-- dump date 20140620_074715 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_415519.1 82749778 3794488 517..1878 1 NC_007622.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1878 dnaA 3794488 dnaA Staphylococcus aureus RF122 chromosomal replication initiation protein YP_415519.1 517 D 273036 CDS YP_415520.1 82749779 3793349 2156..3289 1 NC_007622.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3289 dnaN 3793349 dnaN Staphylococcus aureus RF122 DNA polymerase III subunit beta YP_415520.1 2156 D 273036 CDS YP_415521.1 82749780 3793895 3670..3915 1 NC_007622.1 hypothetical protein 3915 3793895 SAB0003 Staphylococcus aureus RF122 hypothetical protein YP_415521.1 3670 D 273036 CDS YP_415522.1 82749781 3794273 3912..5024 1 NC_007622.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 5024 recF 3794273 recF Staphylococcus aureus RF122 recombination protein F YP_415522.1 3912 D 273036 CDS YP_415523.1 82749782 3794240 5034..6968 1 NC_007622.1 DNA gyrase subunit B 6968 gyrB 3794240 gyrB Staphylococcus aureus RF122 DNA gyrase subunit B YP_415523.1 5034 D 273036 CDS YP_415524.1 82749783 3794239 7005..9665 1 NC_007622.1 DNA gyrase subunit A 9665 gyrA 3794239 gyrA Staphylococcus aureus RF122 DNA gyrase subunit A YP_415524.1 7005 D 273036 CDS YP_415525.1 82749784 3793896 complement(9753..10583) 1 NC_007622.1 hypothetical protein 10583 3793896 SAB0007c Staphylococcus aureus RF122 hypothetical protein YP_415525.1 9753 R 273036 CDS YP_415526.1 82749785 3794096 10890..12404 1 NC_007622.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 12404 hutH 3794096 hutH Staphylococcus aureus RF122 histidine ammonia-lyase YP_415526.1 10890 D 273036 CDS YP_415527.1 82749786 3794621 12781..14067 1 NC_007622.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 14067 serS 3794621 serS Staphylococcus aureus RF122 seryl-tRNA synthetase YP_415527.1 12781 D 273036 CDS YP_415528.1 82749787 3793897 14706..15401 1 NC_007622.1 hypothetical protein 15401 3793897 SAB0010 Staphylococcus aureus RF122 hypothetical protein YP_415528.1 14706 D 273036 CDS YP_415529.1 82749788 3793898 15398..15727 1 NC_007622.1 hypothetical protein 15727 3793898 SAB0011 Staphylococcus aureus RF122 hypothetical protein YP_415529.1 15398 D 273036 CDS YP_415530.1 82749789 3793899 16090..17058 1 NC_007622.1 homoserine-o-acetyltransferase 17058 3793899 SAB0012 Staphylococcus aureus RF122 homoserine-o-acetyltransferase YP_415530.1 16090 D 273036 CDS YP_415531.1 82749790 3793900 17303..18289 1 NC_007622.1 hypothetical protein 18289 3793900 SAB0013 Staphylococcus aureus RF122 hypothetical protein YP_415531.1 17303 D 273036 CDS YP_415532.1 82749791 3793901 18304..20271 1 NC_007622.1 hypothetical protein 20271 3793901 SAB0014 Staphylococcus aureus RF122 hypothetical protein YP_415532.1 18304 D 273036 CDS YP_415533.1 82749792 3795082 20268..20714 1 NC_007622.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 20714 rplI 3795082 rplI Staphylococcus aureus RF122 50S ribosomal protein L9 YP_415533.1 20268 D 273036 CDS YP_415534.1 82749793 3794491 20746..22146 1 NC_007622.1 replicative DNA helicase 22146 dnaC 3794491 dnaC Staphylococcus aureus RF122 replicative DNA helicase YP_415534.1 20746 D 273036 CDS YP_415535.1 82749794 3794043 22426..23709 1 NC_007622.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 23709 purA 3794043 purA Staphylococcus aureus RF122 adenylosuccinate synthetase YP_415535.1 22426 D 273036 CDS YP_415536.1 82749795 3794179 25153..25860 1 NC_007622.1 two-component response regulator 25860 yycF 3794179 yycF Staphylococcus aureus RF122 two-component response regulator YP_415536.1 25153 D 273036 CDS YP_415537.1 82749796 3794180 25873..27699 1 NC_007622.1 two-component sensor histidine kinase 27699 yycG 3794180 yycG Staphylococcus aureus RF122 two-component sensor histidine kinase YP_415537.1 25873 D 273036 CDS YP_415538.1 82749797 3794181 27683..29026 1 NC_007622.1 hypothetical protein 29026 yycH 3794181 yycH Staphylococcus aureus RF122 hypothetical protein YP_415538.1 27683 D 273036 CDS YP_415539.1 82749798 3794182 29027..29815 1 NC_007622.1 hypothetical protein 29815 yycI 3794182 yycI Staphylococcus aureus RF122 hypothetical protein YP_415539.1 29027 D 273036 CDS YP_415540.1 82749799 3794183 30204..31004 1 NC_007622.1 hypothetical protein 31004 yycJ 3794183 yycJ Staphylococcus aureus RF122 hypothetical protein YP_415540.1 30204 D 273036 CDS YP_415541.1 82749800 3793902 31231..33549 1 NC_007622.1 5' nucleotidase 33549 3793902 SAB0023 Staphylococcus aureus RF122 5' nucleotidase YP_415541.1 31231 D 273036 CDS YP_415542.1 82749801 3793903 33918..34397 1 NC_007622.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 34397 3793903 SAB0024 Staphylococcus aureus RF122 rRNA large subunit methyltransferase YP_415542.1 33918 D 273036 CDS YP_415543.1 82749802 3793904 34735..35634 1 NC_007622.1 hypothetical protein 35634 3793904 SAB0025 Staphylococcus aureus RF122 hypothetical protein YP_415543.1 34735 D 273036 CDS YP_415544.1 82749803 3793905 36930..37709 1 NC_007622.1 enterotoxin protein 37709 3793905 SAB0026 Staphylococcus aureus RF122 enterotoxin protein YP_415544.1 36930 D 273036 CDS YP_415545.1 82749804 3793906 complement(37894..38373) 1 NC_007622.1 hypothetical protein 38373 3793906 SAB0027c Staphylococcus aureus RF122 hypothetical protein YP_415545.1 37894 R 273036 CDS YP_415546.1 82749805 3793757 complement(38856..39611) 1 NC_007622.1 hypothetical protein 39611 3793757 SAB0028c Staphylococcus aureus RF122 hypothetical protein YP_415546.1 38856 R 273036 CDS YP_415547.1 82749806 3793758 complement(39611..39877) 1 NC_007622.1 hypothetical protein 39877 3793758 SAB0029c Staphylococcus aureus RF122 hypothetical protein YP_415547.1 39611 R 273036 CDS YP_415548.1 82749807 3793759 40008..41075 1 NC_007622.1 hypothetical protein 41075 3793759 SAB0030 Staphylococcus aureus RF122 hypothetical protein YP_415548.1 40008 D 273036 CDS YP_415549.1 82749808 3793760 41106..42440 1 NC_007622.1 hydroxyacylglutathione hydrolase 42440 3793760 SAB0031 Staphylococcus aureus RF122 hydroxyacylglutathione hydrolase YP_415549.1 41106 D 273036 CDS YP_415550.1 82749809 3793761 42459..43652 1 NC_007622.1 sulfide-quinone reductase 43652 3793761 SAB0032 Staphylococcus aureus RF122 sulfide-quinone reductase YP_415550.1 42459 D 273036 CDS YP_415551.1 82749810 3793762 complement(44316..45302) 1 NC_007622.1 hypothetical protein 45302 3793762 SAB0033c Staphylococcus aureus RF122 hypothetical protein YP_415551.1 44316 R 273036 CDS YP_415552.1 82749811 3793763 45611..45814 1 NC_007622.1 hypothetical protein 45814 3793763 SAB0034 Staphylococcus aureus RF122 hypothetical protein YP_415552.1 45611 D 273036 CDS YP_415553.1 82749812 3793764 45864..46160 1 NC_007622.1 hypothetical protein 46160 3793764 SAB0035 Staphylococcus aureus RF122 hypothetical protein YP_415553.1 45864 D 273036 CDS YP_415554.1 82749813 3793765 46608..47339 1 NC_007622.1 hypothetical protein 47339 3793765 SAB0036 Staphylococcus aureus RF122 hypothetical protein YP_415554.1 46608 D 273036 CDS YP_415555.1 82749814 3793766 47495..48043 1 NC_007622.1 hypothetical protein 48043 3793766 SAB0037 Staphylococcus aureus RF122 hypothetical protein YP_415555.1 47495 D 273036 CDS YP_415556.1 82749815 3794475 48181..49167 1 NC_007622.1 1-phosphatidylinositol phosphodiesterase 49167 plc 3794475 plc Staphylococcus aureus RF122 1-phosphatidylinositol phosphodiesterase YP_415556.1 48181 D 273036 CDS YP_415557.1 82749816 3793768 50209..50979 1 NC_007622.1 hypothetical protein 50979 3793768 SAB0040 Staphylococcus aureus RF122 hypothetical protein YP_415557.1 50209 D 273036 CDS YP_415558.1 82749817 3793769 51063..53300 1 NC_007622.1 transcriptional regulator 53300 3793769 SAB0041 Staphylococcus aureus RF122 transcriptional regulator YP_415558.1 51063 D 273036 CDS YP_415559.1 82749818 3793770 53451..54629 1 NC_007622.1 aminoacylase 54629 3793770 SAB0042 Staphylococcus aureus RF122 aminoacylase YP_415559.1 53451 D 273036 CDS YP_415560.1 82749819 3793771 54631..56019 1 NC_007622.1 antibiotic resistance-related transmembrane efflux protein 56019 3793771 SAB0043 Staphylococcus aureus RF122 antibiotic resistance-related transmembrane efflux protein YP_415560.1 54631 D 273036 CDS YP_415561.1 82749820 3793772 complement(56508..58175) 1 NC_007622.1 membrane transporter 58175 3793772 SAB0044c Staphylococcus aureus RF122 membrane transporter YP_415561.1 56508 R 273036 CDS YP_415562.1 82749821 3793773 complement(58494..60269) 1 NC_007622.1 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 60269 3793773 SAB0045c Staphylococcus aureus RF122 myosin-cross-reactive antigen YP_415562.1 58494 R 273036 CDS YP_415563.1 82749822 3793774 complement(60443..61315) 1 NC_007622.1 membrane transporter 61315 3793774 SAB0046c Staphylococcus aureus RF122 membrane transporter YP_415563.1 60443 R 273036 CDS YP_415564.1 82749823 3793775 61429..62826 1 NC_007622.1 transcriptional regulator 62826 3793775 SAB0047 Staphylococcus aureus RF122 transcriptional regulator YP_415564.1 61429 D 273036 CDS YP_415565.1 82749824 3794555 63016..63489 1 NC_007622.1 hypothetical protein 63489 3794555 SAB0048 Staphylococcus aureus RF122 hypothetical protein YP_415565.1 63016 D 273036 CDS YP_415566.1 82749825 3794753 63751..65343 1 NC_007622.1 L-lactate permease 65343 lldP 3794753 lldP Staphylococcus aureus RF122 L-lactate permease YP_415566.1 63751 D 273036 CDS YP_415567.1 82749826 3793175 complement(67420..68172) 1 NC_007622.1 SarS family transcriptional regulator 68172 sarS 3793175 sarS Staphylococcus aureus RF122 SarS family transcriptional regulator YP_415567.1 67420 R 273036 CDS YP_415568.1 82749827 3792997 complement(68541..69536) 1 NC_007622.1 siderophore transport protein 69536 sirC 3792997 sirC Staphylococcus aureus RF122 siderophore transport protein YP_415568.1 68541 R 273036 CDS YP_415569.1 82749828 3794633 complement(69533..70528) 1 NC_007622.1 siderophore transport protein 70528 sirB 3794633 sirB Staphylococcus aureus RF122 siderophore transport protein YP_415569.1 69533 R 273036 CDS YP_415570.1 82749829 3794632 complement(70544..71536) 1 NC_007622.1 iron-regulated lipoprotein 71536 sirA 3794632 sirA Staphylococcus aureus RF122 iron-regulated lipoprotein YP_415570.1 70544 R 273036 CDS YP_415571.1 82749830 3794556 71767..72747 1 NC_007622.1 cysteine synthase A protein 72747 3794556 SAB0055 Staphylococcus aureus RF122 cysteine synthase A protein YP_415571.1 71767 D 273036 CDS YP_415572.1 82749831 3794557 72744..73754 1 NC_007622.1 ornithine cyclodeaminase protein 73754 3794557 SAB0056 Staphylococcus aureus RF122 ornithine cyclodeaminase protein YP_415572.1 72744 D 273036 CDS YP_415573.1 82749832 3794558 73775..75529 1 NC_007622.1 siderophore biosynthesis protein 75529 3794558 SAB0057 Staphylococcus aureus RF122 siderophore biosynthesis protein YP_415573.1 73775 D 273036 CDS YP_415574.1 82749833 3794559 75522..76778 1 NC_007622.1 membrane transporter 76778 3794559 SAB0058 Staphylococcus aureus RF122 membrane transporter YP_415574.1 75522 D 273036 CDS YP_415575.1 82749834 3794560 76768..78504 1 NC_007622.1 siderophore biosynthesis protein 78504 3794560 SAB0059 Staphylococcus aureus RF122 siderophore biosynthesis protein YP_415575.1 76768 D 273036 CDS YP_415576.1 82749835 3794561 78485..80263 1 NC_007622.1 siderophore biosynthesis protein 80263 3794561 SAB0060 Staphylococcus aureus RF122 siderophore biosynthesis protein YP_415576.1 78485 D 273036 CDS YP_415577.1 82749836 3794562 80238..81014 1 NC_007622.1 aldolase 81014 3794562 SAB0061 Staphylococcus aureus RF122 aldolase YP_415577.1 80238 D 273036 CDS YP_415578.1 82749837 3794563 81014..82216 1 NC_007622.1 diaminopimelate decarboxylase protein 82216 3794563 SAB0062 Staphylococcus aureus RF122 diaminopimelate decarboxylase protein YP_415578.1 81014 D 273036 CDS YP_415579.1 82749838 3794564 82220..82984 1 NC_007622.1 hypothetical protein 82984 3794564 SAB0063 Staphylococcus aureus RF122 hypothetical protein YP_415579.1 82220 D 273036 CDS YP_415580.1 82749839 3794566 83609..84403 1 NC_007622.1 hypothetical protein 84403 3794566 SAB0065 Staphylococcus aureus RF122 hypothetical protein YP_415580.1 83609 D 273036 CDS YP_415581.1 82749840 3794567 84615..85391 1 NC_007622.1 acetoin reductase 85391 3794567 SAB0066 Staphylococcus aureus RF122 acetoin reductase YP_415581.1 84615 D 273036 CDS YP_415582.1 82749841 3794568 85737..86708 1 NC_007622.1 UDP-glucose 4-epimerase 86708 3794568 SAB0067 Staphylococcus aureus RF122 UDP-glucose 4-epimerase YP_415582.1 85737 D 273036 CDS YP_415583.1 82749842 3792662 86671..87363 1 NC_007622.1 capsular polysaccharide biosynthesis glycosyltransferase 87363 cap5M 3792662 cap5M Staphylococcus aureus RF122 capsular polysaccharide biosynthesis glycosyltransferase YP_415583.1 86671 D 273036 CDS YP_415584.1 82749843 3792663 87573..88739 1 NC_007622.1 capsular glycosyltransferase 88739 cap8H 3792663 cap8H Staphylococcus aureus RF122 capsular glycosyltransferase YP_415584.1 87573 D 273036 CDS YP_415585.1 82749844 3794845 88720..89958 1 NC_007622.1 hypothetical protein 89958 cps2H 3794845 cps2H Staphylococcus aureus RF122 hypothetical protein YP_415585.1 88720 D 273036 CDS YP_415586.1 82749845 3794569 89948..91378 1 NC_007622.1 lipopolysaccharide flipase protein 91378 3794569 SAB0071 Staphylococcus aureus RF122 lipopolysaccharide flipase protein YP_415586.1 89948 D 273036 CDS YP_415587.1 82749846 3793002 91647..92246 1 NC_007622.1 [Mn/Fe]; manganese/iron superoxide dismutase 92246 sodM 3793002 sodM Staphylococcus aureus RF122 manganese/iron superoxide dismutase YP_415587.1 91647 D 273036 CDS YP_415588.1 82749847 3794570 92615..93340 1 NC_007622.1 surface protein 93340 3794570 SAB0073 Staphylococcus aureus RF122 surface protein YP_415588.1 92615 D 273036 CDS YP_415589.1 82749848 3794571 complement(93531..94271) 1 NC_007622.1 transcriptional regulator 94271 3794571 SAB0074c Staphylococcus aureus RF122 transcriptional regulator YP_415589.1 93531 R 273036 CDS YP_415590.1 82749849 3794479 94522..95229 1 NC_007622.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 95229 deoD1 3794479 deoD1 Staphylococcus aureus RF122 purine nucleoside phosphorylase YP_415590.1 94522 D 273036 CDS YP_415591.1 82749850 3794572 95230..96588 1 NC_007622.1 membrane transporter 96588 3794572 SAB0076 Staphylococcus aureus RF122 membrane transporter YP_415591.1 95230 D 273036 CDS YP_415592.1 82749851 3794477 96669..97331 1 NC_007622.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 97331 deoC1 3794477 deoC1 Staphylococcus aureus RF122 deoxyribose-phosphate aldolase YP_415592.1 96669 D 273036 CDS YP_415593.1 82749852 3793351 97359..98537 1 NC_007622.