-- dump date 20140620_072151 -- class Genbank::Contig -- table contig_comment -- id comment NC_017098.1 PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: KenyaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh waterPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: AnaerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGSPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: YesPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMPPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under tronaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi inPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in KenyaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et alPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: MotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: HalophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-coloredPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP003282. URL -- http://www.jgi.doe.gov JGI Project ID: 4085240 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Spirochaeta africana DSM 8902 collection_date :: 1992 lat_lon :: -1.944676 36.252237 depth :: Missing alt_elev :: Missing country :: Kenya environment :: Alkaline salt lakes, Fresh water num_replicons :: 1 ref_biomaterial :: DSM 8902, ATCC 700263 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Anaerobe isol_growth_condt :: 8573509 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi02936 Type Strain :: Yes Greengenes ID :: 3802 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Bacterial bloom in the brine under trona from alkaline equatorial Lake Magadi in Kenya Isolation Comments :: isolated by Zhilina et al Cell Shape :: Spiral-shaped Motility :: Motile Temperature Range :: Mesophile Temperature Optimum :: 35C Salinity :: Halophile pH :: 8.8 - 9.7 Gram Staining :: Gram- Diseases :: None Phenotypes :: Orange-colored ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length.