Shigella flexneri]; partial NP_836559.1 residues 1 to 533 of 533 are 97.37 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836560.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836561.1 residues 1 to 38 of 68 are 100.00 pct identical to residues 41 to 78 of 172 from GenPept : >gb|AAG56426.1|AE005369_15 (AE005369) unknown protein encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933] NP_836562.1 residues 1 to 96 of 96 are 96.87 pct identical to residues 1 to 96 of 96 from GenPept : >emb|CAD05594.1| (AL627272) bacteriophage protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836563.1 residues 1 to 43 of 43 are 97.67 pct identical to residues 157 to 199 of 199 from GenPept : >emb|CAD05595.1| (AL627272) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836564.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836565.1 residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836566.1 residues 1 to 123 of 123 are 97.56 pct identical to residues 1 to 123 of 199 from GenPept : >gb|AAG56427.1|AE005369_16 (AE005369) unknown protein encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933] NP_836567.1 residues 1 to 32 of 32 are 93.75 pct identical to residues 39 to 70 of 70 from GenPept : >emb|CAD05598.1| (AL627272) host cell-killing modulation protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836568.1 residues 1 to 183 of 188 are 81.42 pct identical to residues 33 to 215 of 236 from GenPept : >gb|AAF85072.1|AE004039_7 (AE004039) conserved hypothetical protein [Xylella fastidiosa 9a5c] NP_836569.1 residues 1 to 140 of 140 are 69.99 pct identical to residues 1 to 140 of 140 from GenPept : >gb|AAG56435.1|AE005370_8 (AE005370) unknown protein encoded within prophage CP-933R [Escherichia coli O157:H7 EDL933] NP_836570.1 residues 1 to 201 of 212 are 97.01 pct identical to residues 1 to 201 of 262 from GenPept : >emb|CAD05607.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836571.1 residues 1 to 127 of 140 are 88.97 pct identical to residues 1 to 127 of 140 from GenPept : >emb|CAD05608.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836572.1 residues 1 to 73 of 75 are 90.41 pct identical to residues 1 to 73 of 75 from GenPept : >gb|AAG56121.1|AE005343_11 (AE005343) regulator of cell division encoded by prophage CP-933O [Escherichia coli O157:H7 EDL933] NP_836573.1 residues 1 to 51 of 51 are 92.15 pct identical to residues 1 to 51 of 51 from GenPept : >emb|CAD05611.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836574.1 residues 1 to 67 of 67 are 97.01 pct identical to residues 1 to 67 of 67 from GenPept : >emb|CAD05612.1| (AL627272) conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_836575.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_836576.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_836577.1 residues 1 to 179 of 179 are 85.47 pct identical to residues 1 to 179 of 179 from GenPept : >emb|CAA80648.1| (Z23101) Sequence similarity to P4 ORF199 suggests ORF179 expression [Shigella flexneri] NP_836578.1 no significant similarities NP_836579.1 residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836580.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836581.1 residues 1 to 182 of 214 are 59.89 pct identical to residues 1 to 178 of 866 from GenPept : >gb|AAG56447.1|AE005371_3 (AE005371) exodeoxyribonuclease VIII of prophage CP-933R [Escherichia coli O157:H7 EDL933] NP_836582.1 residues 1 to 146 of 146 are 100.00 pct identical to residues 1 to 146 of 146 from GenPept : >gb|AAL72524.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_836583.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836584.1 residues 19 to 205 of 205 are 71.12 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_836585.1 residues 1 to 608 of 608 are 63.71 pct identical to residues 1 to 565 of 565 from NRprotein_Feb03 : >ref|NP_085238.1| invasion plasmid antigen [Shigella flexneri] emb|CAC05787.1| IpaH7.8, member of the IpaH family, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri] NP_836586.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate NP_836587.1 residues 1 to 315 of 315 are 99.68 pct identical to residues 36 to 350 of 350 from Escherichia coli K-12 : B0769 NP_836588.1 residues 1 to 456 of 456 are 97.36 pct identical to residues 22 to 477 of 477 from Escherichia coli K-12 : B0770 NP_836589.1 residues 1 to 726 of 726 are 96.41 pct identical to residues 9 to 761 of 761 from Escherichia coli K-12 : B0771 NP_836590.1 outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; YbhC localizes to the cellular poles; member of pectinesterase family NP_836591.1 residues 1 to 256 of 256 are 100.00 pct identical to residues 32 to 287 of 287 from GenPept : >gb|AAG55102.1|AE005255_3 (AE005255) integrase encoded by prophage CP-933K; [Escherichia coli O157:H7 EDL933] NP_836592.1 residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836593.1 residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836594.1 residues 1 to 101 of 142 are 78.21 pct identical to residues 1 to 101 of 165 from GenPept : >gb|AAG55116.1|AE005256_7 (AE005256) lysozyme protein R of prophage CP-933K [Escherichia coli O157:H7 EDL933] NP_836595.1 residues 1 to 165 of 165 are 98.18 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836596.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706) IS orf [Shigella flexneri] NP_836597.1 residues 1 to 165 of 180 are 92.12 pct identical to residues 1 to 165 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836598.1 residues 1 to 108 of 108 are 71.29 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAF09023.1| (AF139596) unknown [Shigella flexneri] NP_836599.1 residues 1 to 295 of 295 are 98.64 pct identical to residues 2 to 296 of 296 from GenPept : >gb|AAL67398.1|AF447814_66 (AF447814) transposase [Escherichia coli] NP_836600.1 residues 21 to 62 of 62 are 100.00 pct identical to residues 492 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836601.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836602.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_836603.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836604.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836605.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836606.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836607.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836608.1 activates pyruvate formate-lyase 1 under anaerobic conditions NP_836609.1 residues 1 to 760 of 760 are 96.31 pct identical to residues 1 to 760 of 760 from Escherichia coli K-12 : B0903 NP_836610.1 residues 1 to 285 of 285 are 95.08 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B0904 NP_836611.1 residues 1 to 586 of 586 are 96.75 pct identical to residues 4 to 589 of 589 from Escherichia coli K-12 : B0905 NP_836612.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine NP_836613.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis NP_836614.1 residues 1 to 442 of 442 are 99.54 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_836615.1 residues 1 to 254 of 254 are 93.70 pct identical to residues 9 to 262 of 262 from Escherichia coli K-12 : B0909 NP_836616.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP NP_836617.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins NP_836618.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control NP_836619.1 involved in the transport of lipid A across the inner membrane NP_836620.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate NP_836621.1 residues 1 to 410 of 410 are 95.12 pct identical to residues 1 to 410 of 410 from Escherichia coli K-12 : B0916 NP_836622.1 residues 1 to 60 of 60 are 100.00 pct identical to residues 1 to 60 of 60 from Escherichia coli K-12 : B0917 NP_836623.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS NP_836624.1 residues 1 to 297 of 297 are 100.00 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B0919 NP_836625.1 residues 1 to 259 of 259 are 89.18 pct identical to residues 1 to 259 of 259 from Escherichia coli K-12 : B0920 NP_836626.1 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA NP_836627.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division NP_836628.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division NP_836629.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects NP_836630.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_836631.1 residues 1 to 615 of 615 are 96.58 pct identical to residues 1 to 615 of 615 from Escherichia coli K-12 : B0925 NP_836632.1 residues 1 to 182 of 182 are 93.40 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B0926 NP_836633.1 residues 1 to 215 of 215 are 99.53 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B0927 NP_836634.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate NP_836635.1 outer membrane porin F; 1a; Ia; b NP_836636.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_836637.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate NP_836638.1 residues 1 to 871 of 871 are 95.63 pct identical to residues 1 to 870 of 870 from Escherichia coli K-12 : B0932 NP_836639.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease NP_836640.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_836641.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_836642.1 catalyzes the release of sulfite from alkanesulfonates NP_836643.2 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease NP_836644.1 residues 1 to 191 of 191 are 92.67 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B0937 NP_836645.1 residues 78 to 231 of 231 are 82.46 pct identical to residues 16 to 167 of 167 from GenPept : >gb|AAK18538.1|AF348706_227 (AF348706) IS1 orfB [Shigella flexneri]; partial NP_836646.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836647.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836648.1 residues 1 to 866 of 866 are 94.91 pct identical to residues 1 to 866 of 866 from Escherichia coli K-12 : B0940 NP_836649.1 residues 1 to 325 of 327 are 89.84 pct identical to residues 1 to 325 of 356 from Escherichia coli K-12 : B0941 NP_836650.1 residues 1 to 180 of 180 are 92.22 pct identical to residues 1 to 180 of 180 from Escherichia coli K-12 : B0942 NP_836651.1 residues 1 to 187 of 187 are 90.90 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B0943 NP_836652.1 residues 1 to 245 of 245 are 82.85 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B0944 NP_836653.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors NP_836654.1 residues 1 to 192 of 192 are 99.47 pct identical to residues 1 to 192 of 192 from Escherichia coli K-12 : B0946 NP_836655.1 residues 1 to 369 of 369 are 95.66 pct identical to residues 1 to 369 of 369 from Escherichia coli K-12 : B0947 NP_836656.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA NP_836657.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth NP_836658.1 residues 1 to 417 of 417 are 96.40 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 : B0950 NP_836659.1 residues 1 to 546 of 546 are 97.43 pct identical to residues 1 to 546 of 546 from Escherichia coli K-12 : B0951 NP_836660.1 residues 6 to 187 of 187 are 99.45 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B0952 NP_836661.1 residues 1 to 55 of 55 are 98.18 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 : B0953 NP_836662.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP NP_836663.1 residues 1 to 586 of 586 are 97.44 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 : B0955 NP_836664.1 residues 1 to 150 of 150 are 100.00 pct identical to residues 1 to 150 of 150 from Escherichia coli K-12 : B0956 NP_836665.1 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d NP_836666.1 residues 1 to 169 of 169 are 79.88 pct identical to residues 1 to 169 of 169 from Escherichia coli K-12 : B0958; suppressor of lon NP_836667.1 residues 1 to 137 of 141 are 100.00 pct identical to residues 1 to 137 of 209 from Escherichia coli K-12 : B0959 NP_836668.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_836669.1 residues 1 to 195 of 195 are 98.97 pct identical to residues 23 to 217 of 301 from GenPept : >gb|AAL72414.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836670.1 residues 1 to 710 of 721 are 92.39 pct identical to residues 1 to 710 of 720 from Escherichia coli K-12 : B0960 NP_836671.1 residues 1 to 148 of 148 are 91.89 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 : B0961 NP_836672.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand NP_836673.2 catalyzes the formation of methylglyoxal from glycerone phosphate NP_836674.1 residues 1 to 220 of 220 are 100.00 pct identical to residues 1 to 220 of 220 from Escherichia coli K-12 : B0964 NP_836675.1 residues 1 to 155 of 155 are 99.35 pct identical to residues 10 to 164 of 164 from Escherichia coli K-12 : B0965 NP_836676.1 residues 1 to 122 of 122 are 100.00 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B0966 NP_836677.1 residues 1 to 367 of 367 are 97.00 pct identical to residues 1 to 367 of 367 from Escherichia coli K-12 : B0967 NP_836678.1 residues 1 to 92 of 92 are 97.82 pct identical to residues 1 to 92 of 92 from Escherichia coli K-12 : B0968 NP_836679.2 transfers sulfur from TusBCD complex to MnmA; involved in thiouridation of U34 position of some tRNAs NP_836680.1 residues 1 to 219 of 219 are 99.54 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B0970 NP_836681.1 residues 1 to 372 of 372 are 91.12 pct identical to residues 1 to 372 of 372 from Escherichia coli K-12 : B0972 NP_836682.1 involved in hydrogen cycling during fermentative growth NP_836683.1 residues 1 to 235 of 235 are 99.57 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B0974 NP_836684.1 HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1) NP_836685.1 involved in processing hydrogenases HyaA and HyaB NP_836686.1 residues 1 to 285 of 285 are 95.08 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B0977 NP_836687.1 residues 1 to 514 of 514 are 96.69 pct identical to residues 1 to 514 of 514 from Escherichia coli K-12 : B0978 NP_836688.1 residues 1 to 378 of 378 are 91.00 pct identical to residues 1 to 378 of 378 from Escherichia coli K-12 : B0979 NP_836689.1 residues 18 to 432 of 432 are 95.18 pct identical to residues 18 to 432 of 432 from Escherichia coli K-12 : B0980 NP_836690.2 Etk and Etp are a tyrosine kinase-tyrosine phosphatase pair, etp dephosphorylates etk NP_836691.1 residues 1 to 379 of 379 are 100.00 pct identical to residues 1 to 379 of 379 from Escherichia coli K-12 : B0983; involved in exopolysaccharide production NP_836692.1 residues 1 to 698 of 698 are 98.85 pct identical to residues 1 to 698 of 698 from Escherichia coli K-12 : B0984 NP_836693.1 residues 1 to 248 of 248 are 99.59 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B0985 NP_836694.1 residues 1 to 214 of 214 are 89.71 pct identical to residues 1 to 214 of 214 from Escherichia coli K-12 : B0986 NP_836695.1 residues 1 to 107 of 107 are 28.97 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B0987 NP_836696.1 residues 1 to 70 of 70 are 100.00 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B0989 NP_836697.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836698.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_836699.1 residues 2 to 71 of 71 are 97.14 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B0990 NP_836700.1 residues 1 to 76 of 76 are 96.05 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B0991 NP_836701.1 residues 1 to 357 of 357 are 95.23 pct identical to residues 1 to 357 of 357 from Escherichia coli K-12 : B0992 NP_836702.1 periplasmic sensory protein associated with the TorRS two-component regulatory system NP_836703.1 response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes NP_836704.1 residues 1 to 390 of 390 are 94.87 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 : B0996 NP_836705.1 residues 1 to 167 of 167 are 89.22 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836706.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836707.1 with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA NP_836708.1 functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock NP_836709.1 residues 1 to 417 of 418 are 88.00 pct identical to residues 1 to 417 of 418 from Escherichia coli K-12 : B1001 NP_836710.1 residues 1 to 413 of 413 are 98.54 pct identical to residues 1 to 413 of 413 from Escherichia coli K-12 : B1002 NP_836711.1 residues 1 to 75 of 75 are 100.00 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B1003 NP_836712.1 stationary phase that binds TrpR repressor NP_836713.1 residues 1 to 76 of 76 are 61.84 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B1005 NP_836714.1 residues 1 to 464 of 464 are 92.24 pct identical to residues 1 to 464 of 464 from Escherichia coli K-12 : B1006 NP_836715.1 residues 1 to 152 of 152 are 99.34 pct identical to residues 1 to 152 of 152 from Escherichia coli K-12 : B1007 NP_836716.1 residues 1 to 196 of 196 are 97.44 pct identical to residues 1 to 196 of 196 from Escherichia coli K-12 : B1008 NP_836717.1 residues 1 to 266 of 266 are 83.83 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B1009 NP_836718.1 residues 1 to 128 of 128 are 99.21 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B1010 NP_836719.1 residues 1 to 244 of 244 are 97.95 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B1011 NP_836720.1 residues 1 to 382 of 382 are 95.54 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B1012 NP_836721.1 residues 1 to 212 of 212 are 91.50 pct identical to residues 1 to 212 of 212 from Escherichia coli K-12 : B1013 NP_836722.1 residues 1 to 388 of 395 are 97.16 pct identical to residues 1 to 388 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei] NP_836723.1 residues 1 to 115 of 115 are 89.56 pct identical to residues 1 to 115 of 121 from GenPept : >emb|CAC14584.1| (X17114) ORF 121 [Escherichia coli] NP_836724.1 residues 12 to 235 of 235 are 91.96 pct identical to residues 20 to 243 of 243 from Escherichia coli K-12 : B1017 NP_836725.1 residues 1 to 375 of 375 are 95.46 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B1018 NP_836726.1 residues 1 to 421 of 421 are 97.87 pct identical to residues 1 to 423 of 423 from Escherichia coli K-12 : B1019 NP_836727.1 residues 1 to 288 of 288 are 100.00 pct identical to residues 1 to 288 of 288 from GenPept : >gb|AAL57519.1|AF453441_3 (AF453441) transposase 1 [Escherichia coli] NP_836728.1 residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli] NP_836729.1 residues 1 to 328 of 328 are 94.20 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B1029 NP_836730.1 residues 1 to 245 of 245 are 87.34 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B1034 NP_836731.1 residues 1 to 184 of 184 are 99.45 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B1035 NP_836732.1 residues 1 to 173 of 173 are 99.42 pct identical to residues 7 to 179 of 179 from Escherichia coli K-12 : B1036 NP_836733.1 nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex NP_836734.1 chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex NP_836735.1 activates the csgBA and csgDEFG operons involved in biofilm formation NP_836736.1 CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface NP_836737.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_836738.1 residues 1 to 181 of 212 are 88.39 pct identical to residues 36 to 216 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836739.1 involved in autoagglutination of curliated cells; not involved in production of curli fibers NP_836740.1 residues 1 to 103 of 103 are 98.05 pct identical to residues 1 to 103 of 103 from Escherichia coli K-12 : B1044 NP_836741.1 residues 1 to 177 of 177 are 99.43 pct identical to residues 1 to 177 of 177 from Escherichia coli K-12 : B1045 NP_836742.1 residues 1 to 493 of 493 are 99.79 pct identical to residues 1 to 493 of 493 from Escherichia coli K-12 : B1046 NP_836743.1 required for the transfer of succinyl residues to the glucan backbone NP_836744.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan NP_836745.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space NP_836746.1 residues 1 to 351 of 351 are 98.00 pct identical to residues 1 to 351 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei] NP_836747.1 residues 1 to 140 of 140 are 100.00 pct identical to residues 1 to 140 of 140 from NRprotein_Feb03 : >ref|NP_706937.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] ref|NP_706962.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] ref|NP_707627.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN42644.1|AE015130_3 orf, conserved hypo NP_836748.1 residues 22 to 289 of 446 are 25.09 pct identical to residues 246 to 502 of 1525 from NRprotein_Feb03 : >ref|NP_395347.1| membrane protein [Yersinia pestis] pir||T14961 hypothetical protein Y1044 - Yersinia pestis plasmid pMT1 gb|AAC13170.1| protein HI1514 homolog [Yersinia pestis] gb|AAC82704.1| unknown [Yersinia pestis] emb|CAB55193.1| membrane protein [Yersinia pestis] NP_836749.1 no significant similarities NP_836750.1 residues 1 to 206 of 206 are 99.51 pct identical to residues 1 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri]; partial NP_836751.1 residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836752.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836753.1 residues 1 to 225 of 225 are 100.00 pct identical to residues 55 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a] NP_836754.1 no significant similarities NP_836755.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_836756.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_836757.1 residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72456.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836758.1 residues 1 to 215 of 215 are 99.06 pct identical to residues 1 to 215 of 215 from GenPept : >gb|AAK18507.1|AF348706_196 (AF348706) IS629 orf [Shigella flexneri]; partial NP_836759.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836760.1 residues 1 to 144 of 159 are 85.41 pct identical to residues 36 to 179 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_836761.1 residues 1 to 74 of 74 are 98.64 pct identical to residues 73 to 146 of 146 from GenPept : >gb|AAL72524.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_836762.1 residues 1 to 306 of 310 are 43.31 pct identical to residues 1 to 310 of 508 from GenPept : >gb|AAG55968.1|AE005329_12 (AE005329) unknown protein encoded by prophage CP-933X [Escherichia coli O157:H7 EDL933] NP_836763.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA NP_836764.1 residues 1 to 350 of 350 are 99.71 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B1055 NP_836765.1 residues 1 to 191 of 191 are 92.67 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B1056 NP_836766.1 residues 1 to 188 of 188 are 83.51 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B1057 NP_836767.1 residues 1 to 37 of 37 are 100.00 pct identical to residues 10 to 46 of 46 from Escherichia coli K-12 : B1058 NP_836768.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids NP_836769.2 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing NP_836770.1 residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B1061 NP_836771.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis NP_836772.1 residues 1 to 186 of 186 are 100.00 pct identical to residues 1 to 186 of 186 from Escherichia coli K-12 : B1063 NP_836773.1 cofactor involved in the reduction of disulfides NP_836774.1 Confers resistance to norfloxacin and enoxacin NP_836775.1 residues 1 to 194 of 194 are 100.00 pct identical to residues 1 to 194 of 194 from Escherichia coli K-12 : B1066; required for acetylation of N-terminal alanine of 30S ribosomal subunit protein S5 NP_836776.1 residues 1 to 215 of 215 are 98.13 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B1067 NP_836777.1 residues 1 to 277 of 277 are 94.58 pct identical to residues 1 to 277 of 307 from Escherichia coli K-12 : B1068 NP_836778.1 residues 1 to 511 of 511 are 86.88 pct identical to residues 1 to 511 of 511 from Escherichia coli K-12 : B1069 NP_836779.1 residues 1 to 138 of 138 are 97.82 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B1070 NP_836780.1 regulates the flagellar specific sigma28 transcription factor NP_836781.1 required for the assembly of the flagellar basal body P-ring NP_836782.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella NP_836783.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production NP_836784.1 the hook connects flagellar basal body to the flagellar filament NP_836785.1 makes up the distal portion of the flagellar basal body rod NP_836786.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod NP_836787.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum NP_836788.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space NP_836789.2 bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase NP_836790.1 residues 1 to 124 of 124 are 87.09 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B1085 NP_836791.1 catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA NP_836792.2 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_836793.1 residues 1 to 173 of 173 are 90.17 pct identical to residues 1 to 173 of 173 from Escherichia coli K-12 : B1088 NP_836794.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not NP_836795.2 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY NP_836796.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs NP_836797.1 residues 1 to 309 of 309 are 93.20 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B1092 NP_836798.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_836799.1 carries the fatty acid chain in fatty acid biosynthesis NP_836800.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_836801.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate NP_836802.1 residues 24 to 340 of 340 are 99.05 pct identical to residues 24 to 340 of 340 from Escherichia coli K-12 : B1097 NP_836803.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) NP_836804.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA NP_836805.1 residues 1 to 265 of 265 are 93.58 pct identical to residues 1 to 265 of 265 from Escherichia coli K-12 : B1100 NP_836806.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_836807.1 residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B1103 NP_836808.1 residues 1 to 125 of 125 are 90.39 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B1104 NP_836809.1 residues 1 to 213 of 213 are 82.62 pct identical to residues 1 to 213 of 213 from Escherichia coli K-12 : B1105 NP_836810.1 catalyzes the phosphorylation of thiamine to thiamine phosphate NP_836811.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides NP_836812.1 residues 1 to 180 of 180 are 100.00 pct identical to residues 20 to 199 of 199 from Escherichia coli K-12 : B1108 NP_836813.1 residues 1 to 434 of 434 are 96.54 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B1109 NP_836814.1 residues 1 to 179 of 179 are 89.94 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B1110 NP_836815.1 residues 1 to 236 of 236 are 99.57 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B1111 NP_836816.1 residues 1 to 70 of 70 are 98.57 pct identical to residues 16 to 85 of 85 from Escherichia coli K-12 : B1112 NP_836817.1 residues 1 to 320 of 320 are 93.12 pct identical to residues 1 to 320 of 320 from Escherichia coli K-12 : B1113 NP_836818.1 residues 1 to 1148 of 1148 are 98.25 pct identical to residues 1 to 1148 of 1148 from Escherichia coli K-12 : B1114; mutation frequency decline NP_836819.1 residues 1 to 357 of 357 are 90.75 pct identical to residues 1 to 357 of 357 from Escherichia coli K-12 : B1115 NP_836820.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane NP_836821.1 outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone NP_836822.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane NP_836823.1 catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine NP_836824.1 Modulates the activities of several enzymes which are inactive in their acetylated form NP_836825.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate NP_836826.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component NP_836827.2 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component NP_836828.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase NP_836829.1 catalyzes the release of the N-terminal amino acid from a tripeptide NP_836830.1 residues 1 to 376 of 376 are 95.21 pct identical to residues 1 to 376 of 376 from Escherichia coli K-12 : B1128 NP_836831.1 residues 1 to 409 of 409 are 100.00 pct identical to residues 8 to 416 of 416 from GenPept : >gb|AAG55933.1|AE005327_3 (AE005327) integrase of prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836832.1 residues 35 to 99 of 100 are 95.38 pct identical to residues 1 to 65 of 65 from GenPept : >dbj|BAB35000.1| (AP002555) Icd-like protein [Escherichia coli O157:H7] NP_836833.1 residues 1 to 99 of 99 are 87.87 pct identical to residues 1 to 99 of 99 from GenPept : >dbj|BAB35004.1| (AP002555) hypothetical protein [Escherichia coli O157:H7] NP_836834.1 residues 142 to 559 of 582 are 49.28 pct identical to residues 309 to 725 of 763 from GenPept : >emb|CAC89726.1| (AJ414145) primase [Yersinia pestis] NP_836835.1 residues 1 to 66 of 66 are 71.21 pct identical to residues 18 to 83 of 83 from GenPept : >gb|AAG55941.1|AE005327_11 (AE005327) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836836.1 no significant similarities NP_836837.1 no significant similarities NP_836838.1 residues 1 to 74 of 74 are 94.59 pct identical to residues 27 to 100 of 100 from GenPept : >gb|AAG55943.1|AE005328_1 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836839.1 residues 1 to 190 of 190 are 97.89 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAG55945.1|AE005328_3 (AE005328) head maturation protease of prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836840.1 residues 1 to 375 of 375 are 97.60 pct identical to residues 13 to 387 of 403 from GenPept : >dbj|BAB35015.1| (AP002555) head portal protein [Escherichia coli O157:H7] NP_836841.1 residues 1 to 112 of 112 are 96.42 pct identical to residues 1 to 112 of 112 from GenPept : >dbj|BAB35016.1| (AP002555) head-tail adaptor [Escherichia coli O157:H7] NP_836842.1 residues 1 to 98 of 98 are 96.93 pct identical to residues 1 to 98 of 98 from GenPept : >gb|AAG55948.1|AE005328_6 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836843.1 residues 1 to 70 of 70 are 71.42 pct identical to residues 60 to 129 of 129 from GenPept : >gb|AAG55949.1|AE005328_7 (AE005328) holin protein of prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836844.1 residues 1 to 91 of 103 are 98.90 pct identical to residues 16 to 106 of 118 from GenPept : >gb|AAG55950.1|AE005328_8 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836845.1 residues 1 to 492 of 492 are 91.46 pct identical to residues 18 to 509 of 509 from GenPept : >gb|AAG55951.1|AE005328_9 (AE005328) terminase of prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836846.1 residues 1 to 93 of 93 are 93.54 pct identical to residues 1 to 93 of 93 from GenPept : >gb|AAG55952.1|AE005328_10 (AE005328) unknown protein encoded by prophage CP-933C [Escherichia coli O157:H7 EDL933] NP_836847.1 residues 1 to 486 of 486 are 93.00 pct identical to residues 1 to 486 of 486 from Escherichia coli K-12 : B1129 NP_836848.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress NP_836849.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide NP_836850.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis NP_836851.2 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs NP_836852.1 residues 1 to 153 of 153 are 100.00 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 : B1134 NP_836853.1 catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA NP_836854.1 Converts isocitrate to alpha ketoglutarate NP_836855.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836856.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836857.1 residues 1 to 507 of 507 are 98.61 pct identical to residues 1 to 507 of 507 from NRprotein_Feb2003 : >sp|P75995|YCGG_ECOLI Hypothetical protein ycgG NP_836858.1 residues 431 to 749 of 773 are 96.86 pct identical to residues 5 to 323 of 338 from NRprotein_Feb2003 : >ref|NP_415688.1| part of ATP-binding component of a transport system [Escherichia coli K12] pir||G64862 hypothetical protein b1170 - Escherichia coli (strain K-12) gb|AAC74254.1| part of ATP-binding component of a transport system [Escherichia coli K12] NP_836859.1 residues 1 to 111 of 111 are 100.00 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B1171 NP_836860.1 residues 1 to 94 of 94 are 35.10 pct identical to residues 1 to 94 of 94 from Escherichia coli K-12 : B1172 NP_836861.1 residues 1 to 70 of 70 are 94.28 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B1173 NP_836862.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell NP_836863.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums NP_836864.1 blocks the formation of polar Z-ring septums NP_836865.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_836866.1 residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli] NP_836867.1 residues 1 to 284 of 284 are 100.00 pct identical to residues 1 to 284 of 288 from GenPept : >gb|AAL57581.1|AF453442_10 (AF453442) transposase 1 [Escherichia coli] NP_836868.1 residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B1179 NP_836869.1 residues 1 to 219 of 219 are 99.08 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B1180 NP_836870.2 residues 1 to 153 of 153 are 100.00 pct identical to residues 6 to 158 of 158 from Escherichia coli K-12 : B1181 NP_836871.1 binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization NP_836872.1 binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization NP_836873.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein NP_836874.1 involved in regulation of intracellular pH under alkaline conditions NP_836875.1 Multifunctional regulator of fatty acid metabolism NP_836876.1 residues 1 to 510 of 510 are 99.60 pct identical to residues 1 to 510 of 510 from Escherichia coli K-12 : B1188 NP_836877.1 catalyzes the oxidative deamination of D-amino acids NP_836878.1 catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA NP_836879.1 residues 116 to 190 of 202 are 42.66 pct identical to residues 42 to 114 of 565 from GenPept : >gb|AAL72346.1| (AF386526) IpaH7.8 [Shigella flexneri 2a] NP_836880.2 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli NP_836881.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine NP_836882.1 residues 1 to 241 of 241 are 99.58 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B1193 NP_836883.1 residues 1 to 244 of 244 are 99.18 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B1194 NP_836884.1 residues 1 to 84 of 84 are 80.95 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 : B1195 NP_836885.1 involved in molybdenum transport NP_836886.1 residues 1 to 269 of 269 are 94.79 pct identical to residues 1 to 269 of 270 from GenPept : >gb|AAC61711.1| (AF081283) Orf2 [Escherichia coli] NP_836887.1 residues 1 to 251 of 252 are 98.40 pct identical to residues 1 to 251 of 252 from GenPept : >gb|AAG56052.1|AE005337_2 (AE005337) iron compound ABC transporter ATP-binding protein [Escherichia coli O157:H7 EDL933] NP_836888.1 residues 1 to 314 of 326 are 87.89 pct identical to residues 1 to 314 of 326 from GenPept : >gb|AAG56053.1|AE005337_3 (AE005337) iron compound ABC transporter permease [Escherichia coli O157:H7 EDL933] NP_836889.1 residues 1 to 340 of 340 are 87.05 pct identical to residues 1 to 340 of 340 from GenPept : >gb|AAG56054.1|AE005337_4 (AE005337) Z1966 gene product [Escherichia coli O157:H7 EDL933] NP_836890.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_836891.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836892.1 periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell NP_836893.1 phosphotransferaese subunit; phosphorylates dihydroxyacetone NP_836894.1 with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone NP_836895.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase NP_836896.1 Positively regulates the dhaKLM operon from a sigma-70 promoter NP_836897.1 residues 1 to 955 of 955 are 88.58 pct identical to residues 1 to 955 of 955 from Escherichia coli K-12 : B1202 NP_836898.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 NP_836899.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation NP_836900.1 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function NP_836901.1 role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport NP_836902.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP NP_836903.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis NP_836904.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein NP_836905.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins NP_836906.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 NP_836907.1 HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB NP_836908.1 residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B1213 NP_836909.1 residues 1 to 269 of 269 are 92.93 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 : B1214 NP_836910.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis NP_836911.1 residues 1 to 366 of 366 are 77.86 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B1216 NP_836912.1 in Escherichia coli this protein ly regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA; has weak affinity for calcium and magnesium ions NP_836913.1 residues 1 to 238 of 238 are 94.53 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B1218 NP_836914.1 residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B1219 NP_836915.1 residues 1 to 417 of 417 are 95.68 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 : B1220 NP_836916.1 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase NP_836917.1 residues 1 to 598 of 598 are 98.32 pct identical to residues 1 to 598 of 598 from Escherichia coli K-12 : B1222 NP_836918.1 residues 1 to 463 of 463 are 80.99 pct identical to residues 1 to 463 of 463 from Escherichia coli K-12 : B1223 NP_836919.1 residues 1 to 1247 of 1247 are 99.83 pct identical to residues 1 to 1247 of 1247 from Escherichia coli K-12 : B1224 NP_836920.1 residues 1 to 512 of 512 are 100.00 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B1225 NP_836921.1 residues 1 to 236 of 236 are 97.88 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B1226 NP_836922.1 residues 1 to 225 of 225 are 93.77 pct identical to residues 1 to 225 of 225 from Escherichia coli K-12 : B1227 NP_836923.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine NP_836924.2 residues 1 to 104 of 119 are 99.03 pct identical to residues 34 to 137 of 152 from Escherichia coli K-12 : B1233 NP_836925.1 residues 1 to 301 of 301 are 96.01 pct identical to residues 14 to 314 of 314 from Escherichia coli K-12 : B1234 NP_836926.1 residues 1 to 337 of 337 are 92.28 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B1235 NP_836927.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose NP_836928.1 residues 1 to 137 of 137 are 72.99 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 : B1237 NP_836929.1 catalyzes the formation of thymidine 5'-phosphate from thymidine NP_836930.1 residues 1 to 442 of 442 are 99.32 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_836931.1 residues 1 to 872 of 891 are 91.74 pct identical to residues 1 to 872 of 891 from Escherichia coli K-12 : B1241 NP_836932.1 residues 1 to 215 of 215 are 99.53 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B1242 NP_836933.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_836934.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_836935.1 residues 1 to 543 of 543 are 95.76 pct identical to residues 1 to 543 of 543 from Escherichia coli K-12 : B1243 NP_836936.1 residues 1 to 306 of 306 are 100.00 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B1244 NP_836937.1 residues 1 to 302 of 302 are 81.45 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B1245 NP_836938.1 residues 1 to 337 of 337 are 99.10 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B1246 NP_836939.1 residues 1 to 334 of 334 are 97.90 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 : B1247 NP_836940.2 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein NP_836941.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) NP_836942.1 residues 1 to 417 of 417 are 95.44 pct identical to residues 1 to 417 of 417 from Escherichia coli K-12 : B1250 NP_836943.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_836944.1 residues 1 to 228 of 228 are 86.49 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_836945.2 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity NP_836946.1 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins NP_836947.1 YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins NP_836948.1 Involved in cell division; probably involved in intracellular septation NP_836949.1 residues 1 to 247 of 247 are 80.97 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B1255 NP_836950.1 receptor for colicin S4 NP_836951.1 residues 1 to 168 of 168 are 97.02 pct identical to residues 1 to 168 of 168 from Escherichia coli K-12 : B1257 NP_836952.1 residues 1 to 166 of 166 are 81.92 pct identical to residues 1 to 166 of 166 from Escherichia coli K-12 : B1258 NP_836953.1 residues 1 to 62 of 78 are 98.38 pct identical to residues 1 to 62 of 78 from Escherichia coli K-12 : B1259 NP_836954.