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 98537 drm 3793351 drm Staphylococcus aureus RF122 phosphopentomutase YP_415593.1 97359 D 273036 CDS YP_415594.1 82749853 3794573 complement(98761..98985) 1 NC_007622.1 hypothetical protein 98985 3794573 SAB0079c Staphylococcus aureus RF122 hypothetical protein YP_415594.1 98761 R 273036 CDS YP_415595.1 82749854 3794574 complement(99008..99547) 1 NC_007622.1 hypothetical protein 99547 3794574 SAB0080c Staphylococcus aureus RF122 hypothetical protein YP_415595.1 99008 R 273036 CDS YP_415596.1 82749855 3795237 complement(99992..100807) 1 NC_007622.1 phosphonate ABC transporter permease 100807 3795237 SAB0081c Staphylococcus aureus RF122 phosphonate ABC transporter permease YP_415596.1 99992 R 273036 CDS YP_415597.1 82749856 3795239 complement(101604..102377) 1 NC_007622.1 transport system protein 102377 3795239 SAB0083c Staphylococcus aureus RF122 transport system protein YP_415597.1 101604 R 273036 CDS YP_415598.1 82749857 3795240 complement(102591..103547) 1 NC_007622.1 transport protein 103547 3795240 SAB0084c Staphylococcus aureus RF122 transport protein YP_415598.1 102591 R 273036 CDS YP_415599.1 82749858 3795241 103777..105321 1 NC_007622.1 hypothetical protein 105321 3795241 SAB0085 Staphylococcus aureus RF122 hypothetical protein YP_415599.1 103777 D 273036 CDS YP_415600.1 82749859 3794844 105372..106865 1 NC_007622.1 2',3'-cyclic-nucleotide 2'-phosphodiesterase 106865 cpdB 3794844 cpdB Staphylococcus aureus RF122 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_415600.1 105372 D 273036 CDS YP_415601.1 82749860 3795243 107836..109011 1 NC_007622.1 transcriptional regulator 109011 3795243 SAB0088 Staphylococcus aureus RF122 transcriptional regulator YP_415601.1 107836 D 273036 CDS YP_415602.1 82749861 3795244 109399..112008 1 NC_007622.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 112008 3795244 SAB0089 Staphylococcus aureus RF122 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_415602.1 109399 D 273036 CDS YP_415603.1 82749862 3794399 112353..113021 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapA 113021 capA 3794399 capA Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapA YP_415603.1 112353 D 273036 CDS YP_415604.1 82749863 3794400 113037..113723 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapB 113723 capB 3794400 capB Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapB YP_415604.1 113037 D 273036 CDS YP_415605.1 82749864 3794401 113726..114490 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapC 114490 capC 3794401 capC Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapC YP_415605.1 113726 D 273036 CDS YP_415606.1 82749865 3794402 114510..116333 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapD 116333 capD 3794402 capD Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapD YP_415606.1 114510 D 273036 CDS YP_415607.1 82749866 3794403 116323..117351 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapE 117351 capE 3794403 capE Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapE YP_415607.1 116323 D 273036 CDS YP_415608.1 82749867 3794404 117364..118473 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapF 118473 capF 3794404 capF Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapF YP_415608.1 117364 D 273036 CDS YP_415609.1 82749868 3794405 118477..119601 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapG 119601 capG 3794405 capG Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapG YP_415609.1 118477 D 273036 CDS YP_415610.1 82749869 3792664 119604..120683 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapH 120683 cap8H 3792664 cap8H Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapH YP_415610.1 119604 D 273036 CDS YP_415611.1 82749870 3792665 120676..122070 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapI 122070 cap8I 3792665 cap8I Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapI YP_415611.1 120676 D 273036 CDS YP_415612.1 82749871 3792666 122067..122624 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapJ 122624 cap8J 3792666 cap8J Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapJ YP_415612.1 122067 D 273036 CDS YP_415613.1 82749872 3792667 122633..123871 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapK 123871 cap8K 3792667 cap8K Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapK YP_415613.1 122633 D 273036 CDS YP_415614.1 82749873 3794406 123905..125110 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapL 125110 capL 3794406 capL Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapL YP_415614.1 123905 D 273036 CDS YP_415615.1 82749874 3794407 125121..125678 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapM 125678 capM 3794407 capM Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapM YP_415615.1 125121 D 273036 CDS YP_415616.1 82749875 3794408 125678..126565 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapN 126565 capN 3794408 capN Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapN YP_415616.1 125678 D 273036 CDS YP_415617.1 82749876 3794409 126619..127881 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapO 127881 capO 3794409 capO Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapO YP_415617.1 126619 D 273036 CDS YP_415618.1 82749877 3794410 127928..129103 1 NC_007622.1 capsular polysaccharide synthesis enzyme CapP 129103 capP 3794410 capP Staphylococcus aureus RF122 capsular polysaccharide synthesis enzyme CapP YP_415618.1 127928 D 273036 CDS YP_415619.1 82749878 3795246 complement(129501..129884) 1 NC_007622.1 hypothetical protein 129884 3795246 SAB0107c Staphylococcus aureus RF122 hypothetical protein YP_415619.1 129501 R 273036 CDS YP_415620.1 82749879 3794897 130311..131798 1 NC_007622.1 aldehyde dehdydrogenase 131798 aldA 3794897 aldA Staphylococcus aureus RF122 aldehyde dehdydrogenase YP_415620.1 130311 D 273036 CDS YP_415621.1 82749880 3795247 132442..133401 1 NC_007622.1 cation-efflux system membrane protein 133401 3795247 SAB0109 Staphylococcus aureus RF122 cation-efflux system membrane protein YP_415621.1 132442 D 273036 CDS YP_415622.1 82749881 3795248 complement(133462..133665) 1 NC_007622.1 hypothetical protein 133665 3795248 SAB0110c Staphylococcus aureus RF122 hypothetical protein YP_415622.1 133462 R 273036 CDS YP_415623.1 82749882 3795249 133844..134356 1 NC_007622.1 hypothetical protein 134356 3795249 SAB0111 Staphylococcus aureus RF122 hypothetical protein YP_415623.1 133844 D 273036 CDS YP_415624.1 82749883 3795250 134697..135437 1 NC_007622.1 nitrate/nitrite system ATP-binding ABC transporter 135437 3795250 SAB0112 Staphylococcus aureus RF122 nitrate/nitrite system ATP-binding ABC transporter YP_415624.1 134697 D 273036 CDS YP_415625.1 82749884 3795251 135451..136425 1 NC_007622.1 lipoprotein 136425 3795251 SAB0113 Staphylococcus aureus RF122 lipoprotein YP_415625.1 135451 D 273036 CDS YP_415626.1 82749885 3795252 136422..137183 1 NC_007622.1 ABC transporter permease 137183 3795252 SAB0114 Staphylococcus aureus RF122 ABC transporter permease YP_415626.1 136422 D 273036 CDS YP_415627.1 82749886 3795253 137196..138227 1 NC_007622.1 hypothetical protein 138227 3795253 SAB0115 Staphylococcus aureus RF122 hypothetical protein YP_415627.1 137196 D 273036 CDS YP_415628.1 82749887 3795254 138444..138698 1 NC_007622.1 hypothetical protein 138698 3795254 SAB0116 Staphylococcus aureus RF122 hypothetical protein YP_415628.1 138444 D 273036 CDS YP_415629.1 82749888 3795255 138873..140000 1 NC_007622.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase 140000 3795255 SAB0117 Staphylococcus aureus RF122 formate dehydrogenase YP_415629.1 138873 D 273036 CDS YP_415630.1 82749889 3793288 140385..141635 1 NC_007622.1 integral membrane transport protein 141635 3793288 SAB0118 Staphylococcus aureus RF122 integral membrane transport protein YP_415630.1 140385 D 273036 CDS YP_415631.1 82749890 3793289 142064..149254 1 NC_007622.1 surfactin/siderophore synthetase 149254 3793289 SAB0119 Staphylococcus aureus RF122 surfactin/siderophore synthetase YP_415631.1 142064 D 273036 CDS YP_415632.1 82749891 3793290 149267..149911 1 NC_007622.1 4'-phosphopantetheinyl transferase superfamily protein 149911 3793290 SAB0120 Staphylococcus aureus RF122 4'-phosphopantetheinyl transferase superfamily protein YP_415632.1 149267 D 273036 CDS YP_415633.1 82749892 3793291 complement(150240..150734) 1 NC_007622.1 hypothetical protein 150734 3793291 SAB0121c Staphylococcus aureus RF122 hypothetical protein YP_415633.1 150240 R 273036 CDS YP_415634.1 82749893 3793292 complement(151005..151775) 1 NC_007622.1 acetylglutamate kinase 151775 3793292 SAB0122c Staphylococcus aureus RF122 acetylglutamate kinase YP_415634.1 151005 R 273036 CDS YP_415635.1 82749894 3793293 complement(151791..153032) 1 NC_007622.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 153032 argJ 3793293 argJ Staphylococcus aureus RF122 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_415635.1 151791 R 273036 CDS YP_415636.1 82749895 3793295 complement(154114..155298) 1 NC_007622.1 ornithine aminotransferase 155298 3793295 SAB0125c Staphylococcus aureus RF122 ornithine aminotransferase YP_415636.1 154114 R 273036 CDS YP_415637.1 82749896 3793296 complement(155547..156902) 1 NC_007622.1 branched chain amino acid ABC transporter carrier protein 156902 3793296 SAB0126c Staphylococcus aureus RF122 branched chain amino acid ABC transporter carrier protein YP_415637.1 155547 R 273036 CDS YP_415638.1 82749897 3793297 complement(157179..157736) 1 NC_007622.1 hydrolase 157736 3793297 SAB0127c Staphylococcus aureus RF122 hydrolase YP_415638.1 157179 R 273036 CDS YP_415639.1 82749898 3793298 complement(157802..159442) 1 NC_007622.1 pyruvate decarboxylase 159442 3793298 SAB0128c Staphylococcus aureus RF122 pyruvate decarboxylase YP_415639.1 157802 R 273036 CDS YP_415640.1 82749899 3793642 complement(159714..161759) 1 NC_007622.1 phosphotransferase system enzyme II glucose-specific factor IIA 161759 glcA 3793642 glcA Staphylococcus aureus RF122 phosphotransferase system enzyme II glucose-specific factor IIA YP_415640.1 159714 R 273036 CDS YP_415641.1 82749900 3793299 162345..163379 1 NC_007622.1 hypothetical protein 163379 3793299 SAB0130 Staphylococcus aureus RF122 hypothetical protein YP_415641.1 162345 D 273036 CDS YP_415642.1 82749901 3793300 163397..164296 1 NC_007622.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 164296 murQ 3793300 murQ Staphylococcus aureus RF122 N-acetylmuramic acid-6-phosphate etherase YP_415642.1 163397 D 273036 CDS YP_415643.1 82749902 3793301 164308..165762 1 NC_007622.1 PTS system sucrose-specific IIBC component 165762 3793301 SAB0132 Staphylococcus aureus RF122 PTS system sucrose-specific IIBC component YP_415643.1 164308 D 273036 CDS YP_415644.1 82749903 3793302 165765..166640 1 NC_007622.1 RpiR family transcriptional regulator 166640 3793302 SAB0133 Staphylococcus aureus RF122 RpiR family transcriptional regulator YP_415644.1 165765 D 273036 CDS YP_415645.1 82749904 3793303 complement(166836..167117) 1 NC_007622.1 hypothetical protein 167117 3793303 SAB0134c Staphylococcus aureus RF122 hypothetical protein YP_415645.1 166836 R 273036 CDS YP_415646.1 82749905 3793304 167330..170119 1 NC_007622.1 type I restriction enzyme restriction chain 170119 3793304 SAB0135 Staphylococcus aureus RF122 type I restriction enzyme restriction chain YP_415646.1 167330 D 273036 CDS YP_415647.1 82749906 3793305 complement(170266..170865) 1 NC_007622.1 hypothetical protein 170865 3793305 SAB0136c Staphylococcus aureus RF122 hypothetical protein YP_415647.1 170266 R 273036 CDS YP_415648.1 82749907 3793306 170989..172101 1 NC_007622.1 hypothetical protein 172101 3793306 SAB0137 Staphylococcus aureus RF122 hypothetical protein YP_415648.1 170989 D 273036 CDS YP_415649.1 82749908 3793307 172098..172778 1 NC_007622.1 ABC transporter ATP-binding protein 172778 3793307 SAB0138 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415649.1 172098 D 273036 CDS YP_415650.1 82749909 3794575 172967..173953 1 NC_007622.1 ABC transporter ATP-binding protein 173953 3794575 SAB0139 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415650.1 172967 D 273036 CDS YP_415651.1 82749910 3794576 174161..174382 1 NC_007622.1 hypothetical protein 174382 3794576 SAB0140 Staphylococcus aureus RF122 hypothetical protein YP_415651.1 174161 D 273036 CDS YP_415652.1 82749911 3794577 174453..176138 1 NC_007622.1 hypothetical protein 176138 3794577 SAB0141 Staphylococcus aureus RF122 hypothetical protein YP_415652.1 174453 D 273036 CDS YP_415653.1 82749912 3794578 176196..176639 1 NC_007622.1 hypothetical protein 176639 3794578 SAB0142 Staphylococcus aureus RF122 hypothetical protein YP_415653.1 176196 D 273036 CDS YP_415654.1 82749913 3794579 176651..177373 1 NC_007622.1 ABC transporter ATP-binding protein 177373 3794579 SAB0143 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415654.1 176651 D 273036 CDS YP_415655.1 82749914 3794581 179783..181261 1 NC_007622.1 peptide ABC transporter permease 181261 3794581 SAB0145 Staphylococcus aureus RF122 peptide ABC transporter permease YP_415655.1 179783 D 273036 CDS YP_415656.1 82749915 3794582 181267..182430 1 NC_007622.1 oligopeptide ABC transporter 182430 3794582 SAB0146 Staphylococcus aureus RF122 oligopeptide ABC transporter YP_415656.1 181267 D 273036 CDS YP_415657.1 82749916 3794583 182447..184222 1 NC_007622.1 RGD-containing lipoprotein 184222 3794583 SAB0147 Staphylococcus aureus RF122 RGD-containing lipoprotein YP_415657.1 182447 D 273036 CDS YP_415658.1 82749917 3794584 184260..186266 1 NC_007622.1 gamma-glutamyltransferase 186266 3794584 SAB0148 Staphylococcus aureus RF122 gamma-glutamyltransferase YP_415658.1 184260 D 273036 CDS YP_415659.2 161777622 3794585 complement(186804..187430) 1 NC_007622.