-- dump date 20240506_010026 -- class Genbank::Contig -- table contig_comment -- id comment NC_017770.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003349.1.REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: CanadaREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: SoilREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130,REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, CanadaREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shapedREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26CREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15 Pseudo Genes (ambiguous residues) :: 0 of 15REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15 Pseudo Genes (ambiguous residues) :: 0 of 15 Pseudo Genes (frameshifted) :: 5 of 15REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15 Pseudo Genes (ambiguous residues) :: 0 of 15 Pseudo Genes (frameshifted) :: 5 of 15 Pseudo Genes (incomplete) :: 6 of 15REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15 Pseudo Genes (ambiguous residues) :: 0 of 15 Pseudo Genes (frameshifted) :: 5 of 15 Pseudo Genes (incomplete) :: 6 of 15 Pseudo Genes (internal stop) :: 5 of 15REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15 Pseudo Genes (ambiguous residues) :: 0 of 15 Pseudo Genes (frameshifted) :: 5 of 15 Pseudo Genes (incomplete) :: 6 of 15 Pseudo Genes (internal stop) :: 5 of 15 Pseudo Genes (multiple problems) :: 1 of 15REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15 Pseudo Genes (ambiguous residues) :: 0 of 15 Pseudo Genes (frameshifted) :: 5 of 15 Pseudo Genes (incomplete) :: 6 of 15 Pseudo Genes (internal stop) :: 5 of 15 Pseudo Genes (multiple problems) :: 1 of 15 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003349.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089454 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Solitalea canadensis DSM 3403 collection_date :: Missing lat_lon :: 45.423 -75.697 depth :: Missing alt_elev :: Missing country :: Canada environment :: Soil num_replicons :: 1 ref_biomaterial :: DSM 3403, ATCC 29591, JCM 21819, IFO 15130, KACC 13276, CIP 104802 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-GS-FLX-Titanium, Illumina assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04018 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: soil, Ottawa, Canada Isolation Comments :: doi:10.1099/00207713-30-2-429 Cell Shape :: Filament-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 26C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 12/24/2023 10:01:52 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,456 CDSs (total) :: 4,381 Genes (coding) :: 4,366 CDSs (with protein) :: 4,366 Genes (RNA) :: 75 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 3 Pseudo Genes (total) :: 15 CDSs (without protein) :: 15 Pseudo Genes (ambiguous residues) :: 0 of 15 Pseudo Genes (frameshifted) :: 5 of 15 Pseudo Genes (incomplete) :: 6 of 15 Pseudo Genes (internal stop) :: 5 of 15 Pseudo Genes (multiple problems) :: 1 of 15 ##Genome-Annotation-Data-END## COMPLETENESS: full length.