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis NP_836955.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate NP_836956.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate NP_836957.1 bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase; TrpD; forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine; also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate; functions in tryptophan biosynthesis NP_836958.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine NP_836960.1 residues 1 to 293 of 293 are 94.53 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B1266 NP_836961.1 residues 1 to 218 of 218 are 100.00 pct identical to residues 1 to 218 of 218 from Escherichia coli K-12 : B1267 NP_836962.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA NP_836963.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide NP_836964.1 residues 1 to 252 of 252 are 99.20 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B1271 NP_836965.1 SohB; periplasmic protein; member of the peptidase S49 family NP_836966.1 residues 1 to 83 of 83 are 100.00 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B1273 NP_836967.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity NP_836968.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation NP_836969.1 Catalyzes the conversion of citrate to isocitrate NP_836970.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate NP_836971.1 residues 1 to 254 of 254 are 94.09 pct identical to residues 1 to 254 of 254 from Escherichia coli K-12 : B1278; membrane bound NP_836972.1 residues 1 to 102 of 102 are 87.25 pct identical to residues 1 to 102 of 102 from Escherichia coli K-12 : B1279 NP_836973.1 residues 10 to 389 of 389 are 99.73 pct identical to residues 10 to 389 of 389 from Escherichia coli K-12 : B1280 NP_836974.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase NP_836975.1 involved in start site selection during the initiation of translation NP_836976.1 residues 1 to 72 of 72 are 54.16 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B1283 NP_836977.1 residues 1 to 249 of 249 are 99.59 pct identical to residues 1 to 249 of 249 from Escherichia coli K-12 : B1284 NP_836978.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction NP_836979.1 residues 1 to 375 of 375 are 93.06 pct identical to residues 27 to 401 of 401 from Escherichia coli K-12 : B1287 NP_836980.1 Catalyzes a key regulatory step in fatty acid biosynthesis NP_836981.1 residues 1 to 117 of 117 are 95.72 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B1289 NP_836982.1 residues 1 to 268 of 268 are 100.00 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B1290 NP_836983.1 residues 1 to 330 of 330 are 100.00 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B1291 NP_836984.1 residues 1 to 296 of 296 are 94.59 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B1292 NP_836985.1 residues 23 to 321 of 321 are 93.31 pct identical to residues 23 to 321 of 321 from Escherichia coli K-12 : B1293 NP_836986.1 residues 1 to 547 of 547 are 95.24 pct identical to residues 1 to 547 of 547 from Escherichia coli K-12 : B1294 NP_836987.1 residues 1 to 461 of 461 are 99.78 pct identical to residues 19 to 479 of 479 from Escherichia coli K-12 : B1296 NP_836988.1 residues 1 to 472 of 472 are 99.36 pct identical to residues 27 to 498 of 498 from Escherichia coli K-12 : B1297 NP_836989.1 catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate NP_836990.1 regulates genes involved in putrescine degradation NP_836991.1 catalyzes the formation of gamma-glutamyl-gamma-aminobutyrate from Gamma-glutamyl-gamma-aminobutyraldehyde; involved in putrescine degradation NP_836992.1 residues 1 to 426 of 426 are 96.00 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 : B1301 NP_836993.1 putrescine-inducible GABA aminotransferase; catalyzes the formation of glutamate and succinate semialdehyde from 4-aminobutyrate and 2-oxoglutarate NP_836994.2 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor NP_836995.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF NP_836996.1 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding NP_836997.1 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock NP_836998.1 residues 1 to 73 of 73 are 98.63 pct identical to residues 1 to 73 of 73 from Escherichia coli K-12 : B1307 NP_836999.1 rhodanese; catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide NP_837000.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837001.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837002.1 residues 1 to 293 of 293 are 88.73 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B1311 NP_837003.1 residues 1 to 280 of 280 are 94.64 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 : B1312 NP_837004.1 residues 1 to 350 of 350 are 96.28 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B1313 NP_837005.1 residues 1 to 351 of 351 are 95.15 pct identical to residues 1 to 351 of 351 from Escherichia coli K-12 : B1315 NP_837006.1 residues 1 to 755 of 755 are 96.55 pct identical to residues 1 to 755 of 755 from Escherichia coli K-12 : B1316 NP_837007.1 residues 1 to 219 of 219 are 97.26 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B1317 NP_837008.1 residues 1 to 322 of 322 are 95.34 pct identical to residues 1 to 322 of 322 from Escherichia coli K-12 : B1318 NP_837009.1 residues 1 to 332 of 332 are 95.48 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B1320 NP_837010.1 residues 1 to 465 of 465 are 98.06 pct identical to residues 1 to 465 of 465 from Escherichia coli K-12 : B1321 NP_837011.1 residues 1 to 353 of 353 are 90.65 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 : B1322 NP_837012.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids NP_837013.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein NP_837014.1 residues 1 to 321 of 321 are 92.21 pct identical to residues 15 to 335 of 335 from Escherichia coli K-12 : B1325 NP_837015.1 residues 1 to 242 of 242 are 98.76 pct identical to residues 21 to 262 of 262 from Escherichia coli K-12 : B1326 NP_837016.1 residues 1 to 212 of 212 are 99.05 pct identical to residues 5 to 216 of 216 from GenPept : >gb|AAG56475.1|AE005373_9 (AE005373) Z2446 gene product [Escherichia coli O157:H7 EDL933] NP_837017.1 residues 1 to 348 of 361 are 89.65 pct identical to residues 1 to 348 of 398 from GenPept : >gb|AAL72392.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837018.1 residues 1 to 145 of 160 are 85.51 pct identical to residues 1 to 145 of 299 from Escherichia coli K-12 : B1328 NP_837019.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837020.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_837021.1 residues 1 to 544 of 544 are 99.63 pct identical to residues 1 to 544 of 544 from Escherichia coli K-12 : B1329 NP_837022.1 residues 1 to 343 of 343 are 92.41 pct identical to residues 1 to 343 of 343 from Escherichia coli K-12 : B1330 NP_837023.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837024.1 residues 1 to 183 of 190 are 99.45 pct identical to residues 206 to 388 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei] NP_837025.1 residues 1 to 199 of 204 are 98.49 pct identical to residues 1 to 199 of 426 from GenPept : >emb|CAA34970.1| (X17114) transposase IS91 [Escherichia coli] NP_837026.1 residues 1 to 121 of 121 are 90.08 pct identical to residues 1 to 121 of 121 from GenPept : >gb|AAK85177.1| (AF294823) InsA [Shigella sonnei] NP_837027.1 residues 1 to 124 of 133 are 100.00 pct identical to residues 72 to 195 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a] NP_837028.1 with UspC and UspD is involved in resistance to UV irradiation NP_837029.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia NP_837030.1 residues 1 to 171 of 171 are 91.81 pct identical to residues 1 to 171 of 171 from Escherichia coli K-12 : B1335 NP_837031.1 no significant similarities NP_837032.1 residues 4 to 213 of 215 are 30.80 pct identical to residues 26 to 234 of 365 from GenPept : >emb|CAC49806.1| (AL603647) protein secretion protein, HlyD family, similar to E. coli EmrK [Sinorhizobium meliloti] NP_837033.1 residues 1 to 88 of 88 are 100.00 pct identical to residues 1 to 88 of 88 from GenPept : >gb|AAL72506.1| (AF386526) transposase-like protein [Shigella flexneri 2a] NP_837034.1 residues 1 to 274 of 274 are 99.27 pct identical to residues 1 to 274 of 399 from GenPept : >gb|AAL72439.1| (AF386526) transposase [Shigella flexneri 2a] NP_837035.1 residues 2 to 129 of 131 are 56.25 pct identical to residues 236 to 363 of 367 from GenPept : >dbj|BAB49683.1| (AP003000) probable secretion protein [Mesorhizobium loti] NP_837036.1 residues 1 to 327 of 327 are 93.27 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B1342 NP_837037.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA NP_837038.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs NP_837039.1 residues 1 to 168 of 168 are 99.40 pct identical to residues 1 to 168 of 168 from Escherichia coli K-12 : B1376 NP_837040.1 residues 1 to 1174 of 1174 are 99.14 pct identical to residues 1 to 1174 of 1174 from Escherichia coli K-12 : B1378 NP_837041.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837042.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837043.1 residues 1 to 109 of 109 are 97.24 pct identical to residues 2 to 110 of 110 from Escherichia coli K-12 : B1383 NP_837044.1 residues 1 to 61 of 61 are 100.00 pct identical to residues 1 to 61 of 61 from Escherichia coli K-12 : B1382 NP_837045.1 residues 29 to 879 of 879 are 96.94 pct identical to residues 29 to 879 of 879 from Escherichia coli K-12 : B1381 NP_837046.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes NP_837047.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837048.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837049.1 residues 1 to 544 of 544 are 98.16 pct identical to residues 227 to 770 of 770 from Escherichia coli K-12 : B1407 NP_837050.1 residues 1 to 200 of 201 are 82.99 pct identical to residues 3 to 202 of 203 from Escherichia coli K-12 : B1408 NP_837051.1 residues 1 to 264 of 264 are 79.92 pct identical to residues 35 to 298 of 298 from Escherichia coli K-12 : B1409 NP_837052.1 residues 1 to 585 of 585 are 96.92 pct identical to residues 1 to 585 of 585 from Escherichia coli K-12 : B1410 NP_837053.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAB86997.1| (U97492) hypothetical 31 KD protein [Shigella flexneri] NP_837054.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_837055.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds NP_837056.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain NP_837057.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837058.1 NAD-linked NP_837059.2 B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm NP_837060.1 residues 1 to 57 of 57 are 100.00 pct identical to residues 1 to 57 of 57 from Escherichia coli K-12 : B1419 NP_837061.1 residues 1 to 283 of 283 are 98.93 pct identical to residues 1 to 283 of 283 from GenPept : >gb|AAC76582.1| (AE000433) IS150 transposase [Escherichia coli K12]; partial NP_837062.1 residues 1 to 173 of 173 are 100.00 pct identical to residues 1 to 173 of 173 from GenPept : >gb|AAB18534.1| (U00039) orfA in IS150 [Escherichia coli]; partial NP_837063.1 residues 1 to 546 of 546 are 87.72 pct identical to residues 1 to 546 of 546 from Escherichia coli K-12 : B1421 NP_837064.1 residues 1 to 354 of 354 are 99.15 pct identical to residues 1 to 354 of 354 from Escherichia coli K-12 : B1422 NP_837065.1 residues 1 to 447 of 447 are 96.86 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B1423 NP_837066.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans NP_837067.1 residues 1 to 67 of 67 are 98.50 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 : B1425 NP_837068.1 residues 1 to 55 of 55 are 100.00 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 : B1426 NP_837069.1 residues 1 to 178 of 178 are 98.31 pct identical to residues 1 to 178 of 179 from Escherichia coli K-12 : B1427; involved in acetylation of N-terminal serine of 30S ribosomal subunit protein L7 NP_837070.1 residues 1 to 326 of 326 are 98.46 pct identical to residues 1 to 326 of 326 from Escherichia coli K-12 : B1428 NP_837071.1 residues 1 to 330 of 330 are 94.24 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B1429 NP_837072.1 with TehA confers resistance to tellurite NP_837073.1 residues 1 to 218 of 218 are 91.44 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B1431 NP_837074.1 residues 1 to 388 of 395 are 97.93 pct identical to residues 1 to 388 of 426 from GenPept : >emb|CAA34970.1| (X17114) transposase IS91 [Escherichia coli]; partial NP_837075.1 residues 1 to 67 of 108 are 98.50 pct identical to residues 1 to 67 of 79 from GenPept : >gb|AAC70084.1| (AF074613) unknown [Escherichia coli O157:H7]; partial NP_837076.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837077.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837078.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837079.1 residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837080.1 residues 1 to 91 of 91 are 96.70 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 : B1837 NP_837081.1 residues 1 to 78 of 78 are 100.00 pct identical to residues 6 to 83 of 83 from Escherichia coli K-12 : B1836 NP_837082.1 residues 1 to 427 of 427 are 95.55 pct identical to residues 1 to 427 of 427 from Escherichia coli K-12 : B1833 NP_837083.1 residues 1 to 165 of 165 are 98.18 pct identical to residues 19 to 183 of 183 from Escherichia coli K-12 : B1832 NP_837084.1 residues 1 to 39 of 39 are 100.00 pct identical to residues 1 to 39 of 39 from Escherichia coli K-12 : B1831 NP_837085.2 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 NP_837086.1 metalloprotease NP_837087.1 residues 1 to 494 of 494 are 94.12 pct identical to residues 1 to 494 of 494 from Escherichia coli K-12 : B1828 NP_837088.1 residues 1 to 263 of 263 are 99.23 pct identical to residues 1 to 263 of 263 from Escherichia coli K-12 : B1827 NP_837089.1 residues 1 to 47 of 47 are 72.34 pct identical to residues 1 to 47 of 47 from Escherichia coli K-12 : B1826 NP_837090.1 residues 1 to 95 of 95 are 82.10 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B1825 NP_837091.1 residues 1 to 47 of 47 are 100.00 pct identical to residues 1 to 47 of 47 from Escherichia coli K-12 : B1824 NP_837092.1 residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B1823 NP_837093.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth NP_837094.1 membrane protein YebN NP_837095.1 residues 1 to 167 of 167 are 89.22 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837096.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837097.1 residues 1 to 150 of 158 are 90.66 pct identical to residues 1 to 150 of 152 from Escherichia coli K-12 : B1820 NP_837098.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel NP_837099.1 residues 1 to 266 of 266 are 94.36 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B1818; mannose-specific NP_837100.1 residues 1 to 323 of 323 are 91.02 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B1817; mannose-specific NP_837101.1 residues 1 to 516 of 516 are 91.69 pct identical to residues 1 to 518 of 518 from Escherichia coli K-12 : B1816 NP_837102.1 residues 1 to 532 of 532 are 96.05 pct identical to residues 11 to 542 of 542 from Escherichia coli K-12 : B1815 NP_837103.1 residues 1 to 454 of 454 are 97.35 pct identical to residues 1 to 454 of 454 from Escherichia coli K-12 : B1814 NP_837104.1 residues 1 to 192 of 192 are 92.18 pct identical to residues 1 to 192 of 192 from Escherichia coli K-12 : B1813 NP_837105.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine NP_837106.1 residues 1 to 59 of 59 are 96.61 pct identical to residues 1 to 59 of 59 from Escherichia coli K-12 : B1811 NP_837107.1 residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B1810 NP_837108.1 residues 1 to 130 of 130 are 100.00 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B1809 NP_837109.1 residues 1 to 636 of 636 are 99.68 pct identical to residues 1 to 636 of 636 from Escherichia coli K-12 : B1808 NP_837110.1 residues 1 to 231 of 231 are 92.64 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B1807 NP_837111.1 residues 1 to 193 of 193 are 87.56 pct identical to residues 1 to 193 of 193 from Escherichia coli K-12 : B1806 NP_837112.1 Activates fatty acids by binding to coenzyme A NP_837113.1 residues 1 to 371 of 371 are 95.68 pct identical to residues 5 to 375 of 375 from Escherichia coli K-12 : B1804; processes tRNA precursor NP_837114.1 residues 1 to 321 of 321 are 98.13 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B1803 NP_837115.1 residues 80 to 188 of 188 are 48.62 pct identical to residues 68 to 174 of 174 from GenPept : >gb|AAF01132.1|AF083977_53 (AF083977) c-repressor [Enterobacteria phage Mu] NP_837116.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837117.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837118.1 residues 1 to 341 of 341 are 98.82 pct identical to residues 44 to 384 of 384 from Escherichia coli K-12 : B1794 NP_837119.1 residues 1 to 84 of 84 are 100.00 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 : B1793 NP_837120.1 residues 1 to 122 of 122 are 96.72 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B1792 NP_837121.1 residues 1 to 326 of 353 are 89.26 pct identical to residues 1 to 326 of 393 from Escherichia coli K-12 : B1791 NP_837122.1 residues 1 to 148 of 148 are 74.32 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 : B1789 NP_837123.1 residues 1 to 50 of 50 are 80.00 pct identical to residues 1 to 50 of 50 from Escherichia coli K-12 : B1788 NP_837124.1 residues 1 to 167 of 167 are 88.62 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B1787 NP_837125.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837126.1 residues 1 to 455 of 459 are 99.56 pct identical to residues 1 to 455 of 644 from Escherichia coli K-12 : B1783 NP_837127.1 residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B1782 NP_837128.1 residues 1 to 253 of 253 are 83.09 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B1781 NP_837129.1 residues 1 to 294 of 294 are 99.31 pct identical to residues 8 to 301 of 301 from Escherichia coli K-12 : B1780 NP_837130.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate NP_837131.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress NP_837132.1 residues 1 to 90 of 90 are 97.77 pct identical to residues 16 to 105 of 105 from Escherichia coli K-12 : B1777 NP_837133.1 residues 1 to 358 of 358 are 99.16 pct identical to residues 1 to 358 of 358 from Escherichia coli K-12 : B1776 NP_837134.1 residues 1 to 459 of 459 are 90.63 pct identical to residues 1 to 459 of 459 from Escherichia coli K-12 : B1775 NP_837135.1 residues 1 to 278 of 278 are 98.20 pct identical to residues 1 to 278 of 278 from Escherichia coli K-12 : B1773 NP_837136.1 residues 1 to 315 of 315 are 98.73 pct identical to residues 8 to 322 of 322 from Escherichia coli K-12 : B1772 NP_837137.1 residues 1 to 311 of 311 are 99.03 pct identical to residues 16 to 326 of 326 from Escherichia coli K-12 : B1771 NP_837138.1 residues 1 to 252 of 252 are 98.41 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B1770 NP_837139.1 residues 1 to 452 of 452 are 95.79 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 : B1769 NP_837140.2 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide NP_837141.1 converts asparagine to aspartate and ammonia NP_837142.1 SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane NP_837143.1 residues 1 to 183 of 183 are 92.34 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B1765 NP_837144.1 catalyzes the formation of selenophosphate from selenide and ATP NP_837145.1 decatenates replicating daughter chromosomes NP_837146.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837147.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837148.1 residues 1 to 90 of 90 are 98.88 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B1760 NP_837149.1 residues 1 to 120 of 135 are 96.66 pct identical to residues 1 to 120 of 135 from Escherichia coli K-12 : B1759 NP_837150.1 residues 1 to 206 of 206 are 88.83 pct identical to residues 3 to 208 of 208 from Escherichia coli K-12 : B1758 NP_837151.1 residues 1 to 217 of 217 are 93.08 pct identical to residues 1 to 217 of 217 from Escherichia coli K-12 : B1756 NP_837152.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_837153.1 residues 1 to 182 of 182 are 92.30 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B1753 NP_837154.1 residues 1 to 233 of 234 are 91.41 pct identical to residues 2 to 234 of 235 from Escherichia coli K-12 : B1752 NP_837155.1 residues 1 to 279 of 279 are 92.47 pct identical to residues 1 to 279 of 279 from Escherichia coli K-12 : B1751 NP_837156.1 residues 1 to 236 of 236 are 91.10 pct identical to residues 17 to 252 of 252 from Escherichia coli K-12 : B1750 NP_837157.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction NP_837158.1 residues 1 to 343 of 343 are 99.70 pct identical to residues 2 to 344 of 344 from Escherichia coli K-12 : B1747 NP_837159.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH NP_837160.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism NP_837161.1 periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP NP_837162.1 residues 1 to 191 of 191 are 98.42 pct identical to residues 22 to 212 of 212 from Escherichia coli K-12 : B1742 NP_837163.1 3' incision activity; acts with UvrC NP_837164.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers NP_837165.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein NP_837166.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport NP_837167.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport NP_837168.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837169.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837170.1 residues 1 to 450 of 450 are 98.44 pct identical to residues 1 to 450 of 450 from Escherichia coli K-12 : B1734 NP_837171.1 residues 1 to 252 of 252 are 92.85 pct identical to residues 1 to 249 of 249 from Escherichia coli K-12 : B1733 NP_837172.1 Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide NP_837173.1 residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from Escherichia coli K-12 : B1731 NP_837174.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837175.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837176.1 residues 1 to 196 of 196 are 100.00 pct identical to residues 5 to 200 of 200 from Escherichia coli K-12 : B1728 NP_837177.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate NP_837178.1 residues 1 to 178 of 178 are 98.87 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 : B1726 NP_837179.1 residues 1 to 286 of 286 are 99.30 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B1725 NP_837180.1 residues 1 to 96 of 96 are 98.95 pct identical to residues 1 to 96 of 96 from Escherichia coli K-12 : B1724 NP_837181.1 residues 1 to 309 of 309 are 99.35 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B1723; suppressor of pfkA NP_837182.1 residues 1 to 241 of 241 are 99.58 pct identical to residues 12 to 252 of 252 from Escherichia coli K-12 : B1722 NP_837183.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837184.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837185.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_837186.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits NP_837187.1 residues 1 to 65 of 65 are 70.76 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 : B1717 NP_837188.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit NP_837190.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily NP_837191.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily NP_837192.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control NP_837193.1 with BtuD and BtuF transports vitamin B12 into the cell NP_837194.1 similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane NP_837195.1 ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell NP_837196.1 residues 1 to 154 of 154 are 98.70 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B1708 NP_837197.1 residues 1 to 237 of 237 are 97.04 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B1707 NP_837198.1 residues 1 to 478 of 478 are 97.69 pct identical to residues 1 to 478 of 478 from Escherichia coli K-12 : B1706 NP_837199.1 residues 1 to 63 of 63 are 98.41 pct identical to residues 1 to 63 of 63 from Escherichia coli K-12 : B1705 NP_837200.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate NP_837201.1 residues 1 to 277 of 277 are 95.66 pct identical to residues 1 to 277 of 277 from Escherichia coli K-12 : B1703 NP_837202.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_837203.1 acts in anaerobic beta-oxidation of fatty acids; possible ligase/synthase involved in anaerobic growth on fatty acids NP_837204.1 residues 1 to 97 of 97 are 95.87 pct identical to residues 1 to 97 of 97 from Escherichia coli K-12 : B1700 NP_837205.1 residues 1 to 429 of 429 are 91.60 pct identical to residues 1 to 429 of 429 from Escherichia coli K-12 : B1699 NP_837206.1 May play a role in a redox process NP_837207.1 YdiO, YdiQ, YdiR, YdiS, and YdiT may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain NP_837208.1 residues 1 to 160 of 166 are 99.37 pct identical to residues 1 to 160 of 303 from Escherichia coli K-12 : B1696 NP_837209.1 residues 1 to 97 of 97 are 81.44 pct identical to residues 35 to 131 of 131 from GenPept : >gb|AAL72404.1| (AF386526) transposase [Shigella flexneri 2a]; partial NP_837210.1 regulates the cellular response to acid resistance NP_837211.1 residues 1 to 64 of 67 are 79.68 pct identical to residues 1 to 64 of 65 from Escherichia coli K-12 : B1500 NP_837212.1 in Escherichia coli it may be involved in repression of type III secretion system (TTSS) genes of the host cell; involved with increased resistance to low pH; member of the prokaryotic molybdopterin-containing oxidoreductase family NP_837213.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837214.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837215.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837216.1 residues 1 to 59 of 59 are 67.79 pct identical to residues 1 to 59 of 71 from GenPept : >emb|CAC12891.1| (AJ279086) S protein [Shigella sonnei bacteriophage 7888] NP_837217.1 residues 1 to 67 of 67 are 99.00 pct identical to residues 1 to 66 of 66 from NRprotein_Feb03 : >ref|NP_753340.1| Hypothetical protein [Escherichia coli CFT073] gb|AAN79900.1|AE016759_174 Hypothetical protein [Escherichia coli CFT073] NP_837218.1 residues 5 to 113 of 118 are 40.36 pct identical to residues 6 to 114 of 120 from Escherichia coli K-12 : B0550 NP_837219.1 residues 1 to 82 of 82 are 93.90 pct identical to residues 2 to 83 of 83 from Escherichia coli K-12 : B1561 NP_837220.1 residues 1 to 51 of 51 are 100.00 pct identical to residues 1 to 51 of 51 from Escherichia coli K-12 : B1562 NP_837221.1 residues 1 to 95 of 95 are 100.00 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B1563 NP_837222.1 Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor NP_837223.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_837224.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837225.1 residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837226.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837227.1 residues 1 to 486 of 486 are 98.35 pct identical to residues 1 to 486 of 486 from Escherichia coli K-12 : B1542 NP_837228.1 residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 : B1541 NP_837229.1 residues 1 to 228 of 228 are 100.00 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B1540 NP_837230.1 NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine NP_837231.1 residues 1 to 681 of 681 are 94.71 pct identical to residues 1 to 681 of 681 from Escherichia coli K-12 : B1538 NP_837232.1 residues 1 to 154 of 172 are 86.36 pct identical to residues 1 to 154 of 172 from Escherichia coli K-12 : B1537 NP_837233.1 residues 1 to 75 of 77 are 97.33 pct identical to residues 1 to 75 of 130 from Escherichia coli K-12 : B1536 NP_837234.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837235.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837236.1 residues 2 to 372 of 372 are 95.41 pct identical to residues 25 to 395 of 395 from Escherichia coli K-12 : B1534 NP_837237.2 residues 1 to 266 of 266 are 98.87 pct identical to residues 1 to 266 of 266 from Escherichia coli K-12 : B1533 NP_837238.1 residues 1 to 72 of 72 are 62.50 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B1532 NP_837239.1 transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF NP_837240.2 Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes NP_837241.1 protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function NP_837242.1 residues 1 to 396 of 396 are 87.12 pct identical to residues 1 to 396 of 396 from Escherichia coli K-12 : B1528 NP_837243.1 residues 1 to 371 of 371 are 96.76 pct identical to residues 1 to 371 of 371 from Escherichia coli K-12 : B1527 NP_837244.1 catalyzes the formation of glutamate from glutamine NP_837245.1 residues 1 to 114 of 114 are 85.96 pct identical to residues 1 to 114 of 119 from Escherichia coli K-12 : B1523 NP_837246.1 residues 11 to 325 of 325 are 92.69 pct identical to residues 1 to 315 of 315 from Escherichia coli K-12 : B1522 NP_837247.1 catalyzes the formation of D-tagaturonate from D-altronate NP_837248.1 residues 1 to 321 of 321 are 99.68 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B1520 NP_837249.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate NP_837250.1 residues 1 to 96 of 96 are 98.95 pct identical to residues 1 to 96 of 96 from Escherichia coli K-12 : B1518 NP_837251.1 residues 1 to 260 of 260 are 98.46 pct identical to residues 32 to 291 of 291 from Escherichia coli K-12 : B1517; part of yneB NP_837252.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837253.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837254.1 residues 1 to 317 of 317 are 89.90 pct identical to residues 1 to 317 of 317 from Escherichia coli K-12 : B1512 NP_837255.1 residues 1 to 511 of 511 are 98.43 pct identical to residues 1 to 511 of 511 from Escherichia coli K-12 : B1513 NP_837256.1 residues 1 to 342 of 342 are 83.62 pct identical to residues 1 to 342 of 342 from Escherichia coli K-12 : B1514 NP_837257.1 residues 1 to 330 of 330 are 76.36 pct identical to residues 1 to 330 of 330 from Escherichia coli K-12 : B1515 NP_837258.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837259.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837260.1 residues 1 to 270 of 270 are 95.92 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445) transposase B [Pantoea agglomerans] NP_837261.1 residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445) transposase A [Pantoea agglomerans] NP_837262.1 residues 1 to 403 of 404 are 99.75 pct identical to residues 1 to 403 of 404 from Escherichia coli K-12 : B1581 NP_837263.1 residues 1 to 108 of 108 are 99.07 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B1582 NP_837264.1 residues 1 to 113 of 113 are 89.38 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 : B1583 NP_837265.2 residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B1585 NP_837266.1 residues 1 to 101 of 101 are 83.16 pct identical to residues 15 to 115 of 115 from Escherichia coli K-12 : B1586 NP_837267.1 residues 3 to 327 of 329 are 91.69 pct identical to residues 2 to 326 of 327 from GenPept : >emb|CAD02863.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_837268.1 residues 1 to 163 of 163 are 84.66 pct identical to residues 1 to 163 of 163 from GenPept : >emb|CAD02864.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_837269.1 no significant similarities NP_837270.1 no significant similarities NP_837271.1 no significant similarities NP_837272.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_837273.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837274.1 residues 4 to 193 of 262 are 27.77 pct identical to residues 57 to 243 of 548 from GenPept : >emb|CAD02867.1| (AL627277) possible integrase [Salmonella enterica subsp. enterica serovar Typhi] NP_837275.1 residues 1 to 205 of 205 are 99.51 pct identical to residues 1 to 205 of 205 from Escherichia coli K-12 : B1589 NP_837276.1 residues 1 to 284 of 284 are 90.49 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B1590 NP_837277.1 binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane NP_837278.2 residues 1 to 438 of 438 are 81.05 pct identical to residues 1 to 438 of 438 from Escherichia coli K-12 : B1592 NP_837279.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium NP_837280.1 residues 1 to 406 of 406 are 99.26 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B1594 NP_837281.1 residues 1 to 303 of 303 are 94.71 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B1595 NP_837282.2 required for growth and survival under moderately acid conditions NP_837283.1 residues 1 to 273 of 273 are 99.26 pct identical to residues 1 to 273 of 273 from Escherichia coli K-12 : B1598 NP_837284.1 with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS NP_837285.1 with MdtI is involved in resistance to deoxycholate , nalidixic acid, fosfomycin, and SDS NP_837286.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes NP_837287.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme NP_837288.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm NP_837289.1 residues 1 to 314 of 314 are 88.53 pct identical to residues 1 to 314 of 314 from Escherichia coli K-12 : B1604 NP_837290.1 residues 1 to 460 of 460 are 95.86 pct identical to residues 1 to 460 of 460 from Escherichia coli K-12 : B1605 NP_837291.1 residues 1 to 240 of 240 are 92.50 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 : B1606 NP_837292.1 residues 23 to 111 of 111 are 100.00 pct identical to residues 23 to 111 of 111 from Escherichia coli K-12 : B1607 NP_837293.1 response regulator in two-component regulatory system with RstB NP_837294.1 residues 1 to 345 of 348 are 70.43 pct identical to residues 100 to 444 of 448 from GenPept : >emb|CAD01997.1| (AL627271) transporter [Salmonella enterica subsp. enterica serovar Typhi] NP_837295.1 residues 1 to 433 of 433 are 95.61 pct identical to residues 1 to 433 of 433 from Escherichia coli K-12 : B1609 NP_837296.1 binds to DNA replication terminator sequences to prevent passage of replication forks NP_837297.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle NP_837298.1 residues 1 to 548 of 548 are 99.63 pct identical to residues 1 to 548 of 548 from Escherichia coli K-12 : B1612 NP_837299.1 residues 1 to 391 of 391 are 99.48 pct identical to residues 1 to 391 of 391 from Escherichia coli K-12 : B1613 NP_837300.1 residues 1 to 487 of 491 are 93.83 pct identical to residues 1 to 487 of 502 from Escherichia coli K-12 : B1614 NP_837301.2 residues 1 to 415 of 415 are 98.55 pct identical to residues 3 to 417 of 417 from Escherichia coli K-12 : B1615 NP_837302.1 residues 1 to 566 of 567 are 99.46 pct identical to residues 1 to 566 of 603 from Escherichia coli K-12 : B1617 NP_837303.1 residues 1 to 196 of 196 are 100.00 pct identical to residues 1 to 196 of 196 from Escherichia coli K-12 : B1618 NP_837304.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837305.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837306.1 regulates malXY which are involved in maltose-glucose transport NP_837307.1 phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site NP_837308.1 residues 1 to 390 of 390 are 98.71 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 : B1622 NP_837309.1 catalyzes the formation of inosine from adenosine NP_837310.2 residues 1 to 359 of 359 are 94.42 pct identical to residues 1 to 359 of 359 from Escherichia coli K-12 : B1624 NP_837311.1 YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes NP_837312.1 residues 1 to 146 of 146 are 79.45 pct identical to residues 9 to 154 of 154 from Escherichia coli K-12 : B1626 NP_837313.1 residues 1 to 193 of 193 are 92.22 pct identical to residues 1 to 193 of 193 from Escherichia coli K-12 : B1627 NP_837314.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen NP_837315.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen NP_837316.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents NP_837317.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen NP_837318.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase NP_837319.1 DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines NP_837320.1 mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation NP_837321.1 residues 1 to 201 of 201 are 93.03 pct identical to residues 1 to 201 of 201 from Escherichia coli K-12 : B1635 NP_837322.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal NP_837323.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) NP_837324.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate NP_837325.1 residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B1639 NP_837326.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837327.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837328.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling NP_837329.1 residues 1 to 155 of 155 are 65.16 pct identical to residues 1 to 155 of 155 from Escherichia coli K-12 : B1641 NP_837330.2 Transcription regulator that can both activate or repress expression NP_837331.1 residues 1 to 78 of 78 are 84.61 pct identical to residues 1 to 78 of 78 from Escherichia coli K-12 : B1643 NP_837332.1 residues 1 to 288 of 288 are 97.56 pct identical to residues 12 to 299 of 299 from Escherichia coli K-12 : B1644 NP_837333.1 SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water NP_837334.1 residues 1 to 298 of 298 are 93.95 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B1647 NP_837335.1 residues 1 to 125 of 125 are 100.00 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B1648 NP_837336.1 residues 1 to 199 of 199 are 99.49 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B1649 NP_837337.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide NP_837338.1 Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione NP_837339.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) NP_837340.1 residues 1 to 382 of 382 are 96.85 pct identical to residues 21 to 402 of 402 from Escherichia coli K-12 : B1432 NP_837341.1 residues 1 to 115 of 115 are 100.00 pct identical to residues 1 to 115 of 115 from Escherichia coli K-12 : B1654 NP_837342.1 residues 1 to 275 of 275 are 79.63 pct identical to residues 1 to 271 of 271 from Escherichia coli K-12 : B1655 NP_837343.1 SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals NP_837344.1 residues 1 to 389 of 389 are 86.63 pct identical to residues 1 to 389 of 389 from Escherichia coli K-12 : B1657 NP_837345.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers NP_837346.1 residues 1 to 310 of 310 are 99.35 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 : B1659 NP_837347.1 uncharacterized member of the major facilitator superfamily (MFS) NP_837348.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge NP_837349.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine NP_837350.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones NP_837351.1 residues 1 to 418 of 418 are 98.56 pct identical to residues 1 to 418 of 418 from Escherichia coli K-12 : B1664 NP_837352.1 residues 1 to 101 of 101 are 100.00 pct identical to residues 1 to 101 of 101 from Escherichia coli K-12 : B1667 NP_837353.1 residues 1 to 270 of 270 are 92.96 pct identical to residues 1 to 270 of 270 from Escherichia coli K-12 : B1669 NP_837354.1 residues 1 to 261 of 261 are 80.45 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 : B1670 NP_837355.1 residues 1 to 239 of 239 are 98.74 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B1671 NP_837356.1 residues 1 to 212 of 212 are 87.26 pct identical to residues 4 to 215 of 215 from Escherichia coli K-12 : B1672 NP_837357.1 residues 1 to 208 of 208 are 91.82 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B1674 NP_837358.1 residues 1 to 69 of 69 are 100.00 pct identical to residues 1 to 69 of 69 from Escherichia coli K-12 : B1675 NP_837359.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837360.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837361.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_837362.1 residues 1 to 78 of 78 are 100.00 pct identical to residues 1 to 78 of 78 from Escherichia coli K-12 : B1677 NP_837363.1 residues 1 to 334 of 334 are 99.70 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 : B1678 NP_837364.1 Acts with SufS to catalyze the formation of L-alanine from L-cysteine NP_837365.1 catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine NP_837366.1 with SufBC activates cysteine desulfurase SufS NP_837367.1 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE NP_837368.1 with SufCD activates cysteine desulfurase SufS NP_837369.1 functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein NP_837370.1 residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B1685 NP_837371.1 residues 1 to 136 of 136 are 99.26 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B1686 NP_837372.1 residues 1 to 1018 of 1018 are 97.54 pct identical to residues 1 to 1018 of 1018 from Escherichia coli K-12 : B1687 NP_837373.1 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function NP_837374.1 residues 1 to 118 of 118 are 98.30 pct identical to residues 10 to 127 of 127 from Escherichia coli K-12 : B1689 NP_837375.1 residues 1 to 381 of 381 are 98.43 pct identical to residues 21 to 404 of 404 from Escherichia coli K-12 : B1690 NP_837376.1 residues 1 to 386 of 386 are 91.19 pct identical to residues 38 to 423 of 423 from Escherichia coli K-12 : B1691 NP_837377.1 YdiB; quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate NP_837378.