-- dump date 20240506_044155 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP045927.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP045927.1.REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads.REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0xREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniIONREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19 Pseudo Genes (frameshifted) :: 4 of 19REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19 Pseudo Genes (frameshifted) :: 4 of 19 Pseudo Genes (incomplete) :: 9 of 19REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19 Pseudo Genes (frameshifted) :: 4 of 19 Pseudo Genes (incomplete) :: 9 of 19 Pseudo Genes (internal stop) :: 7 of 19REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19 Pseudo Genes (frameshifted) :: 4 of 19 Pseudo Genes (incomplete) :: 9 of 19 Pseudo Genes (internal stop) :: 7 of 19 Pseudo Genes (multiple problems) :: 1 of 19REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19 Pseudo Genes (frameshifted) :: 4 of 19 Pseudo Genes (incomplete) :: 9 of 19 Pseudo Genes (internal stop) :: 7 of 19 Pseudo Genes (multiple problems) :: 1 of 19 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19 Pseudo Genes (frameshifted) :: 4 of 19 Pseudo Genes (incomplete) :: 9 of 19 Pseudo Genes (internal stop) :: 7 of 19 Pseudo Genes (multiple problems) :: 1 of 19 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP045927.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Douglas Rhoads. ##Genome-Assembly-Data-START## Assembly Date :: 10-SEP-2018 Assembly Method :: Unicycler v. Galaxy Version 0.4.8.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 210.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_011466855.1-RS_2024_03_28 Annotation Date :: 03/28/2024 05:25:42 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,424 CDSs (total) :: 2,342 Genes (coding) :: 2,323 CDSs (with protein) :: 2,323 Genes (RNA) :: 82 rRNAs :: 7, 6, 6 (5S, 16S, 23S) complete rRNAs :: 7, 6, 6 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 4 Pseudo Genes (total) :: 19 CDSs (without protein) :: 19 Pseudo Genes (ambiguous residues) :: 0 of 19 Pseudo Genes (frameshifted) :: 4 of 19 Pseudo Genes (incomplete) :: 9 of 19 Pseudo Genes (internal stop) :: 7 of 19 Pseudo Genes (multiple problems) :: 1 of 19 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.