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 187430 3794585 SAB0149c Staphylococcus aureus RF122 azoreductase YP_415659.2 186804 R 273036 CDS YP_415660.1 82749919 3794586 187639..188217 1 NC_007622.1 hypothetical protein 188217 3794586 SAB0150 Staphylococcus aureus RF122 hypothetical protein YP_415660.1 187639 D 273036 CDS YP_415661.1 82749920 3794587 188600..189697 1 NC_007622.1 multiple sugar-binding transport ATP-binding protein 189697 3794587 SAB0151 Staphylococcus aureus RF122 multiple sugar-binding transport ATP-binding protein YP_415661.1 188600 D 273036 CDS YP_415662.1 82749921 3794588 189710..190981 1 NC_007622.1 maltose/maltodextrin transport system protein 190981 3794588 SAB0152 Staphylococcus aureus RF122 maltose/maltodextrin transport system protein YP_415662.1 189710 D 273036 CDS YP_415663.1 82749922 3794589 190984..192252 1 NC_007622.1 maltose/maltodextrin transport permease protein 192252 3794589 SAB0153 Staphylococcus aureus RF122 maltose/maltodextrin transport permease protein YP_415663.1 190984 D 273036 CDS YP_415664.1 82749923 3794590 192254..193093 1 NC_007622.1 maltose/maltodextrin transport system protein 193093 3794590 SAB0154 Staphylococcus aureus RF122 maltose/maltodextrin transport system protein YP_415664.1 192254 D 273036 CDS YP_415665.1 82749924 3794591 193135..193392 1 NC_007622.1 hypothetical protein 193392 3794591 SAB0155 Staphylococcus aureus RF122 hypothetical protein YP_415665.1 193135 D 273036 CDS YP_415666.1 82749925 3794592 193451..194530 1 NC_007622.1 NADH-dependent dehydrogenase 194530 3794592 SAB0156 Staphylococcus aureus RF122 NADH-dependent dehydrogenase YP_415666.1 193451 D 273036 CDS YP_415667.1 82749926 3794593 194555..195595 1 NC_007622.1 NADH-dependent dehydrogenase 195595 3794593 SAB0157 Staphylococcus aureus RF122 NADH-dependent dehydrogenase YP_415667.1 194555 D 273036 CDS YP_415668.1 82749927 3794301 195650..196618 1 NC_007622.1 hypothetical protein 196618 3794301 SAB0158 Staphylococcus aureus RF122 hypothetical protein YP_415668.1 195650 D 273036 CDS YP_415669.1 82749928 3794302 complement(196979..197473) 1 NC_007622.1 hypothetical protein 197473 3794302 SAB0159c Staphylococcus aureus RF122 hypothetical protein YP_415669.1 196979 R 273036 CDS YP_415670.1 82749929 3795134 197706..199085 1 NC_007622.1 cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter 199085 uhpT 3795134 uhpT Staphylococcus aureus RF122 sugar phosphate antiporter YP_415670.1 197706 D 273036 CDS YP_415671.1 82749930 3794303 complement(199444..200202) 1 NC_007622.1 two-component response regulator 200202 3794303 SAB0161c Staphylococcus aureus RF122 two-component response regulator YP_415671.1 199444 R 273036 CDS YP_415672.1 82749931 3794304 complement(200195..201751) 1 NC_007622.1 two-component sensor histidine kinase 201751 3794304 SAB0162c Staphylococcus aureus RF122 two-component sensor histidine kinase YP_415672.1 200195 R 273036 CDS YP_415673.1 82749932 3794305 complement(201748..202716) 1 NC_007622.1 similar to S. epidermidis BitC protein; periplasmic iron binding protein 202716 3794305 SAB0163c Staphylococcus aureus RF122 periplasmic iron binding protein YP_415673.1 201748 R 273036 CDS YP_415674.1 82749933 3794306 203304..205553 1 NC_007622.1 formate acetyltransferase 205553 3794306 SAB0164 Staphylococcus aureus RF122 formate acetyltransferase YP_415674.1 203304 D 273036 CDS YP_415675.1 82749934 3794307 205576..206331 1 NC_007622.1 formate acetyltransferase activating enzyme 206331 3794307 SAB0165 Staphylococcus aureus RF122 formate acetyltransferase activating enzyme YP_415675.1 205576 D 273036 CDS YP_415676.1 82749935 3794308 206321..206629 1 NC_007622.1 hypothetical protein 206629 3794308 SAB0166 Staphylococcus aureus RF122 hypothetical protein YP_415676.1 206321 D 273036 CDS YP_415677.1 82749936 3794309 206667..208430 1 NC_007622.1 hypothetical protein 208430 3794309 SAB0167 Staphylococcus aureus RF122 hypothetical protein YP_415677.1 206667 D 273036 CDS YP_415678.1 82749937 3794310 complement(208595..208939) 1 NC_007622.1 hypothetical protein 208939 3794310 SAB0168c Staphylococcus aureus RF122 hypothetical protein YP_415678.1 208595 R 273036 CDS YP_415679.1 82749938 3794311 209129..211012 1 NC_007622.1 staphylocoagulase precursor 211012 3794311 SAB0169 Staphylococcus aureus RF122 staphylocoagulase precursor YP_415679.1 209129 D 273036 CDS YP_415680.1 82749939 3794312 complement(211599..212792) 1 NC_007622.1 3-ketoacyl-CoA transferase 212792 3794312 SAB0170c Staphylococcus aureus RF122 3-ketoacyl-CoA transferase YP_415680.1 211599 R 273036 CDS YP_415681.1 82749940 3794313 complement(212813..215074) 1 NC_007622.1 3-hydroxyacyl-CoA dehydrogenase 215074 3794313 SAB0171c Staphylococcus aureus RF122 3-hydroxyacyl-CoA dehydrogenase YP_415681.1 212813 R 273036 CDS YP_415682.1 82749941 3794314 complement(216583..218088) 1 NC_007622.1 acyl-CoA synthetase 218088 3794314 SAB0173c Staphylococcus aureus RF122 acyl-CoA synthetase YP_415682.1 216583 R 273036 CDS YP_415683.1 82749942 3794315 complement(218114..219694) 1 NC_007622.1 acetyl-CoA/acetoacetyl-CoA transferase 219694 3794315 SAB0174c Staphylococcus aureus RF122 acetyl-CoA/acetoacetyl-CoA transferase YP_415683.1 218114 R 273036 CDS YP_415684.1 82749943 3794316 220045..221274 1 NC_007622.1 hypothetical protein 221274 3794316 SAB0175 Staphylococcus aureus RF122 hypothetical protein YP_415684.1 220045 D 273036 CDS YP_415685.1 82749944 3794317 complement(221588..223063) 1 NC_007622.1 peptide ABC transporter 223063 3794317 SAB0176c Staphylococcus aureus RF122 peptide ABC transporter YP_415685.1 221588 R 273036 CDS YP_415686.1 82749945 3794318 complement(223261..223617) 1 NC_007622.1 hypothetical protein 223617 3794318 SAB0177c Staphylococcus aureus RF122 hypothetical protein YP_415686.1 223261 R 273036 CDS YP_415687.1 82749946 3794319 complement(223774..223947) 1 NC_007622.1 hypothetical protein 223947 3794319 SAB0178c Staphylococcus aureus RF122 hypothetical protein YP_415687.1 223774 R 273036 CDS YP_415688.1 82749947 3794320 complement(223973..225118) 1 NC_007622.1 flavohemoprotein 225118 3794320 SAB0179c Staphylococcus aureus RF122 flavohemoprotein YP_415688.1 223973 R 273036 CDS YP_415689.1 82749948 3793564 225690..226643 1 NC_007622.1 L-lactate dehydrogenase 226643 3793564 SAB0180 Staphylococcus aureus RF122 L-lactate dehydrogenase YP_415689.1 225690 D 273036 CDS YP_415690.1 82749949 3793565 complement(226964..228412) 1 NC_007622.1 phosphotransferase system enzyme II 228412 3793565 SAB0181c Staphylococcus aureus RF122 phosphotransferase system enzyme II YP_415690.1 226964 R 273036 CDS YP_415691.1 82749950 3793566 228854..229789 1 NC_007622.1 inosine-uridine preferring nucleoside hydrolase family protein 229789 3793566 SAB0182 Staphylococcus aureus RF122 inosine-uridine preferring nucleoside hydrolase family protein YP_415691.1 228854 D 273036 CDS YP_415692.1 82749951 3793568 232214..232681 1 NC_007622.1 phosphotransferase system enzyme 232681 3793568 SAB0184 Staphylococcus aureus RF122 phosphotransferase system enzyme YP_415692.1 232214 D 273036 CDS YP_415693.1 82749952 3793569 232704..232922 1 NC_007622.1 phosphotransferase system galactitol-specific enzyme II, B component 232922 3793569 SAB0185 Staphylococcus aureus RF122 phosphotransferase system galactitol-specific enzyme II, B component YP_415693.1 232704 D 273036 CDS YP_415694.1 82749953 3793570 233205..234464 1 NC_007622.1 phosphotransferase system galactitol-specific enzyme II, C component 234464 3793570 SAB0186 Staphylococcus aureus RF122 phosphotransferase system galactitol-specific enzyme II, C component YP_415694.1 233205 D 273036 CDS YP_415695.1 82749954 3793571 234482..235537 1 NC_007622.1 zinc-binding sorbitol dehydrogenase 235537 3793571 SAB0187 Staphylococcus aureus RF122 zinc-binding sorbitol dehydrogenase YP_415695.1 234482 D 273036 CDS YP_415696.1 82749955 3793572 235539..235685 1 NC_007622.1 hypothetical protein 235685 3793572 SAB0188 Staphylococcus aureus RF122 hypothetical protein YP_415696.1 235539 D 273036 CDS YP_415697.1 82749956 3793573 235709..236752 1 NC_007622.1 zinc-binding sorbitol dehydrogenase 236752 3793573 SAB0189 Staphylococcus aureus RF122 zinc-binding sorbitol dehydrogenase YP_415697.1 235709 D 273036 CDS YP_415698.1 82749957 3793574 237280..237996 1 NC_007622.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 237996 3793574 SAB0190 Staphylococcus aureus RF122 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_415698.1 237280 D 273036 CDS YP_415699.1 82749958 3793576 239037..240731 1 NC_007622.1 teichoic acid biosynthesis protein B 240731 3793576 SAB0192 Staphylococcus aureus RF122 teichoic acid biosynthesis protein B YP_415699.1 239037 D 273036 CDS YP_415700.1 82749959 3793577 241159..242328 1 NC_007622.1 teichoic acid biosynthesis protein F 242328 3793577 SAB0193 Staphylococcus aureus RF122 teichoic acid biosynthesis protein F YP_415700.1 241159 D 273036 CDS YP_415701.1 82749960 3793578 242604..243320 1 NC_007622.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 243320 ispD 3793578 ispD Staphylococcus aureus RF122 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_415701.1 242604 D 273036 CDS YP_415702.1 82749961 3793579 243313..244338 1 NC_007622.1 xylitol dehydrogenase 244338 3793579 SAB0195 Staphylococcus aureus RF122 xylitol dehydrogenase YP_415702.1 243313 D 273036 CDS YP_415703.1 82749962 3793580 244360..246048 1 NC_007622.1 teichoic acid biosynthesis protein B 246048 3793580 SAB0196 Staphylococcus aureus RF122 teichoic acid biosynthesis protein B YP_415703.1 244360 D 273036 CDS YP_415704.1 82749963 3793581 246081..247802 1 NC_007622.1 glycosyl transferase 247802 3793581 SAB0197 Staphylococcus aureus RF122 glycosyl transferase YP_415704.1 246081 D 273036 CDS YP_415705.1 82749964 3793177 247946..248620 1 NC_007622.1 involved in peptidoglycan cross-linking; cell wall biosynthesis protein ScdA 248620 scdA 3793177 scdA Staphylococcus aureus RF122 cell wall biosynthesis protein ScdA YP_415705.1 247946 D 273036 CDS YP_415706.1 82749965 3794767 248866..250620 1 NC_007622.1 two-component sensor histidine kinase 250620 lytS 3794767 lytS Staphylococcus aureus RF122 two-component sensor histidine kinase YP_415706.1 248866 D 273036 CDS YP_415707.1 82749966 3794766 250623..251363 1 NC_007622.1 two-component response regulator 251363 lytR 3794766 lytR Staphylococcus aureus RF122 two-component response regulator YP_415707.1 250623 D 273036 CDS YP_415708.1 82749967 3794755 251476..251919 1 NC_007622.1 negatively regulates murein hydrolase activity; murein hydrolase regulator LrgA 251919 lrgA 3794755 lrgA Staphylococcus aureus RF122 murein hydrolase regulator LrgA YP_415708.1 251476 D 273036 CDS YP_415709.1 82749968 3794756 251912..252613 1 NC_007622.1 in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases; antiholin-like protein LrgB 252613 lrgB 3794756 lrgB Staphylococcus aureus RF122 antiholin-like protein LrgB YP_415709.1 251912 D 273036 CDS YP_415710.1 82749969 3793582 complement(252721..253425) 1 NC_007622.1 GntR family transcriptional regulator 253425 3793582 SAB0203c Staphylococcus aureus RF122 GntR family transcriptional regulator YP_415710.1 252721 R 273036 CDS YP_415711.1 82749970 3793328 253574..254365 1 NC_007622.1 PTS system transport protein 254365 3793328 SAB0204 Staphylococcus aureus RF122 PTS system transport protein YP_415711.1 253574 D 273036 CDS YP_415712.1 82749971 3792658 254405..255817 1 NC_007622.1 6-phospho-beta-glucosidase 255817 bglA 3792658 bglA Staphylococcus aureus RF122 6-phospho-beta-glucosidase YP_415712.1 254405 D 273036 CDS YP_415713.1 82749972 3793329 255881..256174 1 NC_007622.1 hypothetical protein 256174 3793329 SAB0206 Staphylococcus aureus RF122 hypothetical protein YP_415713.1 255881 D 273036 CDS YP_415714.1 82749973 3793330 complement(256336..257097) 1 NC_007622.1 hypothetical protein 257097 3793330 SAB0207c Staphylococcus aureus RF122 hypothetical protein YP_415714.1 256336 R 273036 CDS YP_415715.1 82749974 3793331 complement(257347..258261) 1 NC_007622.1 ribokinase 258261 3793331 SAB0208c Staphylococcus aureus RF122 ribokinase YP_415715.1 257347 R 273036 CDS YP_415716.1 82749975 3793332 complement(258289..258693) 1 NC_007622.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 258693 3793332 SAB0209c Staphylococcus aureus RF122 D-ribose pyranase YP_415716.1 258289 R 273036 CDS YP_415717.1 82749976 3793333 complement(258708..259589) 1 NC_007622.1 ribose transporter 259589 3793333 SAB0210c Staphylococcus aureus RF122 ribose transporter YP_415717.1 258708 R 273036 CDS YP_415718.1 82749977 3793334 complement(259821..260819) 1 NC_007622.1 ribose operon transcriptional regulator 260819 3793334 SAB0211c Staphylococcus aureus RF122 ribose operon transcriptional regulator YP_415718.1 259821 R 273036 CDS YP_415719.1 82749978 3793335 261200..261589 1 NC_007622.1 hypothetical protein 261589 3793335 SAB0212 Staphylococcus aureus RF122 hypothetical protein YP_415719.1 261200 D 273036 CDS YP_415720.1 82749979 3793336 complement(261718..263094) 1 NC_007622.1 membrane transporter 263094 3793336 SAB0213c Staphylococcus aureus RF122 membrane transporter YP_415720.1 261718 R 273036 CDS YP_415721.1 82749980 3793337 263328..264320 1 NC_007622.1 penicillin-related choloylglycine hydrolase 264320 3793337 SAB0214 Staphylococcus aureus RF122 penicillin-related choloylglycine hydrolase YP_415721.1 263328 D 273036 CDS YP_415722.1 82749981 3794765 264640..265590 1 NC_007622.1 peptidoglycan hydrolase 265590 lytM 3794765 lytM Staphylococcus aureus RF122 peptidoglycan hydrolase YP_415722.1 264640 D 273036 CDS YP_415723.1 82749982 3793338 complement(265642..266301) 1 NC_007622.1 ABC transporter ATP-binding protein 266301 3793338 SAB0216c Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415723.1 265642 R 273036 CDS YP_415724.1 82749983 3793339 complement(266315..267235) 1 NC_007622.1 hypothetical protein 267235 3793339 SAB0217c Staphylococcus aureus RF122 hypothetical protein YP_415724.1 266315 R 273036 CDS YP_415725.1 82749984 3793340 complement(267232..268398) 1 NC_007622.1 hypothetical protein 268398 3793340 SAB0218c Staphylococcus aureus RF122 hypothetical protein YP_415725.1 267232 R 273036 CDS YP_415726.1 82749985 3793341 complement(268466..269989) 1 NC_007622.1 hypothetical protein 269989 3793341 SAB0219c Staphylococcus aureus RF122 hypothetical protein YP_415726.1 268466 R 273036 CDS YP_415727.1 82749986 3793342 270492..270911 1 NC_007622.1 hypothetical protein 270911 3793342 SAB0220 Staphylococcus aureus RF122 hypothetical protein YP_415727.1 270492 D 273036 CDS YP_415728.1 82749987 3793343 270945..271547 1 NC_007622.1 hypothetical protein 271547 3793343 SAB0221 Staphylococcus aureus RF122 hypothetical protein YP_415728.1 270945 D 273036 CDS YP_415729.1 82749988 3793345 272817..273110 1 NC_007622.1 hypothetical protein 273110 3793345 SAB0223 Staphylococcus aureus RF122 hypothetical protein YP_415729.1 272817 D 273036 CDS YP_415730.1 82749989 3793346 273193..276222 1 NC_007622.1 hypothetical protein 276222 3793346 SAB0224 Staphylococcus aureus RF122 hypothetical protein YP_415730.1 273193 D 273036 CDS YP_415731.1 82749990 3792746 276651..276893 1 NC_007622.1 hypothetical protein 276893 3792746 SAB0226 Staphylococcus aureus RF122 hypothetical protein YP_415731.1 276651 D 273036 CDS YP_415732.1 82749991 3792747 276906..278240 1 NC_007622.1 hypothetical protein 278240 3792747 SAB0227 Staphylococcus aureus RF122 hypothetical protein YP_415732.1 276906 D 273036 CDS YP_415733.1 82749992 3792748 278262..282701 1 NC_007622.1 DNA segregation ATPase and related protein 282701 3792748 SAB0228 Staphylococcus aureus RF122 DNA segregation ATPase and related protein YP_415733.1 278262 D 273036 CDS YP_415734.1 82749993 3792749 282731..283123 1 NC_007622.1 hypothetical protein 283123 3792749 SAB0229 Staphylococcus aureus RF122 hypothetical protein YP_415734.1 282731 D 273036 CDS YP_415735.1 82749994 3792750 283139..283453 1 NC_007622.1 hypothetical protein 283453 3792750 SAB0230 Staphylococcus aureus RF122 hypothetical protein YP_415735.1 283139 D 273036 CDS YP_415736.1 82749995 3792751 283450..284127 1 NC_007622.1 hypothetical protein 284127 3792751 SAB0231 Staphylococcus aureus RF122 hypothetical protein YP_415736.1 283450 D 273036 CDS YP_415737.1 82749996 3792752 284127..284444 1 NC_007622.1 hypothetical protein 284444 3792752 SAB0232 Staphylococcus aureus RF122 hypothetical protein YP_415737.1 284127 D 273036 CDS YP_415738.1 82749997 3792754 286309..286800 1 NC_007622.1 hypothetical protein 286800 3792754 SAB0234 Staphylococcus aureus RF122 hypothetical protein YP_415738.1 286309 D 273036 CDS YP_415739.1 82749998 3792755 287002..287685 1 NC_007622.1 hypothetical protein 287685 3792755 SAB0235 Staphylococcus aureus RF122 hypothetical protein YP_415739.1 287002 D 273036 CDS YP_415740.1 82749999 3792756 287954..288442 1 NC_007622.1 hypothetical protein 288442 3792756 SAB0236 Staphylococcus aureus RF122 hypothetical protein YP_415740.1 287954 D 273036 CDS YP_415741.1 82750000 3792757 288660..289160 1 NC_007622.1 hypothetical protein 289160 3792757 SAB0237 Staphylococcus aureus RF122 hypothetical protein YP_415741.1 288660 D 273036 CDS YP_415742.1 82750001 3792758 289171..289671 1 NC_007622.1 hypothetical protein 289671 3792758 SAB0238 Staphylococcus aureus RF122 