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis NP_837379.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837380.1 residues 49 to 88 of 88 are 97.50 pct identical to residues 1 to 40 of 100 from GenPept : >gb|AAL72519.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837381.1 residues 1 to 385 of 385 are 99.22 pct identical to residues 6 to 390 of 390 from Escherichia coli K-12 : B1497 NP_837382.1 residues 1 to 786 of 786 are 97.97 pct identical to residues 1 to 790 of 790 from Escherichia coli K-12 : B1495 NP_837383.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837384.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837385.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837386.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837387.1 residues 1 to 466 of 466 are 100.00 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 : B1493 NP_837388.1 residues 1 to 511 of 511 are 87.27 pct identical to residues 1 to 511 of 511 from Escherichia coli K-12 : B1492 NP_837389.1 residues 1 to 439 of 439 are 100.00 pct identical to residues 1 to 439 of 439 from Escherichia coli K-12 : B1491 NP_837390.1 residues 1 to 298 of 298 are 90.26 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B1485 NP_837391.1 residues 1 to 328 of 328 are 97.86 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B1484 NP_837392.1 residues 1 to 143 of 143 are 100.00 pct identical to residues 1 to 143 of 143 from Escherichia coli K-12 : B1482 NP_837393.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837394.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837395.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate NP_837396.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs NP_837397.1 residues 1 to 120 of 120 are 89.99 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B1477 NP_837398.1 nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase NP_837399.1 residues 1 to 283 of 294 are 100.00 pct identical to residues 1 to 283 of 294 from Escherichia coli K-12 : B1475 NP_837400.1 residues 1 to 1015 of 1015 are 99.21 pct identical to residues 1 to 1015 of 1015 from Escherichia coli K-12 : B1474; selenocysteine NP_837401.1 residues 1 to 293 of 293 are 90.78 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B1473 NP_837402.1 residues 1 to 93 of 364 are 100.00 pct identical to residues 1 to 93 of 96 from Escherichia coli K-12 : B1472 NP_837403.1 residues 1 to 317 of 329 are 92.42 pct identical to residues 1 to 317 of 318 from Escherichia coli K-12 : B1471 NP_837404.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837405.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837406.1 residues 1 to 462 of 462 are 90.90 pct identical to residues 1 to 462 of 462 from Escherichia coli K-12 : B1469 NP_837407.1 residues 1 to 406 of 406 are 98.02 pct identical to residues 1 to 406 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei]; partial NP_837408.1 residues 1 to 240 of 240 are 90.83 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 : B1450 NP_837409.1 residues 1 to 376 of 376 are 98.93 pct identical to residues 1 to 376 of 376 from Escherichia coli K-12 : B1449 NP_837410.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837411.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837412.1 residues 1 to 172 of 172 are 91.27 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B1448 NP_837413.1 residues 1 to 149 of 149 are 98.65 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B1447 NP_837414.1 residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 : B1446 NP_837415.1 residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B1445 NP_837416.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation NP_837417.1 residues 1 to 264 of 264 are 74.24 pct identical to residues 1 to 264 of 264 from Escherichia coli K-12 : B1443 NP_837418.1 residues 1 to 199 of 204 are 98.49 pct identical to residues 1 to 199 of 406 from GenPept : >gb|AAK85176.1| (AF294823) transposase [Shigella sonnei]; partial NP_837419.1 residues 1 to 148 of 148 are 83.33 pct identical to residues 19 to 168 of 168 from GenPept : >dbj|BAA84868.1| (AB024946) orf33 [Escherichia coli] NP_837420.1 residues 1 to 68 of 68 are 100.00 pct identical to residues 30 to 97 of 97 from GenPept : >gb|AAL72510.1| (AF386526) transposase tnpC-like protein [Shigella flexneri 2a]; partial NP_837421.1 residues 1 to 119 of 119 are 100.00 pct identical to residues 17 to 135 of 135 from GenPept : >gb|AAL72509.1| (AF386526) transposase-like protein [Shigella flexneri 2a]; partial NP_837422.1 residues 1 to 108 of 108 are 70.37 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837423.1 residues 1 to 113 of 113 are 86.72 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 : B1839 NP_837424.1 residues 1 to 124 of 124 are 89.51 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B1841 NP_837425.1 residues 1 to 76 of 76 are 100.00 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B1842 NP_837426.1 residues 1 to 141 of 141 are 99.29 pct identical to residues 78 to 218 of 218 from Escherichia coli K-12 : B1843 NP_837427.1 3'-5' exonuclease activity on single or double-strand DNA NP_837428.1 PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues NP_837429.1 residues 1 to 219 of 219 are 72.60 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B1846 NP_837430.1 secreted protein; unknown function NP_837431.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis NP_837432.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate NP_837433.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate NP_837434.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_837435.1 Represses the expression of the zwf, eda, glp and gap NP_837436.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_837437.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA NP_837438.1 residues 22 to 440 of 440 are 100.00 pct identical to residues 1 to 419 of 419 from Escherichia coli K-12 : B1856 NP_837439.2 involved in transport of zinc(II) with ZnuA and C NP_837440.1 involved in transport of zinc(II) with ZnuA and C NP_837441.1 involved in transport of zinc(II) with ZnuA and C NP_837442.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration NP_837443.1 plays an essential role in ATP-dependent branch migration of the Holliday junction NP_837444.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity NP_837445.1 residues 1 to 246 of 246 are 100.00 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B1864 NP_837446.1 converts dATP to dAMP and pyrophosphate NP_837447.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes NP_837448.1 residues 1 to 398 of 398 are 91.45 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAL72391.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837449.1 residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from GenPept : >gb|AAG57731.1|AE005491_11 (AE005491) Z3916 gene product [Escherichia coli O157:H7 EDL933] NP_837450.1 residues 1 to 583 of 583 are 99.82 pct identical to residues 1 to 583 of 583 from NRprotein_Feb03 : >ref|NP_707728.1| IpaH9.8 [Shigella flexneri 2a str. 301] gb|AAN43435.1|AE015207_3 IpaH9.8 [Shigella flexneri 2a str. 301] NP_837451.1 no significant similarities NP_837452.1 residues 21 to 207 of 207 are 68.44 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837453.1 residues 1 to 180 of 180 are 70.55 pct identical to residues 1 to 179 of 179 from GenPept : >emb|CAA80648.1| (Z23101) Sequence similarity to P4 ORF199 suggests ORF179 expression [Shigella flexneri] NP_837454.1 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837455.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837456.1 Rac prophage hypothetical protein NP_837457.1 residues 1 to 474 of 474 are 96.20 pct identical to residues 1 to 474 of 1042 from GenPept : >emb|CAD05617.1| (AL627272) exodeoxyribonuclease VIII [Salmonella enterica subsp. enterica serovar Typhi] NP_837458.1 residues 10 to 105 of 106 are 83.33 pct identical to residues 2 to 97 of 98 from GenPept : >dbj|BAB87956.1| (AP004402) Gam protein [Stx2 converting bacteriophage I] NP_837459.1 residues 1 to 181 of 347 are 28.27 pct identical to residues 15 to 188 of 340 from GenPept : >gb|AAK94416.1|AF396866_81 (AF396866) p81 [Bacteriophage Mx8] NP_837460.1 residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAF09023.1| (AF139596) unknown [Shigella flexneri] NP_837461.1 residues 1 to 215 of 215 are 99.06 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; partial NP_837462.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837463.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837464.1 residues 1 to 201 of 201 are 97.51 pct identical to residues 211 to 411 of 411 from GenPept : >gb|AAG56452.1|AE005371_8 (AE005371) integrase for prophage CP-933R [Escherichia coli O157:H7 EDL933] NP_837465.1 residues 16 to 296 of 296 are 79.35 pct identical to residues 24 to 304 of 305 from GenPept : >gb|AAL21741.1| (AE008830) Salmonella iron transporter: fur regulated [Salmonella typhimurium LT2] NP_837466.1 residues 2 to 266 of 275 are 77.73 pct identical to residues 1 to 265 of 273 from GenPept : >emb|CAD05969.1| (AL627276) Iron transport protein, ATP-binding component [Salmonella enterica subsp. enterica serovar Typhi] NP_837467.1 residues 1 to 277 of 285 are 75.45 pct identical to residues 1 to 277 of 286 from GenPept : >gb|AAL21743.1| (AE008830) Salmonella iron transporter: fur regulated [Salmonella typhimurium LT2] NP_837468.1 residues 2 to 263 of 285 are 64.50 pct identical to residues 3 to 264 of 282 from GenPept : >emb|CAD05971.1| (AL627276) Iron transport protein, inner membrane component [Salmonella enterica subsp. enterica serovar Typhi] NP_837469.1 residues 1 to 187 of 187 are 70.05 pct identical to residues 2 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837470.1 residues 1 to 420 of 422 are 37.55 pct identical to residues 1 to 488 of 490 from GenPept : >emb|CAC83574.1| (AJ298298) tail fiber protein [Bacteriophage P27] NP_837471.1 residues 9 to 162 of 162 are 75.97 pct identical to residues 29 to 182 of 182 from GenPept : >emb|CAC83573.1| (AJ298298) tail fiber assembly protein [Bacteriophage P27] NP_837472.1 residues 5 to 67 of 67 are 58.73 pct identical to residues 497 to 558 of 558 from GenPept : >dbj|BAA00552.1| (D00660) Bcv gene product [Shigella boydii] NP_837473.1 residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837474.1 residues 1 to 69 of 69 are 100.00 pct identical to residues 99 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_837475.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837476.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_837477.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837478.1 residues 15 to 534 of 534 are 74.24 pct identical to residues 7 to 531 of 548 from GenPept : >emb|CAD02867.1| (AL627277) possible integrase [Salmonella enterica subsp. enterica serovar Typhi] NP_837479.1 residues 1 to 229 of 229 are 91.70 pct identical to residues 1 to 229 of 229 from GenPept : >gb|AAK16973.1|AE006460_11 (AE006460) Q antiterminator encoded by prophage CP-933P [Escherichia coli O157:H7 EDL933] NP_837480.1 residues 1 to 119 of 119 are 92.43 pct identical to residues 1 to 119 of 119 from GenPept : >gb|AAK16974.1|AE006460_12 (AE006460) endonuclease encoded by cryptic prophage CP-933P [Escherichia coli O157:H7 EDL933] NP_837481.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_837482.1 residues 1 to 275 of 275 are 89.81 pct identical to residues 1 to 275 of 275 from GenPept : >emb|CAC83523.1| (AJ298298) serine protease [Bacteriophage P27] NP_837483.1 residues 114 to 246 of 249 are 69.92 pct identical to residues 102 to 234 of 235 from GenPept : >emb|CAC83532.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837484.1 no significant similarities NP_837485.1 residues 1 to 80 of 80 are 85.00 pct identical to residues 1 to 80 of 80 from GenPept : >dbj|BAB36434.1| (AP002560) hypothetical protein [Escherichia coli O157:H7] NP_837486.1 residues 1 to 44 of 48 are 77.27 pct identical to residues 1 to 44 of 44 from GenPept : >gb|AAG57257.1|AE005444_7 (AE005444) unknown protein encoded within prophage CP-933V [Escherichia coli O157:H7 EDL933] NP_837487.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837488.1 residues 15 to 131 of 131 are 99.14 pct identical to residues 25 to 141 of 141 from Escherichia coli K-12 : B1869 NP_837489.1 residues 1 to 247 of 247 are 99.59 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B1870 NP_837490.1 residues 1 to 323 of 323 are 98.14 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B1871 NP_837491.1 residues 1 to 809 of 809 are 96.04 pct identical to residues 7 to 815 of 815 from Escherichia coli K-12 : B1872 NP_837492.1 residues 1 to 366 of 366 are 92.07 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B1873 NP_837493.1 residues 1 to 146 of 146 are 100.00 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B1874 NP_837494.1 residues 1 to 188 of 188 are 97.34 pct identical to residues 3 to 190 of 190 from Escherichia coli K-12 : B1875 NP_837495.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase NP_837496.1 residues 16 to 144 of 144 are 99.22 pct identical to residues 94 to 222 of 222 from GenPept : >gb|AAL72362.1| (AF386526) transposase [Shigella flexneri 2a]; partial NP_837497.1 residues 1 to 108 of 108 are 80.55 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72409.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837498.1 residues 1 to 112 of 112 are 98.21 pct identical to residues 1 to 112 of 130 from Escherichia coli K-12 : B1878 NP_837499.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export NP_837500.1 residues 1 to 128 of 152 are 40.90 pct identical to residues 1 to 122 of 465 from GenPept : >emb|CAD00870.1| (AL591984) similar to dGTP triphosphohydrolase [Listeria monocytogenes] NP_837501.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837503.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_837504.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation NP_837505.1 chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble NP_837506.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins NP_837507.1 methylates the MCP NP_837508.1 mediates taxis toward dipeptides NP_837509.1 residues 1 to 553 of 553 are 83.18 pct identical to residues 1 to 553 of 553 from Escherichia coli K-12 : B1886 NP_837510.1 residues 1 to 167 of 167 are 91.01 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B1887 NP_837511.1 chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component NP_837512.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_837513.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_837514.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems NP_837515.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837516.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837517.1 biosynthetic; catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate; expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature NP_837518.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose NP_837519.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose NP_837520.1 residues 1 to 167 of 167 are 100.00 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B1902 NP_837522.1 residues 1 to 107 of 107 are 88.78 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B1904 NP_837523.1 cytoplasmic iron storage protein NP_837524.1 residues 1 to 79 of 79 are 96.20 pct identical to residues 1 to 79 of 79 from Escherichia coli K-12 : B1906 NP_837525.1 residues 1 to 403 of 403 are 83.62 pct identical to residues 1 to 403 of 403 from Escherichia coli K-12 : B1907 NP_837526.1 residues 1 to 221 of 221 are 100.00 pct identical to residues 1 to 221 of 221 from Escherichia coli K-12 : B1908 NP_837527.1 residues 1 to 182 of 182 are 99.45 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B1912 NP_837528.2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision NP_837529.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system NP_837530.1 residues 1 to 74 of 74 are 100.00 pct identical to residues 1 to 74 of 74 from Escherichia coli K-12 : B1915 NP_837531.1 residues 1 to 207 of 208 are 96.13 pct identical to residues 1 to 207 of 240 from Escherichia coli K-12 : B1916 NP_837532.1 residues 1 to 250 of 250 are 89.60 pct identical to residues 1 to 250 of 250 from Escherichia coli K-12 : B1917 NP_837533.1 residues 1 to 222 of 222 are 85.58 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B1918 NP_837534.2 catalyzes the formation of pyruvate from D-cysteine NP_837535.1 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence NP_837536.1 structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes NP_837537.1 involved in flagellin assembly NP_837538.1 flagellin specific chaperone NP_837539.1 binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family NP_837540.1 converts 1,4-alpha-D-glucans to maltodextrin NP_837541.1 residues 16 to 137 of 137 are 99.18 pct identical to residues 16 to 137 of 137 from Escherichia coli K-12 : B1928 NP_837542.1 residues 1 to 401 of 401 are 86.78 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 : B1929 NP_837543.1 residues 1 to 77 of 77 are 100.00 pct identical to residues 1 to 77 of 77 from Escherichia coli K-12 : B1930 NP_837544.1 residues 1 to 268 of 268 are 97.76 pct identical to residues 135 to 402 of 402 from GenPept : >gb|AAG57523.1|AE005470_10 (AE005470) virulence protein [Escherichia coli O157:H7 EDL933] NP_837545.1 residues 1 to 360 of 360 are 84.65 pct identical to residues 1 to 365 of 365 from GenPept : >gb|AAA32301.1| (J02580) outer membrane porin protein [Bacteriophage PA-2] NP_837546.1 residues 1 to 245 of 245 are 100.00 pct identical to residues 1 to 245 of 245 from NRprotein_Feb03 : >ref|NP_707820.1| ARAC-type regulatory protein [Shigella flexneri 2a str. 301] gb|AAN43527.1|AE015216_2 ARAC-type regulatory protein [Shigella flexneri 2a str. 301] NP_837547.1 DLP12 prophage; similar to PEBP/RK1P protein family in eukaryotes that inhibits MEK phosphorylation by Raf-1; crystal structure suggests similar properties but exact function is unknown NP_837548.1 member of the small MDR (multidrug resistance) family of transporters; in Escherichia coli this protein provides resistance against a number of positively charged compounds including ethidium bromide and erythromycin; proton-dependent secondary transporter which exchanges protons for compound translocation NP_837549.1 forms a junction between the M-ring and FlgB during flagella biosynthesis NP_837550.1 One of three proteins involved in switching the direction of the flagellar rotation NP_837551.1 binds to and inhibits the function of flagella specific ATPase FliI NP_837552.1 involved in type III protein export during flagellum assembly NP_837553.1 residues 1 to 375 of 375 are 93.86 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B1943 NP_837554.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring NP_837555.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation NP_837556.1 One of three proteins involved in switching the direction of the flagellar rotation NP_837557.2 with FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus NP_837558.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus NP_837559.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus NP_837560.1 residues 1 to 207 of 207 are 99.51 pct identical to residues 1 to 207 of 207 from Escherichia coli K-12 : B1951 NP_837561.1 residues 1 to 62 of 62 are 98.38 pct identical to residues 1 to 62 of 62 from Escherichia coli K-12 : B1952 NP_837562.1 residues 1 to 75 of 75 are 98.66 pct identical to residues 6 to 80 of 80 from Escherichia coli K-12 : B1953 NP_837563.1 residues 1 to 60 of 60 are 98.33 pct identical to residues 1 to 60 of 60 from Escherichia coli K-12 : B1957 NP_837564.1 residues 23 to 305 of 305 are 87.98 pct identical to residues 23 to 305 of 305 from Escherichia coli K-12 : B1958 NP_837565.1 residues 1 to 306 of 306 are 83.33 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B1959 NP_837566.1 residues 1 to 156 of 156 are 98.07 pct identical to residues 1 to 156 of 156 from Escherichia coli K-12 : B1960 NP_837567.1 residues 1 to 472 of 472 are 99.15 pct identical to residues 1 to 472 of 472 from Escherichia coli K-12 : B1961 NP_837568.1 residues 1 to 270 of 270 are 95.55 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445) transposase B [Pantoea agglomerans] NP_837569.1 residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445) transposase A [Pantoea agglomerans] NP_837570.1 residues 31 to 267 of 295 are 59.18 pct identical to residues 53 to 296 of 351 from GenPept : >emb|CAA23605.1| (V00316) phoE protein [Escherichia coli] NP_837571.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837572.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837573.1 residues 2 to 69 of 69 are 61.76 pct identical to residues 298 to 359 of 359 from GenPept : >emb|CAA09665.1| (AJ011501) OmpK35 porin [Klebsiella pneumoniae] NP_837574.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837575.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837576.1 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress NP_837577.1 residues 1 to 452 of 452 are 93.14 pct identical to residues 1 to 452 of 452 from Escherichia coli K-12 : B1968 NP_837578.1 induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistance to copper and several drugs when induced NP_837579.1 residues 1 to 137 of 137 are 99.27 pct identical to residues 1 to 137 of 137 from Escherichia coli K-12 : B1970 NP_837580.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme NP_837581.1 residues 2 to 205 of 217 are 92.64 pct identical to residues 1 to 204 of 216 from Escherichia coli K-12 : B1973 NP_837582.1 residues 1 to 77 of 89 are 92.20 pct identical to residues 1 to 77 of 82 from GenPept : >gb|AAG56015.1|AE005334_2 (AE005334) unknown protein encoded by prophage CP-933X [Escherichia coli O157:H7 EDL933] NP_837583.1 residues 1 to 547 of 547 are 72.48 pct identical to residues 1 to 565 of 565 from NRprotein_Feb03 : >ref|NP_085238.1| invasion plasmid antigen [Shigella flexneri] emb|CAC05787.1| IpaH7.8, member of the IpaH family, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri] NP_837584.1 residues 1 to 125 of 125 are 68.80 pct identical to residues 64 to 188 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837585.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837586.1 residues 1 to 97 of 97 are 82.47 pct identical to residues 71 to 167 of 167 from GenPept : >gb|AAK18549.1|AF348706_238 (AF348706) iso-IS1 orfB [Shigella flexneri] NP_837587.1 residues 1 to 649 of 649 are 85.20 pct identical to residues 1 to 649 of 649 from GenPept : >emb|CAC83565.1| (AJ298298) tail protein [Bacteriophage P27] NP_837588.1 residues 3 to 111 of 111 are 97.24 pct identical to residues 1 to 109 of 109 from GenPept : >emb|CAC83564.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837589.1 residues 1 to 118 of 118 are 98.30 pct identical to residues 1 to 118 of 118 from GenPept : >emb|CAC83563.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837590.1 residues 1 to 498 of 498 are 91.16 pct identical to residues 1 to 498 of 498 from GenPept : >emb|CAC83562.1| (AJ298298) sheath protein [Bacteriophage P27] NP_837591.1 residues 1 to 83 of 84 are 98.79 pct identical to residues 104 to 186 of 187 from GenPept : >emb|CAC83561.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837592.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837593.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837594.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706) IS orf [Shigella flexneri]; partial NP_837595.1 residues 1 to 165 of 165 are 99.39 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837596.1 residues 1 to 227 of 227 are 92.95 pct identical to residues 1 to 227 of 229 from GenPept : >gb|AAK16973.1|AE006460_11 (AE006460) Q antiterminator encoded by prophage CP-933P [Escherichia coli O157:H7 EDL933] NP_837597.1 residues 4 to 121 of 121 are 96.61 pct identical to residues 2 to 119 of 119 from GenPept : >gb|AAK16974.1|AE006460_12 (AE006460) endonuclease encoded by cryptic prophage CP-933P [Escherichia coli O157:H7 EDL933] NP_837598.1 residues 1 to 324 of 328 are 79.32 pct identical to residues 25 to 347 of 348 from GenPept : >dbj|BAB35199.1| (AP002556) hypothetical protein [Escherichia coli O157:H7] NP_837599.1 residues 53 to 159 of 159 are 96.26 pct identical to residues 1 to 107 of 107 from GenPept : >gb|AAG57026.1|AE005422_1 (AE005422) unknown protein encoded within prophage CP-933U [Escherichia coli O157:H7 EDL933] NP_837600.1 residues 1 to 70 of 70 are 81.42 pct identical to residues 1 to 70 of 70 from GenPept : >gb|AAK16976.1|AE006461_1 (AE006461) cell killing protein encoded within cryptic prophage CP-933P [Escherichia coli O157:H7 EDL933] NP_837601.1 residues 4 to 93 of 111 are 37.25 pct identical to residues 28 to 122 of 151 from GenPept : >dbj|BAB12619.1| (AP002527) ycgB [Escherichia coli] NP_837602.1 residues 1 to 40 of 40 are 85.00 pct identical to residues 28 to 67 of 67 from GenPept : >dbj|BAB36195.1| (AP002559) hypothetical protein [Escherichia coli O157:H7] NP_837603.1 residues 1 to 281 of 281 are 93.23 pct identical to residues 60 to 340 of 340 from GenPept : >gb|AAG57039.1|AE005423_1 (AE005423) integrase for prophage CP-933U [Escherichia coli O157:H7 EDL933] NP_837604.1 residues 1 to 278 of 278 are 98.92 pct identical to residues 1 to 278 of 278 from Escherichia coli K-12 : B1976 NP_837605.1 residues 1 to 249 of 249 are 95.18 pct identical to residues 56 to 304 of 304 from GenPept : >emb|CAB59975.1| (AJ245585) integrase [Escherichia coli] NP_837606.1 residues 1 to 76 of 76 are 98.68 pct identical to residues 37 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_837607.1 residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAK18566.1|AF348706_255 (AF348706) IS600 orfA [Shigella flexneri] NP_837608.1 residues 1 to 237 of 237 are 99.57 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72454.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837609.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile NP_837610.1 residues 1 to 238 of 238 are 99.57 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B1983 NP_837611.1 LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB NP_837612.1 Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation NP_837613.1 residues 2 to 311 of 311 are 97.41 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 : B1990 NP_837614.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole NP_837615.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole NP_837616.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837617.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_837618.1 residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837619.1 residues 1 to 215 of 215 are 99.06 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a] NP_837620.1 residues 1 to 131 of 131 are 100.00 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B2007 NP_837621.1 residues 1 to 224 of 224 are 100.00 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837622.1 residues 1 to 57 of 70 are 100.00 pct identical to residues 1 to 57 of 115 from GenPept : >gb|AAL72465.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837623.1 residues 1 to 172 of 172 are 98.83 pct identical to residues 35 to 206 of 206 from GenPept : >gb|AAD44736.1|AF141323_7 (AF141323) TnpC [Shigella flexneri] NP_837624.1 residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from GenPept : >gb|AAK18555.1|AF348706_244 (AF348706) IS629 orf [Shigella flexneri] NP_837625.1 residues 1 to 533 of 533 are 97.37 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837626.1 residues 13 to 95 of 104 are 34.88 pct identical to residues 325 to 410 of 416 from GenPept : >gb|AAL09885.1| (AY048727) integrase [CRIM helper plasmid pAH129] NP_837627.1 residues 1 to 82 of 82 are 97.56 pct identical to residues 452 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_837628.1 residues 1 to 190 of 190 are 93.15 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAK18527.1|AF348706_216 (AF348706) IS orf [Shigella flexneri] NP_837629.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAL72462.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837630.1 residues 1 to 165 of 165 are 99.39 pct identical to residues 60 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837631.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates NP_837632.1 residues 1 to 75 of 75 are 97.33 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B2012 NP_837633.1 residues 1 to 352 of 352 are 93.18 pct identical to residues 1 to 352 of 352 from Escherichia coli K-12 : B2013 NP_837634.1 residues 1 to 452 of 452 are 89.82 pct identical to residues 3 to 454 of 454 from Escherichia coli K-12 : B2014 NP_837635.1 residues 1 to 309 of 327 are 99.35 pct identical to residues 8 to 316 of 316 from Escherichia coli K-12 : B2015 NP_837636.1 residues 1 to 274 of 274 are 94.52 pct identical to residues 1 to 274 of 274 from Escherichia coli K-12 : B2016 NP_837637.1 residues 1 to 97 of 97 are 82.47 pct identical to residues 71 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_837638.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837639.1 Antitoxin that counteracts the effect of the YoeB toxin NP_837640.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors NP_837641.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer NP_837642.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis NP_837643.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate NP_837644.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide NP_837645.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide NP_837646.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase NP_837647.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis NP_837648.1 residues 1 to 337 of 337 are 82.24 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 : B2027 NP_837649.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate NP_837650.1 residues 1 to 119 of 119 are 100.00 pct identical to residues 1 to 119 of 119 from GenPept : >emb|CAA50780.1| (X71970) ORG12x8 [Shigella flexneri] NP_837651.1 residues 1 to 183 of 183 are 100.00 pct identical to residues 1 to 183 of 183 from GenPept : >emb|CAA50779.1| (X71970) ORG12x3 [Shigella flexneri] NP_837652.1 residues 1 to 199 of 199 are 88.94 pct identical to residues 1 to 199 of 199 from GenPept : >emb|CAA50778.1| (X71970) ORF11x6 [Shigella flexneri] NP_837653.1 residues 1 to 163 of 163 are 100.00 pct identical to residues 1 to 163 of 163 from GenPept : >emb|CAA50777.1| (X71970) ORF10x9 [Shigella flexneri] NP_837654.1 residues 1 to 70 of 129 are 100.00 pct identical to residues 1 to 70 of 76 from GenPept : >emb|CAA50776.1| (X71970) rfbJ [Shigella flexneri] NP_837655.1 residues 1 to 124 of 124 are 89.51 pct identical to residues 1 to 124 of 124 from GenPept : >emb|CAA50775.1| (X71970) rfbI [Shigella flexneri] NP_837656.1 residues 1 to 382 of 382 are 76.43 pct identical to residues 1 to 382 of 382 from GenPept : >emb|CAA50774.1| (X71970) rfc [Shigella flexneri] NP_837657.1 residues 1 to 289 of 289 are 100.00 pct identical to residues 1 to 289 of 289 from GenPept : >emb|CAA50773.1| (X71970) rfbG [Shigella flexneri] NP_837658.1 residues 1 to 296 of 296 are 100.00 pct identical to residues 1 to 296 of 296 from GenPept : >emb|CAA50772.1| (X71970) rfbF [Shigella flexneri] NP_837659.1 residues 1 to 418 of 418 are 99.52 pct identical to residues 1 to 418 of 418 from GenPept : >emb|CAA50771.1| (X71970) rfbE [Shigella flexneri] NP_837660.1 residues 1 to 181 of 181 are 97.95 pct identical to residues 1 to 181 of 181 from GenPept : >emb|CAA50770.1| (X71970) rfbD [Shigella flexneri]; This protein is named RfbC in SW|P37780|, RfbD in >emb|CAA50770.1| NP_837661.1 residues 1 to 290 of 292 are 93.79 pct identical to residues 1 to 290 of 293 from Escherichia coli K-12 : B2039 NP_837662.1 with dTDP-4-dehydrorhamnose 3,5-epimerase forms a complex known as dTDP-L-rhamnose synthetase; catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose NP_837663.1 NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose NP_837664.1 together with GalU subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose NP_837665.1 WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid NP_837666.1 residues 1 to 406 of 406 are 97.29 pct identical to residues 1 to 406 of 406 from Escherichia coli K-12 : B2044 NP_837667.1 residues 1 to 426 of 426 are 98.12 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 : B2045 NP_837668.1 residues 1 to 492 of 492 are 98.57 pct identical to residues 1 to 492 of 492 from Escherichia coli K-12 : B2046 NP_837669.1 WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid NP_837670.1 residues 1 to 456 of 456 are 99.12 pct identical to residues 1 to 456 of 456 from Escherichia coli K-12 : B2048 NP_837671.1 residues 1 to 478 of 478 are 91.84 pct identical to residues 1 to 478 of 478 from Escherichia coli K-12 : B2049 NP_837672.1 residues 1 to 407 of 407 are 95.57 pct identical to residues 1 to 407 of 407 from Escherichia coli K-12 : B2050 NP_837673.1 residues 1 to 159 of 159 are 96.85 pct identical to residues 2 to 160 of 160 from Escherichia coli K-12 : B2051 NP_837674.1 residues 1 to 321 of 322 are 98.44 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B2052 NP_837675.1 residues 1 to 373 of 373 are 100.00 pct identical to residues 1 to 373 of 373 from Escherichia coli K-12 : B2053 NP_837676.1 acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit) NP_837677.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837678.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837679.1 acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium NP_837680.2 Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide) NP_837681.1 Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis NP_837682.1 residues 13 to 379 of 379 are 99.72 pct identical to residues 13 to 379 of 379 from Escherichia coli K-12 : B2062 NP_837683.1 residues 1 to 527 of 527 are 95.82 pct identical to residues 23 to 549 of 549 from Escherichia coli K-12 : B2063 NP_837684.1 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs NP_837685.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis NP_837686.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor NP_837687.1 residues 1 to 398 of 398 are 91.20 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAL72392.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837688.1 inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine NP_837689.1 residues 1 to 251 of 253 are 90.43 pct identical to residues 1 to 251 of 253 from Escherichia coli K-12 : B2072 NP_837690.1 residues 1 to 219 of 219 are 90.41 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B2073 NP_837691.1 residues 1 to 398 of 398 are 87.43 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAL72391.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837692.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate NP_837693.1 residues 1 to 471 of 471 are 85.56 pct identical to residues 1 to 471 of 471 from Escherichia coli K-12 : B2077 NP_837694.1 residues 1 to 467 of 467 are 95.07 pct identical to residues 1 to 467 of 467 from Escherichia coli K-12 : B2078 NP_837695.1 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport NP_837696.1 residues 1 to 123 of 123 are 98.37 pct identical to residues 1 to 123 of 123 from Escherichia coli K-12 : B2080 NP_837697.1 residues 1 to 453 of 453 are 96.46 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 : B2081 NP_837698.1 residues 1 to 125 of 125 are 87.19 pct identical to residues 1 to 125 of 125 from Escherichia coli K-12 : B2085 NP_837699.1 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role NP_837700.1 residues 1 to 259 of 259 are 99.22 pct identical to residues 1 to 259 of 259 from NRprotein_Feb03 : >ref|NP_416591.1| Galactitol utilization operon repressor [Escherichia coli K12] sp|P36930|GATR_ECOLI Galactitol utilization operon repressor NP_837701.1 Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate NP_837702.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837703.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837704.1 residues 1 to 451 of 451 are 91.35 pct identical to residues 1 to 451 of 451 from Escherichia coli K-12 : B2092 NP_837705.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_837706.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_837707.1 residues 1 to 420 of 420 are 98.57 pct identical to residues 1 to 420 of 420 from Escherichia coli K-12 : B2095 NP_837708.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway NP_837709.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate NP_837710.1 residues 1 to 321 of 321 are 88.16 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B2100 NP_837711.1 residues 1 to 248 of 248 are 100.00 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B2101 NP_837712.1 residues 1 to 270 of 273 are 94.44 pct identical to residues 4 to 273 of 275 from Escherichia coli K-12 : B2102 NP_837713.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine NP_837714.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP NP_837715.1 residues 1 to 90 of 90 are 100.00 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B2105 NP_837716.1 residues 1 to 826 of 826 are 97.94 pct identical to residues 1 to 826 of 826 from Escherichia coli K-12 : B2109 NP_837717.1 residues 1 to 174 of 174 are 85.00 pct identical to residues 1 to 180 of 180 from Escherichia coli K-12 : B2111 NP_837718.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837719.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837720.1 residues 1 to 93 of 93 are 94.62 pct identical to residues 1 to 93 of 93 from Escherichia coli K-12 : B2112 NP_837721.1 residues 1 to 369 of 369 are 96.47 pct identical to residues 11 to 379 of 379 from Escherichia coli K-12 : B2113 NP_837722.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content NP_837723.1 residues 1 to 384 of 384 are 98.95 pct identical to residues 1 to 384 of 384 from Escherichia coli K-12 : B2119 NP_837724.1 residues 1 to 759 of 759 are 89.32 pct identical to residues 1 to 759 of 759 from Escherichia coli K-12 : B2120 NP_837725.1 residues 1 to 378 of 378 are 98.94 pct identical to residues 1 to 378 of 378 from Escherichia coli K-12 : B2121 NP_837726.1 residues 1 to 615 of 667 are 87.64 pct identical to residues 9 to 622 of 622 from Escherichia coli K-12 : B2122 NP_837727.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837728.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837729.1 residues 1 to 153 of 153 are 89.54 pct identical to residues 5 to 157 of 157 from Escherichia coli K-12 : B2123 NP_837730.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837731.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837732.1 unknown function; when overproduced it confers drug-resistance NP_837733.1 residues 1 to 561 of 561 are 95.90 pct identical to residues 1 to 561 of 561 from Escherichia coli K-12 : B2126 NP_837734.1 residues 1 to 82 of 82 are 96.34 pct identical to residues 1 to 82 of 82 from GenPept : >gb|AAG57731.1|AE005491_11 (AE005491) Z3916 gene product [Escherichia coli O157:H7 EDL933] NP_837735.1 residues 1 to 77 of 89 are 92.20 pct identical to residues 1 to 77 of 82 from GenPept : >gb|AAG56015.1|AE005334_2 (AE005334) unknown protein encoded by prophage CP-933X [Escherichia coli O157:H7 EDL933] NP_837736.1 residues 5 to 146 of 181 are 60.56 pct identical to residues 24 to 165 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_837737.1 residues 1 to 435 of 444 are 39.22 pct identical to residues 35 to 488 of 490 from GenPept : >emb|CAC83574.1| (AJ298298) tail fiber protein [Bacteriophage P27] NP_837738.1 residues 9 to 162 of 162 are 75.97 pct identical to residues 29 to 182 of 182 from GenPept : >emb|CAC83573.1| (AJ298298) tail fiber assembly protein [Bacteriophage P27] NP_837739.1 residues 3 to 36 of 36 are 76.47 pct identical to residues 525 to 558 of 558 from GenPept : >dbj|BAA00552.1| (D00660) Bcv gene product [Shigella boydii] NP_837740.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837741.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837742.1 residues 1 to 108 of 108 are 89.81 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL72412.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837743.1 residues 1 to 215 of 215 are 98.13 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; partial NP_837744.1 no significant similarities NP_837745.1 residues 1 to 35 of 35 are 88.57 pct identical to residues 1 to 35 of 35 from GenPept : >gb|AAL21065.1| (AE008796) inner membrane protein [Salmonella typhimurium LT2] NP_837746.1 residues 1 to 243 of 243 are 88.47 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B2128 NP_837747.1 residues 1 to 308 of 308 are 94.48 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B2129 NP_837748.1 residues 1 to 385 of 385 are 77.66 pct identical to residues 1 to 385 of 385 from Escherichia coli K-12 : B2130 NP_837749.1 residues 1 to 305 of 305 are 97.70 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 : B2131 NP_837750.1 residues 1 to 765 of 765 are 99.21 pct identical to residues 1 to 765 of 765 from Escherichia coli K-12 : B2132; periplasmic NP_837751.