-- dump date 20240506_003836 -- class Genbank::Contig -- table contig_comment -- id comment NC_015152.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002541.1.REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. LoefflerREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa BuddyREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USAREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, SedimentREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USAREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: NonmotileREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30CREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted) :: 1 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted) :: 1 of 4 Pseudo Genes (incomplete) :: 1 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted) :: 1 of 4 Pseudo Genes (incomplete) :: 1 of 4 Pseudo Genes (internal stop) :: 2 of 4REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted) :: 1 of 4 Pseudo Genes (incomplete) :: 1 of 4 Pseudo Genes (internal stop) :: 2 of 4 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted) :: 1 of 4 Pseudo Genes (incomplete) :: 1 of 4 Pseudo Genes (internal stop) :: 2 of 4 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002541.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086836 Source DNA and organism available from Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Contacts: Frank E. Loeffler (frank.loeffler@ce.gatech.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sphaerochaeta globosa Buddy collection_date :: Missing lat_lon :: 42.697144 -84.378797 depth :: Missing alt_elev :: Missing country :: USA environment :: Aquatic, Fresh water, Sediment num_replicons :: 1 ref_biomaterial :: DSM 22777 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gc01664 Funding Program :: DOE-CSP 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Red Cedar River in Okemos, Michigan, USA Cell Shape :: Spherel-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454, Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:31:46 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,106 CDSs (total) :: 3,041 Genes (coding) :: 3,037 CDSs (with protein) :: 3,037 Genes (RNA) :: 65 rRNAs :: 6, 4, 4 (5S, 16S, 23S) complete rRNAs :: 6, 4, 4 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 4 CDSs (without protein) :: 4 Pseudo Genes (ambiguous residues) :: 0 of 4 Pseudo Genes (frameshifted) :: 1 of 4 Pseudo Genes (incomplete) :: 1 of 4 Pseudo Genes (internal stop) :: 2 of 4 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.