hypothetical protein YP_415742.1 289171 D 273036 CDS YP_415743.2 229307090 3792759 289682..290170 1 NC_007622.1 hypothetical protein 290170 3792759 SAB0239 Staphylococcus aureus RF122 hypothetical protein YP_415743.2 289682 D 273036 CDS YP_415744.1 82750003 3792760 290773..291150 1 NC_007622.1 hypothetical protein 291150 3792760 SAB0240 Staphylococcus aureus RF122 hypothetical protein YP_415744.1 290773 D 273036 CDS YP_415745.1 82750004 3792761 291321..291695 1 NC_007622.1 hypothetical protein 291695 3792761 SAB0241 Staphylococcus aureus RF122 hypothetical protein YP_415745.1 291321 D 273036 CDS YP_415746.1 82750005 3792762 complement(291949..292770) 1 NC_007622.1 formate/nitrate transporter 292770 3792762 SAB0242c Staphylococcus aureus RF122 formate/nitrate transporter YP_415746.1 291949 R 273036 CDS YP_415747.1 82750006 3792763 complement(293009..294316) 1 NC_007622.1 branched chain amino acid ABC transporter carrier protein 294316 3792763 SAB0243c Staphylococcus aureus RF122 branched chain amino acid ABC transporter carrier protein YP_415747.1 293009 R 273036 CDS YP_415748.1 82750007 3792764 294899..295789 1 NC_007622.1 hypothetical protein 295789 3792764 SAB0244 Staphylococcus aureus RF122 hypothetical protein YP_415748.1 294899 D 273036 CDS YP_415749.1 82750008 3794515 296038..297087 1 NC_007622.1 ABC transporter permease 297087 3794515 SAB0245 Staphylococcus aureus RF122 ABC transporter permease YP_415749.1 296038 D 273036 CDS YP_415750.1 82750009 3794516 297100..297777 1 NC_007622.1 ABC transporter ATP-binding protein 297777 3794516 SAB0246 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415750.1 297100 D 273036 CDS YP_415751.1 82750010 3794517 297979..299016 1 NC_007622.1 perfringolysin O regulatory protein 299016 3794517 SAB0247 Staphylococcus aureus RF122 perfringolysin O regulatory protein YP_415751.1 297979 D 273036 CDS YP_415752.1 82750011 3794518 299359..300477 1 NC_007622.1 carbohydrate kinase 300477 3794518 SAB0248 Staphylococcus aureus RF122 carbohydrate kinase YP_415752.1 299359 D 273036 CDS YP_415753.1 82750012 3794519 300452..301375 1 NC_007622.1 hypothetical protein 301375 3794519 SAB0249 Staphylococcus aureus RF122 hypothetical protein YP_415753.1 300452 D 273036 CDS YP_415754.1 82750013 3794520 301386..302606 1 NC_007622.1 nucleoside transporter permease 302606 3794520 SAB0250 Staphylococcus aureus RF122 nucleoside transporter permease YP_415754.1 301386 D 273036 CDS YP_415755.1 82750014 3794521 complement(302711..304243) 1 NC_007622.1 transport protein 304243 3794521 SAB0251c Staphylococcus aureus RF122 transport protein YP_415755.1 302711 R 273036 CDS YP_415756.1 82750015 3794522 complement(304283..305164) 1 NC_007622.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase 305164 3794522 SAB0252c Staphylococcus aureus RF122 N-acetylneuraminate lyase YP_415756.1 304283 R 273036 CDS YP_415757.1 82750016 3794523 305281..306183 1 NC_007622.1 kinase 306183 3794523 SAB0253 Staphylococcus aureus RF122 kinase YP_415757.1 305281 D 273036 CDS YP_415758.1 82750017 3794524 complement(306460..307260) 1 NC_007622.1 hypothetical protein 307260 3794524 SAB0254c Staphylococcus aureus RF122 hypothetical protein YP_415758.1 306460 R 273036 CDS YP_415759.1 82750018 3794525 307400..308068 1 NC_007622.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 308068 3794525 SAB0255 Staphylococcus aureus RF122 N-acetylmannosamine-6-phosphate 2-epimerase YP_415759.1 307400 D 273036 CDS YP_415760.1 82750019 3794526 complement(308198..309559) 1 NC_007622.1 hypothetical protein 309559 3794526 SAB0256c Staphylococcus aureus RF122 hypothetical protein YP_415760.1 308198 R 273036 CDS YP_415761.1 82750020 3794358 309929..311887 1 NC_007622.1 glycerol ester hydrolase 311887 geh 3794358 geh Staphylococcus aureus RF122 glycerol ester hydrolase YP_415761.1 309929 D 273036 CDS YP_415762.1 82750021 3794527 complement(311957..313162) 1 NC_007622.1 phage-related integrase 313162 3794527 SAB0258c Staphylococcus aureus RF122 phage-related integrase YP_415762.1 311957 R 273036 CDS YP_415763.1 82750022 3794528 complement(313262..313915) 1 NC_007622.1 hypothetical protein 313915 3794528 SAB0259c Staphylococcus aureus RF122 hypothetical protein YP_415763.1 313262 R 273036 CDS YP_415764.1 82750023 3794529 314357..314611 1 NC_007622.1 phage-like protein 314611 3794529 SAB0260 Staphylococcus aureus RF122 phage-like protein YP_415764.1 314357 D 273036 CDS YP_415765.1 82750024 3794530 314611..316077 1 NC_007622.1 phage-like protein 316077 3794530 SAB0261 Staphylococcus aureus RF122 phage-like protein YP_415765.1 314611 D 273036 CDS YP_415766.1 82750025 3794531 316077..316466 1 NC_007622.1 phage-like protein 316466 3794531 SAB0262 Staphylococcus aureus RF122 phage-like protein YP_415766.1 316077 D 273036 CDS YP_415767.1 82750026 3794532 316459..316623 1 NC_007622.1 phage-like protein 316623 3794532 SAB0263 Staphylococcus aureus RF122 phage-like protein YP_415767.1 316459 D 273036 CDS YP_415768.1 82750027 3794533 316669..316968 1 NC_007622.1 phage-like protein 316968 3794533 SAB0264 Staphylococcus aureus RF122 phage-like protein YP_415768.1 316669 D 273036 CDS YP_415769.1 82750028 3794534 317562..318794 1 NC_007622.1 type-I specificity determinant subunit 318794 3794534 SAB0265 Staphylococcus aureus RF122 type-I specificity determinant subunit YP_415769.1 317562 D 273036 CDS YP_415770.1 82750029 3792668 318846..319148 1 NC_007622.1 phage-related holin 319148 3792668 SAB0266 Staphylococcus aureus RF122 phage-related holin YP_415770.1 318846 D 273036 CDS YP_415771.1 82750030 3792670 320847..321056 1 NC_007622.1 hypothetical protein 321056 3792670 SAB0268 Staphylococcus aureus RF122 hypothetical protein YP_415771.1 320847 D 273036 CDS YP_415772.1 82750031 3792671 321668..322255 1 NC_007622.1 hypothetical protein 322255 3792671 SAB0269 Staphylococcus aureus RF122 hypothetical protein YP_415772.1 321668 D 273036 CDS YP_415773.1 82750032 3792672 322252..322707 1 NC_007622.1 hypothetical protein 322707 3792672 SAB0270 Staphylococcus aureus RF122 hypothetical protein YP_415773.1 322252 D 273036 CDS YP_415774.1 82750033 3792673 complement(323332..324159) 1 NC_007622.1 hypothetical protein 324159 3792673 SAB0271c Staphylococcus aureus RF122 hypothetical protein YP_415774.1 323332 R 273036 CDS YP_415775.1 82750034 3792674 complement(324232..325431) 1 NC_007622.1 trimethylamine dehydrogenase 325431 3792674 SAB0272c Staphylococcus aureus RF122 trimethylamine dehydrogenase YP_415775.1 324232 R 273036 CDS YP_415776.1 82750035 3792675 325733..326734 1 NC_007622.1 luciferase family protein 326734 3792675 SAB0273 Staphylococcus aureus RF122 luciferase family protein YP_415776.1 325733 D 273036 CDS YP_415777.1 82750036 3792676 326768..327100 1 NC_007622.1 glycine cleavage system H protein 327100 3792676 SAB0274 Staphylococcus aureus RF122 glycine cleavage system H protein YP_415777.1 326768 D 273036 CDS YP_415778.1 82750037 3792677 327101..327901 1 NC_007622.1 hypothetical protein 327901 3792677 SAB0275 Staphylococcus aureus RF122 hypothetical protein YP_415778.1 327101 D 273036 CDS YP_415779.1 82750038 3792678 327888..328835 1 NC_007622.1 hypothetical protein 328835 3792678 SAB0276 Staphylococcus aureus RF122 hypothetical protein YP_415779.1 327888 D 273036 CDS YP_415780.1 82750039 3792679 328813..329835 1 NC_007622.1 lipoate-protein ligase 329835 3792679 SAB0277 Staphylococcus aureus RF122 lipoate-protein ligase YP_415780.1 328813 D 273036 CDS YP_415781.1 82750040 3792680 complement(329979..331325) 1 NC_007622.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 331325 ulaA 3792680 ulaA Staphylococcus aureus RF122 PTS system ascorbate-specific transporter subunit IIC YP_415781.1 329979 R 273036 CDS YP_415782.1 82750041 3792681 complement(331340..331624) 1 NC_007622.1 PTS system component 331624 3792681 SAB0279c Staphylococcus aureus RF122 PTS system component YP_415782.1 331340 R 273036 CDS YP_415783.1 82750042 3792682 complement(331626..332069) 1 NC_007622.1 PTS system component 332069 3792682 SAB0280c Staphylococcus aureus RF122 PTS system component YP_415783.1 331626 R 273036 CDS YP_415784.1 82750043 3792683 complement(332074..334029) 1 NC_007622.1 PTS system regulator 334029 3792683 SAB0281c Staphylococcus aureus RF122 PTS system regulator YP_415784.1 332074 R 273036 CDS YP_415785.1 82750044 3792684 complement(334016..334237) 1 NC_007622.1 hypothetical protein 334237 3792684 SAB0282c Staphylococcus aureus RF122 hypothetical protein YP_415785.1 334016 R 273036 CDS YP_415786.1 82750045 3792685 334241..334660 1 NC_007622.1 MarR family regulatory protein 334660 3792685 SAB0283 Staphylococcus aureus RF122 MarR family regulatory protein YP_415786.1 334241 D 273036 CDS YP_415787.1 82750046 3792686 334767..336122 1 NC_007622.1 hypothetical protein 336122 3792686 SAB0284 Staphylococcus aureus RF122 hypothetical protein YP_415787.1 334767 D 273036 CDS YP_415788.1 82750047 3793524 336229..336669 1 NC_007622.1 hypothetical protein 336669 3793524 SAB0285 Staphylococcus aureus RF122 hypothetical protein YP_415788.1 336229 D 273036 CDS YP_415789.1 82750048 3793525 complement(336753..338111) 1 NC_007622.1 glycerol-3-phosphate transporter 338111 3793525 SAB0286c Staphylococcus aureus RF122 glycerol-3-phosphate transporter YP_415789.1 336753 R 273036 CDS YP_415790.1 82750049 3793526 338423..339349 1 NC_007622.1 glyoxylase family protein 339349 3793526 SAB0287 Staphylococcus aureus RF122 glyoxylase family protein YP_415790.1 338423 D 273036 CDS YP_415791.1 82750050 3793527 339363..340424 1 NC_007622.1 luciferase-like monooxygenase 340424 3793527 SAB0288 Staphylococcus aureus RF122 luciferase-like monooxygenase YP_415791.1 339363 D 273036 CDS YP_415792.1 82750051 3793528 340438..341004 1 NC_007622.1 NADH-dependent FMN reductase 341004 3793528 SAB0289 Staphylococcus aureus RF122 NADH-dependent FMN reductase YP_415792.1 340438 D 273036 CDS YP_415793.1 82750052 3793529 complement(341064..342059) 1 NC_007622.1 hypothetical protein 342059 3793529 SAB0290c Staphylococcus aureus RF122 hypothetical protein YP_415793.1 341064 R 273036 CDS YP_415794.1 82750053 3793530 342058..342351 1 NC_007622.1 hypothetical protein 342351 3793530 SAB0291 Staphylococcus aureus RF122 hypothetical protein YP_415794.1 342058 D 273036 CDS YP_415795.1 82750054 3793531 342364..342909 1 NC_007622.1 serine N-acetyltransferase 342909 3793531 SAB0292 Staphylococcus aureus RF122 serine N-acetyltransferase YP_415795.1 342364 D 273036 CDS YP_415796.1 82750055 3793532 343174..344028 1 NC_007622.1 lipoprotein 344028 3793532 SAB0293 Staphylococcus aureus RF122 lipoprotein YP_415796.1 343174 D 273036 CDS YP_415797.1 82750056 3793534 345235..346947 1 NC_007622.1 hypothetical protein 346947 3793534 SAB0295 Staphylococcus aureus RF122 hypothetical protein YP_415797.1 345235 D 273036 CDS YP_415798.1 82750057 3793535 complement(347196..347897) 1 NC_007622.1 sec-independent protein translocase protein 347897 3793535 SAB0296c Staphylococcus aureus RF122 sec-independent protein translocase protein YP_415798.1 347196 R 273036 CDS YP_415799.1 82750058 3793536 complement(347914..348129) 1 NC_007622.1 protein translocase subunit 348129 3793536 SAB0297c Staphylococcus aureus RF122 protein translocase subunit YP_415799.1 347914 R 273036 CDS YP_415800.1 82750059 3793537 complement(348237..348626) 1 NC_007622.1 hypothetical protein 348626 3793537 SAB0298c Staphylococcus aureus RF122 hypothetical protein YP_415800.1 348237 R 273036 CDS YP_415801.1 82750060 3793538 348866..349069 1 NC_007622.1 DNA-binding protein 349069 3793538 SAB0299 Staphylococcus aureus RF122 DNA-binding protein YP_415801.1 348866 D 273036 CDS YP_415802.1 82750061 3793539 349066..349779 1 NC_007622.1 hypothetical protein 349779 3793539 SAB0300 Staphylococcus aureus RF122 hypothetical protein YP_415802.1 349066 D 273036 CDS YP_415803.1 82750062 3793540 349804..350646 1 NC_007622.1 ABC transporter ATP-binding protein 350646 3793540 SAB0301 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415803.1 349804 D 273036 CDS YP_415804.1 82750063 3793541 350646..351275 1 NC_007622.1 hypothetical protein 351275 3793541 SAB0302 Staphylococcus aureus RF122 hypothetical protein YP_415804.1 350646 D 273036 CDS YP_415805.1 82750064 3793542 complement(351665..352798) 1 NC_007622.1 hypothetical protein 352798 3793542 SAB0303c Staphylococcus aureus RF122 hypothetical protein YP_415805.1 351665 R 273036 CDS YP_415806.1 82750065 3794322 353336..354517 1 NC_007622.1 acetyl-CoA acetyltransferase protein 354517 th1 3794322 th1 Staphylococcus aureus RF122 acetyl-CoA acetyltransferase protein YP_415806.1 353336 D 273036 CDS YP_415807.1 82750066 3793543 complement(354600..355352) 1 NC_007622.1 hypothetical protein 355352 3793543 SAB0305c Staphylococcus aureus RF122 hypothetical protein YP_415807.1 354600 R 273036 CDS YP_415808.1 82750067 3792978 complement(355395..357623) 1 NC_007622.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 357623 metE1 3792978 metE1 Staphylococcus aureus RF122 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_415808.1 355395 R 273036 CDS YP_415809.1 82750068 3792979 complement(357620..359461) 1 NC_007622.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein 359461 metE2 3792979 metE2 Staphylococcus aureus RF122 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein YP_415809.1 357620 R 273036 CDS YP_415810.1 82750069 3794242 complement(359430..360590) 1 NC_007622.1 cystathionine beta-lyase 360590 3794242 SAB0308c Staphylococcus aureus RF122 cystathionine beta-lyase YP_415810.1 359430 R 273036 CDS YP_415811.1 82750070 3794243 complement(360587..361690) 1 NC_007622.1 cystathionine gamma-synthase 361690 3794243 SAB0309c Staphylococcus aureus RF122 cystathionine gamma-synthase YP_415811.1 360587 R 273036 CDS YP_415812.1 82750071 3794244 361898..362236 1 NC_007622.1 hypothetical protein 362236 3794244 SAB0310 Staphylococcus aureus RF122 hypothetical protein YP_415812.1 361898 D 273036 CDS YP_415813.1 82750072 3794245 362354..363199 1 NC_007622.1 hypothetical protein 363199 3794245 SAB0311 Staphylococcus aureus RF122 hypothetical protein YP_415813.1 362354 D 273036 CDS YP_415814.1 82750073 3794246 363353..364234 1 NC_007622.1 hypothetical protein 364234 3794246 SAB0312 Staphylococcus aureus RF122 hypothetical protein YP_415814.1 363353 D 273036 CDS YP_415815.1 82750074 3794247 364264..364467 1 NC_007622.1 hypothetical protein 364467 3794247 SAB0313 Staphylococcus aureus RF122 hypothetical protein YP_415815.1 364264 D 273036 CDS YP_415816.1 82750075 3794248 364479..365576 1 NC_007622.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 365576 3794248 SAB0314 Staphylococcus aureus RF122 GTP-dependent nucleic acid-binding protein EngD YP_415816.1 364479 D 273036 CDS YP_415817.1 82750076 3794249 complement(365662..365853) 1 NC_007622.1 hypothetical protein 365853 3794249 SAB0315c Staphylococcus aureus RF122 hypothetical protein YP_415817.1 365662 R 273036 CDS YP_415818.1 82750077 3792937 366097..366393 1 NC_007622.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 366393 rpsF 3792937 rpsF Staphylococcus aureus RF122 30S ribosomal protein S6 YP_415818.1 366097 D 273036 CDS YP_415819.1 82750078 3793015 366414..366917 1 NC_007622.1 single-strand DNA-binding protein 366917 ssb 3793015 ssb Staphylococcus aureus RF122 single-strand DNA-binding protein YP_415819.1 366414 D 273036 CDS YP_415820.1 82750079 3794994 366969..367211 1 NC_007622.