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent NP_837752.2 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7 NP_837753.1 residues 1 to 195 of 195 are 92.30 pct identical to residues 9 to 203 of 203 from Escherichia coli K-12 : B2135 NP_837754.1 residues 1 to 204 of 204 are 84.31 pct identical to residues 1 to 204 of 204 from Escherichia coli K-12 : B2136 NP_837755.1 residues 1 to 315 of 315 are 99.36 pct identical to residues 1 to 315 of 315 from Escherichia coli K-12 : B2140 NP_837756.1 residues 1 to 132 of 132 are 81.81 pct identical to residues 1 to 132 of 132 from Escherichia coli K-12 : B2141 NP_837757.1 residues 1 to 231 of 231 are 93.50 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B2142 NP_837758.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis NP_837759.1 residues 1 to 239 of 239 are 92.46 pct identical to residues 1 to 239 of 239 from Escherichia coli K-12 : B2144 NP_837760.1 residues 1 to 79 of 79 are 86.07 pct identical to residues 1 to 79 of 79 from Escherichia coli K-12 : B2145 NP_837761.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain NP_837762.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex NP_837763.1 with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains NP_837764.1 residues 1 to 332 of 332 are 95.48 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B2150 NP_837765.1 negative regulator of the mglBAC operon for galactose utilization NP_837766.1 residues 1 to 358 of 358 are 79.74 pct identical to residues 1 to 385 of 385 from Escherichia coli K-12 : B2152 NP_837767.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer NP_837768.1 residues 1 to 489 of 489 are 96.93 pct identical to residues 1 to 489 of 489 from Escherichia coli K-12 : B2156 NP_837769.1 residues 1 to 293 of 293 are 93.85 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B2157 NP_837770.1 residues 1 to 349 of 349 are 84.81 pct identical to residues 1 to 349 of 349 from Escherichia coli K-12 : B2158 NP_837771.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues NP_837772.1 residues 1 to 362 of 362 are 97.79 pct identical to residues 1 to 362 of 362 from Escherichia coli K-12 : B2160 NP_837773.1 residues 1 to 416 of 416 are 95.67 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B2161 NP_837774.1 Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively NP_837775.1 activator of nucleoside metabolism NP_837776.1 residues 1 to 416 of 416 are 93.99 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B2164 NP_837777.1 residues 1 to 312 of 312 are 97.75 pct identical to residues 1 to 312 of 312 from Escherichia coli K-12 : B2165 NP_837778.1 residues 1 to 313 of 313 are 98.72 pct identical to residues 1 to 313 of 313 from Escherichia coli K-12 : B2166 NP_837779.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_837780.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers NP_837781.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr NP_837782.1 residues 1 to 388 of 392 are 94.32 pct identical to residues 1 to 388 of 393 from Escherichia coli K-12 : B2170 NP_837783.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837784.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837785.2 Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein NP_837786.1 residues 1 to 488 of 488 are 97.95 pct identical to residues 1 to 488 of 488 from Escherichia coli K-12 : B2172 NP_837787.1 residues 1 to 328 of 328 are 96.03 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B2173 NP_837788.1 residues 1 to 237 of 237 are 98.73 pct identical to residues 13 to 249 of 249 from Escherichia coli K-12 : B2174 NP_837789.1 by similarity, Spr seems to have peptidase activity; involved in thermoresistance NP_837790.1 residues 1 to 518 of 518 are 99.03 pct identical to residues 1 to 518 of 518 from Escherichia coli K-12 : B2176 NP_837791.1 residues 1 to 604 of 604 are 98.17 pct identical to residues 3 to 606 of 606 from Escherichia coli K-12 : B2177 NP_837792.1 residues 1 to 364 of 364 are 95.32 pct identical to residues 1 to 364 of 364 from Escherichia coli K-12 : B2178 NP_837793.1 residues 1 to 341 of 341 are 93.84 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 : B2179 NP_837794.1 residues 1 to 529 of 529 are 98.86 pct identical to residues 1 to 529 of 529 from Escherichia coli K-12 : B2180 NP_837795.1 residues 1 to 114 of 114 are 100.00 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 : B2181 NP_837796.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance NP_837797.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA NP_837798.1 residues 1 to 586 of 586 are 96.58 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 : B2184 NP_837799.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response NP_837800.1 residues 1 to 335 of 335 are 92.83 pct identical to residues 1 to 335 of 335 from Escherichia coli K-12 : B2186 NP_837801.1 residues 1 to 75 of 75 are 97.33 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B2187 NP_837802.1 residues 1 to 586 of 586 are 93.85 pct identical to residues 1 to 586 of 586 from Escherichia coli K-12 : B2188 NP_837803.1 residues 1 to 836 of 836 are 95.09 pct identical to residues 1 to 836 of 836 from Escherichia coli K-12 : B2190 NP_837804.1 nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes NP_837805.1 residues 1 to 350 of 350 are 95.42 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B2194 NP_837806.1 residues 1 to 185 of 185 are 79.45 pct identical to residues 1 to 185 of 185 from Escherichia coli K-12 : B2195 NP_837807.1 residues 1 to 647 of 647 are 90.41 pct identical to residues 1 to 647 of 647 from Escherichia coli K-12 : B2196 NP_837808.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane NP_837809.1 residues 1 to 50 of 69 are 63.99 pct identical to residues 1 to 50 of 69 from Escherichia coli K-12 : B2198 NP_837810.1 residues 1 to 245 of 245 are 100.00 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B2199 NP_837811.1 residues 1 to 220 of 220 are 65.45 pct identical to residues 1 to 220 of 220 from Escherichia coli K-12 : B2200 NP_837812.1 ATP-binding protein; required for proper cytochrome c maturation NP_837813.1 with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone NP_837814.1 small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA NP_837815.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA NP_837816.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway NP_837817.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC NP_837818.1 residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from Escherichia coli K-12 : B2207 NP_837819.1 Predicted role in electron transfer to the periplasmic nitrate reductase NapA. NP_837820.1 residues 1 to 162 of 162 are 90.12 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B2209 NP_837821.1 efflux pump for the antibacterial peptide microcin J25 NP_837822.1 residues 1 to 216 of 216 are 98.61 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 : B2212 NP_837823.1 residues 1 to 354 of 354 are 92.37 pct identical to residues 1 to 354 of 354 from Escherichia coli K-12 : B2213 NP_837824.1 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway NP_837825.1 allows for ions and hydrophilic solutes to cross the outer membrane NP_837826.1 residues 1 to 890 of 890 are 92.47 pct identical to residues 1 to 890 of 890 from Escherichia coli K-12 : B2216 NP_837827.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF NP_837828.1 residues 17 to 949 of 949 are 94.31 pct identical to residues 1 to 933 of 933 from Escherichia coli K-12 : B2218 NP_837829.1 residues 1 to 258 of 258 are 94.18 pct identical to residues 1 to 258 of 258 from Escherichia coli K-12 : B2225 NP_837830.1 residues 1 to 549 of 549 are 97.08 pct identical to residues 1 to 549 of 549 from Escherichia coli K-12 : B2226 NP_837831.1 residues 12 to 171 of 171 are 99.37 pct identical to residues 2 to 161 of 161 from Escherichia coli K-12 : B2227 NP_837832.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a]; partial NP_837833.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837834.1 residues 1 to 207 of 207 are 98.55 pct identical to residues 10 to 216 of 216 from Escherichia coli K-12 : B2229 NP_837835.1 negatively supercoils closed circular double-stranded DNA NP_837836.1 Involved in ubiquinone biosynthesis NP_837837.1 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_837838.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_837839.1 Catalyzes the rate-limiting step in dNTP synthesis NP_837840.2 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA NP_837841.1 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases NP_837842.1 residues 1 to 216 of 216 are 98.61 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 : B2237 NP_837843.1 residues 1 to 68 of 68 are 97.05 pct identical to residues 1 to 68 of 68 from Escherichia coli K-12 : B2238 NP_837844.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic NP_837845.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell NP_837846.1 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor NP_837847.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters NP_837848.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate NP_837849.1 residues 1 to 311 of 316 are 90.03 pct identical to residues 1 to 295 of 299 from Escherichia coli K-12 : B2244 NP_837850.1 residues 4 to 156 of 156 are 77.77 pct identical to residues 115 to 267 of 267 from Escherichia coli K-12 : B2245 NP_837851.1 residues 1 to 400 of 400 are 96.24 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B2249 NP_837852.1 residues 1 to 180 of 180 are 87.77 pct identical to residues 8 to 187 of 187 from Escherichia coli K-12 : B2250 NP_837853.1 residues 1 to 120 of 120 are 80.00 pct identical to residues 22 to 141 of 141 from Escherichia coli K-12 : B2251 NP_837854.1 residues 1 to 192 of 192 are 90.62 pct identical to residues 9 to 200 of 200 from Escherichia coli K-12 : B2252 NP_837855.2 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose NP_837856.1 catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate NP_837857.1 residues 1 to 516 of 516 are 98.83 pct identical to residues 145 to 660 of 660 from Escherichia coli K-12 : B2255 NP_837858.1 residues 1 to 296 of 296 are 95.27 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B2256 NP_837859.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A NP_837860.1 residues 1 to 477 of 477 are 99.16 pct identical to residues 1 to 477 of 477 from GenPept : >gb|AAC33123.1| (AF084030) sucrose hydrolase [Escherichia coli] NP_837861.2 residues 1 to 222 of 222 are 86.03 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B2258 NP_837862.1 residues 1 to 451 of 451 are 92.90 pct identical to residues 1 to 451 of 451 from Escherichia coli K-12 : B2260 NP_837863.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate NP_837864.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA NP_837865.1 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA NP_837866.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis NP_837867.2 synthesizes isochorismate acid from chorismate NP_837868.1 residues 1 to 84 of 101 are 77.38 pct identical to residues 1 to 84 of 101 from Escherichia coli K-12 : B2266 NP_837869.1 residues 1 to 153 of 153 are 100.00 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 : B2267 NP_837870.2 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions NP_837871.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837872.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_837873.2 Catalyzes the transfer of electrons from NADH to quinone NP_837874.1 Catalyzes the transfer of electrons from NADH to quinone NP_837875.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_837876.1 Catalyzes the transfer of electrons from NADH to quinone NP_837877.1 Catalyzes the transfer of electrons from NADH to quinone NP_837878.1 Catalyzes the transfer of electrons from NADH to quinone NP_837879.1 Catalyzes the transfer of electrons from NADH to quinone NP_837880.1 Catalyzes the transfer of electrons from NADH to quinone NP_837881.1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase NP_837882.1 Catalyzes the transfer of electrons from NADH to quinone NP_837883.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms NP_837884.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen NP_837885.1 Catalyzes the transfer of electrons from NADH to quinone NP_837886.1 residues 1 to 312 of 312 are 91.98 pct identical to residues 1 to 312 of 312 from Escherichia coli K-12 : B2289 NP_837887.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor NP_837888.1 residues 1 to 199 of 199 are 98.99 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B2291 NP_837889.1 residues 1 to 610 of 610 are 90.49 pct identical to residues 1 to 610 of 610 from Escherichia coli K-12 : B2292 NP_837890.1 residues 1 to 216 of 216 are 93.05 pct identical to residues 7 to 222 of 222 from Escherichia coli K-12 : B2293 NP_837891.1 residues 1 to 164 of 164 are 98.78 pct identical to residues 7 to 170 of 170 from Escherichia coli K-12 : B2294 NP_837892.1 residues 1 to 151 of 151 are 99.33 pct identical to residues 1 to 151 of 151 from Escherichia coli K-12 : B2295 NP_837893.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA NP_837894.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate NP_837895.2 residues 1 to 513 of 513 are 99.80 pct identical to residues 1 to 513 of 513 from Escherichia coli K-12 : B2298 NP_837896.1 residues 1 to 180 of 180 are 91.11 pct identical to residues 1 to 180 of 180 from Escherichia coli K-12 : B2299 NP_837897.1 residues 1 to 183 of 183 are 97.81 pct identical to residues 2 to 184 of 184 from Escherichia coli K-12 : B2300 NP_837898.1 residues 1 to 214 of 214 are 99.53 pct identical to residues 1 to 214 of 214 from Escherichia coli K-12 : B2301 NP_837899.1 residues 1 to 215 of 215 are 99.06 pct identical to residues 1 to 215 of 215 from Escherichia coli K-12 : B2302 NP_837900.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate NP_837901.1 residues 1 to 297 of 297 are 99.32 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B2304 NP_837902.1 residues 1 to 296 of 296 are 98.64 pct identical to residues 1 to 296 of 296 from Escherichia coli K-12 : B2305 NP_837903.1 residues 1 to 257 of 257 are 95.71 pct identical to residues 1 to 257 of 257 from Escherichia coli K-12 : B2306 NP_837904.1 residues 1 to 238 of 238 are 87.81 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B2307 NP_837905.1 residues 1 to 228 of 228 are 89.47 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B2308 NP_837906.1 residues 1 to 260 of 260 are 91.92 pct identical to residues 1 to 260 of 260 from Escherichia coli K-12 : B2309 NP_837907.1 residues 1 to 260 of 260 are 91.15 pct identical to residues 1 to 260 of 260 from Escherichia coli K-12 : B2310 NP_837908.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate NP_837909.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway NP_837910.1 membrane protein required for colicin V production NP_837911.2 residues 1 to 211 of 211 are 67.77 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B2314 NP_837912.1 residues 1 to 422 of 422 are 92.89 pct identical to residues 1 to 422 of 422 from Escherichia coli K-12 : B2315 NP_837913.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits NP_837914.1 residues 1 to 210 of 219 are 90.95 pct identical to residues 1 to 210 of 219 from Escherichia coli K-12 : B2317 NP_837915.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability NP_837916.1 residues 1 to 337 of 337 are 87.53 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B2319 NP_837917.1 catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate NP_837918.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein NP_837919.1 residues 1 to 392 of 392 are 83.16 pct identical to residues 1 to 392 of 392 from Escherichia coli K-12 : B2322 NP_837920.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_837921.2 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules NP_837922.1 residues 1 to 91 of 92 are 100.00 pct identical to residues 1 to 91 of 92 from Escherichia coli K-12 : B2325 NP_837923.1 residues 1 to 182 of 182 are 98.90 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B2326 NP_837924.1 residues 1 to 269 of 269 are 95.53 pct identical to residues 1 to 269 of 269 from Escherichia coli K-12 : B2327 NP_837925.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm NP_837926.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis NP_837927.1 involved in methylation of ribosomal protein L3 NP_837928.1 residues 1 to 183 of 183 are 100.00 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B2331 NP_837929.1 residues 1 to 187 of 187 are 83.95 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B2339 NP_837930.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_837931.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_837932.1 residues 1 to 161 of 161 are 99.37 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B2340 NP_837933.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate NP_837934.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth NP_837935.1 residues 1 to 102 of 102 are 86.27 pct identical to residues 1 to 102 of 102 from Escherichia coli K-12 : B2343 NP_837936.1 residues 1 to 446 of 446 are 99.55 pct identical to residues 3 to 448 of 448 from Escherichia coli K-12 : B2344; sensitivity to phage t2 NP_837937.1 residues 1 to 352 of 352 are 88.92 pct identical to residues 1 to 352 of 352 from Escherichia coli K-12 : B2345 NP_837938.1 residues 1 to 251 of 251 are 99.20 pct identical to residues 1 to 251 of 251 from Escherichia coli K-12 : B2346 NP_837939.1 residues 1 to 273 of 273 are 87.17 pct identical to residues 38 to 310 of 310 from Escherichia coli K-12 : B2347 NP_837940.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_837941.1 residues 1 to 191 of 201 are 90.76 pct identical to residues 7 to 201 of 439 from GenPept : >gb|AAK18553.1|AF348706_242 (AF348706) IS4 orf [Shigella flexneri]; partial NP_837942.1 residues 1 to 111 of 111 are 79.27 pct identical to residues 1 to 111 of 111 from GenPept : >gb|AAG57389.1|AE005458_6 (AE005458) Z3516 gene product [Escherichia coli O157:H7 EDL933] NP_837943.1 residues 22 to 352 of 352 are 96.37 pct identical to residues 1 to 331 of 331 from GenPept : >emb|CAA57220.1| (X81461) sucrose specific repressor [Escherichia coli] NP_837944.1 catalyzes the formation of pyruvate from serine NP_837945.1 residues 1 to 512 of 512 are 89.25 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B2367 NP_837946.1 residues 1 to 387 of 387 are 94.83 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B2368 NP_837947.1 response regulator in two-component regulatory system with EvgS; phosphorylated EvgA activates ompC, emrKY, gadABC, hdeAB and others genes; involved in acid resistance, osmotic adaption, and drug resistance NP_837948.1 residues 1 to 1197 of 1197 are 94.23 pct identical to residues 1 to 1197 of 1197 from Escherichia coli K-12 : B2370 NP_837949.2 residues 1 to 381 of 381 are 98.42 pct identical to residues 14 to 394 of 394 from Escherichia coli K-12 : B2371 NP_837950.1 catalyzes the formation of formyl-CoA from oxalyl-CoA NP_837951.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA NP_837952.1 residues 1 to 207 of 207 are 90.99 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B2375 NP_837953.1 residues 17 to 91 of 91 are 92.00 pct identical to residues 17 to 91 of 91 from Escherichia coli K-12 : B2376 NP_837954.1 residues 1 to 80 of 80 are 98.75 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B2377 NP_837955.2 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock NP_837956.1 residues 1 to 412 of 412 are 99.27 pct identical to residues 1 to 412 of 412 from Escherichia coli K-12 : B2379 NP_837957.1 residues 1 to 244 of 244 are 93.03 pct identical to residues 1 to 244 of 244 from Escherichia coli K-12 : B2381 NP_837958.1 residues 1 to 190 of 190 are 97.89 pct identical to residues 1 to 190 of 285 from Escherichia coli K-12 : B2382 NP_837959.1 residues 1 to 831 of 831 are 95.54 pct identical to residues 1 to 831 of 831 from Escherichia coli K-12 : B2383 NP_837960.1 metalloprotein NP_837961.1 residues 1 to 415 of 415 are 93.25 pct identical to residues 1 to 415 of 415 from Escherichia coli K-12 : B2386 NP_837962.1 residues 1 to 108 of 108 are 88.88 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B2387 NP_837963.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate NP_837964.1 residues 1 to 418 of 418 are 77.27 pct identical to residues 1 to 418 of 418 from Escherichia coli K-12 : B2389 NP_837965.1 residues 1 to 91 of 108 are 81.31 pct identical to residues 1 to 91 of 108 from Escherichia coli K-12 : B2390 NP_837967.1 residues 1 to 412 of 412 are 99.75 pct identical to residues 1 to 412 of 412 from Escherichia coli K-12 : B2392 NP_837968.1 residues 1 to 400 of 400 are 90.49 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B2393 NP_837970.1 residues 1 to 114 of 114 are 100.00 pct identical to residues 6 to 119 of 119 from Escherichia coli K-12 : B2398 NP_837971.1 residues 1 to 123 of 123 are 99.18 pct identical to residues 8 to 130 of 130 from Escherichia coli K-12 : B2399 NP_837972.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation NP_837973.1 residues 16 to 88 of 88 are 41.89 pct identical to residues 14 to of 84 from Escherichia coli K-12 : B1566 NP_837974.1 residues 1 to 308 of 308 are 88.96 pct identical to residues 1 to 308 of 308 from Escherichia coli K-12 : B2409 NP_837975.1 residues 1 to 332 of 332 are 96.08 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B2410 NP_837976.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB NP_837977.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure NP_837978.1 role in sulfur assimilation NP_837979.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis NP_837980.1 residues 1 to 85 of 85 are 100.00 pct identical to residues 1 to 85 of 85 from Escherichia coli K-12 : B2415 NP_837981.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system NP_837982.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose NP_837983.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal NP_837984.1 residues 1 to 124 of 124 are 96.77 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B2419 NP_837985.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide NP_837986.1 residues 1 to 365 of 365 are 99.17 pct identical to residues 1 to 365 of 365 from Escherichia coli K-12 : B2422 NP_837987.1 residues 1 to 149 of 149 are 88.59 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B2423 NP_837988.1 residues 1 to 277 of 277 are 83.03 pct identical to residues 1 to 277 of 277 from Escherichia coli K-12 : B2424 NP_837989.1 residues 21 to 337 of 338 are 94.95 pct identical to residues 21 to 337 of 338 from Escherichia coli K-12 : B2425 NP_837990.1 residues 1 to 263 of 263 are 98.85 pct identical to residues 23 to 285 of 285 from Escherichia coli K-12 : B2426 NP_837991.1 residues 1 to 264 of 266 are 96.96 pct identical to residues 1 to 264 of 285 from Escherichia coli K-12 : B2427 NP_837992.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway NP_837993.1 belongs to PEP-dependent PTS system; contains the PTS EIIBC domains; involved in uptake of exogenous N-acetylmuramic acid (MurNAc); requires crr-encoded enzyme IIA-glucose component NP_837994.1 residues 1 to 299 of 299 are 99.33 pct identical to residues 10 to 308 of 308 from Escherichia coli K-12 : B2431 NP_837995.1 residues 1 to 191 of 191 are 99.47 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B2432 NP_837996.1 residues 1 to 149 of 149 are 79.19 pct identical to residues 3 to 151 of 151 from Escherichia coli K-12 : B2433 NP_837997.1 residues 1 to 141 of 141 are 99.29 pct identical to residues 38 to 178 of 178 from Escherichia coli K-12 : B2434 NP_837998.1 residues 1 to 289 of 289 are 95.15 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B2435 NP_837999.1 residues 1 to 186 of 186 are 97.84 pct identical to residues 165 to 350 of 350 from Escherichia coli K-12 : B2437 NP_838000.1 residues 1 to 166 of 166 are 80.72 pct identical to residues 3 to 168 of 168 from Escherichia coli K-12 : B2438 NP_838001.1 residues 1 to 219 of 219 are 97.71 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B2439 NP_838002.1 no significant similarities NP_838003.1 no significant similarities NP_838004.1 no significant similarities NP_838005.1 no significant similarities NP_838006.1 residues 44 to 105 of 109 are 36.76 pct identical to residues 14 to 81 of 81 from NRprotein_Feb2003 : >ref|NP_416939.1| orf, hypothetical protein [Escherichia coli K12] sp|P76544|YFFM_ECOLI Hypothetical protein yffM pir||C65019 hypothetical protein b2444 - Escherichia coli (strain K-12) gb|AAC75497.1| orf, hypothetical protein [Escherichia coli K12] NP_838007.1 no significant similarities NP_838008.1 residues 1 to 70 of 70 are 100.00 pct identical to residues 92 to 161 of 161 from GenPept : >dbj|BAA84896.1| (AB024946) orf61 [Escherichia coli] NP_838009.1 residues 1 to 486 of 486 are 87.86 pct identical to residues 1 to 486 of 486 from GenPept : >dbj|BAA84897.1| (AB024946) orf62 [Escherichia coli] NP_838010.1 residues 1 to 131 of 131 are 97.70 pct identical to residues 1 to 131 of 131 from GenPept : >dbj|BAA84899.1| (AB024946) InsB [Escherichia coli] NP_838011.1 residues 1 to 90 of 90 are 96.66 pct identical to residues 1 to 90 of 90 from GenPept : >dbj|BAA84900.1| (AB024946) InsA [Escherichia coli] NP_838012.1 residues 1 to 159 of 159 are 98.11 pct identical to residues 1 to 159 of 159 from Escherichia coli K-12 : B2461 NP_838013.1 residues 1 to 131 of 131 are 100.00 pct identical to residues 5 to 135 of 135 from Escherichia coli K-12 : B2462 NP_838014.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate NP_838015.1 Maintains the balance of metabolites in the pentose-phosphate pathway NP_838016.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_838017.1 residues 1 to 347 of 347 are 98.84 pct identical to residues 1 to 347 of 347 from Escherichia coli K-12 : B2466 NP_838018.1 residues 1 to 191 of 191 are 97.90 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B2467 NP_838019.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic) NP_838020.1 residues 1 to 1037 of 1037 are 97.01 pct identical to residues 1 to 1037 of 1037 from Escherichia coli K-12 : B2470; acriflavine resistance, integral membrane protein, possible efflux pump NP_838021.1 residues 1 to 118 of 118 are 98.30 pct identical to residues 1 to 118 of 118 from Escherichia coli K-12 : B2471 NP_838022.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. NP_838023.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate NP_838024.1 residues 1 to 671 of 671 are 88.07 pct identical to residues 1 to 671 of 671 from Escherichia coli K-12 : B2474 NP_838025.1 residues 1 to 287 of 287 are 89.89 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B2475 NP_838026.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase NP_838027.1 residues 1 to 344 of 344 are 84.88 pct identical to residues 2 to 345 of 345 from Escherichia coli K-12 : B2477 NP_838028.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis NP_838029.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine NP_838030.1 residues 1 to 204 of 205 are 98.03 pct identical to residues 14 to 217 of 218 from Escherichia coli K-12 : B2481 NP_838031.1 residues 1 to 315 of 315 are 80.31 pct identical to residues 8 to 322 of 322 from Escherichia coli K-12 : B2483 NP_838032.1 residues 1 to 479 of 479 are 89.35 pct identical to residues 1 to 479 of 479 from Escherichia coli K-12 : B2484 NP_838033.1 interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide NP_838034.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_838035.1 probable electron transfer protein for hydrogenase 4; hydrogenase 4 is believed to be silent in E. coli under conditions tested so far NP_838036.1 residues 1 to 252 of 252 are 95.23 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B2489 NP_838037.1 residues 1 to 158 of 158 are 99.36 pct identical to residues 1 to 158 of 158 from Escherichia coli K-12 : B2490 NP_838038.1 residues 1 to 353 of 353 are 77.62 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 : B2493 NP_838039.1 residues 1 to 487 of 487 are 94.86 pct identical to residues 1 to 487 of 487 from Escherichia coli K-12 : B2494 NP_838040.1 residues 1 to 119 of 119 are 98.31 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B2495 NP_838041.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP NP_838042.1 residues 1 to 429 of 429 are 96.27 pct identical to residues 1 to 429 of 429 from Escherichia coli K-12 : B2497 NP_838043.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate NP_838044.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis NP_838045.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate NP_838046.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate NP_838047.1 residues 1 to 513 of 513 are 97.66 pct identical to residues 1 to 513 of 513 from Escherichia coli K-12 : B2502 NP_838048.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_838049.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_838050.1 residues 1 to 63 of 63 are 100.00 pct identical to residues 1 to 63 of 63 from Escherichia coli K-12 : B2504 NP_838051.1 residues 1 to 172 of 172 are 76.16 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B2505 NP_838052.1 residues 1 to 179 of 179 are 84.91 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B2506 NP_838053.1 residues 1 to 271 of 271 are 94.09 pct identical to residues 1 to 271 of 271 from GenPept : >gb|AAK64592.1| (AY034138) dihydropteroate synthase [Vibrio cholerae] NP_838054.1 residues 14 to 100 of 100 are 100.00 pct identical to residues 28 to 114 of 114 from GenPept : >dbj|BAB79612.1| (AB076707) orf7 [Salmonella enterica subsp. enterica serovar Choleraesuis] NP_838055.1 residues 1 to 497 of 497 are 100.00 pct identical to residues 1 to 497 of 497 from GenPept : >gb|AAK64580.1| (AY034138) transposase [Vibrio cholerae] NP_838056.1 residues 3 to 69 of 74 are 56.52 pct identical to residues 2 to 70 of 71 from GenPept : >gb|AAD21670.1| (AF133830) hypothetical protein [Shuttle vector pME6030] NP_838057.1 residues 12 to 216 of 245 are 67.31 pct identical to residues 15 to 219 of 219 from GenPept : >gb|AAA26414.1| (M59825) parA [Plasmid RP4] NP_838058.1 residues 16 to 97 of 110 are 53.57 pct identical to residues 8 to 91 of 109 from GenPept : >gb|AAK23484.1| (AE005825) transcriptional regulator, ArsR family [Caulobacter crescentus CB15] NP_838059.1 residues 13 to 250 of 255 are 66.39 pct identical to residues 5 to 243 of 244 from GenPept : >gb|AAK23485.1| (AE005825) arsenical resistance protein ArsH, [Caulobacter crescentus CB15] NP_838060.1 residues 1 to 165 of 168 are 54.54 pct identical to residues 1 to 165 of 169 from GenPept : >dbj|BAB50737.1| (AP003003) arsenate reductase [Mesorhizobium loti] NP_838061.1 residues 17 to 353 of 355 are 65.68 pct identical to residues 1 to 338 of 352 from GenPept : >gb|AAL42497.1| (AE009108) sodium bile acid symporter family protein [Agrobacterium tumefaciens str. C58 (U. Washington)] NP_838062.1 no significant similarities NP_838063.1 residues 8 to 267 of 268 are 42.69 pct identical to residues 3 to 252 of 528 from GenPept : >gb|AAA26438.1| (M93696) trbL [Plasmid RP4] NP_838064.1 residues 28 to 259 of 259 are 52.58 pct identical to residues 26 to 257 of 257 from GenPept : >emb|CAD24376.1| (AJ431260) TrbJ protein [uncultured bacterium] NP_838065.1 residues 1 to 61 of 62 are 54.41 pct identical to residues 3 to 70 of 86 from GenPept : >gb|AAF84399.1|AE003987_3 (AE003987) plasmid stabilization protein [Xylella fastidiosa 9a5c] NP_838066.1 residues 6 to 293 of 293 are 61.35 pct identical to residues 13 to 299 of 299 from GenPept : >gb|AAA27382.1| (M73777) replication protein C [Plasmid pTF-FC2] NP_838067.1 residues 3 to 275 of 275 are 81.68 pct identical to residues 7 to 279 of 279 from GenPept : >emb|CAC20104.1| (Y19120) replication protein A [Dichelobacter nodosus] NP_838068.1 no significant similarities NP_838069.1 residues 1 to 396 of 400 are 57.43 pct identical to residues 3 to 399 of 420 from GenPept : >dbj|BAB53138.1| (AP003010) CP4-like integrase [Mesorhizobium loti] NP_838070.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway NP_838071.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate NP_838072.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides NP_838073.1 residues 1 to 83 of 83 are 97.59 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B2510 NP_838074.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains NP_838075.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis NP_838076.1 residues 1 to 206 of 206 are 91.74 pct identical to residues 1 to 206 of 206 from Escherichia coli K-12 : B2513 NP_838077.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG NP_838078.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis NP_838079.1 residues 1 to 337 of 337 are 80.71 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B2516 NP_838080.1 residues 1 to 384 of 384 are 99.47 pct identical to residues 1 to 384 of 384 from Escherichia coli K-12 : B2517 NP_838081.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate NP_838082.1 residues 1 to 398 of 398 are 90.95 pct identical to residues 1 to 398 of 398 from GenPept : >gb|AAK18438.1|AF348706_127 (AF348706) transposase for IS110 [Shigella flexneri] NP_838083.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I NP_838084.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide NP_838085.1 residues 1 to 66 of 66 are 100.00 pct identical to residues 1 to 66 of 66 from Escherichia coli K-12 : B2524 NP_838086.1 residues 1 to 111 of 111 are 100.00 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B2525 NP_838087.1 involved in the maturation of iron-sulfur cluster-containing proteins NP_838088.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins NP_838089.1 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein NP_838090.1 residues 1 to 128 of 128 are 100.00 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B2529 NP_838091.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis NP_838092.1 regulates the expression of the iscRSUA operon NP_838093.1 residues 1 to 246 of 246 are 100.00 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B2532 NP_838094.1 residues 1 to 266 of 267 are 99.62 pct identical to residues 1 to 266 of 267 from Escherichia coli K-12 : B2533 NP_838095.1 residues 1 to 284 of 284 are 98.59 pct identical to residues 10 to 293 of 293 from Escherichia coli K-12 : B2534 NP_838096.1 residues 1 to 426 of 426 are 96.47 pct identical to residues 8 to 433 of 433 from Escherichia coli K-12 : B2535 NP_838097.1 transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters NP_838098.1 activator of 3-phenylpropionic acid catabolism NP_838099.1 residues 1 to 453 of 453 are 99.55 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 : B2538 NP_838100.1 residues 1 to 172 of 172 are 99.41 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B2539 NP_838101.1 residues 1 to 106 of 106 are 100.00 pct identical to residues 1 to 106 of 106 from Escherichia coli K-12 : B2540 NP_838102.1 Converts cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (PP-dihydrodiol) into 3-(2,3-dihydroxylphenyl)propionate NP_838103.1 residues 1 to 164 of 164 are 89.63 pct identical to residues 1 to 164 of 164 from Escherichia coli K-12 : B2543 NP_838104.1 residues 1 to 290 of 290 are 99.31 pct identical to residues 1 to 290 of 290 from Escherichia coli K-12 : B2544 NP_838105.1 residues 1 to 364 of 364 are 94.23 pct identical to residues 1 to 364 of 364 from Escherichia coli K-12 : B2545 NP_838106.1 residues 1 to 332 of 332 are 75.30 pct identical to residues 1 to 332 of 332 from Escherichia coli K-12 : B2546 NP_838107.1 residues 1 to 503 of 503 are 99.00 pct identical to residues 1 to 503 of 503 from Escherichia coli K-12 : B2547 NP_838108.1 residues 1 to 397 of 397 are 98.48 pct identical to residues 3 to 399 of 399 from Escherichia coli K-12 : B2550 NP_838109.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate NP_838110.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine NP_838111.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA NP_838112.1 residues 1 to 444 of 444 are 95.49 pct identical to residues 1 to 444 of 444 from Escherichia coli K-12 : B2554 NP_838113.1 residues 1 to 237 of 237 are 84.38 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B2555 NP_838114.1 residues 1 to 488 of 488 are 87.90 pct identical to residues 9 to 496 of 496 from Escherichia coli K-12 : B2556 NP_838115.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis NP_838116.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function NP_838117.1 residues 1 to 178 of 178 are 100.00 pct identical to residues 1 to 178 of 178 from Escherichia coli K-12 : B2559 NP_838118.2 residues 1 to 190 of 190 are 89.47 pct identical to residues 1 to 190 of 190 from Escherichia coli K-12 : B2560 NP_838119.2 residues 1 to 306 of 306 are 95.75 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B2561 NP_838120.1 residues 1 to 146 of 146 are 89.72 pct identical to residues 1 to 146 of 184 from GenPept : >gb|AAC74242.1| (AE000214) inversion of adjacent DNA; at locus of e14 element [Escherichia coli K12] NP_838121.1 residues 1 to 608 of 608 are 63.54 pct identical to residues 1 to 565 of 565 from NRprotein_Feb03 : >ref|NP_085238.1| invasion plasmid antigen [Shigella flexneri] emb|CAC05787.1| IpaH7.8, member of the IpaH family, secreted by the Mxi-Spa secretion machinery, function unknown [Shigella flexneri] NP_838122.1 residues 5 to 146 of 181 are 60.56 pct identical to residues 24 to 165 of 188 from GenPept : >emb|CAC83575.1| (AJ298298) hypothetical protein [Bacteriophage P27] NP_838123.1 residues 1 to 420 of 429 are 36.74 pct identical to residues 1 to 488 of 490 from GenPept : >emb|CAC83574.1| (AJ298298) tail fiber protein [Bacteriophage P27] NP_838124.1 residues 9 to 162 of 162 are 75.97 pct identical to residues 29 to 182 of 182 from GenPept : >emb|CAC83573.1| (AJ298298) tail fiber assembly protein [Bacteriophage P27] NP_838125.1 residues 3 to 36 of 36 are 76.47 pct identical to residues 525 to 558 of 558 from GenPept : >dbj|BAA00552.1| (D00660) Bcv gene product [Shigella boydii] NP_838126.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_838127.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_838128.1 residues 145 to 301 of 328 are 80.89 pct identical to residues 86 to 242 of 332 from GenPept : >emb|CAC83572.1| (AJ298298) tail fiber protein [Bacteriophage P27] NP_838129.1 no significant similarities NP_838130.1 no significant similarities NP_838131.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_838132.1 residues 1 to 237 of 237 are 90.71 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_838133.1 no significant similarities NP_838134.1 no significant similarities NP_838135.1 residues 1 to 86 of 86 are 97.67 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B2562 NP_838136.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids NP_838137.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) NP_838138.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA NP_838139.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome NP_838140.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity NP_838141.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins NP_838142.1 binds to the ribosome on the universally-conserved alpha-sarcin loop NP_838143.1 involved in the reduction of the SoxR iron-sulfur cluster NP_838144.1 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP NP_838145.1 residues 1 to 216 of 216 are 87.50 pct identical to residues 1 to 216 of 216 from Escherichia coli K-12 : B2572 NP_838146.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response NP_838147.1 residues 1 to 285 of 285 are 89.82 pct identical to residues 1 to 285 of 285 from Escherichia coli K-12 : B2575 NP_838148.1 facilitates an early step in the assembly of the 50S subunit of the ribosome NP_838149.1 residues 1 to 306 of 308 are 97.05 pct identical to residues 1 to 306 of 308 from Escherichia coli K-12 : B2577 NP_838150.1 residues 1 to 195 of 195 are 99.48 pct identical to residues 1 to 195 of 195 from Escherichia coli K-12 : B2578 NP_838151.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit NP_838152.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine NP_838153.1 residues 1 to 345 of 345 are 92.75 pct identical to residues 1 to 345 of 345 from Escherichia coli K-12 : B2581 NP_838154.1 residues 1 to 139 of 139 are 93.52 pct identical to residues 1 to 139 of 139 from Escherichia coli K-12 : B2582 NP_838155.1 residues 1 to 240 of 240 are 99.16 pct identical to residues 1 to 240 of 240 from Escherichia coli K-12 : B2583 NP_838156.1 residues 1 to 886 of 886 are 95.59 pct identical to residues 1 to 886 of 886 from Escherichia coli K-12 : B2584 NP_838157.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome NP_838158.1 residues 1 to 90 of 90 are 97.77 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B2586 NP_838159.1 residues 1 to 432 of 432 are 92.36 pct identical to residues 1 to 432 of 432 from Escherichia coli K-12 : B2587 NP_838160.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_838161.1 with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline NP_838162.1 responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA NP_838163.1 residues 1 to 243 of 243 are 98.35 pct identical to residues 1 to 243 of 243 from Escherichia coli K-12 : B2593 NP_838164.1 residues 1 to 857 of 857 are 95.44 pct identical to residues 1 to 857 of 857 from Escherichia coli K-12 : B2592 NP_838165.1 residues 1 to 336 of 336 are 99.40 pct identical to residues 113 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri]; partial NP_838166.1 residues 1 to 126 of 126 are 100.00 pct identical to residues 7 to 132 of 132 from GenPept : >gb|AAL72522.1| (AF386526) hypothetical protein [Shigella flexneri 2a]; partial NP_838167.1 residues 1 to 68 of 68 are 94.11 pct identical to residues 1 to 68 of 68 from Escherichia coli K-12 : B2596 NP_838168.1 associated with 30S ribosomal subunit; interferes with translation elongation NP_838170.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis NP_838171.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis NP_838172.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive NP_838173.1 residues 1 to 121 of 121 are 99.17 pct identical to residues 14 to 134 of 134 from Escherichia coli K-12 : B2602 NP_838174.1 residues 1 to 172 of 172 are 94.18 pct identical to residues 1 to 172 of 172 from Escherichia coli K-12 : B2603 NP_838175.1 residues 1 to 160 of 160 are 98.75 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B2605 NP_838176.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site NP_838177.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA NP_838178.1 Essential for efficient processing of 16S rRNA NP_838179.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity NP_838180.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins NP_838181.1 residues 1 to 288 of 288 are 79.16 pct identical to residues 1 to 288 of 288 from Escherichia coli K-12 : B2611 NP_838182.1 residues 1 to 227 of 227 are 99.55 pct identical to residues 1 to 227 of 227 from Escherichia coli K-12 : B2613 NP_838183.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor NP_838184.1 catalyzes the phosphorylation of NAD to NADP NP_838185.1 residues 1 to 553 of 553 are 95.47 pct identical to residues 1 to 553 of 553 from Escherichia coli K-12 : B2616 NP_838186.1 residues 1 to 50 of 50 are 100.00 pct identical to residues 1 to 50 of 50 from Escherichia coli K-12 : B2617 NP_838187.1 residues 3 to 96 of 96 are 100.00 pct identical to residues 9 to 102 of 102 from Escherichia coli K-12 : B2618 NP_838188.1 residues 1 to 145 of 145 are 100.00 pct identical to residues 14 to 158 of 158 from Escherichia coli K-12 : B2619 NP_838189.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation NP_838190.1 CP4-57 prophage; integrase NP_838191.1 residues 1 to 90 of 99 are 98.88 pct identical to residues 1 to 90 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838192.1 residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli] NP_838193.1 residues 1 to 133 of 142 are 94.73 pct identical to residues 1 to 133 of 288 from GenPept : >gb|AAL57581.1|AF453442_10 (AF453442) transposase 1 [Escherichia coli]; partial NP_838194.1 residues 1 to 22 of 36 are 100 pct identical to residues 167 to 188 of 305 from GenPept : >gb|CAB37974.1|X02311 (AF453442) hypothetical protein of IS3 [Escherichia coli]; partial NP_838196.1 residues 1 to 90 of 90 are 96.66 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B2658 NP_838197.2 in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution NP_838198.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate NP_838199.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate NP_838200.1 residues 1 to 466 of 466 are 99.35 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 : B2663 NP_838201.1 regulator of gab gene expression NP_838202.1 residues 1 to 149 of 149 are 99.32 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B2665 NP_838203.1 residues 1 to 52 of 52 are 98.07 pct identical to residues 1 to 52 of 52 from Escherichia coli K-12 : B2666 NP_838204.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_838205.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_838206.1 residues 1 to 99 of 99 are 97.97 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B2667 NP_838207.1 residues 1 to 174 of 174 are 97.70 pct identical to residues 1 to 174 of 174 from Escherichia coli K-12 : B2668 NP_838208.1 residues 1 to 134 of 134 are 86.56 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B2669 NP_838209.1 residues 1 to 149 of 149 are 100.00 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B2670 NP_838210.1 residues 1 to 114 of 114 are 100.00 pct identical to residues 1 to 114 of 114 from Escherichia coli K-12 : B2671 NP_838211.1 residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B2673; hydrogen donor NP_838212.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF NP_838213.1 Catalyzes the rate-limiting step in dNTP synthesis NP_838214.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE NP_838215.1 with ProWX is involved in the high-affinity uptake of glycine betaine NP_838216.1 with ProVX is involved in the high-affinity uptake of glycine betaine NP_838217.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine NP_838218.1 residues 1 to 87 of 310 are 100.00 pct identical to residues 1 to 87 of 88 from Escherichia coli K-12 : B2680 NP_838219.1 residues 1 to 245 of 245 are 93.46 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B2682 NP_838220.1 residues 1 to 111 of 111 are 90.09 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B2683 NP_838221.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB NP_838222.1 residues 1 to 512 of 512 are 91.99 pct identical to residues 1 to 512 of 512 from Escherichia coli K-12 : B2686 NP_838223.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 NP_838224.1 involved in the first step of glutathione biosynthesis NP_838225.1 residues 22 to 142 of 142 are 100.00 pct identical to residues 22 to 142 of 142 from Escherichia coli K-12 : B2689 NP_838226.1 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent NP_838227.1 affects carbohydrate metabolism; has regulatory role in many processes NP_838228.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_838229.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities NP_838230.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs NP_838231.1 residues 1 to 165 of 165 are 100.00 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B2700 NP_838232.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan NP_838233.1 residues 1 to 319 of 319 are 92.47 pct identical to residues 1 to 319 of 319 from Escherichia coli K-12 : B2703 NP_838234.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_838235.1 catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate NP_838236.1 regulator for glucitol utilization NP_838237.1 regulates genes involved in glucitol utilization NP_838238.2 catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate NP_838239.2 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon NP_838240.1 detoxifies nitric oxide using NADH NP_838241.1 catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase NP_838242.1 residues 1 to 750 of 750 are 89.73 pct identical to residues 1 to 750 of 750 from Escherichia coli K-12 : B2712 NP_838243.1 involved in electron transport from formate to hydrogen NP_838244.1 residues 1 to 336 of 336 are 97.91 pct identical to residues 2 to 337 of 337 from Escherichia coli K-12 : B2714 NP_838245.1 residues 1 to 38 of 39 are 62.79 pct identical to residues 1 to 43 of 180 from Escherichia coli K-12 : B2720 NP_838246.1 residues 1 to 569 of 569 are 96.83 pct identical to residues 1 to 569 of 569 from Escherichia coli K-12 : B2721 NP_838247.1 residues 1 to 291 of 307 are 91.40 pct identical to residues 1 to 291 of 307 from Escherichia coli K-12 : B2722 NP_838248.1 catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3) NP_838249.1 residues 1 to 203 of 203 are 91.62 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 : B2724 NP_838250.1 regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon NP_838251.1 plays a role in hydrogenase nickel cofactor insertion NP_838252.1 GTP hydrolase involved in nickel liganding into hydrogenases NP_838253.1 HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase NP_838254.1 residues 1 to 373 of 373 are 99.73 pct identical to residues 1 to 373 of 373 from Escherichia coli K-12 : B2729; pleiotrophic effects on 3 hydrogenase isozymes NP_838255.1 residues 1 to 322 of 322 are 98.44 pct identical to residues 1 to 322 of 322 from Escherichia coli K-12 : B2730; has structural role in maturation of all 3 hydrogenases NP_838256.1 residues 1 to 692 of 692 are 96.67 pct identical to residues 1 to 692 of 692 from Escherichia coli K-12 : B2731 NP_838257.1 residues 1 to 117 of 117 are 99.14 pct identical to residues 1 to 117 of 117 from Escherichia coli K-12 : B2732 NP_838258.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_838259.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838260.1 This protein performs the mismatch recognition step during the DNA repair process NP_838261.1 residues 1 to 265 of 265 are 98.11 pct identical to residues 1 to 265 of 265 from Escherichia coli K-12 : B2735 NP_838262.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_838263.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAB86997.1| (U97492) hypothetical 31 KD protein [Shigella flexneri] NP_838264.1 residues 4 to 698 of 698 are 75.10 pct identical to residues 2 to 696 of 696 from GenPept : >dbj|BAB38368.1| (AP002567) phage transposase [Escherichia coli O157:H7] NP_838265.1 residues 1 to 83 of 83 are 54.21 pct identical to residues 1 to 82 of 82 from GenPept : >dbj|BAB38367.1| (AP002567) DNA-binding protein [Escherichia coli O157:H7] NP_838266.1 residues 11 to 184 of 187 are 42.69 pct identical to residues 2 to 175 of 176 from GenPept : >dbj|BAB38366.1| (AP002567) regulatory protein [Escherichia coli O157:H7] NP_838267.1 residues 1 to 316 of 316 are 97.15 pct identical to residues 1 to 316 of 475 from GenPept : >gb|AAG57845.1|AE005501_14 (AE005501) orf; hypothetical protein [Escherichia coli O157:H7 EDL933] NP_838268.1 residues 1 to 197 of 197 are 100.00 pct identical to residues 1 to 197 of 197 from GenPept : >gb|AAG14986.1|AF242210_5 (AF242210) phenylacrylic acid decarboxylase-like protein [Escherichia coli] NP_838269.1 residues 1 to 135 of 135 are 97.03 pct identical to residues 1 to 135 of 135 from GenPept : >gb|AAG14991.1|AF242211_3 (AF242211) transcriptional regulator protein [Escherichia coli] NP_838270.1 outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus NP_838271.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins NP_838272.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate NP_838273.1 catalyzes the modification of U13 in tRNA(Glu) NP_838274.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate NP_838275.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers NP_838276.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein NP_838277.1 residues 1 to 107 of 107 are 99.06 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B2749 NP_838278.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis NP_838279.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ NP_838280.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP NP_838281.1 catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3 NP_838282.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite NP_838283.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide NP_838284.1 catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity NP_838285.1 residues 1 to 120 of 120 are 100.00 pct identical to residues 2 to 121 of 121 from Escherichia coli K-12 : B2765 NP_838286.1 residues 1 to 433 of 433 are 89.37 pct identical to residues 1 to 433 of 433 from Escherichia coli K-12 : B2766 NP_838287.1 residues 1 to 98 of 98 are 92.85 pct identical to residues 1 to 98 of 98 from Escherichia coli K-12 : B2767 NP_838288.1 residues 1 to 297 of 297 are 97.30 pct identical to residues 1 to 297 of 297 from Escherichia coli K-12 : B2769 NP_838289.1 residues 1 to 259 of 259 are 93.05 pct identical to residues 3 to 261 of 261 from Escherichia coli K-12 : B2770 NP_838290.1 residues 1 to 469 of 469 are 74.84 pct identical to residues 1 to 469 of 469 from Escherichia coli K-12 : B2771 NP_838291.1 residues 1 to 264 of 264 are 99.24 pct identical to residues 1 to 264 of 264 from Escherichia coli K-12 : B2772 NP_838292.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838293.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838294.1 residues 1 to 223 of 223 are 93.27 pct identical to residues 1 to 223 of 223 from Escherichia coli K-12 : B2777 NP_838295.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838296.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_838297.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis NP_838298.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer NP_838299.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era NP_838300.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP NP_838301.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S] NP_838302.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system NP_838303.1 residues 1 to 446 of 446 are 99.77 pct identical to residues 1 to 446 of 446 from Escherichia coli K-12 : B2787 NP_838304.1 residues 1 to 446 of 446 are 94.61 pct identical to residues 1 to 446 of 446 from Escherichia coli K-12 : B2788 NP_838305.1 residues 1 to 450 of 450 are 99.33 pct identical to residues 1 to 450 of 450 from Escherichia coli K-12 : B2789 NP_838306.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group NP_838307.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp NP_838308.1 residues 1 to 109 of 109 are 85.32 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B2792 NP_838309.1 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function NP_838310.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis NP_838311.1 residues 1 to 454 of 454 are 100.00 pct identical to residues 1 to 454 of 454 from Escherichia coli K-12 : B2795 NP_838312.1 residues 1 to 437 of 444 are 99.77 pct identical to residues 7 to 443 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_838313.1 residues 1 to 429 of 429 are 96.27 pct identical to residues 1 to 429 of 429 from Escherichia coli K-12 : B2796 NP_838314.1 residues 1 to 455 of 455 are 90.76 pct identical to residues 1 to 455 of 455 from Escherichia coli K-12 : B2797 NP_838315.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups NP_838316.1 residues 1 to 382 of 382 are 99.47 pct identical to residues 2 to 383 of 383 from Escherichia coli K-12 : B2799 NP_838317.1 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate NP_838318.1 residues 1 to 438 of 438 are 89.49 pct identical to residues 1 to 438 of 438 from Escherichia coli K-12 : B2801 NP_838319.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose NP_838320.1 residues 1 to 140 of 140 are 99.28 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 : B2804 NP_838321.1 regulates expression of genes involved in L-fucose utilization NP_838322.1 residues 1 to 366 of 366 are 99.72 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B2806 NP_838323.1 residues 1 to 131 of 131 are 100.00 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B2807 NP_838324.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence NP_838325.1 residues 1 to 76 of 76 are 97.36 pct identical to residues 1 to 76 of 76 from Escherichia coli K-12 : B2809 NP_838326.1 residues 1 to 401 of 401 are 98.75 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 : B2810 NP_838327.1 residues 1 to 147 of 147 are 98.63 pct identical to residues 1 to 147 of 147 from Escherichia coli K-12 : B2811 NP_838328.1 residues 1 to 268 of 268 are 99.62 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B2812 NP_838329.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues NP_838330.1 residues 1 to 447 of 447 are 92.61 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B2817 NP_838331.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis NP_838332.1 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity NP_838333.1 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity NP_838334.1 residues 1 to 962 of 962 are 99.68 pct identical to residues 1 to 962 of 962 from Escherichia coli K-12 : B2821 NP_838335.1 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination NP_838336.1 residues 1 to 116 of 116 are 81.03 pct identical to residues 1 to 107 of 107 from Escherichia coli K-12 : B2823 NP_838337.2 residues 16 to 121 of 121 are 96.22 pct identical to residues 16 to 121 of 121 from Escherichia coli K-12 : B2824 NP_838338.1 residues 1 to 187 of 187 are 98.39 pct identical to residues 1 to 187 of 187 from Escherichia coli K-12 : B2825 NP_838339.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived NP_838340.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein NP_838341.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr NP_838342.1 hydrolyzes diadenosine polyphosphate NP_838343.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair NP_838344.1 residues 1 to 237 of 237 are 76.37 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B2832 NP_838345.1 residues 1 to 72 of 72 are 100.00 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B2833 NP_838346.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH NP_838347.1 residues 1 to 396 of 396 are 84.63 pct identical to residues 1 to 397 of 397 from Escherichia coli K-12 : B2835 NP_838348.1 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1 NP_838349.1 controls transcription of galETKM NP_838350.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding NP_838351.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase NP_838352.1 residues 1 to 230 of 230 are 99.13 pct identical to residues 1 to 230 of 230 from Escherichia coli K-12 : B2840 NP_838353.1 residues 1 to 472 of 472 are 94.06 pct identical to residues 1 to 472 of 472 from Escherichia coli K-12 : B2841 NP_838354.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate NP_838355.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate NP_838356.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis NP_838357.1 residues 1 to 372 of 372 are 99.19 pct identical to residues 38 to 409 of 409 from Escherichia coli K-12 : B2845 NP_838358.1 residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli] NP_838359.1 residues 1 to 288 of 288 are 99.30 pct identical to residues 1 to 288 of 288 from GenPept : >gb|AAL57519.1|AF453441_3 (AF453441) transposase 1 [Escherichia coli] NP_838360.1 residues 5 to 326 of 329 are 92.54 pct identical to residues 4 to 325 of 327 from GenPept : >emb|CAD02863.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_838361.1 residues 1 to 163 of 163 are 79.75 pct identical to residues 1 to 163 of 163 from GenPept : >emb|CAD02864.1| (AL627277) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_838362.1 residues 17 to 116 of 248 are 40.77 pct identical to residues 19 to 116 of 280 from GenPept : >emb|CAD09973.1| (AL513384) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_838363.1 no significant similarities NP_838364.1 residues 1 to 511 of 536 are 96.67 pct identical to residues 1 to 511 of 548 from GenPept : >emb|CAD02867.1| (AL627277) possible integrase [Salmonella enterica subsp. enterica serovar Typhi] NP_838365.1 residues 2 to 260 of 260 are 89.18 pct identical to residues 1 to 259 of 259 from Escherichia coli K-12 : B2865 NP_838366.1 molybdenum cofactor-binding protein; participates in purine salvage NP_838367.1 FAD-binding subunit; with XdhA and XdhC participates in purine salvage NP_838368.1 iron-sulfur-binding subunit; with XdhA and XdhB participates in purine salvage NP_838369.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838370.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838371.1 residues 1 to 505 of 505 are 99.00 pct identical to residues 1 to 505 of 505 from Escherichia coli K-12 : B2888 NP_838372.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate NP_838373.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 NP_838374.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1 NP_838375.1 5'-3' single-stranded-DNA-specific exonuclease NP_838376.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity NP_838377.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_838378.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic NP_838379.1 residues 1 to 135 of 135 are 99.25 pct identical to residues 1 to 135 of 135 from Escherichia coli K-12 : B2896 NP_838380.1 residues 1 to 88 of 88 are 100.00 pct identical to residues 1 to 88 of 88 from Escherichia coli K-12 : B2897 NP_838381.1 physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator NP_838382.1 residues 1 to 219 of 219 are 92.69 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B2899 NP_838383.1 residues 1 to 477 of 477 are 95.59 pct identical to residues 3 to 479 of 479 from Escherichia coli K-12 : B2901 NP_838384.1 residues 1 to 247 of 247 are 99.19 pct identical to residues 1 to 247 of 247 from Escherichia coli K-12 : B2902 NP_838385.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine NP_838386.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor NP_838387.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein NP_838388.1 residues 1 to 400 of 400 are 97.50 pct identical to residues 1 to 400 of 400 from Escherichia coli K-12 : B2906 NP_838389.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone NP_838390.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide NP_838391.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown NP_838392.1 residues 1 to 109 of 109 are 100.00 pct identical to residues 1 to 109 of 109 from Escherichia coli K-12 : B2910 NP_838393.1 ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms; unknown function NP_838394.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate NP_838395.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway NP_838396.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport NP_838397.1 MDM; functions in conversion of succinate to propionate NP_838398.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins NP_838399.2 catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA NP_838400.1 residues 1 to 285 of 316 are 94.38 pct identical to residues 6 to 290 of 303 from Escherichia coli K-12 : B2921 NP_838401.1 residues 1 to 246 of 246 are 94.71 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B2922 NP_838402.1 Involved in the export of arginine NP_838403.1 participates in the regulation of osmotic pressure changes within the cel NP_838404.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate NP_838405.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway NP_838406.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate NP_838407.1 residues 1 to 89 of 89 are 98.87 pct identical to residues 55 to 143 of 143 from GenPept : >gb|AAG58054.1|AE005523_3 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933] NP_838408.1 residues 1 to 192 of 192 are 81.25 pct identical to residues 1 to 192 of 192 from GenPept : >gb|AAG58055.1|AE005523_4 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933] NP_838409.1 residues 1 to 102 of 102 are 83.33 pct identical to residues 1 to 102 of 235 from GenPept : >gb|AAG58056.1|AE005523_5 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933] NP_838410.1 residues 1 to 132 of 132 are 99.24 pct identical to residues 104 to 235 of 235 from GenPept : >gb|AAG58056.1|AE005523_5 (AE005523) orf; hypothetical protein [Escherichia coli O157:H7 EDL933] NP_838411.1 residues 1 to 225 of 225 are 91.55 pct identical to residues 1 to 225 of 225 from GenPept : >gb|AAG58057.1|AE005523_6 (AE005523) ATP-binding protein of ABC transport system [Escherichia coli O157:H7 EDL933] NP_838412.1 residues 1 to 225 of 225 are 90.22 pct identical to residues 1 to 225 of 225 from GenPept : >dbj|BAB37226.1| (AP002563) ABC-transporter ATP-binding subunit [Escherichia coli O157:H7] NP_838413.1 residues 1 to 151 of 169 are 96.68 pct identical to residues 1 to 151 of 169 from Escherichia coli K-12 : B2929 NP_838414.1 residues 1 to 321 of 321 are 99.37 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B2930 NP_838415.1 residues 1 to 329 of 329 are 98.78 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 : B2931 NP_838416.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_838417.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838418.1 residues 32 to 302 of 302 are 48.89 pct identical to residues 32 to 303 of 308 from GenPept : >emb|CAC90171.1| (AJ414147) SPFH domain protein [Yersinia pestis] NP_838419.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_838420.1 residues 1 to 294 of 294 are 92.85 pct identical to residues 1 to 294 of 294 from Escherichia coli K-12 : B2936 NP_838421.1 catalyzes the formation of putrescine from agmatine NP_838422.1 residues 1 to 124 of 124 are 97.58 pct identical to residues 120 to 243 of 243 from GenPept : >gb|AAG58068.1|AE005524_4 (AE005524) Z4282 gene product [Escherichia coli O157:H7 EDL933] NP_838423.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_838424.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838425.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis NP_838426.1 residues 1 to 48 of 48 are 93.75 pct identical to residues 1 to 48 of 48 from Escherichia coli K-12 : B2939 NP_838427.1 residues 1 to 71 of 71 are 77.46 pct identical to residues 1 to 71 of 71 from Escherichia coli K-12 : B2940 NP_838428.1 residues 1 to 83 of 83 are 98.79 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B2941 NP_838429.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase NP_838430.1 residues 1 to 451 of 451 are 97.11 pct identical to residues 14 to 464 of 464 from Escherichia coli K-12 : B2943 NP_838431.1 residues 1 to 165 of 165 are 98.78 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B2944 NP_838432.1 residues 1 to 235 of 235 are 94.04 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B2945 NP_838433.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase NP_838434.1 The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione NP_838435.2 residues 1 to 211 of 211 are 100.00 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B2948 NP_838436.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function NP_838437.1 residues 1 to 341 of 341 are 98.24 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 : B2950 NP_838438.1 residues 1 to 234 of 234 are 93.16 pct identical to residues 1 to 234 of 234 from Escherichia coli K-12 : B2951 NP_838439.1 residues 1 to 188 of 188 are 83.51 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B2952 NP_838440.2 residues 1 to 100 of 100 are 85.00 pct identical to residues 1 to 100 of 100 from Escherichia coli K-12 : B2953 NP_838441.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine NP_838442.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_838443.1 residues 1 to 114 of 117 are 80.70 pct identical to residues 1 to 114 of 216 from NRprotein_Feb03 : >gb|AAF06334.1|AF193593_1 C4-dicarboxylate periplasmic binding protein precursor DctP [Klebsiella pneumoniae] NP_838444.1 residues 1 to 191 of 197 are 52.60 pct identical to residues 116 to 307 of 312 from NRprotein_Feb03 : >ref|NP_762983.1| TRAP-type C4-dicarboxylate transport system, periplasmic component [Vibrio vulnificus CMCP6] gb|AAO07973.1|AE016811_214 TRAP-type C4-dicarboxylate transport system, periplasmic component [Vibrio vulnificus CMCP6] NP_838445.1 residues 36 to 166 of 167 are 23.13 pct identical to residues 27 to 157 of 157 from Escherichia coli K-12 : B3577 NP_838446.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838447.1 residues 5 to 393 of 433 are 33.07 pct identical to residues 1 to 384 of 424 from Escherichia coli K-12 : B3578 NP_838448.1 residues 1 to 320 of 320 are 99.37 pct identical to residues 1 to 320 of 335 from Escherichia coli K-12 : B2956 NP_838449.1 catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis NP_838450.1 residues 1 to 238 of 238 are 99.57 pct identical to residues 2 to 239 of 239 from Escherichia coli K-12 : B2958 NP_838451.2 residues 1 to 118 of 118 are 98.30 pct identical to residues 1 to 118 of 118 from Escherichia coli K-12 : B2959 NP_838452.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine NP_838453.1 residues 1 to 350 of 350 are 98.85 pct identical to residues 1 to 350 of 350 from Escherichia coli K-12 : B2961; involved in G.C -->T.A transversions NP_838454.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 : B2962 NP_838455.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues NP_838456.1 residues 1 to 434 of 434 are 100.00 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B2964 NP_838457.1 residues 1 to 731 of 731 are 96.03 pct identical to residues 1 to 731 of 731 from Escherichia coli K-12 : B2965 NP_838458.1 residues 1 to 235 of 235 are 76.59 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B2966 NP_838459.1 residues 1 to 420 of 420 are 97.72 pct identical to residues 1 to 420 of 420 from NRprotein_Feb03 : >ref|NP_757064.1| Prophage P4 integrase [Escherichia coli CFT073] gb|AAN83638.1|AE016771_149 Prophage P4 integrase [Escherichia coli CFT073] NP_838460.1 residues 1 to 1171 of 1171 are 92.99 pct identical to residues 1 to 1171 of 1171 from GenPept : >gb|AAL23307.1| (AE008910) superfamily I DNA helicases [Salmonella typhimurium LT2] NP_838461.1 residues 1 to 253 of 253 are 75.88 pct identical to residues 148 to 400 of 400 from NRprotein_Feb03 : >dbj|BAA77991.1| traF [Plasmid R64] dbj|BAB91674.1| 99 pct identical to gp:AB021078_83[TraF of plasmid ColIb-P9] [Salmonella typhimurium] NP_838462.1 residues 1 to 1285 of 1285 are 100.00 pct identical to residues 1 to 1285 of 1285 from NRprotein_Feb03 : >ref|NP_708742.1| exported serine protease SigA [Shigella flexneri 2a str. 301] gb|AAF67320.1|AF200692_1 exported serine protease SigA [Shigella flexneri 2a] gb|AAN44449.1|AE015310_3 exported serine protease SigA [Shigella flexneri 2a str. 301] NP_838463.1 residues 1 to 72 of 72 are 97.22 pct identical to residues 331 to 402 of 402 from GenPept : >gb|AAG18473.1|AF143819_2 (AF143819) transposase-like protein; TnpA [Escherichia coli] NP_838464.1 residues 1 to 1070 of 1070 are 96.16 pct identical to residues 304 to 1373 of 1373 from GenPept : >gb|AAK00464.1| (AF200692) Pic [Shigella flexneri 2a] NP_838465.1 residues 1 to 277 of 277 are 100.00 pct identical to residues 226 to 502 of 502 from GenPept : >dbj|BAA84894.1| (AB024946) orf59 [Escherichia coli] NP_838466.1 residues 1 to 208 of 226 are 95.19 pct identical to residues 1 to 208 of 376 from GenPept : >gb|AAC73361.1| (AE000133) orf, hypothetical protein [Escherichia coli K12] NP_838467.1 residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >gb|AAL67399.1|AF447814_67 (AF447814) TnpE-like protein [Escherichia coli] NP_838468.1 residues 15 to 119 of 141 are 37.27 pct identical to residues 44 to 153 of 173 from GenPept : >gb|AAL08463.1|AF326777_38 (AF326777) unknown [Shigella flexneri 2a] NP_838469.1 residues 1 to 127 of 127 are 100.00 pct identical to residues 1 to 127 of 127 from GenPept : >gb|AAK00467.1| (AF200692) unknown [Shigella flexneri 2a] NP_838470.1 residues 80 to 199 of 199 are 100.00 pct identical to residues 1 to 120 of 120 from GenPept : >gb|AAK00468.1| (AF200692) unknown [Shigella flexneri 2a] NP_838471.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_838472.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_838473.1 residues 1 to 68 of 68 are 89.70 pct identical to residues 25 to 92 of 92 from GenPept : >gb|AAL08466.1| (AF326777) unknown [Shigella flexneri 2a] NP_838474.1 residues 19 to 190 of 190 are 92.44 pct identical to residues 1 to 172 of 172 from GenPept : >gb|AAK00471.1| (AF200692) unknown [Shigella flexneri 2a] NP_838475.1 no significant similarities NP_838476.1 residues 1 to 339 of 339 are 100.00 pct identical to residues 1 to 339 of 339 from NRprotein_Feb03 : >ref|NP_708763.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44470.1|AE015312_3 orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] NP_838477.1 residues 1 to 290 of 290 are 99.65 pct identical to residues 1 to 290 of 290 from GenPept : >gb|AAK00473.1| (AF200692) unknown [Shigella flexneri 2a] NP_838478.1 residues 1 to 293 of 297 are 64.16 pct identical to residues 53 to 344 of 1091 from Escherichia coli K-12 : B2000; similar to adhesin NP_838479.1 residues 1 to 706 of 706 are 92.77 pct identical to residues 386 to 1091 of 1091 from Escherichia coli K-12 : B2000; similar to adhesin NP_838480.1 residues 1 to 507 of 838 are 85.99 pct identical to residues 3 to 509 of 512 from Escherichia coli K-12 : B2001 NP_838481.1 residues 9 to 151 of 151 are 99.30 pct identical to residues 1 to 143 of 143 from GenPept : >gb|AAK00476.1| (AF200692) unknown [Shigella flexneri 2a] NP_838482.1 residues 1 to 272 of 272 are 89.37 pct identical to residues 1 to 273 of 273 from GenPept : >dbj|BAB36224.1| (AP002559) hypothetical protein [Escherichia coli O157:H7] NP_838483.1 residues 1 to 157 of 157 are 99.36 pct identical to residues 115 to 271 of 271 from GenPept : >gb|AAK00478.1| (AF200692) unknown [Shigella flexneri 2a] NP_838484.1 residues 16 to 163 of 163 are 85.81 pct identical to residues 1 to 148 of 148 from Escherichia coli K-12 : B2002 NP_838485.1 residues 1 to 73 of 73 are 93.15 pct identical to residues 1 to 73 of 73 from Escherichia coli K-12 : B2003 NP_838486.1 residues 1 to 107 of 125 are 94.39 pct identical to residues 1 to 107 of 122 from Escherichia coli K-12 : B2004 NP_838487.1 residues 1 to 124 of 125 are 85.48 pct identical to residues 1 to 124 of 124 from Escherichia coli K-12 : B2005 NP_838488.1 residues 5 to 52 of 162 are 79.16 pct identical to residues 2 to 49 of 64 from Escherichia coli K-12 : B2006 NP_838489.1 residues 1 to 280 of 280 are 100.00 pct identical to residues 1 to 280 of 280 from GenPept : >gb|AAK00485.1| (AF200692) unknown [Shigella flexneri 2a] NP_838490.1 residues 1 to 99 of 99 are 100.00 pct identical to residues 1 to 99 of 99 from GenPept : >gb|AAL57580.1|AF453442_9 (AF453442) transposase 2 [Escherichia coli] NP_838491.1 residues 1 to 288 of 288 are 99.30 pct identical to residues 1 to 288 of 288 from GenPept : >gb|AAL57519.1|AF453441_3 (AF453441) transposase 1 [Escherichia coli] NP_838492.1 no significant similarities NP_838493.1 no significant similarities NP_838494.1 residues 3 to 97 of 97 are 83.15 pct identical to residues 73 to 167 of 167 from GenPept : >gb|AAK18549.1|AF348706_238 (AF348706) iso-IS1 orfB [Shigella flexneri] NP_838495.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838496.1 residues 1 to 528 of 528 are 79.82 pct identical to residues 1 to 560 of 560 from Escherichia coli K-12 : B2975 NP_838497.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA NP_838498.1 residues 1 to 118 of 134 are 100.00 pct identical to residues 1 to 118 of 134 from Escherichia coli K-12 : B2977 NP_838499.1 residues 1 to 252 of 256 are 98.41 pct identical to residues 1 to 252 of 254 from Escherichia coli K-12 : B2980 NP_838500.1 activates fatty acids by binding to coenzyme A NP_838501.1 residues 1 to 281 of 298 are 32.74 pct identical to residues 11 to 288 of 317 from GenPept : >gb|AAK23148.1| (AE005794) conserved hypothetical protein [Caulobacter crescentus CB15] NP_838502.1 no significant similarities NP_838503.1 residues 1 to 109 of 116 are 41.28 pct identical to residues 1 to 109 of 404 from GenPept : >gb|AAK23146.1| (AE005794) aminotransferase, class II [Caulobacter crescentus CB15]; partial NP_838504.1 residues 2 to 260 of 262 are 51.53 pct identical to residues 130 to 389 of 404 from GenPept : >gb|AAK23146.1| (AE005794) aminotransferase, class II [Caulobacter crescentus CB15]; partial NP_838505.1 residues 3 to 352 of 359 are 28.61 pct identical to residues 4 to 354 of 358 from GenPept : >emb|CAC92669.1| (AJ414157) membrane protein [Yersinia pestis] NP_838506.1 residues 34 to 342 of 356 are 28.66 pct identical to residues 33 to 350 of 372 from GenPept : >gb|AAG07215.1|AE004800_4 (AE004800) conserved hypothetical protein [Pseudomonas aeruginosa] NP_838507.1 residues 20 to 184 of 186 are 56.36 pct identical to residues 20 to 183 of 184 from GenPept : >gb|AAL01384.1|AF407017_1 (AF407017) periplasmic protein [Escherichia coli] NP_838508.1 no significant similarities NP_838509.1 residues 45 to 355 of 449 are 92.92 pct identical to residues 15 to 325 of 325 from Escherichia coli K-12 : B2983 NP_838510.1 residues 1 to 252 of 252 are 92.85 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B2984 NP_838511.1 residues 1 to 237 of 237 are 97.46 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B2985 NP_838512.1 residues 1 to 230 of 230 are 99.56 pct identical to residues 1 to 230 of 230 from Escherichia coli K-12 : B2986 NP_838513.1 residues 1 to 499 of 499 are 89.17 pct identical to residues 1 to 499 of 499 from Escherichia coli K-12 : B2987 NP_838514.1 catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction NP_838515.1 YghU; B2989; one of eight glutathione transferase proteins from E. coli NP_838516.1 residues 1 to 82 of 82 are 100.00 pct identical to residues 1 to 82 of 82 from Escherichia coli K-12 : B2990; may effect maturation of large subunit of hydrogenase-2 NP_838517.1 plays a role in hydrogenase nickel cofactor insertion NP_838518.1 residues 1 to 162 of 162 are 91.97 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B2992 NP_838519.1 protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC) NP_838520.1 involved in hydrogen uptake NP_838521.1 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits NP_838522.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2 NP_838523.1 involved in hydrogen uptake NP_838524.1 residues 1 to 95 of 95 are 100.00 pct identical to residues 1 to 95 of 95 from Escherichia coli K-12 : B2998 NP_838525.1 residues 1 to 136 of 136 are 98.52 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B2999 NP_838526.1 residues 1 to 346 of 346 are 99.42 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B3001 NP_838527.1 residues 1 to 164 of 164 are 92.07 pct identical to residues 1 to 164 of 164 from Escherichia coli K-12 : B3002 NP_838528.1 residues 1 to 294 of 294 are 93.87 pct identical to residues 1 to 294 of 294 from Escherichia coli K-12 : B3003 NP_838529.1 residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B3004 NP_838530.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell NP_838531.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell NP_838532.1 residues 1 to 51 of 51 are 100.00 pct identical to residues 1 to 51 of 51 from Escherichia coli K-12 : B3007 NP_838533.1 catalyzes the formation of L-homocysteine from cystathionine NP_838534.1 residues 1 to 219 of 219 are 84.01 pct identical to residues 1 to 219 of 219 from Escherichia coli K-12 : B3009 NP_838535.1 residues 1 to 375 of 375 are 99.73 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B3010 NP_838536.1 residues 1 to 387 of 387 are 99.48 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B3011 NP_838537.2 methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate NP_838538.1 residues 1 to 308 of 308 are 95.46 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B3013 NP_838539.1 residues 1 to 85 of 85 are 100.00 pct identical to residues 1 to 85 of 85 from Escherichia coli K-12 : B3014 NP_838540.1 residues 1 to 413 of 413 are 99.51 pct identical to residues 1 to 413 of 413 from Escherichia coli K-12 : B3015 NP_838541.1 residues 1 to 470 of 470 are 92.34 pct identical to residues 1 to 470 of 470 from Escherichia coli K-12 : B3017 NP_838542.1 residues 1 to 245 of 245 are 94.69 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B3018 NP_838543.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_838544.1 residues 1 to 160 of 160 are 97.50 pct identical to residues 1 to 160 of 160 from Escherichia coli K-12 : B3023 NP_838545.1 residues 1 to 130 of 130 are 99.23 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B3024 NP_838546.1 response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes NP_838547.1 residues 1 to 424 of 424 are 89.08 pct identical to residues 1 to 449 of 449 from Escherichia coli K-12 : B3026 NP_838548.1 residues 1 to 110 of 110 are 86.36 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B3027 NP_838549.1 residues 1 to 193 of 193 are 98.44 pct identical to residues 1 to 193 of 193 from Escherichia coli K-12 : B3028 NP_838550.1 residues 1 to 104 of 104 are 100.00 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3029 NP_838551.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling NP_838552.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate NP_838553.1 residues 1 to 275 of 275 are 95.99 pct identical to residues 1 to 275 of 275 from Escherichia coli K-12 : B3032 NP_838554.1 residues 1 to 140 of 140 are 100.00 pct identical to residues 1 to 140 of 140 from Escherichia coli K-12 : B3033 NP_838555.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose NP_838556.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell NP_838557.1 residues 1 to 86 of 86 are 100.00 pct identical to residues 1 to 86 of 86 from Escherichia coli K-12 : B3036 NP_838558.2 residues 1 to 234 of 234 are 92.30 pct identical to residues 1 to 234 of 234 from Escherichia coli K-12 : B3037 NP_838559.1 residues 1 to 386 of 386 are 99.74 pct identical to residues 1 to 386 of 386 from Escherichia coli K-12 : B3038 NP_838560.1 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine NP_838561.1 residues 1 to 257 of 257 are 88.71 pct identical to residues 1 to 257 of 257 from Escherichia coli K-12 : B3040 NP_838562.1 DHBP synthase; functions during riboflavin biosynthesis NP_838563.1 residues 1 to 116 of 116 are 99.13 pct identical to residues 1 to 116 of 116 from Escherichia coli K-12 : B3042 NP_838564.