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 367211 rpsR 3794994 rpsR Staphylococcus aureus RF122 30S ribosomal protein S18 YP_415820.1 366969 D 273036 CDS YP_415821.1 82750080 3794250 complement(367487..368479) 1 NC_007622.1 hypothetical protein 368479 3794250 SAB0319c Staphylococcus aureus RF122 hypothetical protein YP_415821.1 367487 R 273036 CDS YP_415823.1 82750082 3794252 369384..369995 1 NC_007622.1 hypothetical protein 369995 3794252 SAB0321 Staphylococcus aureus RF122 hypothetical protein YP_415823.1 369384 D 273036 CDS YP_415824.1 82750083 3794253 370364..370732 1 NC_007622.1 hypothetical protein 370732 3794253 SAB0322 Staphylococcus aureus RF122 hypothetical protein YP_415824.1 370364 D 273036 CDS YP_415825.1 82750084 3794254 370912..371484 1 NC_007622.1 hypothetical protein 371484 3794254 SAB0323 Staphylococcus aureus RF122 hypothetical protein YP_415825.1 370912 D 273036 CDS YP_415826.1 82750085 3794255 complement(371622..371885) 1 NC_007622.1 hypothetical protein 371885 3794255 SAB0324c Staphylococcus aureus RF122 hypothetical protein YP_415826.1 371622 R 273036 CDS YP_415827.1 82750086 3794256 372178..372432 1 NC_007622.1 hypothetical protein 372432 3794256 SAB0325 Staphylococcus aureus RF122 hypothetical protein YP_415827.1 372178 D 273036 CDS YP_415828.1 82750087 3794257 372858..373439 1 NC_007622.1 hypothetical protein 373439 3794257 SAB0326 Staphylococcus aureus RF122 hypothetical protein YP_415828.1 372858 D 273036 CDS YP_415829.1 82750088 3794258 complement(373505..373897) 1 NC_007622.1 hypothetical protein 373897 3794258 SAB0327c Staphylococcus aureus RF122 hypothetical protein YP_415829.1 373505 R 273036 CDS YP_415830.1 82750089 3794259 complement(374157..374783) 1 NC_007622.1 hypothetical protein 374783 3794259 SAB0328c Staphylococcus aureus RF122 hypothetical protein YP_415830.1 374157 R 273036 CDS YP_415831.1 82750090 3794260 complement(374855..375148) 1 NC_007622.1 hypothetical protein 375148 3794260 SAB0329c Staphylococcus aureus RF122 hypothetical protein YP_415831.1 374855 R 273036 CDS YP_415832.1 82750091 3794893 complement(375227..376750) 1 NC_007622.1 alkyl hydroperoxide reductase subunit F 376750 ahpF 3794893 ahpF Staphylococcus aureus RF122 alkyl hydroperoxide reductase subunit F YP_415832.1 375227 R 273036 CDS YP_415833.1 82750092 3794892 complement(376766..377335) 1 NC_007622.1 alkyl hydroperoxide reductase subunit C 377335 ahpC 3794892 ahpC Staphylococcus aureus RF122 alkyl hydroperoxide reductase subunit C YP_415833.1 376766 R 273036 CDS YP_415834.1 82750093 3795197 377827..378582 1 NC_007622.1 nitro/flavin reductase 378582 3795197 SAB0332 Staphylococcus aureus RF122 nitro/flavin reductase YP_415834.1 377827 D 273036 CDS YP_415835.1 82750094 3795198 complement(378662..380050) 1 NC_007622.1 proton/sodium-glutamate symport protein 380050 3795198 SAB0333c Staphylococcus aureus RF122 proton/sodium-glutamate symport protein YP_415835.1 378662 R 273036 CDS YP_415836.1 82750095 3795199 complement(380315..380692) 1 NC_007622.1 hypothetical protein 380692 3795199 SAB0334c Staphylococcus aureus RF122 hypothetical protein YP_415836.1 380315 R 273036 CDS YP_415837.1 82750096 3795200 complement(381031..381987) 1 NC_007622.1 hypothetical protein 381987 3795200 SAB0335c Staphylococcus aureus RF122 hypothetical protein YP_415837.1 381031 R 273036 CDS YP_415838.1 82750097 3795201 complement(382105..382767) 1 NC_007622.1 hypothetical protein 382767 3795201 SAB0336c Staphylococcus aureus RF122 hypothetical protein YP_415838.1 382105 R 273036 CDS YP_415839.1 82750098 3795202 complement(382910..383317) 1 NC_007622.1 hypothetical protein 383317 3795202 SAB0337c Staphylococcus aureus RF122 hypothetical protein YP_415839.1 382910 R 273036 CDS YP_415840.1 82750099 3794177 383830..384408 1 NC_007622.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 384408 xpt 3794177 xpt Staphylococcus aureus RF122 xanthine phosphoribosyltransferase YP_415840.1 383830 D 273036 CDS YP_415841.1 82750100 3794121 384408..385676 1 NC_007622.1 xanthine permease 385676 pbuX 3794121 pbuX Staphylococcus aureus RF122 xanthine permease YP_415841.1 384408 D 273036 CDS YP_415842.1 82750101 3794238 385714..387180 1 NC_007622.1 inositol-monophosphate dehydrogenase 387180 guaB 3794238 guaB Staphylococcus aureus RF122 inositol-monophosphate dehydrogenase YP_415842.1 385714 D 273036 CDS YP_415843.1 82750102 3794237 387205..388746 1 NC_007622.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 388746 guaA 3794237 guaA Staphylococcus aureus RF122 GMP synthase YP_415843.1 387205 D 273036 CDS YP_415844.1 82750103 3795203 complement(388840..389976) 1 NC_007622.1 integrase 389976 3795203 SAB0342c Staphylococcus aureus RF122 integrase YP_415844.1 388840 R 273036 CDS YP_415845.1 82750104 3795204 complement(390060..390845) 1 NC_007622.1 pathogenicity island protein 390845 3795204 SAB0343c Staphylococcus aureus RF122 pathogenicity island protein YP_415845.1 390060 R 273036 CDS YP_415846.1 82750105 3795205 390962..391189 1 NC_007622.1 pathogenicity island protein 391189 3795205 SAB0344 Staphylococcus aureus RF122 pathogenicity island protein YP_415846.1 390962 D 273036 CDS YP_415847.1 82750106 3795206 391235..391495 1 NC_007622.1 pathogenicity island protein 391495 3795206 SAB0345 Staphylococcus aureus RF122 pathogenicity island protein YP_415847.1 391235 D 273036 CDS YP_415848.1 82750107 3795207 391542..391697 1 NC_007622.1 pathogenicity island protein 391697 3795207 SAB0346 Staphylococcus aureus RF122 pathogenicity island protein YP_415848.1 391542 D 273036 CDS YP_415849.1 82750108 3795208 391682..391885 1 NC_007622.1 pathogenicity island protein 391885 3795208 SAB0347 Staphylococcus aureus RF122 pathogenicity island protein YP_415849.1 391682 D 273036 CDS YP_415850.1 82750109 3795209 391887..392270 1 NC_007622.1 pathogenicity island protein 392270 3795209 SAB0348 Staphylococcus aureus RF122 pathogenicity island protein YP_415850.1 391887 D 273036 CDS YP_415851.1 82750110 3795210 392271..392588 1 NC_007622.1 pathogenicity island protein 392588 3795210 SAB0349 Staphylococcus aureus RF122 pathogenicity island protein YP_415851.1 392271 D 273036 CDS YP_415852.1 82750111 3795211 392652..393521 1 NC_007622.1 pathogenicity island protein 393521 3795211 SAB0350 Staphylococcus aureus RF122 pathogenicity island protein YP_415852.1 392652 D 273036 CDS YP_415853.1 82750112 3795212 393535..395244 1 NC_007622.1 pathogenicity island protein 395244 3795212 SAB0351 Staphylococcus aureus RF122 pathogenicity island protein YP_415853.1 393535 D 273036 CDS YP_415854.1 82750113 3795213 395575..395955 1 NC_007622.1 pathogenicity island protein 395955 3795213 SAB0352 Staphylococcus aureus RF122 pathogenicity island protein YP_415854.1 395575 D 273036 CDS YP_415855.1 82750114 3795214 395952..396593 1 NC_007622.1 pathogenicity island protein 396593 3795214 SAB0353 Staphylococcus aureus RF122 pathogenicity island protein YP_415855.1 395952 D 273036 CDS YP_415856.1 82750115 3795215 396940..397281 1 NC_007622.1 pathogenicity island protein 397281 3795215 SAB0354 Staphylococcus aureus RF122 pathogenicity island protein YP_415856.1 396940 D 273036 CDS YP_415857.1 82750116 3795216 397293..397871 1 NC_007622.1 pathogenicity island protein 397871 3795216 SAB0355 Staphylococcus aureus RF122 pathogenicity island protein YP_415857.1 397293 D 273036 CDS YP_415858.1 82750117 3793113 397889..398107 1 NC_007622.1 pathogenicity island protein 398107 3793113 SAB0356 Staphylococcus aureus RF122 pathogenicity island protein YP_415858.1 397889 D 273036 CDS YP_415859.1 82750118 3793114 398110..398685 1 NC_007622.1 pathogenicity island protein 398685 3793114 SAB0357 Staphylococcus aureus RF122 pathogenicity island protein YP_415859.1 398110 D 273036 CDS YP_415860.1 82750119 3793115 398688..399029 1 NC_007622.1 pathogenicity island protein 399029 3793115 SAB0358 Staphylococcus aureus RF122 pathogenicity island protein YP_415860.1 398688 D 273036 CDS YP_415861.1 82750120 3793116 399026..399595 1 NC_007622.1 pathogenicity island protein 399595 3793116 SAB0359 Staphylococcus aureus RF122 pathogenicity island protein YP_415861.1 399026 D 273036 CDS YP_415862.1 82750121 3795130 complement(399750..400454) 1 NC_007622.1 toxic shock syndrome toxin-1 400454 tsst-1 3795130 tsst-1 Staphylococcus aureus RF122 toxic shock syndrome toxin-1 YP_415862.1 399750 R 273036 CDS YP_415863.1 82750122 3793117 400915..401265 1 NC_007622.1 pathogenicity island protein 401265 3793117 SAB0361 Staphylococcus aureus RF122 pathogenicity island protein YP_415863.1 400915 D 273036 CDS YP_415864.1 82750123 3793118 401383..401895 1 NC_007622.1 pathogenicity island protein 401895 3793118 SAB0362 Staphylococcus aureus RF122 pathogenicity island protein YP_415864.1 401383 D 273036 CDS YP_415865.1 82750124 3793185 402652..403467 1 NC_007622.1 enterotoxin C-bovine 403467 sec-bov 3793185 sec-bov Staphylococcus aureus RF122 enterotoxin C-bovine YP_415865.1 402652 D 273036 CDS YP_415866.1 82750125 3794617 complement(403634..404356) 1 NC_007622.1 enterotoxin L 404356 sel 3794617 sel Staphylococcus aureus RF122 enterotoxin L YP_415866.1 403634 R 273036 CDS YP_415867.1 82750126 3793119 complement(404861..405253) 1 NC_007622.1 hypothetical protein 405253 3793119 SAB0365c Staphylococcus aureus RF122 hypothetical protein YP_415867.1 404861 R 273036 CDS YP_415868.1 82750127 3793121 complement(405878..406078) 1 NC_007622.1 hypothetical protein 406078 3793121 SAB0367c Staphylococcus aureus RF122 hypothetical protein YP_415868.1 405878 R 273036 CDS YP_415869.1 82750128 3793122 406679..406942 1 NC_007622.1 hypothetical protein 406942 3793122 SAB0368 Staphylococcus aureus RF122 hypothetical protein YP_415869.1 406679 D 273036 CDS YP_415870.1 82750129 3793123 complement(407602..408186) 1 NC_007622.1 hypothetical protein 408186 3793123 SAB0369c Staphylococcus aureus RF122 hypothetical protein YP_415870.1 407602 R 273036 CDS YP_415871.1 82750130 3793124 408432..408599 1 NC_007622.1 hypothetical protein 408599 3793124 SAB0370 Staphylococcus aureus RF122 hypothetical protein YP_415871.1 408432 D 273036 CDS YP_415872.1 82750131 3793125 408681..409088 1 NC_007622.1 hypothetical protein 409088 3793125 SAB0371 Staphylococcus aureus RF122 hypothetical protein YP_415872.1 408681 D 273036 CDS YP_415873.1 82750132 3793126 409135..409617 1 NC_007622.1 hypothetical protein 409617 3793126 SAB0372 Staphylococcus aureus RF122 hypothetical protein YP_415873.1 409135 D 273036 CDS YP_415874.1 82750133 3793127 complement(410029..410388) 1 NC_007622.1 hypothetical protein 410388 3793127 SAB0373c Staphylococcus aureus RF122 hypothetical protein YP_415874.1 410029 R 273036 CDS YP_415875.1 82750134 3793128 complement(410464..411252) 1 NC_007622.1 hypothetical protein 411252 3793128 SAB0374c Staphylococcus aureus RF122 hypothetical protein YP_415875.1 410464 R 273036 CDS YP_415876.1 82750135 3793129 complement(411321..411581) 1 NC_007622.1 hypothetical protein 411581 3793129 SAB0375c Staphylococcus aureus RF122 hypothetical protein YP_415876.1 411321 R 273036 CDS YP_415877.1 82750136 3794624 411724..412404 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 412404 set11 3794624 set11 Staphylococcus aureus RF122 superantigen-like protein YP_415877.1 411724 D 273036 CDS YP_415878.1 82750137 3794623 412692..413387 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 413387 set10 3794623 set10 Staphylococcus aureus RF122 superantigen-like protein YP_415878.1 412692 D 273036 CDS YP_415879.1 82750138 3794630 413678..414724 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 414724 set9 3794630 set9 Staphylococcus aureus RF122 superantigen-like protein YP_415879.1 413678 D 273036 CDS YP_415880.1 82750139 3794629 415089..415739 1 NC_007622.1 SSL5, SET3, SET10; bind P-selectin glycoprotein ligand-1 and inhibit P-selectin-mediated neutrophil rolling along the endothelium; these proteins share structural homology to known superantigens but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 5 415739 set7 3794629 set7 Staphylococcus aureus RF122 superantigen-like protein 5 YP_415880.1 415089 D 273036 CDS YP_415881.1 82750140 3794628 416237..416932 1 NC_007622.1 SSL7, SET1; blocks IgA-FcR interactions and inhibits complement, leading to increased survival of a sensitive bacterium in blood; superantigen-like protein 7 416932 set5 3794628 set5 Staphylococcus aureus RF122 superantigen-like protein 7 YP_415881.1 416237 D 273036 CDS YP_415882.1 82750141 3794627 417271..417969 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 417969 set4 3794627 set4 Staphylococcus aureus RF122 superantigen-like protein YP_415882.1 417271 D 273036 CDS YP_415883.1 82750142 3794626 418346..419044 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 419044 set3 3794626 set3 Staphylococcus aureus RF122 superantigen-like protein YP_415883.1 418346 D 273036 CDS YP_415884.1 82750143 3794625 419410..420069 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 420069 set2 3794625 set2 Staphylococcus aureus RF122 superantigen-like protein YP_415884.1 419410 D 273036 CDS YP_415885.1 82750144 3794089 420356..421912 1 NC_007622.1 type I site-specific deoxyribonuclease 421912 hsdM 3794089 hsdM Staphylococcus aureus RF122 type I site-specific deoxyribonuclease YP_415885.1 420356 D 273036 CDS YP_415886.1 82750145 3794622 423535..424230 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 424230 set1 3794622 set1 Staphylococcus aureus RF122 superantigen-like protein YP_415886.1 423535 D 273036 CDS YP_415887.1 82750146 3793130 424252..425760 1 NC_007622.1 hypothetical protein 425760 3793130 SAB0387 Staphylococcus aureus RF122 hypothetical protein YP_415887.1 424252 D 273036 CDS YP_415888.1 82750147 3793131 complement(425869..426177) 1 NC_007622.1 hypothetical protein 426177 3793131 SAB0388c Staphylococcus aureus RF122 hypothetical protein YP_415888.1 425869 R 273036 CDS YP_415889.1 82750148 3793151 426542..427324 1 NC_007622.1 lipoprotein 427324 3793151 SAB0389 Staphylococcus aureus RF122 lipoprotein YP_415889.1 426542 D 273036 CDS YP_415890.1 82750149 3793152 427372..427785 1 NC_007622.1 lipoprotein 427785 3793152 SAB0390 Staphylococcus aureus RF122 lipoprotein YP_415890.1 427372 D 273036 CDS YP_415891.1 82750150 3793153 427791..428153 1 NC_007622.1 hypothetical protein 428153 3793153 SAB0391 Staphylococcus aureus RF122 hypothetical protein YP_415891.1 427791 D 273036 CDS YP_415892.1 82750151 3793154 428201..428986 1 NC_007622.1 hypothetical protein 428986 3793154 SAB0392 Staphylococcus aureus RF122 hypothetical protein YP_415892.1 428201 D 273036 CDS YP_415893.1 82750152 3793155 429014..429784 1 NC_007622.1 hypothetical protein 429784 3793155 SAB0393 Staphylococcus aureus RF122 hypothetical protein YP_415893.1 429014 D 273036 CDS YP_415894.1 82750153 3793156 429813..430607 1 NC_007622.1 hypothetical protein 430607 3793156 SAB0394 Staphylococcus aureus RF122 hypothetical protein YP_415894.1 429813 D 273036 CDS YP_415895.1 82750154 3793157 430677..431453 1 NC_007622.1 hypothetical protein 431453 3793157 SAB0395 Staphylococcus aureus RF122 hypothetical protein YP_415895.1 430677 D 273036 CDS YP_415896.1 82750155 3793158 431654..432442 1 NC_007622.1 hypothetical protein 432442 3793158 SAB0396 Staphylococcus aureus RF122 hypothetical protein YP_415896.1 431654 D 273036 CDS YP_415897.1 82750156 3793159 432435..433760 1 NC_007622.1 hypothetical protein 433760 3793159 SAB0397 Staphylococcus aureus RF122 hypothetical protein YP_415897.1 432435 D 273036 CDS YP_415898.1 82750157 3793160 433757..434080 1 NC_007622.1 hypothetical protein 434080 3793160 SAB0398 Staphylococcus aureus RF122 hypothetical protein YP_415898.1 433757 D 273036 CDS YP_415899.1 82750158 3793162 complement(434713..434907) 1 NC_007622.1 hypothetical protein 434907 3793162 SAB0400c Staphylococcus aureus RF122 hypothetical protein YP_415899.1 434713 R 273036 CDS YP_415900.1 82750159 3793163 435092..436294 1 NC_007622.1 hypothetical protein 436294 3793163 SAB0401 Staphylococcus aureus RF122 hypothetical protein YP_415900.1 435092 D 273036 CDS YP_415901.1 82750160 3793164 437880..439364 1 NC_007622.