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_838565.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_838566.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838567.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838568.1 residues 1 to 91 of 91 are 97.80 pct identical to residues 358 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_838569.1 Involved in glycogen synthesis. May be involved in glycogen priming NP_838570.1 residues 1 to 85 of 99 are 100.00 pct identical to residues 1 to 85 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838571.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose NP_838572.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme NP_838573.1 residues 1 to 433 of 433 are 93.53 pct identical to residues 1 to 433 of 433 from Escherichia coli K-12 : B3054 NP_838574.1 residues 1 to 206 of 206 are 87.37 pct identical to residues 1 to 206 of 206 from Escherichia coli K-12 : B3055 NP_838575.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases NP_838576.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell NP_838577.1 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin NP_838578.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX NP_838579.1 activates expression of genes required for L-tartrate-dependent anaerobic growth on glycerol NP_838580.1 Involved in the tartrate degradation pathway NP_838581.1 Involved in the tartrate degradation pathway NP_838582.1 residues 1 to 487 of 487 are 82.95 pct identical to residues 1 to 487 of 487 from Escherichia coli K-12 : B3063 NP_838583.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity NP_838584.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_838585.1 synthesizes RNA primers at the replication forks NP_838586.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria NP_838587.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_838588.1 residues 1 to 207 of 207 are 83.09 pct identical to residues 1 to 207 of 207 from Escherichia coli K-12 : B3071 NP_838589.2 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate NP_838590.1 residues 1 to 327 of 327 are 99.38 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B3075 NP_838591.1 in Escherichia coli this is the second beta-galactosidase system NP_838592.1 in Escherichia coli this is the second beta-galactosidase system NP_838593.1 residues 1 to 477 of 477 are 92.03 pct identical to residues 1 to 477 of 477 from Escherichia coli K-12 : B3078 NP_838594.1 residues 1 to 783 of 783 are 95.65 pct identical to residues 1 to 783 of 783 from Escherichia coli K-12 : B3080 NP_838595.1 residues 1 to 672 of 672 are 95.23 pct identical to residues 1 to 672 of 672 from Escherichia coli K-12 : B3081 NP_838596.1 residues 1 to 138 of 138 are 90.57 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B3082 NP_838597.1 residues 1 to 104 of 104 are 100.00 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3083 NP_838598.1 residues 1 to 378 of 378 are 95.76 pct identical to residues 11 to 388 of 388 from Escherichia coli K-12 : B3084 NP_838599.1 residues 1 to 179 of 179 are 98.32 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B3085 NP_838600.1 residues 1 to 230 of 230 are 97.82 pct identical to residues 1 to 230 of 230 from Escherichia coli K-12 : B3086 NP_838601.1 residues 1 to 334 of 338 are 98.80 pct identical to residues 1 to 334 of 334 from Escherichia coli K-12 : B3087 NP_838602.1 residues 1 to 320 of 321 are 97.52 pct identical to residues 1 to 320 of 321 from Escherichia coli K-12 : B3088 NP_838603.1 involved in the import of serine and threonine coupled with the import of sodium NP_838604.1 residues 1 to 183 of 183 are 98.36 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B3090 NP_838605.1 residues 1 to 495 of 495 are 96.76 pct identical to residues 1 to 495 of 495 from Escherichia coli K-12 : B3091 NP_838606.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism NP_838607.1 residues 1 to 432 of 432 are 89.58 pct identical to residues 41 to 472 of 472 from Escherichia coli K-12 : B3093 NP_838608.1 residues 1 to 200 of 210 are 33.81 pct identical to residues 161 to 350 of 359 from GenPept : >emb|CAD08773.1| (AL627266) fimbrail protein [Salmonella enterica subsp. enterica serovar Typhi] NP_838609.1 residues 1 to 645 of 663 are 31.39 pct identical to residues 237 to 878 of 895 from GenPept : >emb|CAD08772.1| (AL627266) outer membrane fimbrial user protein [Salmonella enterica subsp. enterica serovar Typhi] NP_838610.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838611.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838612.1 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization. NP_838613.1 residues 15 to 220 of 220 are 100.00 pct identical to residues 15 to 220 of 220 from Escherichia coli K-12 : B3095 NP_838614.1 residues 1 to 122 of 122 are 85.24 pct identical to residues 6 to 127 of 127 from Escherichia coli K-12 : B3096 NP_838615.1 residues 1 to 82 of 101 are 78.04 pct identical to residues 1 to 82 of 101 from Escherichia coli K-12 : B3098 NP_838616.1 residues 1 to 134 of 134 are 67.16 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B3099 NP_838617.1 residues 1 to 99 of 99 are 95.95 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B3100 NP_838618.1 residues 1 to 328 of 328 are 95.42 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B3102 NP_838619.1 residues 1 to 120 of 122 are 99.16 pct identical to residues 1 to 120 of 121 from Escherichia coli K-12 : B3103 NP_838620.1 residues 1 to 298 of 298 are 99.66 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B3105 NP_838621.1 residues 1 to 233 of 233 are 99.14 pct identical to residues 1 to 233 of 233 from Escherichia coli K-12 : B3106 NP_838622.1 residues 1 to 54 of 54 are 94.44 pct identical to residues 3 to 56 of 56 from Escherichia coli K-12 : B3107 NP_838623.1 residues 1 to 188 of 188 are 92.02 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B3108 NP_838624.1 residues 1 to 184 of 269 are 73.36 pct identical to residues 1 to 184 of 187 from Escherichia coli K-12 : B3109 NP_838625.1 residues 21 to 443 of 443 are 96.69 pct identical to residues 3 to 425 of 425 from Escherichia coli K-12 : B3110 NP_838626.1 residues 1 to 453 of 454 are 71.74 pct identical to residues 1 to 453 of 454 from Escherichia coli K-12 : B1814 NP_838627.1 residues 1 to 129 of 129 are 100.00 pct identical to residues 22 to 150 of 150 from Escherichia coli K-12 : B3113 NP_838628.1 residues 1 to 741 of 764 are 97.97 pct identical to residues 1 to 741 of 746 from Escherichia coli K-12 : B3114 NP_838629.2 catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism NP_838630.1 involved in the import of threonine and serine in combination with the import of a proton NP_838631.1 catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic NP_838632.1 regulates the tdcABCDEFG operon which is involved in amino acid degradation NP_838633.1 participates in controlling the expression of several structural genes for the enzyme threonine dehydratase; TdcR activates the tdcABCDEFG operon NP_838634.1 residues 1 to 54 of 54 are 96.29 pct identical to residues 1 to 54 of 54 from Escherichia coli K-12 : B3122 NP_838635.2 residues 1 to 408 of 408 are 94.60 pct identical to residues 1 to 408 of 408 from Escherichia coli K-12 : B3124 NP_838636.2 catalyzes the reduction of tartronate semialdehyde to glycerate NP_838637.1 residues 1 to 444 of 444 are 95.94 pct identical to residues 1 to 444 of 444 from Escherichia coli K-12 : B3127 NP_838638.1 residues 1 to 523 of 523 are 94.26 pct identical to residues 1 to 523 of 523 from Escherichia coli K-12 : B3128 NP_838639.1 transcriptional repressor for the agaZVWA and agaSYBCDI operons NP_838640.1 residues 1 to 426 of 426 are 99.29 pct identical to residues 1 to 426 of 426 from Escherichia coli K-12 : B3132 NP_838641.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport NP_838642.1 residues 1 to 125 of 259 are 65.60 pct identical to residues 1 to 125 of 133 from Escherichia coli K-12 : B3134; PTS transport NP_838643.1 residues 1 to 269 of 269 are 99.25 pct identical to residues 1 to 269 of 292 from GenPept : >gb|AAG58265.1|AE005542_7 (AE005542) phosphotransferase system enzyme subunit [Escherichia coli O157:H7 EDL933]; PTS transport NP_838644.1 residues 1 to 144 of 144 are 98.61 pct identical to residues 1 to 144 of 144 from GenPept : >gb|AAG58266.1|AE005542_8 (AE005542) phosphotransferase system enzyme subunit [Escherichia coli O157:H7 EDL933]; PTS transport NP_838645.1 residues 1 to 139 of 147 are 96.40 pct identical to residues 8 to 146 of 384 from GenPept : >gb|AAF81087.1|AF228498_7 (AF228498) AgaA [Escherichia coli] NP_838646.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838647.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_838648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport NP_838649.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport NP_838650.1 residues 1 to 251 of 251 are 93.62 pct identical to residues 1 to 251 of 251 from Escherichia coli K-12 : B3141 NP_838651.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838652.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838653.1 residues 1 to 231 of 231 are 99.13 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B3143 NP_838654.1 residues 1 to 140 of 140 are 98.57 pct identical to residues 162 to 301 of 301 from GenPept : >gb|AAD10297.1| (U82084) unknown [bacteriophage SfX]; partial NP_838655.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_838656.1 residues 1 to 363 of 363 are 95.31 pct identical to residues 1 to 363 of 363 from Escherichia coli K-12 : B3145 NP_838657.1 residues 1 to 286 of 286 are 91.95 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B3146 NP_838658.1 residues 1 to 678 of 678 are 88.93 pct identical to residues 1 to 678 of 678 from Escherichia coli K-12 : B3147 NP_838659.1 residues 1 to 131 of 131 are 98.47 pct identical to residues 1 to 131 of 131 from Escherichia coli K-12 : B3148 NP_838660.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein NP_838661.1 residues 1 to 191 of 191 are 90.57 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B3150 NP_838662.1 residues 1 to 346 of 346 are 93.64 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B3151 NP_838663.1 residues 1 to 226 of 226 are 98.67 pct identical to residues 1 to 226 of 226 from Escherichia coli K-12 : B3152 NP_838664.1 residues 1 to 186 of 186 are 98.92 pct identical to residues 1 to 186 of 186 from Escherichia coli K-12 : B3153 NP_838665.1 residues 1 to 147 of 147 are 100.00 pct identical to residues 1 to 147 of 147 from Escherichia coli K-12 : B3154 NP_838666.1 residues 1 to 100 of 100 are 99.00 pct identical to residues 1 to 100 of 100 from Escherichia coli K-12 : B3155 NP_838667.1 residues 1 to 167 of 167 are 99.40 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B3156 NP_838668.1 residues 1 to 174 of 174 are 98.85 pct identical to residues 1 to 174 of 174 from Escherichia coli K-12 : B3157 NP_838669.1 residues 1 to 331 of 331 are 94.25 pct identical to residues 1 to 331 of 331 from Escherichia coli K-12 : B3158 NP_838670.1 residues 1 to 292 of 292 are 98.63 pct identical to residues 7 to 298 of 298 from Escherichia coli K-12 : B3159 NP_838671.1 residues 1 to 335 of 335 are 99.40 pct identical to residues 1 to 335 of 335 from Escherichia coli K-12 : B3160 NP_838672.1 tryptophan transporter of high affinity NP_838673.2 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division NP_838674.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing NP_838675.1 residues 1 to 713 of 734 are 93.54 pct identical to residues 1 to 713 of 734 from Escherichia coli K-12 : B3164; cytidylate kinase activity NP_838676.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence NP_838677.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs NP_838678.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock NP_838679.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex NP_838680.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination NP_838681.2 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins NP_838682.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis NP_838683.1 residues 1 to 160 of 160 are 99.37 pct identical to residues 388 to 547 of 547 from Escherichia coli K-12 : B3173 NP_838684.1 residues 1 to 110 of 110 are 99.09 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B3175 NP_838685.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate NP_838686.2 catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate NP_838687.1 inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins NP_838688.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit NP_838689.1 RNA binding protein found associated to pre-50S subunit of the ribosome; role in ribosome assembly; necessary for optimal growth but not cell viability NP_838690.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus NP_838691.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains NP_838692.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication NP_838693.1 residues 1 to 321 of 321 are 95.01 pct identical to residues 1 to 321 of 321 from Escherichia coli K-12 : B3184 NP_838694.1 involved in the peptidyltransferase reaction during translation NP_838695.1 residues 1 to 103 of 103 are 100.00 pct identical to residues 1 to 103 of 103 from Escherichia coli K-12 : B3186 NP_838696.1 residues 1 to 323 of 323 are 96.59 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B3187 NP_838697.1 activator of maltose metabolism genes NP_838698.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active NP_838699.1 residues 1 to 89 of 89 are 100.00 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B3190 NP_838700.1 residues 1 to 129 of 129 are 92.24 pct identical to residues 1 to 129 of 129 from Escherichia coli K-12 : B3191 NP_838701.1 residues 1 to 211 of 211 are 100.00 pct identical to residues 1 to 211 of 211 from Escherichia coli K-12 : B3192 NP_838702.1 residues 1 to 183 of 183 are 90.71 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B3193 NP_838703.1 residues 1 to 260 of 260 are 100.00 pct identical to residues 1 to 260 of 260 from Escherichia coli K-12 : B3194 NP_838704.1 ATP-binding subunit of a ABC toluene efflux transporter NP_838705.1 YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers NP_838706.1 residues 1 to 328 of 328 are 96.34 pct identical to residues 1 to 328 of 328 from Escherichia coli K-12 : B3197 NP_838707.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis NP_838708.1 residues 1 to 191 of 191 are 100.00 pct identical to residues 1 to 191 of 191 from Escherichia coli K-12 : B3199 NP_838709.1 LptA; periplasmic binding protein part of a ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system NP_838710.1 residues 1 to 241 of 241 are 96.68 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B3201 NP_838711.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen NP_838712.1 YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing NP_838713.1 residues 1 to 163 of 163 are 100.00 pct identical to residues 1 to 163 of 163 from Escherichia coli K-12 : B3204; regulates N metabolism NP_838714.1 residues 1 to 284 of 284 are 95.77 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B3205 NP_838715.1 residues 1 to 90 of 90 are 100.00 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B3206; HPr-like, nitrogen related, exchangesphosphate with Enzymei, Hpr NP_838716.1 residues 1 to 210 of 210 are 93.33 pct identical to residues 1 to 210 of 210 from Escherichia coli K-12 : B3207 NP_838717.1 residues 1 to 217 of 217 are 94.47 pct identical to residues 4 to 220 of 220 from Escherichia coli K-12 : B3209 NP_838718.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA NP_838719.1 residues 1 to 309 of 309 are 99.67 pct identical to residues 1 to 309 of 309 from Escherichia coli K-12 : B3211 NP_838720.2 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate NP_838721.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate NP_838722.1 residues 1 to 257 of 356 are 86.04 pct identical to residues 36 to 293 of 307 from GenPept : >gb|AAF28144.1|AF153317_45 (AF153317) InsB [Shigella dysenteriae] NP_838723.1 residues 1 to 154 of 154 are 90.25 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B3221 NP_838724.2 catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein NP_838725.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate NP_838726.2 residues 1 to 506 of 506 are 89.72 pct identical to residues 1 to 506 of 506 from Escherichia coli K-12 : B3224 NP_838727.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid NP_838728.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization NP_838729.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838730.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838731.1 YhcL; uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters; probable role in transport of carboxylates across the inner membrane from the periplasm; its encoding gene is not essential for growth and is probably cryptic NP_838732.1 residues 1 to 133 of 165 are 100.00 pct identical to residues 1 to 133 of 165 from Escherichia coli K-12 : B3228 NP_838733.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation NP_838734.1 forms a direct contact with the tRNA during translation NP_838735.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit NP_838736.1 residues 1 to 375 of 375 are 98.66 pct identical to residues 1 to 375 of 375 from Escherichia coli K-12 : B3232 NP_838737.1 residues 1 to 132 of 132 are 78.03 pct identical to residues 3 to 134 of 134 from Escherichia coli K-12 : B3233 NP_838738.1 residues 1 to 355 of 355 are 89.85 pct identical to residues 1 to 355 of 355 from Escherichia coli K-12 : B3235 NP_838739.1 oxidizes malate to oxaloacetate NP_838740.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes NP_838741.1 residues 1 to 104 of 104 are 83.65 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3238 NP_838742.1 residues 1 to 90 of 90 are 98.88 pct identical to residues 1 to 90 of 90 from Escherichia coli K-12 : B3239 NP_838743.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate NP_838744.1 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate NP_838745.2 membrane protein AaeX; the gene is a member of the aaeXAB operon NP_838746.1 residues 1 to 303 of 303 are 99.66 pct identical to residues 7 to 309 of 309 from Escherichia coli K-12 : B3243 NP_838747.1 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA NP_838748.1 residues 1 to 986 of 986 are 99.49 pct identical to residues 1 to 986 of 986 from Escherichia coli K-12 : B3245 NP_838749.1 involved in the processing of the 5'end of 16S rRNA NP_838750.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_838751.1 part of cell wall structural complex MreBCD; transmembrane component NP_838752.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall NP_838753.2 functions in MreBCD complex in some organisms NP_838754.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules NP_838755.1 residues 1 to 324 of 324 are 90.74 pct identical to residues 1 to 324 of 324 from Escherichia coli K-12 : B3253 NP_838756.1 residues 1 to 33 of 33 are 100.00 pct identical to residues 1 to 33 of 33 from Escherichia coli K-12 : B3254 NP_838757.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_838758.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_838759.1 residues 1 to 80 of 80 are 97.50 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B3257 NP_838760.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase NP_838761.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype NP_838762.1 residues 1 to 280 of 280 are 99.64 pct identical to residues 42 to 321 of 321 from Escherichia coli K-12 : B3260 NP_838763.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription NP_838764.1 residues 1 to 294 of 294 are 97.95 pct identical to residues 3 to 296 of 296 from Escherichia coli K-12 : B3262 NP_838765.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838766.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838767.1 residues 1 to 305 of 305 are 99.01 pct identical to residues 1 to 305 of 305 from Escherichia coli K-12 : B3268 NP_838768.1 residues 1 to 97 of 97 are 82.47 pct identical to residues 71 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_838769.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838770.1 residues 1 to 367 of 367 are 98.91 pct identical to residues 2 to 368 of 368 from Escherichia coli K-12 : B3270 NP_838771.1 residues 1 to 252 of 252 are 98.41 pct identical to residues 1 to 252 of 252 from Escherichia coli K-12 : B3271 NP_838772.1 residues 1 to 256 of 256 are 100.00 pct identical to residues 1 to 256 of 256 from Escherichia coli K-12 : B3279 NP_838773.1 residues 1 to 85 of 85 are 100.00 pct identical to residues 1 to 85 of 85 from Escherichia coli K-12 : B3280 NP_838774.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate NP_838775.1 RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA NP_838776.1 residues 1 to 162 of 162 are 95.06 pct identical to residues 8 to 169 of 169 from Escherichia coli K-12 : B3283 NP_838777.1 residues 1 to 152 of 152 are 100.00 pct identical to residues 6 to 157 of 157 from Escherichia coli K-12 : B3284 NP_838778.1 residues 1 to 374 of 374 are 97.59 pct identical to residues 1 to 374 of 374 from NRprotein_Feb2003 : >ref|NP_289847.1| smf gene product [Escherichia coli O157:H7 EDL933] pir||C85993 hypothetical protein smf [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gb|AAG58407.1|AE005555_7 smf gene product [Escherichia coli O157:H7 EDL933] NP_838779.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_838780.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth NP_838781.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase NP_838782.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain NP_838783.1 residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_838784.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706) IS orf [Shigella flexneri] NP_838785.1 residues 1 to 533 of 533 are 96.99 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_838786.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive NP_838787.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family NP_838788.1 residues 1 to 80 of 80 are 98.75 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B4026 NP_838789.1 residues 1 to 222 of 222 are 93.69 pct identical to residues 1 to 222 of 222 from Escherichia coli K-12 : B4027 NP_838790.1 residues 1 to 245 of 245 are 90.20 pct identical to residues 1 to 245 of 245 from Escherichia coli K-12 : B4028 NP_838791.1 residues 1 to 698 of 698 are 99.57 pct identical to residues 1 to 698 of 698 from Escherichia coli K-12 : B4029 NP_838792.1 residues 1 to 136 of 136 are 84.55 pct identical to residues 1 to 136 of 136 from Escherichia coli K-12 : B4030 NP_838793.1 xylose/proton symporter; member of the major facilitator superfamily (MFS) of transporter NP_838794.1 with MalKFE is involved in the transport of maltose into the cell NP_838795.1 with MalKGE is involved in maltose transport into the cell NP_838796.1 functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis NP_838797.1 with malEFG is involved in import of maltose/maltodextrin NP_838798.1 porin involved in the transport of maltose and maltodextrins NP_838799.1 residues 1 to 306 of 306 are 80.71 pct identical to residues 1 to 306 of 306 from Escherichia coli K-12 : B4037 NP_838800.1 catalyzes the formation of 4-hydroxybenzoate from chorismate NP_838801.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway NP_838802.2 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA NP_838803.1 residues 1 to 122 of 122 are 90.16 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B4042 NP_838804.1 Represses a number of genes involved in the response to DNA damage NP_838805.2 residues 1 to 459 of 459 are 83.22 pct identical to residues 1 to 459 of 459 from Escherichia coli K-12 : B4044 NP_838806.1 unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential NP_838807.2 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB NP_838808.1 residues 1 to 235 of 235 are 90.63 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B4048 NP_838809.1 residues 1 to 339 of 339 are 95.87 pct identical to residues 7 to 345 of 345 from Escherichia coli K-12 : B4049 NP_838810.2 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia NP_838811.1 residues 1 to 327 of 327 are 94.49 pct identical to residues 1 to 327 of 327 from Escherichia coli K-12 : B4051 NP_838812.1 unwinds double stranded DNA NP_838813.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer NP_838814.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate NP_838815.1 Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity NP_838816.1 residues 1 to 138 of 138 are 99.27 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B4056 NP_838817.1 residues 1 to 118 of 118 are 99.15 pct identical to residues 1 to 118 of 118 from Escherichia coli K-12 : B4057 NP_838818.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate NP_838819.1 binds to single stranded DNA and PriA helcase facilitate replication restart NP_838820.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_838821.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838822.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from Escherichia coli K-12 : B4060 NP_838823.1 regulates genes involved in response to oxidative stress NP_838824.1 residues 1 to 154 of 154 are 100.00 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B4063 NP_838825.1 residues 1 to 449 of 449 are 86.63 pct identical to residues 1 to 449 of 449 from Escherichia coli K-12 : B4064 NP_838826.1 residues 1 to 527 of 549 are 85.95 pct identical to residues 1 to 527 of 549 from Escherichia coli K-12 : B4065 NP_838827.1 residues 1 to 430 of 430 are 85.81 pct identical to residues 1 to 430 of 430 from Escherichia coli K-12 : B4066 NP_838828.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake NP_838829.1 residues 1 to 104 of 104 are 89.42 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B4068 NP_838830.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552 NP_838831.1 part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia NP_838832.1 residues 1 to 223 of 223 are 100.00 pct identical to residues 1 to 223 of 223 from Escherichia coli K-12 : B4072; Fe-S centers NP_838833.1 residues 1 to 318 of 318 are 86.16 pct identical to residues 1 to 318 of 318 from Escherichia coli K-12 : B4073 NP_838834.1 with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552 NP_838835.1 residues 1 to 102 of 127 are 86.27 pct identical to residues 1 to 102 of 127 from Escherichia coli K-12 : B4075 NP_838836.1 residues 1 to 198 of 198 are 98.48 pct identical to residues 1 to 198 of 198 from Escherichia coli K-12 : B4076 NP_838837.1 carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system NP_838838.1 residues 1 to 222 of 222 are 100.00 pct identical to residues 8 to 229 of 229 from Escherichia coli K-12 : B4078 NP_838839.1 part of a multidrug efflux system involved in resistance to acriflavin, puromycin, erytjhromycin and tetraphenylarsonium chloride; member of the outer membrane factor (OMF) family NP_838840.2 possibly part of a tripartite efflux system composed of MdtN, MdtO and MdtP which could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride NP_838841.1 with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride NP_838842.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838843.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_838844.1 residues 1 to 68 of 74 are 98.52 pct identical to residues 1 to 68 of 206 from Escherichia coli K-12 : B4104 NP_838845.1 residues 1 to 338 of 338 are 98.52 pct identical to residues 1 to 338 of 338 from Escherichia coli K-12 : B4105 NP_838846.1 residues 1 to 262 of 262 are 98.09 pct identical to residues 1 to 262 of 262 from Escherichia coli K-12 : B4106 NP_838847.1 residues 1 to 147 of 147 are 99.31 pct identical to residues 1 to 147 of 147 from Escherichia coli K-12 : B4107 NP_838848.1 residues 1 to 111 of 111 are 100.00 pct identical to residues 1 to 111 of 111 from Escherichia coli K-12 : B4108 NP_838849.1 residues 1 to 742 of 742 are 95.28 pct identical to residues 1 to 742 of 742 from Escherichia coli K-12 : B4109 NP_838850.1 residues 1 to 281 of 281 are 97.15 pct identical to residues 1 to 281 of 281 from Escherichia coli K-12 : B4110 NP_838851.1 residues 1 to 500 of 500 are 97.00 pct identical to residues 1 to 500 of 500 from Escherichia coli K-12 : B4111 NP_838852.1 residues 4 to 366 of 366 are 99.17 pct identical to residues 1 to 363 of 363 from Escherichia coli K-12 : B4112 NP_838853.1 response regulator in two-component regulatory system with BasS NP_838854.1 with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division NP_838855.1 residues 1 to 445 of 445 are 92.35 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B4115 NP_838856.1 residues 1 to 253 of 253 are 93.28 pct identical to residues 1 to 253 of 253 from Escherichia coli K-12 : B4116 NP_838857.1 residues 1 to 755 of 755 are 99.47 pct identical to residues 2 to 756 of 756 from Escherichia coli K-12 : B4117 NP_838858.1 residues 1 to 302 of 302 are 99.66 pct identical to residues 1 to 302 of 302 from Escherichia coli K-12 : B4118 NP_838859.1 residues 1 to 451 of 451 are 98.89 pct identical to residues 1 to 451 of 451 from Escherichia coli K-12 : B4119 NP_838860.1 residues 1 to 469 of 469 are 96.37 pct identical to residues 1 to 469 of 469 from Escherichia coli K-12 : B4120 NP_838861.1 residues 1 to 209 of 209 are 83.25 pct identical to residues 1 to 209 of 209 from Escherichia coli K-12 : B4121 NP_838862.1 residues 1 to 548 of 548 are 96.35 pct identical to residues 1 to 548 of 548 from Escherichia coli K-12 : B4122; anaerobic isozyme NP_838863.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters NP_838864.1 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration NP_838865.1 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration NP_838866.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_838867.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_838868.1 catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA NP_838869.1 residues 1 to 315 of 315 are 98.73 pct identical to residues 8 to 322 of 322 from GenPept : >gb|AAG59220.1|AE005634_10 (AE005634) transcriptional regulator of sorbose uptake and utilization genes [Escherichia coli O157:H7 EDL933] NP_838870.1 Converts D-sorbitol-dphosphate to D-fructose-6-phosphate NP_838871.1 residues 1 to 135 of 135 are 97.03 pct identical to residues 1 to 135 of 135 from GenPept : >gb|AAG59218.1|AE005634_8 (AE005634) sorbose PTS component [Escherichia coli O157:H7 EDL933] NP_838872.1 residues 1 to 164 of 164 are 99.39 pct identical to residues 1 to 164 of 164 from GenPept : >gb|AAG59217.1|AE005634_7 (AE005634) sorbose PTS component [Escherichia coli O157:H7 EDL933] NP_838873.1 residues 1 to 246 of 246 are 86.99 pct identical to residues 20 to 265 of 265 from GenPept : >gb|AAG59216.1|AE005634_6 (AE005634) sorbose PTS component [Escherichia coli O157:H7 EDL933] NP_838874.1 residues 1 to 262 of 262 are 82.48 pct identical to residues 1 to 274 of 274 from GenPept : >gb|AAG59215.1|AE005634_5 (AE005634) sorbose PTS component [Escherichia coli O157:H7 EDL933] NP_838875.1 residues 1 to 409 of 409 are 95.11 pct identical to residues 5 to 413 of 413 from GenPept : >gb|AAG59214.1|AE005634_4 (AE005634) L-sorbose-1-P-reductase [Escherichia coli O157:H7 EDL933] NP_838876.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family NP_838877.1 residues 16 to 543 of 543 are 87.50 pct identical to residues 16 to 543 of 543 from Escherichia coli K-12 : B4020 NP_838878.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity NP_838879.2 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase NP_838880.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates NP_838881.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis NP_838882.1 residues 1 to 146 of 147 are 96.57 pct identical to residues 1 to 146 of 147 from Escherichia coli K-12 : B4012 NP_838883.1 involved in de novo purine biosynthesis NP_838884.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis NP_838885.1 DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein NP_838886.1 residues 1 to 458 of 458 are 74.40 pct identical to residues 1 to 465 of 465 from Escherichia coli K-12 : B4003 NP_838887.2 residues 1 to 166 of 188 are 91.56 pct identical to residues 1 to 166 of 188 from Escherichia coli K-12 : B4002 NP_838888.1 residues 1 to 231 of 231 are 94.37 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B4001 NP_838889.1 histone-like DNA-binding protein NP_838890.1 residues 1 to 196 of 196 are 98.97 pct identical to residues 1 to 196 of 196 from Escherichia coli K-12 : B3999 NP_838891.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures NP_838892.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III NP_838893.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates NP_838894.1 binds specifically to the major sigma factor sigma 70; active in stationary phase NP_838895.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine NP_838896.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate NP_838897.1 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate NP_838898.2 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate NP_838899.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center NP_838900.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter NP_838901.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme NP_838902.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors NP_838903.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit NP_838904.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA NP_838905.1 binds directly to 23S ribosomal RNA NP_838906.1 Modulates Rho-dependent transcription termination NP_838907.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force NP_838908.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_838909.1 residues 1 to 51 of 51 are 98.03 pct identical to residues 1 to 51 of 51 from Escherichia coli K-12 : B3975 NP_838910.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis NP_838911.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon NP_838912.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis NP_838913.2 converts L-glutamate to D-glutamate, a component of peptidoglycan NP_838914.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space NP_838915.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs NP_838916.1 residues 1 to 119 of 119 are 99.15 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B3964 NP_838917.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis NP_838918.2 catalyzes the conversion of NADPH to NADH NP_838919.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA NP_838920.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_838921.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838922.1 residues 1 to 404 of 404 are 90.59 pct identical to residues 1 to 404 of 404 from Escherichia coli K-12 : B1581 NP_838923.1 residues 1 to 442 of 442 are 99.54 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_838924.1 catalyzes the formation of arginine from (N-L-arginino)succinate NP_838925.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate NP_838926.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate NP_838927.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis NP_838928.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate NP_838929.1 residues 1 to 577 of 577 are 94.80 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 : B3955 NP_838930.1 residues 1 to 283 of 283 are 98.58 pct identical to residues 1 to 283 of 283 from Escherichia coli K-12 : B3954 NP_838931.1 FrwD with FrwB, FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; phosphorylated by EIIA; FrwB homolog NP_838932.1 residues 1 to 292 of 292 are 94.86 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B3952 NP_838933.1 involved in production of D-lactate from glucose under microaerobic conditions; cytoplasmic protein NP_838934.1 FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS NP_838935.1 FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site NP_838936.1 residues 1 to 726 of 726 are 96.28 pct identical to residues 1 to 726 of 726 from Escherichia coli K-12 : B3942 NP_838937.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor NP_838938.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways NP_838939.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine NP_838940.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis NP_838941.1 member of the NlpC/P60 superfamily of peptidases NP_838942.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome NP_838943.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity NP_838944.1 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins NP_838945.1 residues 1 to 319 of 319 are 76.48 pct identical to residues 1 to 319 of 319 from Escherichia coli K-12 : B3933 NP_838946.1 heat shock protein involved in degradation of misfolded proteins NP_838947.1 heat shock protein involved in degradation of misfolded proteins NP_838948.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate NP_838949.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity NP_838950.1 residues 1 to 81 of 81 are 100.00 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B3928 NP_838951.1 residues 1 to 214 of 214 are 91.12 pct identical to residues 1 to 214 of 281 from Escherichia coli K-12 : B3927 NP_838952.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP NP_838953.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese NP_838954.1 residues 1 to 248 of 248 are 99.19 pct identical to residues 1 to 248 of 248 from Escherichia coli K-12 : B3924 NP_838955.1 with UspC and Usp E is involved in resistance to UV radiation NP_838956.1 residues 1 to 99 of 99 are 85.85 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B3922 NP_838957.1 residues 1 to 199 of 199 are 95.97 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B3920 NP_838958.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate NP_838959.1 residues 1 to 251 of 251 are 90.83 pct identical to residues 1 to 251 of 251 from Escherichia coli K-12 : B3918 NP_838960.1 residues 1 to 329 of 329 are 96.65 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 : B3917 NP_838961.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis NP_838962.1 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers NP_838963.2 repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates NP_838964.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system NP_838965.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors NP_838966.1 residues 1 to 224 of 224 are 92.85 pct identical to residues 11 to 234 of 234 from Escherichia coli K-12 : B3910 NP_838967.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_838968.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_838969.1 transports degraded pectin products into the bacterial cell NP_838970.1 SodA; manganese binding; only present under aerobic conditions; destroys free radicals NP_838971.1 activates the expression of rhaRS in response to L-rhamnose NP_838972.1 activates the expression of the rhaBAD operon and rhaT gene NP_838973.1 catalyzes the ATP-dependent phosphorylation of rhamnulose NP_838974.1 catalyzes the formation of L-rhamnulose from L-rhamnose NP_838975.1 residues 1 to 213 of 213 are 99.06 pct identical to residues 62 to 274 of 274 from Escherichia coli K-12 : B3902 NP_838976.1 residues 1 to 104 of 104 are 99.03 pct identical to residues 1 to 104 of 104 from Escherichia coli K-12 : B3901 NP_838977.1 with FrvBRX is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system involved in the transport and phosphorylation of sugars; possibly responsible for the sugar specificity of the system NP_838978.1 residues 1 to 483 of 483 are 94.20 pct identical to residues 3 to 485 of 485 from Escherichia coli K-12 : B3899 NP_838979.1 with FrvABR is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system which may be involved in the transport and phosphorylation of sugars NP_838980.1 residues 1 to 210 of 216 are 95.23 pct identical to residues 1 to 210 of 582 from Escherichia coli K-12 : B3897 NP_838981.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838982.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18549.1|AF348706_238 (AF348706) iso-IS1 orfB [Shigella flexneri] NP_838983.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth NP_838984.1 residues 1 to 1016 of 1016 are 99.61 pct identical to residues 1 to 1016 of 1016 from Escherichia coli K-12 : B3894; selenocysteine NP_838985.1 residues 1 to 284 of 300 are 96.12 pct identical to residues 1 to 284 of 300 from Escherichia coli K-12 : B3893 NP_838986.1 cytochrome b556(FDO) component; heme containing NP_838987.1 required for the formation of active formate dehydrogenase NP_838988.1 residues 1 to 80 of 80 are 100.00 pct identical to residues 1 to 80 of 80 from Escherichia coli K-12 : B3890 NP_838989.1 residues 1 to 81 of 81 are 98.76 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B3889 NP_838990.1 residues 78 to 381 of 381 are 94.73 pct identical to residues 1 to 304 of 304 from NRprotein_Feb03 : >ref|NP_290516.1| Z5429 gene product [Escherichia coli O157:H7 EDL933] ref|NP_312840.1| hypothetical protein [Escherichia coli O157:H7] pir||D86077 hypothetical protein Z5429 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) pir||E91230 hypothetical protein ECs4813 [imported] - Escher NP_838991.1 residues 1 to 75 of 83 are 97.33 pct identical to residues 121 to 195 of 330 from NRprotein_Feb03 : >ref|NP_290515.1| Z5428 gene product [Escherichia coli O157:H7 EDL933] pir||C86077 hypothetical protein Z5428 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gb|AAG59079.1|AE005620_1 Z5428 gene product [Escherichia coli O157:H7 EDL933] NP_838992.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_838993.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_838994.1 residues 1 to 329 of 329 are 99.08 pct identical to residues 1 to 329 of 329 from Escherichia coli K-12 : B3888 NP_838995.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine NP_838996.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease NP_838997.1 residues 1 to 199 of 199 are 100.00 pct identical to residues 8 to 206 of 206 from Escherichia coli K-12 : B3885 NP_838998.1 residues 1 to 261 of 261 are 99.61 pct identical to residues 9 to 269 of 269 from Escherichia coli K-12 : B3884 NP_838999.1 residues 1 to 298 of 298 are 89.93 pct identical to residues 3 to 300 of 300 from Escherichia coli K-12 : B3883 NP_839000.1 residues 1 to 298 of 298 are 90.60 pct identical to residues 1 to 298 of 298 from Escherichia coli K-12 : B3882 NP_839001.1 residues 1 to 292 of 292 are 94.17 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B3881 NP_839002.1 residues 1 to 413 of 413 are 99.51 pct identical to residues 6 to 418 of 418 from Escherichia coli K-12 : B3880 NP_839003.1 residues 1 to 300 of 300 are 98.66 pct identical to residues 9 to 308 of 308 from Escherichia coli K-12 : B3879 NP_839004.1 residues 1 to 678 of 678 are 97.49 pct identical to residues 1 to 678 of 678 from Escherichia coli K-12 : B3878 NP_839005.1 residues 1 to 462 of 467 are 98.70 pct identical to residues 3 to 464 of 487 from Escherichia coli K-12 : B3876 NP_839006.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839007.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839008.1 residues 1 to 344 of 352 are 95.93 pct identical to residues 1 to 344 of 421 from Escherichia coli K-12 : B3874 NP_839009.1 residues 1 to 326 of 326 are 99.07 pct identical to residues 1 to 326 of 326 from Escherichia coli K-12 : B3873 NP_839010.1 residues 1 to 236 of 236 are 100.00 pct identical to residues 1 to 236 of 236 from Escherichia coli K-12 : B3872 NP_839011.1 residues 1 to 591 of 607 are 94.92 pct identical to residues 1 to 591 of 591 from Escherichia coli K-12 : B3871 NP_839012.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme NP_839013.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation NP_839014.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54 NP_839015.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_839016.1 residues 1 to 169 of 169 are 78.69 pct identical to residues 1 to 169 of 169 from Escherichia coli K-12 : B3866 NP_839017.2 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential NP_839018.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair NP_839019.1 residues 1 to 310 of 310 are 91.93 pct identical to residues 1 to 310 of 310 from Escherichia coli K-12 : B3862 NP_839020.1 residues 1 to 490 of 490 are 97.14 pct identical to residues 1 to 490 of 490 from Escherichia coli K-12 : B3861 NP_839021.1 residues 1 to 208 of 208 are 99.51 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B3860; essential for cytochrome c synthesis and formate-dependent reduction NP_839022.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages NP_839023.1 residues 1 to 89 of 89 are 98.87 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B3858 NP_839024.1 Links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis NP_839025.1 residues 6 to 175 of 175 are 98.82 pct identical to residues 1 to 170 of 170 from Escherichia coli K-12 : B3856 NP_839026.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX NP_839027.1 residues 1 to 417 of 483 are 93.28 pct identical to residues 1 to 417 of 432 from Escherichia coli K-12 : B3849; requires trkE NP_839028.1 residues 1 to 204 of 204 are 94.60 pct identical to residues 2 to 205 of 205 from Escherichia coli K-12 : B3848 NP_839029.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters NP_839030.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids NP_839031.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids NP_839032.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin NP_839033.1 catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol NP_839034.1 residues 1 to 162 of 162 are 98.76 pct identical to residues 1 to 162 of 162 from Escherichia coli K-12 : B3842; affects biosynthesis of lipopolysaccharide core, F pilin, and hemolysin NP_839035.1 magnesium dependent; not involved in the Sec-independent protein export system NP_839036.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane NP_839037.1 mediates the export of protein precursors bearing twin-arginine signal peptides NP_839038.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes NP_839039.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions NP_839040.1 residues 1 to 201 of 201 are 100.00 pct identical to residues 1 to 201 of 201 from Escherichia coli K-12 : B3834 NP_839041.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone NP_839042.1 YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner NP_839043.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway NP_839044.1 no significant similarities NP_839045.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine NP_839046.1 residues 1 to 317 of 317 are 94.95 pct identical to residues 1 to 317 of 317 from Escherichia coli K-12 : B3828 NP_839047.1 residues 1 to 299 of 299 are 94.64 pct identical to residues 1 to 299 of 299 from Escherichia coli K-12 : B3827 NP_839048.1 purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium NP_839049.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates NP_839050.1 residues 1 to 138 of 138 are 87.68 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B3824 NP_839051.1 residues 1 to 122 of 122 are 90.16 pct identical to residues 1 to 122 of 122 from Escherichia coli K-12 : B3823 NP_839052.1 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway NP_839053.1 catalyzes the hydrolysis of phosphatidylcholine NP_839054.2 residues 1 to 161 of 161 are 100.00 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B3820 NP_839055.1 residues 4 to 296 of 296 are 92.49 pct identical to residues 8 to 300 of 300 from Escherichia coli K-12 : B3819 NP_839056.1 residues 1 to 138 of 138 are 82.60 pct identical to residues 1 to 138 of 138 from Escherichia coli K-12 : B3818 NP_839057.1 residues 1 to 126 of 126 are 99.20 pct identical to residues 1 to 126 of 126 from Escherichia coli K-12 : B3817 NP_839058.1 responsible for the influx of magnesium ions NP_839059.1 residues 1 to 112 of 112 are 98.21 pct identical to residues 1 to 112 of 161 from Escherichia coli K-12 : B3815 NP_839060.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_839061.1 residues 1 to 99 of 99 are 97.97 pct identical to residues 1 to 99 of 99 from Escherichia coli K-12 : B3814 NP_839062.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. NP_839063.1 YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function NP_839064.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs NP_839065.1 residues 1 to 235 of 235 are 95.74 pct identical to residues 1 to 235 of 235 from Escherichia coli K-12 : B3810 NP_839066.2 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_839067.1 residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from GenPept : >gb|AAG59001.1|AE005612_4 (AE005612) Z5325 gene product [Escherichia coli O157:H7 EDL933] NP_839068.1 residues 1 to 342 of 345 are 69.59 pct identical to residues 39 to 380 of 669 from GenPept : >emb|CAD09375.1| (AL627279) possible exported protein [Salmonella enterica subsp. enterica serovar Typhi] NP_839069.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839070.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839071.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly NP_839072.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP NP_839073.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis NP_839074.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis NP_839075.1 residues 1 to 367 of 399 are 88.01 pct identical to residues 1 to 367 of 393 from Escherichia coli K-12 : B3803 NP_839076.1 residues 19 to 398 of 398 are 92.63 pct identical to residues 19 to 398 of 398 from Escherichia coli K-12 : B3802; involved in late step of protohemeiX synthesis NP_839077.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_839078.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_839079.1 residues 1 to 411 of 411 are 96.10 pct identical to residues 1 to 411 of 411 from Escherichia coli K-12 : B3800 NP_839080.1 uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function NP_839081.1 residues 1 to 246 of 246 are 99.18 pct identical to residues 1 to 246 of 246 from Escherichia coli K-12 : B3794; required for synthesis of enterobacterial common antigen (ECA) NP_839082.1 enterobacterial common antigen polymerase NP_839083.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis NP_839084.1 residues 1 to 416 of 416 are 91.34 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B3792 NP_839085.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis NP_839086.1 residues 1 to 181 of 181 are 81.76 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B3790 NP_839087.1 residues 1 to 293 of 293 are 100.00 pct identical to residues 1 to 293 of 293 from Escherichia coli K-12 : B3789 NP_839088.1 residues 1 to 355 of 355 are 94.08 pct identical to residues 1 to 355 of 355 from Escherichia coli K-12 : B3788 NP_839089.1 catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid NP_839090.1 residues 1 to 390 of 390 are 96.15 pct identical to residues 1 to 389 of 389 from Escherichia coli K-12 : B3786; required for synthesis of enterobacterial common antigen (ECA) NP_839091.1 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein NP_839092.1 residues 1 to 367 of 367 are 88.82 pct identical to residues 1 to 367 of 367 from Escherichia coli K-12 : B3784; required for synthesis of enterobacterial common antigen (ECA) NP_839093.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes NP_839094.1 residues 1 to 33 of 33 are 100.00 pct identical to residues 1 to 33 of 33 from Escherichia coli K-12 : B3782 NP_839095.1 residues 1 to 127 of 127 are 100.00 pct identical to residues 1 to 127 of 127 from Escherichia coli K-12 : B3781 NP_839096.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation NP_839097.1 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation NP_839098.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication NP_839099.1 residues 1 to 93 of 93 are 98.92 pct identical to residues 1 to 93 of 93 from Escherichia coli K-12 : B3775 NP_839100.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis NP_839101.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate NP_839102.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway NP_839103.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis NP_839104.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids NP_839105.1 residues 1 to 86 of 86 are 100.00 pct identical to residues 2 to 87 of 87 from Escherichia coli K-12 : B3769; valine insensitive NP_839106.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit NP_839107.1 residues 1 to 32 of 32 are 56.25 pct identical to residues 1 to 32 of 32 from Escherichia coli K-12 : B3766 NP_839108.1 residues 1 to 112 of 112 are 100.00 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 : B3764 NP_839109.1 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon NP_839110.1 residues 1 to 182 of 182 are 98.90 pct identical to residues 1 to 181 of 181 from Escherichia coli K-12 : B3755 NP_839111.1 residues 1 to 467 of 467 are 92.07 pct identical to residues 9 to 475 of 475 from Escherichia coli K-12 : B3754 NP_839112.1 DNA-binding transcriptional repressor of ribose metabolism NP_839113.1 catalyzes the formation of D-ribose 5-phosphate from ribose NP_839114.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B NP_839115.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839116.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839117.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source NP_839118.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH NP_839119.1 residues 1 to 442 of 442 are 100.00 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_839120.2 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase NP_839121.2 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA NP_839122.1 catalyzes the formation of asparagine from aspartate and ammonia NP_839123.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase NP_839124.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group NP_839125.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs NP_839126.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA NP_839127.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation NP_839128.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 NP_839129.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 NP_839130.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. NP_839131.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex NP_839132.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit NP_839133.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit NP_839134.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit NP_839135.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane NP_839136.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis NP_839137.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source NP_839138.1 residues 1 to 442 of 442 are 99.32 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_839139.1 residues 1 to 190 of 190 are 92.10 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAL18161.1| (AY057066) LpfA [Escherichia coli] NP_839140.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_839141.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_839142.1 residues 1 to 168 of 168 are 99.40 pct identical to residues 747 to 914 of 1295 from GenPept : >gb|AAG30168.1|AF289092_1 (AF289092) secreted autotransporter toxin [Escherichia coli]; partial NP_839143.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_839144.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_839145.1 residues 1 to 97 of 97 are 87.62 pct identical to residues 24 to 120 of 120 from GenPept : >gb|AAG58857.1|AE005598_1 (AE005598) Z5148 gene product [Escherichia coli O157:H7 EDL933] NP_839146.2 experimental results in Escherichia coli suggest that this gene encodes an inosine export protein; member of major facilitator superfamily; MFS NP_839147.1 residues 1 to 159 of 159 are 98.74 pct identical to residues 1 to 159 of 159 from Escherichia coli K-12 : B3663 NP_839148.1 residues 1 to 450 of 470 are 96.44 pct identical to residues 1 to 450 of 470 from Escherichia coli K-12 : B3664 NP_839149.1 catalyzes the formation of hypoxanthine from adenine; in E. coli this activity has been detected in mutant strains but not in wild type NP_839150.1 cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate NP_839151.1 membrane protein regulates uhpT expression NP_839152.1 Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph NP_839153.1 response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter NP_839154.1 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit NP_839155.1 catalyzes the formation of 2-acetolactate from pyruvate NP_839156.1 residues 1 to 32 of 32 are 65.62 pct identical to residues 1 to 32 of 32 from Escherichia coli K-12 : B3672 NP_839157.1 multidrug efflux protein involved in adaptation to low energy shock NP_839158.1 residues 1 to 165 of 165 are 99.39 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B3674 NP_839159.1 residues 1 to 120 of 120 are 86.66 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B3675 NP_839160.1 residues 1 to 91 of 115 are 84.61 pct identical to residues 1 to 91 of 115 from Escherichia coli K-12 : B3676 NP_839161.1 residues 1 to 137 of 137 are 70.46 pct identical to residues 1 to 149 of 149 from Escherichia coli K-12 : B3677 NP_839162.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function NP_839163.1 residues 1 to 297 of 297 are 90.23 pct identical to residues 11 to 307 of 307 from Escherichia coli K-12 : B3680 NP_839164.1 residues 1 to 161 of 161 are 100.00 pct identical to residues 1 to 161 of 161 from Escherichia coli K-12 : B3682 NP_839165.1 residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 238 from Escherichia coli K-12 : B3684 NP_839166.1 residues 1 to 553 of 553 are 88.24 pct identical to residues 9 to 561 of 561 from Escherichia coli K-12 : B3685 NP_839167.1 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent NP_839168.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress NP_839169.2 residues 1 to 135 of 135 are 100.00 pct identical to residues 1 to 135 of 135 from Escherichia coli K-12 : B3688 NP_839170.1 residues 1 to 424 of 424 are 94.10 pct identical to residues 1 to 416 of 416 from Escherichia coli K-12 : B3689 NP_839171.1 FAD/NAD(P)-binding domain NP_839172.1 residues 1 to 445 of 445 are 97.07 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B3691 NP_839173.1 residues 1 to 292 of 292 are 97.94 pct identical to residues 1 to 292 of 292 from Escherichia coli K-12 : B3693 NP_839174.1 residues 17 to 229 of 229 are 25.76 pct identical to residues 22 to 235 of 257 from Escherichia coli K-12 : B4324 NP_839176.1 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins NP_839177.1 residues 1 to 132 of 132 are 98.48 pct identical to residues 4 to 135 of 135 from Escherichia coli K-12 : B3698 NP_839178.1 negatively supercoils closed circular double-stranded DNA NP_839179.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA NP_839180.1 binds the polymerase to DNA and acts as a sliding clamp NP_839181.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. NP_839182.1 in Escherichia coli transcription of this gene is enhanced by polyamines NP_839183.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates NP_839184.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria NP_839185.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE NP_839186.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839187.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839188.1 residues 1 to 24 of 24 are 95.83 pct identical to residues 1 to 24 of 24 from Escherichia coli K-12 : B3707 NP_839189.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan NP_839190.1 tryptophan transporter of low affinity NP_839191.1 Confers resistance to chloramphenicol NP_839192.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_839193.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAF09029.1| (AF139596) unknown [Shigella flexneri] NP_839194.1 residues 1 to 249 of 249 are 98.79 pct identical to residues 5 to 253 of 253 from Escherichia coli K-12 : B3712 NP_839195.1 residues 1 to 188 of 188 are 100.00 pct identical to residues 1 to 188 of 188 from Escherichia coli K-12 : B3713 NP_839196.1 residues 1 to 445 of 445 are 90.11 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B3714 NP_839197.1 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily NP_839198.1 might be involved in hypersensitivity to nitrofurzone NP_839199.1 residues 1 to 224 of 224 are 99.55 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839200.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706) IS orf [Shigella flexneri]; partial NP_839201.1 residues 1 to 533 of 533 are 96.99 pct identical to residues 1 to 533 of 533 from GenPept : >gb|AAL72376.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839202.1 residues 24 to 232 of 240 are 93.30 pct identical to residues 1 to 209 of 213 from Escherichia coli K-12 : B3718 NP_839203.1 residues 1 to 386 of 391 are 93.00 pct identical to residues 12 to 397 of 400 from Escherichia coli K-12 : B3719 NP_839204.1 residues 1 to 525 of 525 are 96.57 pct identical to residues 14 to 538 of 538 from Escherichia coli K-12 : B3720 NP_839205.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839206.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839207.1 residues 1 to 348 of 349 are 97.41 pct identical to residues 1 to 348 of 470 from Escherichia coli K-12 : B3721 NP_839208.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_839209.1 positive regulator of the beta-glucoside operon; transcriptional antiterminator NP_839210.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon NP_839211.1 residues 1 to 257 of 257 are 95.33 pct identical to residues 1 to 257 of 257 from Escherichia coli K-12 : B3725 NP_839212.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions NP_839213.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions NP_839214.1 residues 1 to 346 of 346 are 97.10 pct identical to residues 1 to 346 of 346 from Escherichia coli K-12 : B3728 NP_839215.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839216.1 residues 1 to 840 of 840 are 99.40 pct identical to residues 1 to 840 of 840 from GenPept : >gb|AAL18163.1| (AY057066) LpfC [Escherichia coli] NP_839217.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_839218.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_839219.1 residues 1 to 731 of 731 are 97.40 pct identical to residues 2 to 732 of 732 from GenPept : >gb|AAD44750.1|AF141323_21 (AF141323) IutA [Shigella flexneri] NP_839220.1 residues 1 to 445 of 445 are 100.00 pct identical to residues 1 to 445 of 445 from GenPept : >gb|AAD44749.1|AF141323_20 (AF141323) IucD [Shigella flexneri] NP_839221.1 residues 1 to 580 of 580 are 99.48 pct identical to residues 1 to 580 of 580 from GenPept : >gb|AAK71633.1|AF335540_5 (AF335540) IucC [Shigella boydii] NP_839222.1 residues 1 to 315 of 315 are 100.00 pct identical to residues 1 to 315 of 315 from GenPept : >gb|AAK71632.1|AF335540_4 (AF335540) IucB [Shigella boydii] NP_839223.1 residues 1 to 593 of 593 are 100.00 pct identical to residues 1 to 593 of 593 from GenPept : >gb|AAD44746.1|AF141323_17 (AF141323) IucA [Shigella flexneri] NP_839224.1 residues 1 to 397 of 397 are 93.19 pct identical to residues 1 to 397 of 397 from GenPept : >gb|AAD44744.1|AF141323_15 (AF141323) ShiF [Shigella flexneri] NP_839225.1 residues 1 to 323 of 323 are 99.68 pct identical to residues 1 to 323 of 323 from NRprotein_Feb03 : >ref|NP_709452.1| orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN45159.1|AE015379_1 orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] NP_839226.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839227.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839228.1 residues 1 to 132 of 132 are 100.00 pct identical to residues 1 to 132 of 132 from NRprotein_Feb03 : >ref|NP_709450.1| colicin V immunity protein shiD [imported] [Shigella flexneri 2a str. 301] pir||T44474 colicin V immunity protein shiD [imported] - Shigella flexneri gb|AAD44741.1|AF141323_12 ShiD [Shigella flexneri] gb|AAD54668.1|AF097520_7 novel colicin immunity protein [Shigella flexneri] gb|AA NP_839229.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_839230.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_839231.1 residues 1 to 108 of 108 are 74.07 pct identical to residues 1 to 108 of 108 from GenPept : >emb|CAA35935.1| (X51586) unknown peptide (AA 1-108) [Shigella sonnei] NP_839232.1 residues 1 to 215 of 215 are 99.53 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a] NP_839233.1 residues 1 to 172 of 172 are 100.00 pct identical to residues 1 to 172 of 172 from NRprotein_Feb03 : >pir||T44468 hypothetical protein shiC [imported] - Shigella flexneri gb|AAD44735.1|AF141323_6 ShiC [Shigella flexneri] gb|AAD54667.1|AF097520_5 unknown [Shigella flexneri] NP_839234.1 residues 1 to 99 of 99 are 74.74 pct identical to residues 4 to 102 of 102 from GenPept : >gb|AAK18485.1|AF348706_174 (AF348706) orf, hypothetical [Shigella flexneri] NP_839235.1 residues 1 to 130 of 130 are 100.00 pct identical to residues 1 to 130 of 130 from NRprotein_Feb03 : >ref|NP_709441.1| transposase tnpB [imported] [Shigella flexneri 2a str. 301] pir||T44467 transposase tnpB [imported] - Shigella flexneri gb|AAD44734.1|AF141323_5 TnpB [Shigella flexneri] gb|AAN45148.1|AE015378_3 transposase tnpB [imported] [Shigella flexneri 2a str. 301] NP_839236.1 residues 1 to 153 of 153 are 99.34 pct identical to residues 1 to 153 of 153 from NRprotein_Feb03 : >pir||T44465 hypothetical protein shiB [imported] - Shigella flexneri gb|AAD44732.1|AF141323_3 ShiB [Shigella flexneri] NP_839237.1 residues 1 to 347 of 347 are 100.00 pct identical to residues 1 to 347 of 347 from NRprotein_Feb03 : >ref|NP_709438.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] pir||T44464 hypothetical protein shiA [imported] - Shigella flexneri gb|AAD44731.1|AF141323_2 ShiA [Shigella flexneri] gb|AAN45145.1|AE015377_5 orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] NP_839238.1 residues 1 to 403 of 403 are 100.00 pct identical to residues 1 to 403 of 403 from NRprotein_Feb03 : >ref|NP_709437.1| Sai integrase [Shigella flexneri 2a str. 301] gb|AAD54663.1|AF097520_1 Sai integrase [Shigella flexneri] gb|AAN45144.1|AE015377_4 Sai integrase [Shigella flexneri 2a str. 301] NP_839239.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides NP_839240.1 residues 24 to 569 of 569 are 99.08 pct identical to residues 24 to 569 of 569 from Escherichia coli K-12 : B3655 NP_839241.1 residues 1 to 463 of 463 are 96.97 pct identical to residues 1 to 463 of 463 from Escherichia coli K-12 : B3654 NP_839242.1 residues 1 to 401 of 401 are 82.54 pct identical to residues 1 to 401 of 401 from Escherichia coli K-12 : B3653 NP_839243.1 catalyzes branch migration in Holliday junction intermediates NP_839244.1 specifically modifies tRNA at position G18 NP_839245.1 residues 1 to 702 of 702 are 98.14 pct identical to residues 1 to 702 of 702 from Escherichia coli K-12 : B3650 NP_839246.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits NP_839247.1 Essential for recycling GMP and indirectly, cGMP NP_839248.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+ NP_839249.1 residues 1 to 223 of 223 are 73.54 pct identical to residues 1 to 223 of 223 from Escherichia coli K-12 : B3646 NP_839250.1 residues 1 to 274 of 274 are 97.81 pct identical to residues 5 to 278 of 278 from Escherichia coli K-12 : B3645 NP_839251.1 residues 1 to 287 of 287 are 94.42 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B3644 NP_839252.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs NP_839253.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate NP_839254.2 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly NP_839255.1 catalyzes the formation of dUMP from dUTP NP_839256.2 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine NP_839257.2 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase NP_839258.1 required for 70S ribosome assembly NP_839259.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif NP_839260.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases NP_839261.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA NP_839262.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A NP_839263.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839264.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839265.1 residues 1 to 352 of 352 are 96.59 pct identical to residues 1 to 352 of 352 from GenPept : >gb|AAG58776.1|AE005590_11 (AE005590) LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933] NP_839266.1 residues 1 to 374 of 374 are 99.46 pct identical to residues 1 to 374 of 374 from GenPept : >gb|AAC69678.1| (AF019746) UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG [Escherichia coli] NP_839267.1 residues 1 to 268 of 268 are 93.65 pct identical to residues 1 to 268 of 268 from GenPept : >gb|AAG58774.1|AE005590_9 (AE005590) LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933] NP_839268.1 residues 1 to 335 of 335 are 99.70 pct identical to residues 1 to 335 of 335 from GenPept : >gb|AAG58773.1|AE005590_8 (AE005590) LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933] NP_839269.1 residues 1 to 235 of 235 are 93.19 pct identical to residues 1 to 235 of 235 from GenPept : >gb|AAC69664.1| (AF019745) WaaY [Escherichia coli] NP_839270.1 residues 1 to 337 of 337 are 94.06 pct identical to residues 1 to 337 of 337 from GenPept : >gb|AAG58771.1|AE005590_6 (AE005590) LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933] NP_839271.1 residues 1 to 380 of 380 are 96.31 pct identical to residues 1 to 380 of 380 from GenPept : >gb|AAG58770.1|AE005590_5 (AE005590) LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933] NP_839272.1 residues 1 to 402 of 402 are 93.28 pct identical to residues 1 to 402 of 402 from GenPept : >gb|AAG58769.1|AE005590_4 (AE005590) LPS biosynthesis enzyme [Escherichia coli O157:H7 EDL933] NP_839273.1 residues 1 to 307 of 320 are 94.13 pct identical to residues 11 to 317 of 319 from Escherichia coli K-12 : B3621; involved in lipopolysaccharide core biosynthesis NP_839274.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core NP_839275.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose NP_839276.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine NP_839277.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism NP_839278.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839279.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839280.1 residues 1 to 46 of 46 are 100.00 pct identical to residues 299 to 344 of 344 from Escherichia coli K-12 : B3615 NP_839281.1 residues 1 to 277 of 277 are 99.63 pct identical to residues 1 to 277 of 277 from Escherichia coli K-12 : B3614 NP_839282.2 residues 1 to 419 of 419 are 92.84 pct identical to residues 9 to 427 of 427 from Escherichia coli K-12 : B3613 NP_839283.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate NP_839284.1 residues 1 to 143 of 143 are 99.30 pct identical to residues 1 to 143 of 143 from Escherichia coli K-12 : B3611 NP_839285.1 residues 1 to 83 of 83 are 98.79 pct identical to residues 1 to 83 of 83 from Escherichia coli K-12 : B3610 NP_839286.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA NP_839287.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate NP_839288.1 catalyzes the O-acetylation of serine NP_839289.1 member of the SPOUT superfamily of RNA methyltransferases; no methyltransferase activity observed with certain tRNA substrates NP_839290.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration NP_839291.1 represses the lctPRD operon NP_839292.1 residues 1 to 551 of 551 are 84.93 pct identical to residues 1 to 551 of 551 from Escherichia coli K-12 : B3603 NP_839293.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839294.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839295.1 residues 1 to 120 of 120 are 85.83 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B3602 NP_839296.1 Acts as a repressor of the mtlAD operon NP_839297.1 residues 1 to 382 of 382 are 98.95 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B3600 NP_839298.1 residues 1 to 637 of 637 are 90.42 pct identical to residues 1 to 637 of 637 from Escherichia coli K-12 : B3599 NP_839299.1 residues 1 to 120 of 120 are 99.16 pct identical to residues 1 to 120 of 120 from Escherichia coli K-12 : B3598 NP_839300.1 residues 24 to 361 of 361 are 100.00 pct identical to residues 41 to 378 of 378 from Escherichia coli K-12 : B3597 NP_839301.1 residues 1 to 202 of 202 are 99.50 pct identical to residues 1 to 202 of 202 from Escherichia coli K-12 : B3592 NP_839302.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis NP_839303.1 residues 1 to 614 of 614 are 98.37 pct identical to residues 1 to 614 of 614 from Escherichia coli K-12 : B3590 NP_839304.1 residues 1 to 381 of 383 are 96.06 pct identical to residues 1 to 381 of 382 from Escherichia coli K-12 : B3589 NP_839305.1 residues 1 to 542 of 542 are 96.30 pct identical to residues 1 to 542 of 542 from Escherichia coli K-12 : B3588 NP_839306.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839307.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839308.1 residues 27 to 390 of 430 are 83.51 pct identical to residues 27 to 390 of 424 from Escherichia coli K-12 : B3578 NP_839309.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839310.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAA96691.1| (M37616) insA gene product [Insertion sequence IS1] NP_839311.1 NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate NP_839312.1 residues 1 to 282 of 282 are 99.64 pct identical to residues 1 to 282 of 282 from Escherichia coli K-12 : B3574 NP_839313.1 residues 1 to 157 of 157 are 97.45 pct identical to residues 1 to 157 of 157 from Escherichia coli K-12 : B3573 NP_839314.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis NP_839315.1 periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds NP_839316.1 residues 1 to 274 of 274 are 99.27 pct identical to residues 1 to 274 of 274 from Escherichia coli K-12 : B3570 NP_839317.1 residues 1 to 393 of 393 are 81.67 pct identical to residues 1 to 393 of 393 from Escherichia coli K-12 : B3568 NP_839318.1 with XylFH is part of the high affinity xylose ABC transporter NP_839319.1 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity NP_839320.1 residues 1 to 484 of 484 are 89.46 pct identical to residues 1 to 484 of 484 from Escherichia coli K-12 : B3564 NP_839321.1 residues 1 to 112 of 113 are 98.21 pct identical to residues 5 to 116 of 117 from Escherichia coli K-12 : B3563 NP_839322.1 residues 1 to 145 of 145 are 100.00 pct identical to residues 2 to 146 of 146 from Escherichia coli K-12 : B3562 NP_839323.1 residues 1 to 331 of 331 are 92.14 pct identical to residues 1 to 331 of 331 from Escherichia coli K-12 : B3561 NP_839324.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_839325.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_839326.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839327.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839329.1 residues 1 to 242 of 242 are 100.00 pct identical to residues 1 to 242 of 242 from Escherichia coli K-12 : B3515 NP_839330.1 regulates genes in response to acid and/or during stationary phase NP_839331.1 residues 1 to 466 of 466 are 99.78 pct identical to residues 1 to 466 of 466 from Escherichia coli K-12 : B3517 NP_839332.1 residues 1 to 465 of 465 are 99.56 pct identical to residues 1 to 465 of 465 from Escherichia coli K-12 : B3518 NP_839333.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839334.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839335.1 residues 1 to 283 of 283 are 99.64 pct identical to residues 1 to 283 of 283 from Escherichia coli K-12 : B3558 NP_839336.1 residues 1 to 70 of 70 are 100.00 pct identical to residues 1 to 70 of 70 from Escherichia coli K-12 : B3556 NP_839337.1 residues 1 to 41 of 41 are 100.00 pct identical to residues 1 to 41 of 96 from Escherichia coli K-12 : B3555 NP_839338.1 residues 1 to 276 of 276 are 94.56 pct identical to residues 1 to 276 of 276 from Escherichia coli K-12 : B3554 NP_839339.1 Involved in the metabolism of aromatic amino acids NP_839340.2 residues 1 to 208 of 208 are 88.94 pct identical to residues 12 to 219 of 219 from Escherichia coli K-12 : B3552 NP_839341.1 residues 21 to 759 of 759 are 98.78 pct identical to residues 1 to 739 of 739 from Escherichia coli K-12 : B3551 NP_839342.1 residues 1 to 146 of 146 are 97.94 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B3550 NP_839343.1 constitutive, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine NP_839344.1 residues 1 to 232 of 232 are 99.13 pct identical to residues 3 to 234 of 234 from Escherichia coli K-12 : B3548 NP_839345.1 residues 1 to 402 of 402 are 82.08 pct identical to residues 1 to 402 of 402 from Escherichia coli K-12 : B3547 NP_839346.2 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide NP_839347.1 residues 1 to 535 of 535 are 97.19 pct identical to residues 1 to 535 of 535 from Escherichia coli K-12 : B3544 NP_839348.1 transports peptides consisting of two or three amino acids NP_839349.1 residues 1 to 300 of 300 are 89.99 pct identical to residues 1 to 300 of 300 from Escherichia coli K-12 : B3542 NP_839350.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF NP_839351.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides NP_839352.1 residues 1 to 404 of 423 are 96.03 pct identical to residues 1 to 404 of 423 from Escherichia coli K-12 : B3539 NP_839353.1 residues 1 to 559 of 559 are 93.73 pct identical to residues 1 to 559 of 559 from Escherichia coli K-12 : B3538 NP_839354.1 residues 2 to 63 of 63 are 85.48 pct identical to residues 1 to 62 of 62 from Escherichia coli K-12 : B3537 NP_839355.1 residues 1 to 523 of 523 are 99.80 pct identical to residues 1 to 523 of 523 from Escherichia coli K-12 : B3536 NP_839356.1 residues 1 to 62 of 62 are 100.00 pct identical to residues 1 to 62 of 62 from Escherichia coli K-12 : B3535 NP_839357.1 residues 24 to 250 of 250 are 99.55 pct identical to residues 16 to 242 of 242 from Escherichia coli K-12 : B3534 NP_839358.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) NP_839359.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans NP_839360.2 HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; similar to a phosphodiesterase from E. coli NP_839361.1 involved in the transport of C4-dicarboxylates across the membrane NP_839362.1 residues 1 to 498 of 498 are 94.57 pct identical to residues 1 to 498 of 498 from Escherichia coli K-12 : B3527 NP_839363.1 residues 1 to 382 of 382 are 96.07 pct identical to residues 1 to 382 of 382 from Escherichia coli K-12 : B3526 NP_839364.1 in Escherichia coli this protein is involved in flagellar function NP_839365.1 residues 1 to 686 of 686 are 88.48 pct identical to residues 6 to 691 of 691 from Escherichia coli K-12 : B3524 NP_839366.1 residues 1 to 440 of 440 are 86.59 pct identical to residues 1 to 440 of 440 from Escherichia coli K-12 : B3523 NP_839367.1 residues 1 to 337 of 337 are 99.10 pct identical to residues 1 to 337 of 337 from Escherichia coli K-12 : B3522 NP_839368.1 residues 1 to 323 of 323 are 98.14 pct identical to residues 1 to 323 of 323 from Escherichia coli K-12 : B3521 NP_839369.1 residues 1 to 200 of 200 are 99.00 pct identical to residues 1 to 200 of 200 from Escherichia coli K-12 : B3520 NP_839370.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_839371.1 cytoplasmic; catalyzes the hydrolysis of trehalose to glucose NP_839372.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839373.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839374.1 residues 1 to 175 of 175 are 100.00 pct identical to residues 1 to 175 of 175 from Escherichia coli K-12 : B3512 NP_839375.1 residues 1 to 190 of 190 are 85.78 pct identical to residues 1 to 190 of 190 from Escherichia coli K-12 : B3511 NP_839376.1 inactive form NP_839377.1 residues 1 to 112 of 112 are 100.00 pct identical to residues 1 to 112 of 112 from Escherichia coli K-12 : B3509 NP_839378.1 residues 1 to 176 of 176 are 98.86 pct identical to residues 1 to 176 of 176 from Escherichia coli K-12 : B3507 NP_839379.1 residues 1 to 199 of 199 are 91.95 pct identical to residues 1 to 199 of 199 from Escherichia coli K-12 : B3506 NP_839380.1 residues 51 to 317 of 318 are 35.18 pct identical to residues 20 to 274 of 274 from GenPept : >emb|CAB73548.1| (AL139079) membrane protein [Campylobacter jejuni] NP_839381.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839382.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839383.1 regulates the expression of of the arsRBC involved in resistance to arsenic NP_839384.1 residues 1 to 429 of 429 are 89.51 pct identical to residues 8 to 436 of 436 from Escherichia coli K-12 : B3502 NP_839385.1 residues 1 to 141 of 141 are 100.00 pct identical to residues 1 to 141 of 141 from Escherichia coli K-12 : B3503 NP_839386.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839387.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839388.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense NP_839389.1 residues 1 to 280 of 280 are 98.57 pct identical to residues 1 to 280 of 280 from Escherichia coli K-12 : B3499 NP_839390.1 residues 1 to 680 of 680 are 96.02 pct identical to residues 1 to 680 of 680 from Escherichia coli K-12 : B3498 NP_839391.1 predicted SAM-dependent methyltransferase NP_839392.1 residues 1 to 144 of 144 are 100.00 pct identical to residues 1 to 144 of 144 from Escherichia coli K-12 : B3495; broad regulatory function NP_839393.1 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress NP_839394.1 residues 26 to 499 of 499 are 96.41 pct identical to residues 26 to 499 of 499 from Escherichia coli K-12 : B3493 NP_839395.1 residues 1 to 394 of 399 are 94.41 pct identical to residues 1 to 394 of 400 from Escherichia coli K-12 : B3492 NP_839396.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839397.