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit 5 439364 3793164 SAB0402 Staphylococcus aureus RF122 NADH dehydrogenase subunit 5 YP_415901.1 437880 D 273036 CDS YP_415902.1 82750161 3793165 439377..442082 1 NC_007622.1 hypothetical protein 442082 3793165 SAB0403 Staphylococcus aureus RF122 hypothetical protein YP_415902.1 439377 D 273036 CDS YP_415903.1 82750162 3793166 442244..442606 1 NC_007622.1 hypothetical protein 442606 3793166 SAB0404 Staphylococcus aureus RF122 hypothetical protein YP_415903.1 442244 D 273036 CDS YP_415904.1 82750163 3793167 complement(442835..443170) 1 NC_007622.1 hypothetical protein 443170 3793167 SAB0405c Staphylococcus aureus RF122 hypothetical protein YP_415904.1 442835 R 273036 CDS YP_415905.1 82750164 3793168 443289..443963 1 NC_007622.1 hypothetical protein 443963 3793168 SAB0406 Staphylococcus aureus RF122 hypothetical protein YP_415905.1 443289 D 273036 CDS YP_415906.1 82750165 3793169 444000..444734 1 NC_007622.1 hypothetical protein 444734 3793169 SAB0407 Staphylococcus aureus RF122 hypothetical protein YP_415906.1 444000 D 273036 CDS YP_415907.1 82750166 3793170 445139..446479 1 NC_007622.1 sodium-dependent transporter 446479 3793170 SAB0408 Staphylococcus aureus RF122 sodium-dependent transporter YP_415907.1 445139 D 273036 CDS YP_415908.1 82750167 3792706 446675..447601 1 NC_007622.1 cysteine synthase 447601 3792706 SAB0409 Staphylococcus aureus RF122 cysteine synthase YP_415908.1 446675 D 273036 CDS YP_415909.1 82750168 3792707 447594..448736 1 NC_007622.1 cystathionine gamma-synthase 448736 3792707 SAB0410 Staphylococcus aureus RF122 cystathionine gamma-synthase YP_415909.1 447594 D 273036 CDS YP_415910.1 82750169 3792708 449031..450056 1 NC_007622.1 ABC transporter ATP-binding protein 450056 3792708 SAB0411 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415910.1 449031 D 273036 CDS YP_415911.1 82750170 3792709 450060..450719 1 NC_007622.1 ABC transporter ATP-binding protein 450719 3792709 SAB0412 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_415911.1 450060 D 273036 CDS YP_415912.1 82750171 3792710 450756..451598 1 NC_007622.1 membrane lipoprotein 451598 3792710 SAB0413 Staphylococcus aureus RF122 membrane lipoprotein YP_415912.1 450756 D 273036 CDS YP_415913.1 82750172 3792711 451931..452938 1 NC_007622.1 autolysin 452938 3792711 SAB0414 Staphylococcus aureus RF122 autolysin YP_415913.1 451931 D 273036 CDS YP_415914.1 82750173 3792712 complement(453125..453394) 1 NC_007622.1 hypothetical protein 453394 3792712 SAB0415c Staphylococcus aureus RF122 hypothetical protein YP_415914.1 453125 R 273036 CDS YP_415915.1 82750174 3792713 453535..453939 1 NC_007622.1 hypothetical protein 453939 3792713 SAB0416 Staphylococcus aureus RF122 hypothetical protein YP_415915.1 453535 D 273036 CDS YP_415916.1 82750175 3792714 453929..454414 1 NC_007622.1 hypothetical protein 454414 3792714 SAB0417 Staphylococcus aureus RF122 hypothetical protein YP_415916.1 453929 D 273036 CDS YP_415917.1 82750176 3792715 complement(454583..455365) 1 NC_007622.1 hypothetical protein 455365 3792715 SAB0418c Staphylococcus aureus RF122 hypothetical protein YP_415917.1 454583 R 273036 CDS YP_415918.1 82750177 3792716 complement(455362..456480) 1 NC_007622.1 hypothetical protein 456480 3792716 SAB0419c Staphylococcus aureus RF122 hypothetical protein YP_415918.1 455362 R 273036 CDS YP_415919.1 82750178 3792717 complement(456595..457479) 1 NC_007622.1 transcriptional activator of glutamate synthase operon 457479 3792717 SAB0420c Staphylococcus aureus RF122 transcriptional activator of glutamate synthase operon YP_415919.1 456595 R 273036 CDS YP_415920.1 82750179 3793655 457660..462159 1 NC_007622.1 glutamate synthase large subunit 462159 gltA 3793655 gltA Staphylococcus aureus RF122 glutamate synthase large subunit YP_415920.1 457660 D 273036 CDS YP_415921.1 82750180 3793656 462177..463640 1 NC_007622.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 463640 gltD 3793656 gltD Staphylococcus aureus RF122 glutamate synthase subunit beta YP_415921.1 462177 D 273036 CDS YP_415922.1 82750181 3792718 464475..465902 1 NC_007622.1 PTS system trehalose-specific IIBC component 465902 3792718 SAB0423 Staphylococcus aureus RF122 PTS system trehalose-specific IIBC component YP_415922.1 464475 D 273036 CDS YP_415923.1 82750182 3792719 465966..467606 1 NC_007622.1 alpha-glucosidase 467606 3792719 SAB0424 Staphylococcus aureus RF122 alpha-glucosidase YP_415923.1 465966 D 273036 CDS YP_415924.1 82750183 3792720 467652..468359 1 NC_007622.1 trehalose operon transcriptional repressor 468359 3792720 SAB0425 Staphylococcus aureus RF122 trehalose operon transcriptional repressor YP_415924.1 467652 D 273036 CDS YP_415925.1 82750184 3792721 469000..469524 1 NC_007622.1 acetyltransferase family protein 469524 3792721 SAB0426 Staphylococcus aureus RF122 acetyltransferase family protein YP_415925.1 469000 D 273036 CDS YP_415926.1 82750185 3793350 469593..471290 1 NC_007622.1 DNA polymerase III gamma and tau subunits 471290 dnaX 3793350 dnaX Staphylococcus aureus RF122 DNA polymerase III gamma and tau subunits YP_415926.1 469593 D 273036 CDS YP_415927.1 82750186 3792722 471380..471697 1 NC_007622.1 hypothetical protein 471697 3792722 SAB0428 Staphylococcus aureus RF122 hypothetical protein YP_415927.1 471380 D 273036 CDS YP_415928.1 82750187 3794275 471704..472300 1 NC_007622.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 472300 recR 3794275 recR Staphylococcus aureus RF122 recombination protein RecR YP_415928.1 471704 D 273036 CDS YP_415929.1 82750188 3792723 478882..480219 1 NC_007622.1 lysine decarboxylase 480219 3792723 SAB0430 Staphylococcus aureus RF122 lysine decarboxylase YP_415929.1 478882 D 273036 CDS YP_415930.1 82750189 3794331 480221..480838 1 NC_007622.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 480838 tmk 3794331 tmk Staphylococcus aureus RF122 thymidylate kinase YP_415930.1 480221 D 273036 CDS YP_415931.1 82750190 3792724 480866..481195 1 NC_007622.1 hypothetical protein 481195 3792724 SAB0432 Staphylococcus aureus RF122 hypothetical protein YP_415931.1 480866 D 273036 CDS YP_415932.1 82750191 3794085 481409..482335 1 NC_007622.1 DNA polymerase III delta prime subunit 482335 holB 3794085 holB Staphylococcus aureus RF122 DNA polymerase III delta prime subunit YP_415932.1 481409 D 273036 CDS YP_415933.1 82750192 3793229 482336..483139 1 NC_007622.1 signal peptidase II 483139 3793229 SAB0434 Staphylococcus aureus RF122 signal peptidase II YP_415933.1 482336 D 273036 CDS YP_415934.1 82750193 3793230 483156..483503 1 NC_007622.1 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 483503 3793230 SAB0435 Staphylococcus aureus RF122 DNA replication intiation control protein YabA YP_415934.1 483156 D 273036 CDS YP_415935.1 82750194 3793231 483777..484502 1 NC_007622.1 hypothetical protein 484502 3793231 SAB0436 Staphylococcus aureus RF122 hypothetical protein YP_415935.1 483777 D 273036 CDS YP_415936.1 82750195 3793232 484495..484743 1 NC_007622.1 hypothetical protein 484743 3793232 SAB0437 Staphylococcus aureus RF122 hypothetical protein YP_415936.1 484495 D 273036 CDS YP_415937.1 82750196 3793233 484745..485584 1 NC_007622.1 tetrapyrrole methylase family protein 485584 3793233 SAB0438 Staphylococcus aureus RF122 tetrapyrrole methylase family protein YP_415937.1 484745 D 273036 CDS YP_415938.1 82750197 3792980 485869..487842 1 NC_007622.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 487842 metG 3792980 metG Staphylococcus aureus RF122 methionyl-tRNA synthetase YP_415938.1 485869 D 273036 CDS YP_415939.1 82750198 3793234 487873..488646 1 NC_007622.1 sec-independent hydrolase 488646 3793234 SAB0440 Staphylococcus aureus RF122 sec-independent hydrolase YP_415939.1 487873 D 273036 CDS YP_415940.1 82750199 3793235 488813..489349 1 NC_007622.1 hypothetical protein 489349 3793235 SAB0441 Staphylococcus aureus RF122 hypothetical protein YP_415940.1 488813 D 273036 CDS YP_415941.1 82750200 3793236 489342..490253 1 NC_007622.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 490253 ksgA 3793236 ksgA Staphylococcus aureus RF122 dimethyladenosine transferase YP_415941.1 489342 D 273036 CDS YP_415942.1 82750201 3793237 490353..490616 1 NC_007622.1 hypothetical protein 490616 3793237 SAB0443 Staphylococcus aureus RF122 hypothetical protein YP_415942.1 490353 D 273036 CDS YP_415943.1 82750202 3793238 490926..491774 1 NC_007622.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 491774 ipk 3793238 ipk Staphylococcus aureus RF122 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_415943.1 490926 D 273036 CDS YP_415944.1 82750203 3794682 491788..492612 1 NC_007622.1 pur operon repressor 492612 purR 3794682 purR Staphylococcus aureus RF122 pur operon repressor YP_415944.1 491788 D 273036 CDS YP_415945.1 82750204 3794178 492629..493009 1 NC_007622.1 translation initiation inhibitor 493009 yabJ 3794178 yabJ Staphylococcus aureus RF122 translation initiation inhibitor YP_415945.1 492629 D 273036 CDS YP_415946.1 82750205 3793007 493081..493383 1 NC_007622.1 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 493383 spoVG 3793007 spoVG Staphylococcus aureus RF122 regulatory protein SpoVG YP_415946.1 493081 D 273036 CDS YP_415947.1 82750206 3794355 493720..495078 1 NC_007622.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 495078 glmU 3794355 glmU Staphylococcus aureus RF122 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_415947.1 493720 D 273036 CDS YP_415948.1 82750207 3794038 495225..496190 1 NC_007622.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 496190 prs 3794038 prs Staphylococcus aureus RF122 ribose-phosphate pyrophosphokinase YP_415948.1 495225 D 273036 CDS YP_415949.1 82750208 3794039 496340..496993 1 NC_007622.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 496993 prs 3794039 prs Staphylococcus aureus RF122 50S ribosomal protein L25/general stress protein Ctc YP_415949.1 496340 D 273036 CDS YP_415950.1 82750209 3793239 497304..497876 1 NC_007622.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 497876 3793239 SAB0451 Staphylococcus aureus RF122 peptidyl-tRNA hydrolase YP_415950.1 497304 D 273036 CDS YP_415951.1 82750210 3793240 497876..501382 1 NC_007622.1 transcription-repair coupling factor 501382 3793240 SAB0452 Staphylococcus aureus RF122 transcription-repair coupling factor YP_415951.1 497876 D 273036 CDS YP_415952.1 82750211 3793241 501372..502898 1 NC_007622.1 membrane spanning protein 502898 3793241 SAB0453 Staphylococcus aureus RF122 membrane spanning protein YP_415952.1 501372 D 273036 CDS YP_415953.1 82750212 3793242 502898..504091 1 NC_007622.1 tetrapyrrole methylase 504091 3793242 SAB0454 Staphylococcus aureus RF122 tetrapyrrole methylase YP_415953.1 502898 D 273036 CDS YP_415954.1 82750213 3793243 504088..504351 1 NC_007622.1 hypothetical protein 504351 3793243 SAB0455 Staphylococcus aureus RF122 hypothetical protein YP_415954.1 504088 D 273036 CDS YP_415955.1 82750214 3793244 504369..504761 1 NC_007622.1 hypothetical protein 504761 3793244 SAB0456 Staphylococcus aureus RF122 hypothetical protein YP_415955.1 504369 D 273036 CDS YP_415956.1 82750215 3793245 504866..505267 1 NC_007622.1 hypothetical protein 505267 3793245 SAB0457 Staphylococcus aureus RF122 hypothetical protein YP_415956.1 504866 D 273036 CDS YP_415957.1 82750216 3793246 505447..506742 1 NC_007622.1 hypothetical protein 506742 3793246 SAB0458 Staphylococcus aureus RF122 hypothetical protein YP_415957.1 505447 D 273036 CDS YP_415958.1 82750217 3794087 506747..507286 1 NC_007622.1 hypoxanthine-guanine phosphoribosyltransferase 507286 hpt 3794087 hpt Staphylococcus aureus RF122 hypoxanthine-guanine phosphoribosyltransferase YP_415958.1 506747 D 273036 CDS YP_415959.1 82750218 3794345 507544..509637 1 NC_007622.1 cell division protein 509637 ftsH 3794345 ftsH Staphylococcus aureus RF122 cell division protein YP_415959.1 507544 D 273036 CDS YP_415960.1 82750219 3793247 510107..510988 1 NC_007622.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 510988 hslO 3793247 hslO Staphylococcus aureus RF122 Hsp33-like chaperonin YP_415960.1 510107 D 273036 CDS YP_415961.1 82750220 3793248 511167..512099 1 NC_007622.1 cysteine synthase 512099 3793248 SAB0462 Staphylococcus aureus RF122 cysteine synthase YP_415961.1 511167 D 273036 CDS YP_415962.1 82750221 3794340 512315..513118 1 NC_007622.1 dihydropteroate synthase 513118 folP 3794340 folP Staphylococcus aureus RF122 dihydropteroate synthase YP_415962.1 512315 D 273036 CDS YP_415963.1 82750222 3794747 513096..513461 1 NC_007622.1 dihydroneopterin aldolase 513461 folB 3794747 folB Staphylococcus aureus RF122 dihydroneopterin aldolase YP_415963.1 513096 D 273036 CDS YP_415964.1 82750223 3794750 513458..513934 1 NC_007622.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 513934 folK 3794750 folK Staphylococcus aureus RF122 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_415964.1 513458 D 273036 CDS YP_415965.1 82750224 3794764 514473..515960 1 NC_007622.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 515960 lysS 3794764 lysS Staphylococcus aureus RF122 lysyl-tRNA synthetase YP_415965.1 514473 D 273036 CDS YP_415966.1 82750225 3793584 complement(524654..526036) 1 NC_007622.1 GntR family transcriptional regulator 526036 3793584 SAB0468c Staphylococcus aureus RF122 GntR family transcriptional regulator YP_415966.1 524654 R 273036 CDS YP_415967.1 82750226 3793585 526153..527028 1 NC_007622.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 527028 3793585 SAB0469 Staphylococcus aureus RF122 pyridoxal biosynthesis lyase PdxS YP_415967.1 526153 D 273036 CDS YP_415968.1 82750227 3793586 527032..527592 1 NC_007622.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 527592 3793586 SAB0470 Staphylococcus aureus RF122 glutamine amidotransferase subunit PdxT YP_415968.1 527032 D 273036 CDS YP_415969.1 82750228 3793628 complement(527800..529014) 1 NC_007622.1 pyrimidine nucleoside transport protein 529014 nupC 3793628 nupC Staphylococcus aureus RF122 pyrimidine nucleoside transport protein YP_415969.1 527800 R 273036 CDS YP_415970.1 82750229 3793587 529172..529633 1 NC_007622.1 transcriptional repressor of stress genes 529633 3793587 SAB0472 Staphylococcus aureus RF122 transcriptional repressor of stress genes YP_415970.1 529172 D 273036 CDS YP_415971.1 82750230 3793588 529652..530218 1 NC_007622.1 hypothetical protein 530218 3793588 SAB0473 Staphylococcus aureus RF122 hypothetical protein YP_415971.1 529652 D 273036 CDS YP_415972.1 82750231 3793589 530208..531215 1 NC_007622.1 ATP:guanido phosphotransferase 531215 3793589 SAB0474 Staphylococcus aureus RF122 ATP:guanido phosphotransferase YP_415972.1 530208 D 273036 CDS YP_415973.1 82750232 3794833 531229..533685 1 NC_007622.1 endopeptidase 533685 clpC 3794833 clpC Staphylococcus aureus RF122 endopeptidase YP_415973.1 531229 D 273036 CDS YP_415974.1 82750233 3794269 534176..535540 1 NC_007622.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 535540 radA 3794269 radA Staphylococcus aureus RF122 DNA repair protein RadA YP_415974.1 534176 D 273036 CDS YP_415975.1 82750234 3793590 535565..536638 1 NC_007622.1 hypothetical protein 536638 3793590 SAB0477 Staphylococcus aureus RF122 hypothetical protein YP_415975.1 535565 D 273036 CDS YP_415976.1 82750235 3793658 537195..538649 1 NC_007622.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 538649 gltX 3793658 gltX Staphylococcus aureus RF122 glutamyl-tRNA synthetase YP_415976.1 537195 D 273036 CDS YP_415977.1 82750236 3795284 539073..539720 1 NC_007622.1 serine acetyltransferase 539720 cysE 3795284 cysE Staphylococcus aureus RF122 serine acetyltransferase YP_415977.1 539073 D 273036 CDS YP_415978.1 82750237 3795286 539704..541104 1 NC_007622.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 541104 cysS 3795286 cysS Staphylococcus aureus RF122 cysteinyl-tRNA synthetase YP_415978.1 539704 D 273036 CDS YP_415979.1 82750238 3793591 541097..541501 1 NC_007622.1 hypothetical protein 541501 3793591 SAB0481 Staphylococcus aureus RF122 hypothetical protein YP_415979.1 541097 D 273036 CDS YP_415980.1 82750239 3793592 541509..542255 1 NC_007622.1 tRNA/rRNA methyltransferase 542255 3793592 SAB0482 Staphylococcus aureus RF122 tRNA/rRNA methyltransferase YP_415980.1 541509 D 273036 CDS YP_415981.1 82750240 3793593 542255..542779 1 NC_007622.1 hypothetical protein 542779 3793593 SAB0483 Staphylococcus aureus RF122 hypothetical protein YP_415981.1 542255 D 273036 CDS YP_415982.1 82750241 3793594 542860..543429 1 NC_007622.1 hypothetical protein 543429 3793594 SAB0484 Staphylococcus aureus RF122 hypothetical protein YP_415982.1 542860 D 273036 CDS YP_415983.1 82750242 3792922 543544..543687 1 NC_007622.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 543687 rpmG 3792922 rpmG Staphylococcus aureus RF122 50S ribosomal protein L33 YP_415983.1 543544 D 273036 CDS YP_415984.1 82750243 3793189 543743..543925 1 NC_007622.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 543925 secE 3793189 secE Staphylococcus aureus RF122 preprotein translocase subunit SecE YP_415984.1 543743 D 273036 CDS YP_415985.1 82750244 3793630 543938..544486 1 NC_007622.1 transcription antitermination protein 544486 nusG 3793630 nusG Staphylococcus aureus RF122 transcription antitermination protein YP_415985.1 543938 D 273036 CDS YP_415986.1 82750245 3795084 544667..545089 1 NC_007622.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 545089 rplK 3795084 rplK Staphylococcus aureus RF122 50S ribosomal protein L11 YP_415986.1 544667 D 273036 CDS YP_415987.1 82750246 3793107 545297..545989 1 NC_007622.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 545989 rplA 3793107 rplA Staphylococcus aureus RF122 50S ribosomal protein L1 YP_415987.1 545297 D 273036 CDS YP_415988.1 82750247 3795083 546261..546761 1 NC_007622.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 546761 rplJ 3795083 rplJ Staphylococcus aureus RF122 50S ribosomal protein L10 YP_415988.1 546261 D 273036 CDS YP_415990.1 82750249 3793595 547344..547952 1 NC_007622.1 hypothetical protein 547952 3793595 SAB0492 Staphylococcus aureus RF122 hypothetical protein YP_415990.1 547344 D 273036 CDS YP_415991.1 82750250 3792928 548167..551718 1 NC_007622.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 551718 rpoB 3792928 rpoB Staphylococcus aureus RF122 DNA-directed RNA polymerase subunit beta YP_415991.1 548167 D 273036 CDS YP_415992.1 82750251 3792929 551855..555478 1 NC_007622.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 555478 rpoC 3792929 rpoC Staphylococcus aureus RF122 DNA-directed RNA polymerase subunit beta' YP_415992.1 551855 D 273036 CDS YP_415993.1 82750252 3793596 555600..555869 1 NC_007622.1 in Bacillus subtilis this non-essential protein associates with the ribosome; ribosomal protein L7Ae-like 555869 3793596 SAB0495 Staphylococcus aureus RF122 ribosomal protein L7Ae-like YP_415993.1 555600 D 273036 CDS YP_415994.1 82750253 3794987 555967..556380 1 NC_007622.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 556380 rpsL 3794987 rpsL Staphylococcus aureus RF122 30S ribosomal protein S12 YP_415994.1 555967 D 273036 CDS YP_415995.1 82750254 3792938 556446..556916 1 NC_007622.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 556916 rpsG 3792938 rpsG Staphylococcus aureus RF122 30S ribosomal protein S7 YP_415995.1 556446 D 273036 CDS YP_415996.1 82750255 3794348 557039..559120 1 NC_007622.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 559120 fus 3794348 fus Staphylococcus aureus RF122 elongation factor G YP_415996.1 557039 D 273036 CDS YP_415997.1 82750256 3795131 559337..560521 1 NC_007622.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 560521 tuf 3795131 tuf Staphylococcus aureus RF122 elongation factor Tu YP_415997.1 559337 D 273036 CDS YP_415998.1 82750257 3793597 complement(560803..561978) 1 NC_007622.1 N-acyl-L-amino acid amidohydrolase 561978 3793597 SAB0500c Staphylococcus aureus RF122 N-acyl-L-amino acid amidohydrolase YP_415998.1 560803 R 273036 CDS YP_415999.1 82750258 3795273 562149..563336 1 NC_007622.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 563336 kbl 3795273 kbl Staphylococcus aureus RF122 2-amino-3-ketobutyrate coenzyme A ligase YP_415999.1 562149 D 273036 CDS YP_416000.1 82750259 3793598 563603..564481 1 NC_007622.1 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA 564481 3793598 SAB0502 Staphylococcus aureus RF122 chaperone protein HchA YP_416000.1 563603 D 273036 CDS YP_416001.1 82750260 3793599 564640..566277 1 NC_007622.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 566277 3793599 SAB0503 Staphylococcus aureus RF122 ribulokinase YP_416001.1 564640 D 273036 CDS YP_416002.1 82750261 3793600 566491..567456 1 NC_007622.1 L-threonine 3-dehydrogenase 567456 3793600 SAB0504 Staphylococcus aureus RF122 L-threonine 3-dehydrogenase YP_416002.1 566491 D 273036 CDS YP_416003.1 82750262 3793601 567791..568867 1 NC_007622.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 568867 3793601 SAB0505 Staphylococcus aureus RF122 branched-chain amino acid aminotransferase YP_416003.1 567791 D 273036 CDS YP_416004.1 82750263 3794712 569118..569801 1 NC_007622.1 hypothetical protein 569801 3794712 SAB0506 Staphylococcus aureus RF122 hypothetical protein YP_416004.1 569118 D 273036 CDS YP_416005.1 82750264 3794713 complement(569917..570579) 1 NC_007622.1 deoxypurine kinase subunit 570579 3794713 SAB0507c Staphylococcus aureus RF122 deoxypurine kinase subunit YP_416005.1 569917 R 273036 CDS YP_416006.1 82750265 3794714 complement(570572..571189) 1 NC_007622.1 deoxypurine kinase subunit 571189 3794714 SAB0508c Staphylococcus aureus RF122 deoxypurine kinase subunit YP_416006.1 570572 R 273036 CDS YP_416007.1 82750266 3794716 571874..572743 1 NC_007622.1 hypothetical protein 572743 3794716 SAB0510 Staphylococcus aureus RF122 hypothetical protein YP_416007.1 571874 D 273036 CDS YP_416008.1 82750267 3794717 572763..573329 1 NC_007622.1 hypothetical protein 573329 3794717 SAB0511 Staphylococcus aureus RF122 hypothetical protein YP_416008.1 572763 D 273036 CDS YP_416009.1 82750268 3794718 577061..580402 1 NC_007622.1 Ser-Asp rich fibrinogen-binding/bone sialoprotein-binding protein 580402 3794718 SAB0513 Staphylococcus aureus RF122 Ser-Asp rich fibrinogen-binding/bone sialoprotein-binding protein YP_416009.1 577061 D 273036 CDS YP_416010.1 82750269 3794719 580521..581993 1 NC_007622.1 poly(glycerol-phosphate) alpha-glucosyltransferase 581993 3794719 SAB0514 Staphylococcus aureus RF122 poly(glycerol-phosphate) alpha-glucosyltransferase YP_416010.1 580521 D 273036 CDS YP_416011.1 82750270 3794720 complement(582117..583610) 1 NC_007622.1 poly(glycerol-phosphate) alpha-glucosyltransferase 583610 3794720 SAB0515c Staphylococcus aureus RF122 poly(glycerol-phosphate) alpha-glucosyltransferase YP_416011.1 582117 R 273036 CDS YP_416012.1 82750271 3794721 complement(583893..584771) 1 NC_007622.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 584771 3794721 SAB0516c Staphylococcus aureus RF122 GTP cyclohydrolase YP_416012.1 583893 R 273036 CDS YP_416013.1 82750272 3794722 complement(584784..585449) 1 NC_007622.1 hypothetical protein 585449 3794722 SAB0517c Staphylococcus aureus RF122 hypothetical protein YP_416013.1 584784 R 273036 CDS YP_416014.1 82750273 3794723 complement(585463..585822) 1 NC_007622.1 hypothetical protein 585822 3794723 SAB0518c Staphylococcus aureus RF122 hypothetical protein YP_416014.1 585463 R 273036 CDS YP_416015.1 82750274 3794724 586101..586859 1 NC_007622.1 glucosamine-6-phosphate deaminase 586859 3794724 SAB0519 Staphylococcus aureus RF122 glucosamine-6-phosphate deaminase YP_416015.1 586101 D 273036 CDS YP_416016.1 82750275 3794725 586936..587568 1 NC_007622.1 3-hexulose-6-phosphate synthase 587568 3794725 SAB0520 Staphylococcus aureus RF122 3-hexulose-6-phosphate synthase YP_416016.1 586936 D 273036 CDS YP_416017.1 82750276 3794726 587570..588118 1 NC_007622.1 6-phospho-3-hexuloisomerase 588118 3794726 SAB0521 Staphylococcus aureus RF122 6-phospho-3-hexuloisomerase YP_416017.1 587570 D 273036 CDS YP_416018.1 82750277 3794727 588231..588878 1 NC_007622.1 hypothetical protein 588878 3794727 SAB0522 Staphylococcus aureus RF122 hypothetical protein YP_416018.1 588231 D 273036 CDS YP_416019.1 82750278 3794036 589380..590780 1 NC_007622.1 proline/betaine transporter 590780 proP 3794036 proP Staphylococcus aureus RF122 proline/betaine transporter YP_416019.1 589380 D 273036 CDS YP_416020.1 82750279 3794728 591030..591242 1 NC_007622.1 hypothetical protein 591242 3794728 SAB0524 Staphylococcus aureus RF122 hypothetical protein YP_416020.1 591030 D 273036 CDS YP_416021.1 82750280 3794729 591323..592699 1 NC_007622.1 long chain fatty acid CoA ligase 592699 3794729 SAB0525 Staphylococcus aureus RF122 long chain fatty acid CoA ligase YP_416021.1 591323 D 273036 CDS YP_416022.1 82750281 3794730 592701..593840 1 NC_007622.1 acetyl-CoA c-acetyltransferase 593840 3794730 SAB0526 Staphylococcus aureus RF122 acetyl-CoA c-acetyltransferase YP_416022.1 592701 D 273036 CDS YP_416023.1 82750282 3794731 593815..594180 1 NC_007622.1 hypothetical protein 594180 3794731 SAB0527 Staphylococcus aureus RF122 hypothetical protein YP_416023.1 593815 D 273036 CDS YP_416024.1 82750283 3795140 594183..594461 1 NC_007622.1 hypothetical protein 594461 3795140 SAB0528 Staphylococcus aureus RF122 hypothetical protein YP_416024.1 594183 D 273036 CDS YP_416025.1 82750284 3795141 complement(594652..594819) 1 NC_007622.1 hypothetical protein 594819 3795141 SAB0529c Staphylococcus aureus RF122 hypothetical protein YP_416025.1 594652 R 273036 CDS YP_416026.1 82750285 3795142 complement(595352..596182) 1 NC_007622.1 phosphomethylpyrimidine kinase 596182 3795142 SAB0530c Staphylococcus aureus RF122 phosphomethylpyrimidine kinase YP_416026.1 595352 R 273036 CDS YP_416027.1 82750286 3795135 596366..597022 1 NC_007622.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 597022 ung 3795135 ung Staphylococcus aureus RF122 uracil-DNA glycosylase YP_416027.1 596366 D 273036 CDS YP_416028.1 82750287 3795143 597023..597403 1 NC_007622.1 hypothetical protein 597403 3795143 SAB0532 Staphylococcus aureus RF122 hypothetical protein YP_416028.1 597023 D 273036 CDS YP_416029.1 82750288 3795144 597536..597904 1 NC_007622.1 hypothetical protein 597904 3795144 SAB0533 Staphylococcus aureus RF122 hypothetical protein YP_416029.1 597536 D 273036 CDS YP_416030.1 82750289 3795145 598025..599509 1 NC_007622.1 amino acid transporter 599509 3795145 SAB0534 Staphylococcus aureus RF122 amino acid transporter YP_416030.1 598025 D 273036 CDS YP_416031.1 82750290 3795146 complement(599651..600103) 1 NC_007622.1 hypothetical protein 600103 3795146 SAB0535c Staphylococcus aureus RF122 hypothetical protein YP_416031.1 599651 R 273036 CDS YP_416032.1 82750291 3795147 complement(600116..600880) 1 NC_007622.1 hypothetical protein 600880 3795147 SAB0536c Staphylococcus aureus RF122 hypothetical protein YP_416032.1 600116 R 273036 CDS YP_416033.1 82750292 3795148 complement(601427..602179) 1 NC_007622.1 heme peroxidase 602179 3795148 SAB0537c Staphylococcus aureus RF122 heme peroxidase YP_416033.1 601427 R 273036 CDS YP_416034.1 82750293 3794040 602347..603333 1 NC_007622.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 603333 eutD 3794040 eutD Staphylococcus aureus RF122 phosphotransacetylase YP_416034.1 602347 D 273036 CDS YP_416035.1 82750294 3795149 603336..604172 1 NC_007622.1 lipoate-protein ligase A protein 604172 3795149 SAB0539 Staphylococcus aureus RF122 lipoate-protein ligase A protein YP_416035.1 603336 D 273036 CDS YP_416036.1 82750295 3794137 604759..605679 1 NC_007622.1 mevalonate kinase 605679 mvaK1 3794137 mvaK1 Staphylococcus aureus RF122 mevalonate kinase YP_416036.1 604759 D 273036 CDS YP_416037.1 82750296 3794136 605684..606667 1 NC_007622.1 mevalonate diphosphate decarboxylase 606667 mvaD 3794136 mvaD Staphylococcus aureus RF122 mevalonate diphosphate decarboxylase YP_416037.1 605684 D 273036 CDS YP_416038.1 82750297 3794138 606680..607756 1 NC_007622.1 phosphomevalonate kinase 607756 mvaK2 3794138 mvaK2 Staphylococcus aureus RF122 phosphomevalonate kinase YP_416038.1 606680 D 273036 CDS YP_416039.1 82750298 3795150 607933..608274 1 NC_007622.1 hypothetical protein 608274 3795150 SAB0543 Staphylococcus aureus RF122 hypothetical protein YP_416039.1 607933 D 273036 CDS YP_416040.1 82750299 3795151 complement(608326..609648) 1 NC_007622.1 mercury(II) reductase 609648 3795151 SAB0544c Staphylococcus aureus RF122 mercury(II) reductase YP_416040.1 608326 R 273036 CDS YP_416041.1 82750300 3795152 complement(609635..610075) 1 NC_007622.1 hypothetical protein 610075 3795152 SAB0545c Staphylococcus aureus RF122 hypothetical protein YP_416041.1 609635 R 273036 CDS YP_416042.1 82750301 3795153 610699..612096 1 NC_007622.1 hypothetical protein 612096 3795153 SAB0546 Staphylococcus aureus RF122 hypothetical protein YP_416042.1 610699 D 273036 CDS YP_416043.1 82750302 3795154 612100..612729 1 NC_007622.1 hypothetical protein 612729 3795154 SAB0547 Staphylococcus aureus RF122 hypothetical protein YP_416043.1 612100 D 273036 CDS YP_416044.1 82750303 3795155 613195..613824 1 NC_007622.1 hypothetical protein 613824 3795155 SAB0548 Staphylococcus aureus RF122 hypothetical protein YP_416044.1 613195 D 273036 CDS YP_416045.1 82750304 3795156 614042..614590 1 NC_007622.1 hypothetical protein 614590 3795156 SAB0549 Staphylococcus aureus RF122 hypothetical protein YP_416045.1 614042 D 273036 CDS YP_416046.1 82750305 3795157 614627..615169 1 NC_007622.1 hypothetical protein 615169 3795157 SAB0550 Staphylococcus aureus RF122 hypothetical protein YP_416046.1 614627 D 273036 CDS YP_416047.1 82750306 3795158 615494..616120 1 NC_007622.1 hypothetical protein 616120 3795158 SAB0551 Staphylococcus aureus RF122 hypothetical protein YP_416047.1 615494 D 273036 CDS YP_416048.1 82750307 3793368 616390..617328 1 NC_007622.1 oxidoreductase 617328 3793368 SAB0552 Staphylococcus aureus RF122 oxidoreductase YP_416048.1 616390 D 273036 CDS YP_416049.1 82750308 3793369 617538..618074 1 NC_007622.1 hypothetical protein 618074 3793369 SAB0553 Staphylococcus aureus RF122 hypothetical protein YP_416049.1 617538 D 273036 CDS YP_416050.1 82750309 3793370 618243..618719 1 NC_007622.1 hypothetical protein 618719 3793370 SAB0554 Staphylococcus aureus RF122 hypothetical protein YP_416050.1 618243 D 273036 CDS YP_416051.1 82750310 3793371 618759..620054 1 NC_007622.1 hypothetical protein 620054 3793371 SAB0555 Staphylococcus aureus RF122 hypothetical protein YP_416051.1 618759 D 273036 CDS YP_416052.1 82750311 3793372 620097..620603 1 NC_007622.1 hypothetical protein 620603 3793372 SAB0556 Staphylococcus aureus RF122 hypothetical protein YP_416052.1 620097 D 273036 CDS YP_416053.1 82750312 3794829 621102..622112 1 NC_007622.