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839398.1 residues 1 to 98 of 99 are 100.00 pct identical to residues 1 to 98 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839399.1 residues 1 to 334 of 341 are 22.65 pct identical to residues 229 to 570 of 597 from GenPept : >gb|AAF93566.1| (AE004127) hypothetical protein [Vibrio cholerae] NP_839400.1 residues 1 to 177 of 186 are 47.54 pct identical to residues 59 to 239 of 241 from GenPept : >gb|AAD26595.1| (AF012835) chaperone protein AafD [Escherichia coli] NP_839401.1 residues 20 to 356 of 359 are 41.78 pct identical to residues 29 to 375 of 856 from NRprotein_Feb2003 : >gb|AAD27810.1|AF114828_2 aggregative adherence fimbria II usher protein AafC [Escherichia coli]; similar to several fimbrial proteins NP_839402.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_839403.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_839404.1 no significant similarities NP_839405.1 residues 1 to 253 of 253 are 100.00 pct identical to residues 1 to 253 of 253 from NRprotein_Feb03 : >ref|NP_709260.1| orf, hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44967.1|AE015359_3 orf, hypothetical protein [Shigella flexneri 2a str. 301]; similar to response regulators NP_839406.1 residues 1 to 254 of 254 are 100.00 pct identical to residues 1 to 254 of 254 from NRprotein_Feb03 : >ref|NP_709259.1| orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44966.1|AE015359_2 orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] NP_839407.1 residues 1 to 171 of 171 are 100.00 pct identical to residues 1 to 171 of 171 from NRprotein_Feb03 : >ref|NP_709258.1| orf, hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN44965.1|AE015359_1 orf, hypothetical protein [Shigella flexneri 2a str. 301] NP_839408.1 residues 1 to 540 of 540 are 97.22 pct identical to residues 1 to 540 of 540 from Escherichia coli K-12 : B3488 NP_839409.1 residues 1 to 355 of 355 are 80.00 pct identical to residues 1 to 355 of 355 from Escherichia coli K-12 : B3487 NP_839410.1 residues 18 to 911 of 911 are 94.63 pct identical to residues 1 to 894 of 894 from Escherichia coli K-12 : B3486 NP_839411.1 residues 1 to 374 of 374 are 88.77 pct identical to residues 2 to 375 of 375 from Escherichia coli K-12 : B3485 NP_839412.1 residues 1 to 119 of 119 are 99.15 pct identical to residues 1 to 119 of 119 from GenPept : >gb|AAG58616.1|AE005572_14 (AE005572) Z4882 gene product [Escherichia coli O157:H7 EDL933] NP_839413.1 Inhibits transcription at high concentrations of nickel NP_839414.1 with NikABCD is involved with nickel transport into the cell NP_839415.1 with NikABCE is involved in nickel transport into the cell NP_839416.1 with NikABDE is involved in nickel transport into the cell NP_839417.1 with NikACDE is involved in nickel transport into the cell NP_839418.1 residues 1 to 524 of 524 are 99.42 pct identical to residues 1 to 524 of 524 from Escherichia coli K-12 : B3476 NP_839419.1 residues 1 to 195 of 195 are 98.46 pct identical to residues 1 to 195 of 195 from Escherichia coli K-12 : B3475 NP_839420.1 residues 1 to 349 of 349 are 95.98 pct identical to residues 28 to 376 of 376 from Escherichia coli K-12 : B3474 NP_839421.2 residues 30 to 387 of 419 are 37.70 pct identical to residues 14 to 371 of 392 from Escherichia coli K-12 : B2322 NP_839422.2 residues 1 to 203 of 203 are 100.00 pct identical to residues 1 to 203 of 203 from Escherichia coli K-12 : B3472 NP_839423.1 residues 1 to 221 of 221 are 99.54 pct identical to residues 1 to 221 of 221 from Escherichia coli K-12 : B3471 NP_839424.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs NP_839425.1 P-type ATPase involved in the export of lead, cadmium, zinc and mercury NP_839426.1 residues 1 to 208 of 208 are 88.46 pct identical to residues 1 to 208 of 208 from Escherichia coli K-12 : B3468 NP_839427.1 residues 1 to 119 of 119 are 89.07 pct identical to residues 1 to 119 of 119 from Escherichia coli K-12 : B3467 NP_839428.1 residues 1 to 89 of 89 are 98.87 pct identical to residues 1 to 89 of 89 from Escherichia coli K-12 : B3466 NP_839429.1 catalyzes the methylation of 16S rRNA at position G966 NP_839430.1 signal recognition protein receptor; functions in the targeting and insertion of membrane proteins NP_839431.1 ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions NP_839432.1 ABC transporter membrane protein NP_839433.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters NP_839434.1 residues 1 to 386 of 386 are 97.15 pct identical to residues 1 to 386 of 386 from Escherichia coli K-12 : B3460 NP_839435.1 residues 1 to 126 of 127 are 89.68 pct identical to residues 1 to 126 of 127 from Escherichia coli K-12 : B3459 NP_839436.1 residues 1 to 369 of 369 are 99.72 pct identical to residues 1 to 369 of 369 from Escherichia coli K-12 : B3458 NP_839437.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter NP_839438.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine NP_839439.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine NP_839440.1 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine NP_839441.1 with UgpACE is involved in the uptake of glycerol-3-phosphate NP_839442.1 with UgpEC is involved in the uptake of glycerol-3-phosphate NP_839443.1 with UgpABC is involved in uptake of glycerol-3-phosphate NP_839444.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate NP_839445.1 residues 1 to 146 of 146 are 71.23 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B3448 NP_839446.1 periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides NP_839447.1 YhhY; regulated by the fur regulator; unknown function NP_839448.1 residues 1 to 344 of 345 are 99.70 pct identical to residues 1 to 344 of 345 from Escherichia coli K-12 : B3440 NP_839449.1 residues 1 to 231 of 231 are 99.56 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B3439 NP_839450.1 residues 1 to 285 of 312 are 97.54 pct identical to residues 20 to 304 of 313 from Escherichia coli K-12 : B3438 NP_839451.2 thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate NP_839452.1 residues 1 to 425 of 425 are 99.52 pct identical to residues 22 to 446 of 446 from NRprotein_Feb2003 : >ref|NP_289984.1| low-affinity gluconate permease [Escherichia coli O157:H7 EDL933] ref|NP_417893.1| H+/gluconate symporter [Escherichia coli K12] sp|P46858|GNTU_ECOLI Low-affinity gluconate transporter (Gluconate permease)[Escherichia coli] NP_839453.1 YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP) NP_839454.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde NP_839455.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain NP_839456.1 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen NP_839457.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate NP_839458.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose NP_839459.1 residues 1 to 815 of 815 are 97.30 pct identical to residues 1 to 815 of 815 from Escherichia coli K-12 : B3428 NP_839460.1 residues 1 to 284 of 288 are 98.94 pct identical to residues 7 to 290 of 439 from GenPept : >gb|AAK18553.1|AF348706_242 (AF348706) IS4 orf [Shigella flexneri] NP_839461.1 residues 1 to 151 of 151 are 99.33 pct identical to residues 298 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_839462.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane NP_839463.1 belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine NP_839464.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity NP_839465.1 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism NP_839466.1 residues 1 to 532 of 532 are 98.68 pct identical to residues 1 to 532 of 532 from Escherichia coli K-12 : B3422 NP_839467.1 residues 1 to 408 of 408 are 98.28 pct identical to residues 1 to 408 of 408 from Escherichia coli K-12 : B3421 NP_839468.1 catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester NP_839469.1 residues 1 to 797 of 797 are 94.47 pct identical to residues 1 to 797 of 797 from Escherichia coli K-12 : B3417 NP_839470.1 amylomaltase; acts to release glucose from maltodextrins NP_839471.1 residues 17 to 438 of 438 are 88.38 pct identical to residues 17 to 437 of 437 from Escherichia coli K-12 : B3415 NP_839472.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source NP_839473.2 involved in high-affinity gluconate transport NP_839474.1 Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis NP_839475.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_839476.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_839477.1 residues 1 to 281 of 295 are 99.28 pct identical to residues 1 to 281 of 292 from Escherichia coli K-12 : B3411 NP_839478.1 residues 1 to 78 of 78 are 98.71 pct identical to residues 1 to 78 of 78 from Escherichia coli K-12 : B3410 NP_839479.1 cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake NP_839480.1 residues 1 to 75 of 75 are 98.66 pct identical to residues 1 to 75 of 75 from Escherichia coli K-12 : B3408 NP_839481.1 residues 1 to 740 of 740 are 97.56 pct identical to residues 1 to 740 of 740 from Escherichia coli K-12 : B3407 NP_839482.2 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus NP_839483.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation NP_839484.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR NP_839485.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP NP_839486.1 residues 1 to 583 of 583 are 79.24 pct identical to residues 1 to 574 of 574 from Escherichia coli K-12 : B3402 NP_839487.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers NP_839488.1 residues 1 to 133 of 133 are 87.96 pct identical to residues 1 to 133 of 133 from Escherichia coli K-12 : B3400 NP_839489.1 residues 1 to 237 of 237 are 100.00 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B3399 NP_839490.1 residues 1 to 711 of 711 are 93.81 pct identical to residues 1 to 711 of 711 from Escherichia coli K-12 : B3398 NP_839491.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose NP_839492.3 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits NP_839493.1 residues 1 to 268 of 268 are 93.28 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B3395 NP_839494.1 residues 1 to 179 of 179 are 80.44 pct identical to residues 1 to 179 of 179 from Escherichia coli K-12 : B3394 NP_839495.1 residues 1 to 146 of 146 are 97.94 pct identical to residues 1 to 146 of 146 from Escherichia coli K-12 : B3393 NP_839496.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa NP_839497.2 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis NP_839498.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis NP_839499.1 residues 1 to 430 of 430 are 61.39 pct identical to residues 1 to 428 of 428 from Escherichia coli K-12 : B3388; interferes with cell division NP_839500.1 residues 1 to 278 of 278 are 99.64 pct identical to residues 1 to 278 of 278 from Escherichia coli K-12 : B3387 NP_839501.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate NP_839502.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate NP_839503.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_839504.1 residues 1 to 228 of 228 are 96.49 pct identical to residues 1 to 228 of 228 from Escherichia coli K-12 : B3383 NP_839505.1 residues 1 to 134 of 134 are 96.26 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B3382 NP_839506.1 residues 1 to 387 of 387 are 91.47 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B3381 NP_839507.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose NP_839508.1 phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE) NP_839509.1 residues 1 to 130 of 130 are 100.00 pct identical to residues 1 to 130 of 130 from Escherichia coli K-12 : B3378 NP_839510.1 residues 1 to 434 of 434 are 93.08 pct identical to residues 1 to 434 of 434 from Escherichia coli K-12 : B3377 NP_839511.1 residues 1 to 361 of 361 are 86.70 pct identical to residues 1 to 361 of 361 from Escherichia coli K-12 : B3376 NP_839512.1 may act as a transcriptional regulator of a fructoselysine-induced operon containing the yhfM, yhfN, yhfO, yhfP, yhfQ, and yhfR genes NP_839513.1 residues 1 to 261 of 261 are 99.23 pct identical to residues 1 to 261 of 261 from Escherichia coli K-12 : B3374 NP_839514.1 YhfOP; YhfP; YhfO; FrlC; catalyzes the interconversion of fructoselysine and psicoselysine NP_839515.2 catalyzes the conversion of fructoselysine 6-phosphate to glucose 6-phosphate and lysine NP_839516.1 residues 1 to 55 of 55 are 70.90 pct identical to residues 1 to 55 of 55 from Escherichia coli K-12 : B3369 NP_839517.1 multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin NP_839518.1 residues 1 to 184 of 184 are 100.00 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B3367 NP_839519.1 involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations NP_839520.1 residues 1 to 847 of 847 are 97.87 pct identical to residues 1 to 847 of 847 from Escherichia coli K-12 : B3365 NP_839521.1 residues 1 to 393 of 393 are 98.72 pct identical to residues 1 to 393 of 393 from Escherichia coli K-12 : B3364 NP_839522.1 residues 29 to 193 of 193 are 100.00 pct identical to residues 26 to 190 of 190 from Escherichia coli K-12 : B3363 NP_839523.1 residues 1 to 36 of 55 are 100.00 pct identical to residues 1 to 36 of 55 from Escherichia coli K-12 : B3362 NP_839524.1 residues 1 to 200 of 200 are 92.50 pct identical to residues 1 to 200 of 200 from Escherichia coli K-12 : B3361; recognized by rpoS, affects cell division NP_839525.1 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity NP_839526.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate NP_839527.1 residues 1 to 696 of 696 are 94.68 pct identical to residues 1 to 696 of 696 from Escherichia coli K-12 : B3358 NP_839528.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons NP_839529.1 residues 1 to 134 of 134 are 100.00 pct identical to residues 1 to 134 of 134 from Escherichia coli K-12 : B3356 NP_839530.1 residues 1 to 289 of 289 are 95.84 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B3355 NP_839531.1 residues 1 to 72 of 72 are 100.00 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B3354 NP_839532.1 residues 1 to 340 of 340 are 93.23 pct identical to residues 1 to 340 of 340 from Escherichia coli K-12 : B3353 NP_839533.1 residues 1 to 620 of 637 are 99.67 pct identical to residues 1 to 620 of 637 from Escherichia coli K-12 : B3352 NP_839534.1 required for KefB activity NP_839535.1 involved in potassium efflux NP_839536.1 rotamase NP_839537.1 residues 1 to 72 of 72 are 77.77 pct identical to residues 1 to 72 of 72 from Escherichia coli K-12 : B3348 NP_839538.1 rotamase NP_839539.1 residues 1 to 240 of 240 are 100.00 pct identical to residues 5 to 244 of 244 from Escherichia coli K-12 : B3346 NP_839540.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs NP_839541.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs NP_839542.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs NP_839543.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance NP_839544.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit NP_839545.1 Promotes the GTP-dependent translocation of the nascent protein chain from the A-site to the P-site of the ribosome NP_839546.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_839547.1 residues 1 to 64 of 64 are 87.50 pct identical to residues 1 to 64 of 64 from Escherichia coli K-12 : B3337 NP_839548.1 iron storage protein NP_839549.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex NP_839550.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin NP_839551.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA NP_839552.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel NP_839553.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation NP_839554.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA NP_839555.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center NP_839556.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation NP_839557.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e NP_839558.1 one of the stabilizing components for the large ribosomal subunit NP_839559.1 primary binding protein; helps mediate assembly; involved in translation fidelity NP_839560.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase NP_839561.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel NP_839562.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 NP_839563.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif NP_839564.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit NP_839565.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance NP_839566.1 binds 5S rRNA along with protein L5 and L25 NP_839567.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance NP_839568.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 NP_839569.1 late assembly protein NP_839570.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase NP_839571.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif NP_839572.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA NP_839573.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 NP_839574.2 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination NP_839575.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme NP_839576.1 is a component of the macrolide binding site in the peptidyl transferase center NP_839577.1 residues 1 to 224 of 224 are 100.00 pct identical to residues 1 to 224 of 224 from GenPept : >gb|AAL72464.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839578.1 residues 1 to 116 of 116 are 100.00 pct identical to residues 1 to 116 of 116 from GenPept : >gb|AAK18528.1|AF348706_217 (AF348706) IS orf [Shigella flexneri] NP_839579.1 residues 1 to 190 of 190 are 93.15 pct identical to residues 1 to 190 of 190 from GenPept : >gb|AAK18527.1|AF348706_216 (AF348706) IS orf [Shigella flexneri] NP_839580.1 residues 1 to 320 of 320 are 99.68 pct identical to residues 214 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839581.2 IS2 OrfA; forms an overlapping reading frame with orfB; may form a fusion protein OrfAB due to ribosomal frameshifting; both OrfA and OrfAB bind terminal inverted repeats NP_839582.2 IS2 OrfB; forms an overlapping reading frame with orfA; may form a fusion protein OrfAB due to ribosomal frameshifting; in some cases OrfB is itself expressed; both OrfA and OrfAB bind terminal inverted repeats NP_839583.2 in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown NP_839584.1 residues 1 to 231 of 231 are 99.13 pct identical to residues 1 to 231 of 231 from Escherichia coli K-12 : B4330 NP_839585.1 residues 1 to 153 of 153 are 99.34 pct identical to residues 1 to 153 of 153 from Escherichia coli K-12 : B4329 NP_839586.1 residues 1 to 390 of 390 are 99.23 pct identical to residues 1 to 390 of 390 from Escherichia coli K-12 : B4328 NP_839587.1 residues 1 to 303 of 303 are 94.71 pct identical to residues 1 to 303 of 303 from Escherichia coli K-12 : B4327 NP_839588.1 residues 1 to 133 of 133 are 99.24 pct identical to residues 1 to 133 of 133 from Escherichia coli K-12 : B4326 NP_839589.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAL72450.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839590.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839591.1 regulates the expression of uxuBA NP_839592.1 residues 1 to 486 of 486 are 98.76 pct identical to residues 1 to 486 of 486 from Escherichia coli K-12 : B4323 NP_839593.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate NP_839594.1 residues 1 to 447 of 447 are 91.49 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B4321 NP_839595.1 residues 1 to 300 of 300 are 99.66 pct identical to residues 1 to 300 of 300 from Escherichia coli K-12 : B4320 NP_839596.1 residues 1 to 167 of 167 are 99.40 pct identical to residues 1 to 167 of 167 from Escherichia coli K-12 : B4319 NP_839597.1 residues 1 to 176 of 176 are 97.72 pct identical to residues 1 to 176 of 176 from Escherichia coli K-12 : B4318 NP_839598.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839599.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839600.1 residues 1 to 241 of 241 are 99.17 pct identical to residues 1 to 241 of 241 from Escherichia coli K-12 : B4316; required for type 1 fimbriae NP_839601.1 residues 1 to 212 of 212 are 98.11 pct identical to residues 4 to 215 of 215 from Escherichia coli K-12 : B4315 NP_839602.1 residues 1 to 182 of 182 are 84.06 pct identical to residues 1 to 182 of 182 from Escherichia coli K-12 : B4314 NP_839603.1 inversion of on/off regulator of fimA NP_839604.1 residues 1 to 160 of 199 are 97.50 pct identical to residues 1 to 160 of 200 from Escherichia coli K-12 : B4312; involved in phase variation NP_839605.1 residues 1 to 182 of 182 are 100.00 pct identical to residues 60 to 241 of 241 from Escherichia coli K-12 : B4311 NP_839606.1 residues 1 to 404 of 404 are 98.76 pct identical to residues 1 to 404 of 404 from Escherichia coli K-12 : B4310 NP_839607.1 residues 1 to 252 of 252 are 99.60 pct identical to residues 75 to 326 of 326 from Escherichia coli K-12 : B4309 NP_839608.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839609.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839610.1 residues 1 to 231 of 231 are 81.46 pct identical to residues 30 to 261 of 261 from GenPept : >gb|AAL22652.1| (AE008876) regulatory protein, deoR family [Salmonella typhimurium LT2] NP_839611.1 residues 4 to 38 of 38 are 88.57 pct identical to residues 29 to 63 of 96 from GenPept : >emb|CAC50649.1| (AX188968) unnamed protein product [Escherichia coli] NP_839612.1 residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445) transposase A [Pantoea agglomerans] NP_839613.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839614.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839615.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839616.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839617.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 13 to 112 of 112 from GenPept : >gb|AAL72382.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839618.1 residues 1 to 208 of 208 are 100.00 pct identical to residues 72 to 279 of 279 from GenPept : >gb|AAL72449.1| (AF386526) InsB [Shigella flexneri 2a] NP_839619.1 residues 1 to 403 of 403 are 91.58 pct identical to residues 1 to 404 of 431 from NRprotein_Feb03 : >ref|NP_668085.1| prophage P4 integrase [Yersinia pestis KIM] gb|AAM84336.1|AE013677_1 prophage P4 integrase [Yersinia pestis KIM] NP_839620.1 residues 1 to 353 of 353 are 94.05 pct identical to residues 1 to 353 of 353 from Escherichia coli K-12 : B4269 NP_839621.1 residues 1 to 500 of 504 are 94.59 pct identical to residues 1 to 500 of 500 from Escherichia coli K-12 : B4263 NP_839622.1 residues 1 to 360 of 360 are 91.66 pct identical to residues 2 to 361 of 361 from Escherichia coli K-12 : B4262 NP_839623.1 residues 1 to 366 of 366 are 86.88 pct identical to residues 1 to 366 of 366 from Escherichia coli K-12 : B4261 NP_839624.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides NP_839625.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB NP_839626.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain NP_839627.1 residues 1 to 389 of 389 are 87.91 pct identical to residues 5 to 393 of 393 from Escherichia coli K-12 : B4257 NP_839628.1 residues 1 to 119 of 138 are 84.03 pct identical to residues 1 to 119 of 138 from Escherichia coli K-12 : B4255 NP_839629.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III. NP_839630.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839631.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839632.1 residues 1 to 150 of 150 are 100.00 pct identical to residues 4 to 153 of 153 from Escherichia coli K-12 : B4252 NP_839633.1 residues 1 to 84 of 84 are 94.04 pct identical to residues 1 to 84 of 84 from Escherichia coli K-12 : B4251 NP_839634.1 residues 3 to 51 of 51 are 93.87 pct identical to residues 6 to 54 of 54 from Escherichia coli K-12 : B4250 NP_839635.1 residues 1 to 237 of 237 are 93.24 pct identical to residues 1 to 237 of 237 from Escherichia coli K-12 : B4249 NP_839636.1 residues 1 to 130 of 131 are 98.46 pct identical to residues 1 to 130 of 131 from Escherichia coli K-12 : B4248 NP_839637.1 residues 1 to 110 of 110 are 87.27 pct identical to residues 1 to 110 of 110 from Escherichia coli K-12 : B4247 NP_839638.1 residues 1 to 44 of 44 are 97.72 pct identical to residues 1 to 44 of 44 from Escherichia coli K-12 : B4246 NP_839639.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis NP_839640.1 involved in the allosteric regulation of aspartate carbamoyltransferase NP_839641.1 residues 1 to 141 of 141 are 100.00 pct identical to residues 1 to 141 of 141 from Escherichia coli K-12 : B4243 NP_839642.1 P-type ATPase involved in magnesium influx NP_839643.1 regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon NP_839644.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel NP_839645.1 residues 1 to 551 of 551 are 99.45 pct identical to residues 1 to 551 of 551 from Escherichia coli K-12 : B4239 NP_839646.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates NP_839647.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions NP_839648.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD NP_839649.1 residues 1 to 183 of 183 are 93.44 pct identical to residues 1 to 183 of 183 from Escherichia coli K-12 : B4234 NP_839650.1 residues 1 to 457 of 457 are 99.78 pct identical to residues 1 to 457 of 457 from Escherichia coli K-12 : B4233 NP_839651.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate NP_839652.1 residues 1 to 442 of 442 are 99.77 pct identical to residues 7 to 448 of 448 from GenPept : >gb|AAK18333.1|AF348706_22 (AF348706) IS4 orf [Shigella flexneri] NP_839653.1 residues 1 to 341 of 341 are 71.84 pct identical to residues 1 to 341 of 341 from Escherichia coli K-12 : B4230 NP_839654.1 residues 1 to 381 of 500 are 95.80 pct identical to residues 1 to 381 of 417 from Escherichia coli K-12 : B4228 NP_839655.1 catalyzes the hydrolysis of pyrophosphate to phosphate NP_839656.1 residues 1 to 87 of 87 are 96.55 pct identical to residues 3 to 89 of 89 from Escherichia coli K-12 : B4223 NP_839657.1 residues 1 to 113 of 113 are 100.00 pct identical to residues 1 to 113 of 113 from Escherichia coli K-12 : B4222 NP_839658.1 residues 1 to 1259 of 1259 are 94.91 pct identical to residues 1 to 1259 of 1259 from Escherichia coli K-12 : B4221 NP_839659.1 residues 1 to 577 of 577 are 96.88 pct identical to residues 1 to 577 of 577 from Escherichia coli K-12 : B4220 NP_839660.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress NP_839661.1 residues 1 to 447 of 447 are 97.09 pct identical to residues 1 to 447 of 447 from Escherichia coli K-12 : B4218 NP_839662.1 residues 1 to 81 of 81 are 98.37 pct identical to residues 1 to 81 of 81 from Escherichia coli K-12 : B4217 NP_839663.1 residues 1 to 184 of 184 are 98.36 pct identical to residues 1 to 184 of 184 from Escherichia coli K-12 : B4216 NP_839664.1 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate NP_839665.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate NP_839666.1 residues 1 to 156 of 156 are 100.00 pct identical to residues 1 to 156 of 156 from Escherichia coli K-12 : B4212 NP_839667.1 residues 1 to 286 of 286 are 93.70 pct identical to residues 1 to 286 of 286 from Escherichia coli K-12 : B4211 NP_839668.1 residues 1 to 321 of 321 are 95.01 pct identical to residues 4 to 324 of 324 from Escherichia coli K-12 : B4210 NP_839669.1 Involved in anaerobic NO protection and iron metabolism NP_839670.1 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine NP_839671.1 residues 1 to 193 of 193 are 68.75 pct identical to residues 1 to 224 of 224 from Escherichia coli K-12 : B4206 NP_839672.1 residues 1 to 108 of 108 are 98.14 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B4205 NP_839673.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_839674.1 residues 1 to 294 of 294 are 99.65 pct identical to residues 1 to 294 of 294 from GenPept : >gb|AAL50626.1|AF417476_3 (AF417476) unknown [Shigella flexneri] NP_839675.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839676.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839677.1 residues 1 to 272 of 272 are 91.54 pct identical to residues 1 to 272 of 272 from GenPept : >gb|AAL72453.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839678.1 residues 1 to 350 of 350 are 94.85 pct identical to residues 1 to 350 of 444 from Escherichia coli K-12 : B4132 NP_839679.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839680.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839681.1 residues 1 to 191 of 191 are 99.47 pct identical to residues 9 to 199 of 199 from Escherichia coli K-12 : B4135 NP_839682.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm NP_839683.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals NP_839684.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB NP_839685.1 catalyzes the formation of fumarate from aspartate NP_839686.2 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein NP_839687.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function NP_839688.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_839689.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth NP_839690.1 residues 1 to 128 of 128 are 100.00 pct identical to residues 1 to 128 of 128 from Escherichia coli K-12 : B4144 NP_839691.1 residues 1 to 289 of 289 are 99.65 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B4145 NP_839692.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839693.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839694.1 residues 1 to 342 of 342 are 98.24 pct identical to residues 1 to 342 of 342 from Escherichia coli K-12 : B4146 NP_839695.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA NP_839696.1 residues 1 to 155 of 155 are 87.09 pct identical to residues 1 to 155 of 155 from Escherichia coli K-12 : B4148; may be a chaperone NP_839697.1 lipocalin; globomycin-sensitive outer membrane lipoprotein NP_839698.1 residues 1 to 377 of 377 are 98.14 pct identical to residues 1 to 377 of 377 from Escherichia coli K-12 : B4150; involved in penicillin resistance NP_839699.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane NP_839700.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB NP_839701.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB NP_839702.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB NP_839703.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_839704.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839705.1 residues 1 to 1103 of 1103 are 95.39 pct identical to residues 1 to 1107 of 1107 from Escherichia coli K-12 : B4159 NP_839706.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine NP_839707.2 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity NP_839708.2 3'-5' exoribonuclease specific for small oligoribonuclotides NP_839709.1 residues 1 to 379 of 379 are 99.47 pct identical to residues 1 to 379 of 379 from Escherichia coli K-12 : B4166 NP_839710.1 residues 1 to 515 of 515 are 92.42 pct identical to residues 1 to 515 of 515 from Escherichia coli K-12 : B4167 NP_839711.1 possibly involved in cell wall synthesis NP_839712.1 residues 1 to 445 of 445 are 93.48 pct identical to residues 1 to 445 of 445 from Escherichia coli K-12 : B4169 NP_839713.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex NP_839714.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity NP_839715.1 Stimulates the elongation of poly(A) tails NP_839716.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein NP_839717.1 with HflC inhibits proteolysis of lambda cII protein by FtsH NP_839718.1 with HflK inhibits proteolysis of lambda cII protein by FtsH NP_839719.1 residues 1 to 65 of 65 are 63.07 pct identical to residues 1 to 65 of 65 from Escherichia coli K-12 : B4176 NP_839720.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis NP_839721.1 negatively regulates the transcription of genes upregulated by nitrosative stress NP_839722.2 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs NP_839723.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA NP_839724.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839725.1 residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839726.1 residues 1 to 212 of 212 are 74.05 pct identical to residues 1 to 212 of 212 from Escherichia coli K-12 : B4185 NP_839727.1 residues 1 to 387 of 387 are 94.83 pct identical to residues 1 to 387 of 387 from Escherichia coli K-12 : B4186 NP_839728.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839729.1 residues 1 to 91 of 91 are 98.90 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839730.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from Escherichia coli K-12 : B4188 NP_839731.2 residues 1 to 142 of 142 are 87.32 pct identical to residues 1 to 142 of 142 from Escherichia coli K-12 : B4189 NP_839732.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo NP_839733.1 negative regulator of ulaG and ulaABCDEF NP_839734.1 residues 1 to 356 of 356 are 96.34 pct identical to residues 1 to 356 of 356 from Escherichia coli K-12 : B4192 NP_839735.2 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr NP_839736.1 residues 1 to 101 of 101 are 99.00 pct identical to residues 1 to 101 of 101 from Escherichia coli K-12 : B4194 NP_839737.1 residues 1 to 154 of 154 are 95.45 pct identical to residues 1 to 154 of 154 from Escherichia coli K-12 : B4195 NP_839738.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization NP_839739.1 UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway NP_839740.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source NP_839741.1 residues 1 to 91 of 91 are 89.01 pct identical to residues 1 to 91 of 91 from Escherichia coli K-12 : B4199 NP_839742.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 NP_839743.1 binds single-stranded DNA at the primosome assembly site NP_839744.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit NP_839745.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk NP_839746.1 residues 1 to 92 of 92 are 92.39 pct identical to residues 3 to 94 of 94 from GenPept : >gb|AAG53987.1|AF327445_1 (AF327445) transposase A [Pantoea agglomerans] NP_839747.1 residues 1 to 193 of 193 are 95.85 pct identical to residues 10 to 202 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445) transposase B [Pantoea agglomerans] NP_839748.1 residues 1 to 237 of 237 are 91.13 pct identical to residues 36 to 272 of 272 from GenPept : >gb|AAK18576.1|AF348706_265 (AF348706) IS600 orfB [Shigella flexneri] NP_839749.1 residues 1 to 100 of 100 are 100.00 pct identical to residues 1 to 100 of 100 from GenPept : >gb|AAL72452.1| (AF386526) hypothetical protein [Shigella flexneri 2a] NP_839750.1 residues 1 to 106 of 106 are 98.11 pct identical to residues 282 to 387 of 387 from GenPept : >gb|AAG59527.1|AE005665_9 (AE005665) orf; conserved hypothetical protein [Escherichia coli O157:H7 EDL933] NP_839751.1 residues 1 to 551 of 551 are 51.70 pct identical to residues 1 to 584 of 584 from GenPept : >gb|AAG59529.1|AE005666_1 (AE005666) restriction modification enzyme S subunit [Escherichia coli O157:H7 EDL933] NP_839752.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839753.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAD44742.1|AF141323_13 (AF141323) TnpH [Shigella flexneri] NP_839754.1 residues 1 to 284 of 284 are 93.66 pct identical to residues 1 to 284 of 284 from Escherichia coli K-12 : B4352 NP_839755.1 residues 1 to 67 of 67 are 100.00 pct identical to residues 1 to 67 of 67 from Escherichia coli K-12 : B4353 NP_839756.1 residues 1 to 721 of 721 are 87.65 pct identical to residues 1 to 721 of 721 from Escherichia coli K-12 : B4354 NP_839757.1 residues 1 to 170 of 170 are 99.41 pct identical to residues 1 to 170 of 170 from GenPept : >emb|CAA86049.2| (Z37980) component C of the 4HPA-hydroxylase [Escherichia coli] NP_839758.1 residues 2 to 243 of 255 are 83.47 pct identical to residues 53 to 294 of 312 from GenPept : >emb|CAD08235.1| (AL627269) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] NP_839759.1 residues 13 to 296 of 296 are 59.85 pct identical to residues 8 to 291 of 298 from GenPept : >gb|AAL20040.1| (AE008748) 4-hydroxyphenylacetate catabolism [Salmonella typhimurium LT2] NP_839760.1 residues 17 to 434 of 451 are 66.58 pct identical to residues 25 to 446 of 455 from GenPept : >emb|CAC90586.1| (AJ414150) 4-hydroxyphenylacetate permease [Yersinia pestis] NP_839761.1 residues 1 to 251 of 267 are 94.02 pct identical to residues 1 to 251 of 262 from GenPept : >emb|CAA86045.1| (Z37980) hypothetical 2,4-dihydroxy-hepta-2-ene-1,7-dioate aldolase [Escherichia coli] NP_839762.1 residues 1 to 267 of 267 are 98.87 pct identical to residues 1 to 267 of 267 from GenPept : >emb|CAA86044.1| (Z37980) 2-oxo-hept-3-ene-1,7-dioate hydratase [Escherichia coli] NP_839763.1 residues 1 to 126 of 126 are 88.09 pct identical to residues 1 to 126 of 126 from GenPept : >emb|CAD08230.1| (AL627269) 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Salmonella enterica subsp. enterica serovar Typhi] NP_839764.1 residues 1 to 283 of 283 are 99.64 pct identical to residues 1 to 283 of 283 from GenPept : >emb|CAA86042.1| (Z37980) homoprotocatechuate dyoxygenase [Escherichia coli] NP_839765.1 residues 1 to 488 of 488 are 99.18 pct identical to residues 1 to 488 of 488 from GenPept : >emb|CAA86041.1| (Z37980) 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase [Escherichia coli] NP_839766.1 residues 1 to 429 of 429 are 95.80 pct identical to residues 1 to 429 of 429 from GenPept : >emb|CAA86040.1| (Z37980) 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomer [Escherichia coli] NP_839767.1 residues 1 to 148 of 148 are 100.00 pct identical to residues 1 to 148 of 148 from GenPept : >emb|CAA86039.1| (Z37980) regulator of the meta operon of 3,4dhpa metabolic pathway [Escherichia coli] NP_839768.1 residues 1 to 554 of 554 are 88.08 pct identical to residues 1 to 551 of 551 from Escherichia coli K-12 : B4355 NP_839769.1 residues 1 to 453 of 453 are 98.89 pct identical to residues 1 to 453 of 453 from Escherichia coli K-12 : B4356; joins former yjiZ and yjjL NP_839770.1 residues 1 to 268 of 268 are 98.50 pct identical to residues 1 to 268 of 268 from Escherichia coli K-12 : B4357 NP_839771.2 catalyzes the transfer of phosphoglycerol to the glucan backbone NP_839772.1 residues 1 to 165 of 165 are 91.51 pct identical to residues 1 to 165 of 165 from Escherichia coli K-12 : B4360 NP_839773.1 acts to load the DnaB helicase onto the initiation site during DNA replication NP_839774.1 This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N' NP_839775.2 residues 1 to 108 of 108 are 99.07 pct identical to residues 1 to 108 of 108 from Escherichia coli K-12 : B4363 NP_839776.1 residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] NP_839777.1 residues 1 to 167 of 167 are 90.41 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] NP_839778.2 regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin NP_839779.1 residues 1 to 262 of 262 are 97.32 pct identical to residues 1 to 262 of 262 from Escherichia coli K-12 : B4367 NP_839780.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit NP_839781.1 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB NP_839782.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18 NP_839783.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily NP_839784.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein NP_839785.1 residues 1 to 201 of 201 are 99.50 pct identical to residues 1 to 201 of 201 from Escherichia coli K-12 : B4376 NP_839786.1 residues 1 to 357 of 357 are 99.71 pct identical to residues 1 to 357 of 357 from Escherichia coli K-12 : B4377 NP_839787.1 residues 1 to 210 of 212 are 95.71 pct identical to residues 1 to 210 of 211 from Escherichia coli K-12 : B4378 NP_839788.1 residues 1 to 287 of 287 are 99.30 pct identical to residues 1 to 287 of 287 from Escherichia coli K-12 : B4379 NP_839789.1 residues 1 to 513 of 513 are 99.22 pct identical to residues 1 to 516 of 516 from Escherichia coli K-12 : B4380 NP_839790.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate NP_839791.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate NP_839792.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose NP_839793.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate NP_839794.1 residues 1 to 87 of 87 are 100.00 pct identical to residues 1 to 87 of 87 from GenPept : >gb|AAG59566.1|AE005669_10 (AE005669) Z5987 gene product [Escherichia coli O157:H7 EDL933] NP_839795.1 residues 1 to 200 of 214 are 95.49 pct identical to residues 1 to 200 of 214 from Escherichia coli K-12 : B4387 NP_839796.1 catalyzes the formation of serine from O-phosphoserine NP_839797.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents NP_839798.2 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide NP_839799.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence NP_839800.2 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan NP_839801.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription NP_839802.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate NP_839803.1 residues 1 to 289 of 289 are 100.00 pct identical to residues 1 to 289 of 289 from Escherichia coli K-12 : B4396 NP_839804.1 residues 1 to 157 of 157 are 100.00 pct identical to residues 1 to 157 of 157 from Escherichia coli K-12 : B4397 NP_839805.1 response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation NP_839806.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation NP_839807.1 residues 1 to 450 of 450 are 94.88 pct identical to residues 1 to 450 of 450 from Escherichia coli K-12 : B4400; tolerance to colicin E2 NP_839808.1 residues 1 to 238 of 238 are 100.00 pct identical to residues 1 to 238 of 238 from Escherichia coli K-12 : B4401 NP_839809.1 residues 1 to 46 of 46 are 100.00 pct identical to residues 1 to 46 of 46 from Escherichia coli K-12 : B4402 NP_839810.1 member of the SPOUT superfamily of methyltransferases