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 622112 adhA 3794829 adhA Staphylococcus aureus RF122 alcohol dehydrogenase YP_416053.1 621102 D 273036 CDS YP_416054.1 82750313 3793373 622375..622803 1 NC_007622.1 hypothetical protein 622803 3793373 SAB0558 Staphylococcus aureus RF122 hypothetical protein YP_416054.1 622375 D 273036 CDS YP_416055.1 82750314 3793374 622800..624461 1 NC_007622.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 624461 argS 3793374 argS Staphylococcus aureus RF122 arginyl-tRNA synthetase YP_416055.1 622800 D 273036 CDS YP_416056.1 82750315 3793376 626171..626806 1 NC_007622.1 DNA repair endonuclease 626806 3793376 SAB0561 Staphylococcus aureus RF122 DNA repair endonuclease YP_416056.1 626171 D 273036 CDS YP_416057.1 82750316 3793377 627054..627941 1 NC_007622.1 similar to Bacillus spp. YvrC protein; iron-binding transport protein 627941 3793377 SAB0562 Staphylococcus aureus RF122 iron-binding transport protein YP_416057.1 627054 D 273036 CDS YP_416058.1 82750317 3793378 628092..629042 1 NC_007622.1 similar to Bacillus spp. YvrB protein; iron(III) ABC transporter permease protein 629042 3793378 SAB0563 Staphylococcus aureus RF122 iron(III) ABC transporter permease protein YP_416058.1 628092 D 273036 CDS YP_416059.1 82750318 3793379 629097..629816 1 NC_007622.1 haloacid dehalogenase hydrolase 629816 3793379 SAB0564 Staphylococcus aureus RF122 haloacid dehalogenase hydrolase YP_416059.1 629097 D 273036 CDS YP_416060.1 82750319 3793380 629800..630600 1 NC_007622.1 hydrolase 630600 3793380 SAB0565 Staphylococcus aureus RF122 hydrolase YP_416060.1 629800 D 273036 CDS YP_416061.1 82750320 3793381 630736..631242 1 NC_007622.1 hypothetical protein 631242 3793381 SAB0566 Staphylococcus aureus RF122 hypothetical protein YP_416061.1 630736 D 273036 CDS YP_416062.1 82750321 3793382 631404..632120 1 NC_007622.1 hypothetical protein 632120 3793382 SAB0567 Staphylococcus aureus RF122 hypothetical protein YP_416062.1 631404 D 273036 CDS YP_416063.1 82750322 3793383 632288..633076 1 NC_007622.1 esterase or lipase 633076 3793383 SAB0568 Staphylococcus aureus RF122 esterase or lipase YP_416063.1 632288 D 273036 CDS YP_416064.1 82750323 3793173 complement(633329..633703) 1 NC_007622.1 accessory regulator A 633703 sarA 3793173 sarA Staphylococcus aureus RF122 accessory regulator A YP_416064.1 633329 R 273036 CDS YP_416065.1 82750324 3793384 complement(634651..635580) 1 NC_007622.1 hypothetical protein 635580 3793384 SAB0570c Staphylococcus aureus RF122 hypothetical protein YP_416065.1 634651 R 273036 CDS YP_416066.1 82750325 3793386 636378..636938 1 NC_007622.1 phage recombinase/integrase 636938 3793386 SAB0572 Staphylococcus aureus RF122 phage recombinase/integrase YP_416066.1 636378 D 273036 CDS YP_416067.1 82750326 3793387 636957..639359 1 NC_007622.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 639359 3793387 SAB0573 Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit A YP_416067.1 636957 D 273036 CDS YP_416068.1 82750327 3794925 639346..639771 1 NC_007622.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 639771 3794925 SAB0574 Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit B YP_416068.1 639346 D 273036 CDS YP_416069.1 82750328 3794926 639768..640112 1 NC_007622.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 640112 3794926 SAB0575 Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit C YP_416069.1 639768 D 273036 CDS YP_416070.1 82750329 3794927 640102..641598 1 NC_007622.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit D 641598 3794927 SAB0576 Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit D YP_416070.1 640102 D 273036 CDS YP_416071.1 82750330 3794928 641599..642081 1 NC_007622.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 642081 3794928 SAB0577 Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit E YP_416071.1 641599 D 273036 CDS YP_416072.1 82750331 3794929 642078..642380 1 NC_007622.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 642380 3794929 SAB0578 Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit F YP_416072.1 642078 D 273036 CDS YP_416073.1 82750332 3794930 642355..642792 1 NC_007622.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 642792 3794930 SAB0579 Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit G YP_416073.1 642355 D 273036 CDS YP_416074.1 82750333 3794931 643132..645174 1 NC_007622.1 sodium-hydrogen exhange family protein 645174 3794931 SAB0580 Staphylococcus aureus RF122 sodium-hydrogen exhange family protein YP_416074.1 643132 D 273036 CDS YP_416075.1 82750334 3792991 complement(646068..646997) 1 NC_007622.1 iron-repressed lipoprotein 646997 mntC 3792991 mntC Staphylococcus aureus RF122 iron-repressed lipoprotein YP_416075.1 646068 R 273036 CDS YP_416076.1 82750335 3792990 complement(646994..647830) 1 NC_007622.1 cation ABC transporter 647830 mntB 3792990 mntB Staphylococcus aureus RF122 cation ABC transporter YP_416076.1 646994 R 273036 CDS YP_416077.1 82750336 3792989 complement(647824..648567) 1 NC_007622.1 cation ATP-binding ABC transporter 648567 mntA 3792989 mntA Staphylococcus aureus RF122 cation ATP-binding ABC transporter YP_416077.1 647824 R 273036 CDS YP_416078.1 82750337 3792992 648689..649333 1 NC_007622.1 iron dependent repressor 649333 mntR 3792992 mntR Staphylococcus aureus RF122 iron dependent repressor YP_416078.1 648689 D 273036 CDS YP_416079.1 82750338 3794932 complement(649413..650165) 1 NC_007622.1 hypothetical protein 650165 3794932 SAB0585c Staphylococcus aureus RF122 hypothetical protein YP_416079.1 649413 R 273036 CDS YP_416080.1 82750339 3793317 650401..651165 1 NC_007622.1 teichoic acid biosynthesis protein 651165 tagA 3793317 tagA Staphylococcus aureus RF122 teichoic acid biosynthesis protein YP_416080.1 650401 D 273036 CDS YP_416081.1 82750340 3793321 complement(651226..652041) 1 NC_007622.1 with TagG is involved in the export of teichoic acids; teichoic acids export protein ATP-binding subunit 652041 tagH 3793321 tagH Staphylococcus aureus RF122 teichoic acids export protein ATP-binding subunit YP_416081.1 651226 R 273036 CDS YP_416082.1 82750341 3793320 652346..653179 1 NC_007622.1 teichoic acid translocation permease protein 653179 tagG 3793320 tagG Staphylococcus aureus RF122 teichoic acid translocation permease protein YP_416082.1 652346 D 273036 CDS YP_416083.1 82750342 3793318 653278..654381 1 NC_007622.1 teichoic acid biosynthesis protein 654381 tagB 3793318 tagB Staphylococcus aureus RF122 teichoic acid biosynthesis protein YP_416083.1 653278 D 273036 CDS YP_416084.1 82750343 3794933 654378..655439 1 NC_007622.1 teichoic acid biosynthesis enzyme 655439 3794933 SAB0590 Staphylococcus aureus RF122 teichoic acid biosynthesis enzyme YP_416084.1 654378 D 273036 CDS YP_416085.1 82750344 3793319 655502..655900 1 NC_007622.1 glycerol-3-phosphate cytidylyltransferase 655900 tagD 3793319 tagD Staphylococcus aureus RF122 glycerol-3-phosphate cytidylyltransferase YP_416085.1 655502 D 273036 CDS YP_416086.1 82750345 3794118 complement(656017..657312) 1 NC_007622.1 penicillin binding protein 4 657312 pbp4 3794118 pbp4 Staphylococcus aureus RF122 penicillin binding protein 4 YP_416086.1 656017 R 273036 CDS YP_416087.1 82750346 3794934 657733..659460 1 NC_007622.1 ATP-binding cassette transporter A 659460 3794934 SAB0593 Staphylococcus aureus RF122 ATP-binding cassette transporter A YP_416087.1 657733 D 273036 CDS YP_416088.1 82750347 3794935 659815..661044 1 NC_007622.1 nucleoside transport protein 661044 3794935 SAB0594 Staphylococcus aureus RF122 nucleoside transport protein YP_416088.1 659815 D 273036 CDS YP_416089.1 82750348 3794936 661569..662402 1 NC_007622.1 hypothetical protein 662402 3794936 SAB0595 Staphylococcus aureus RF122 hypothetical protein YP_416089.1 661569 D 273036 CDS YP_416090.1 82750349 3794735 662682..663479 1 NC_007622.1 ferrichrome transport ATP-binding protein 663479 fhuA 3794735 fhuA Staphylococcus aureus RF122 ferrichrome transport ATP-binding protein YP_416090.1 662682 D 273036 CDS YP_416091.1 82750350 3794736 663515..664519 1 NC_007622.1 ferrichrome transport permease 664519 fhuB 3794736 fhuB Staphylococcus aureus RF122 ferrichrome transport permease YP_416091.1 663515 D 273036 CDS YP_416092.1 82750351 3794737 664516..665532 1 NC_007622.1 ferrichrome transport permease 665532 fhuD 3794737 fhuD Staphylococcus aureus RF122 ferrichrome transport permease YP_416092.1 664516 D 273036 CDS YP_416093.1 82750352 3794937 665766..666734 1 NC_007622.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 666734 3794937 SAB0599 Staphylococcus aureus RF122 dihydroxyacetone kinase subunit DhaK YP_416093.1 665766 D 273036 CDS YP_416094.1 82750353 3794938 666776..667360 1 NC_007622.1 dihydroxyacetone kinase 667360 3794938 SAB0600 Staphylococcus aureus RF122 dihydroxyacetone kinase YP_416094.1 666776 D 273036 CDS YP_416095.1 82750354 3794939 667353..667715 1 NC_007622.1 phosphotransferase mannnose-specific family component IIA 667715 3794939 SAB0601 Staphylococcus aureus RF122 phosphotransferase mannnose-specific family component IIA YP_416095.1 667353 D 273036 CDS YP_416096.1 82750355 3794940 667831..668328 1 NC_007622.1 hypothetical protein 668328 3794940 SAB0602 Staphylococcus aureus RF122 hypothetical protein YP_416096.1 667831 D 273036 CDS YP_416097.1 82750356 3794941 668785..669852 1 NC_007622.1 hypothetical protein 669852 3794941 SAB0603 Staphylococcus aureus RF122 hypothetical protein YP_416097.1 668785 D 273036 CDS YP_416098.1 82750357 3794942 670003..671046 1 NC_007622.1 lipase 671046 3794942 SAB0604 Staphylococcus aureus RF122 lipase YP_416098.1 670003 D 273036 CDS YP_416099.1 82750358 3794943 671375..671803 1 NC_007622.1 hypothetical protein 671803 3794943 SAB0605 Staphylococcus aureus RF122 hypothetical protein YP_416099.1 671375 D 273036 CDS YP_416100.1 82750359 3793927 complement(672010..672516) 1 NC_007622.1 hypothetical protein 672516 3793927 SAB0606c Staphylococcus aureus RF122 hypothetical protein YP_416100.1 672010 R 273036 CDS YP_416101.1 82750360 3793928 672629..673552 1 NC_007622.1 hypothetical protein 673552 3793928 SAB0607 Staphylococcus aureus RF122 hypothetical protein YP_416101.1 672629 D 273036 CDS YP_416102.1 82750361 3793929 673568..674242 1 NC_007622.1 two-component response regulator 674242 3793929 SAB0608 Staphylococcus aureus RF122 two-component response regulator YP_416102.1 673568 D 273036 CDS YP_416103.1 82750362 3793930 674235..675275 1 NC_007622.1 two-component sensor histidine kinase 675275 3793930 SAB0609 Staphylococcus aureus RF122 two-component sensor histidine kinase YP_416103.1 674235 D 273036 CDS YP_416104.1 82750363 3793931 675419..676180 1 NC_007622.1 ATP-binding ABC transport protein 676180 3793931 SAB0610 Staphylococcus aureus RF122 ATP-binding ABC transport protein YP_416104.1 675419 D 273036 CDS YP_416105.1 82750364 3793932 676170..678059 1 NC_007622.1 ABC transporter permease 678059 3793932 SAB0611 Staphylococcus aureus RF122 ABC transporter permease YP_416105.1 676170 D 273036 CDS YP_416106.1 82750365 3793933 678784..679401 1 NC_007622.1 hypothetical protein 679401 3793933 SAB0612 Staphylococcus aureus RF122 hypothetical protein YP_416106.1 678784 D 273036 CDS YP_416107.1 82750366 3793934 679417..680424 1 NC_007622.1 low-affinity inorganic phosphate transporter 680424 3793934 SAB0613 Staphylococcus aureus RF122 low-affinity inorganic phosphate transporter YP_416107.1 679417 D 273036 CDS YP_416108.1 82750367 3793935 complement(681011..681808) 1 NC_007622.1 secretory antigen SsaA-like protein 681808 3793935 SAB0614c Staphylococcus aureus RF122 secretory antigen SsaA-like protein YP_416108.1 681011 R 273036 CDS YP_416109.1 82750368 3793936 682169..682813 1 NC_007622.1 hypothetical protein 682813 3793936 SAB0615 Staphylococcus aureus RF122 hypothetical protein YP_416109.1 682169 D 273036 CDS YP_416110.1 82750369 3793937 683507..685657 1 NC_007622.1 transcriptional regulator 685657 3793937 SAB0616 Staphylococcus aureus RF122 transcriptional regulator YP_416110.1 683507 D 273036 CDS YP_416111.1 82750370 3793938 685737..686162 1 NC_007622.1 hypothetical protein 686162 3793938 SAB0617 Staphylococcus aureus RF122 hypothetical protein YP_416111.1 685737 D 273036 CDS YP_416112.1 82750371 3793939 686352..687068 1 NC_007622.1 hypothetical protein 687068 3793939 SAB0618 Staphylococcus aureus RF122 hypothetical protein YP_416112.1 686352 D 273036 CDS YP_416113.1 82750372 3793940 687068..687541 1 NC_007622.1 hypothetical protein 687541 3793940 SAB0619 Staphylococcus aureus RF122 hypothetical protein YP_416113.1 687068 D 273036 CDS YP_416114.1 82750373 3793941 687894..688538 1 NC_007622.1 hypothetical protein 688538 3793941 SAB0620 Staphylococcus aureus RF122 hypothetical protein YP_416114.1 687894 D 273036 CDS YP_416115.1 82750374 3793942 688654..689520 1 NC_007622.1 LysR family transcriptional regulator 689520 3793942 SAB0621 Staphylococcus aureus RF122 LysR family transcriptional regulator YP_416115.1 688654 D 273036 CDS YP_416116.1 82750375 3793943 689654..690874 1 NC_007622.1 sugar efflux transporter 690874 3793943 SAB0622 Staphylococcus aureus RF122 sugar efflux transporter YP_416116.1 689654 D 273036 CDS YP_416117.1 82750376 3793944 690871..691359 1 NC_007622.1 hypothetical protein 691359 3793944 SAB0623 Staphylococcus aureus RF122 hypothetical protein YP_416117.1 690871 D 273036 CDS YP_416118.1 82750377 3793945 complement(691458..692147) 1 NC_007622.1 hypothetical protein 692147 3793945 SAB0624c Staphylococcus aureus RF122 hypothetical protein YP_416118.1 691458 R 273036 CDS YP_416119.1 82750378 3793946 692274..692717 1 NC_007622.1 hypothetical protein 692717 3793946 SAB0625 Staphylococcus aureus RF122 hypothetical protein YP_416119.1 692274 D 273036 CDS YP_416120.1 82750379 3792765 692790..693179 1 NC_007622.1 hypothetical protein 693179 3792765 SAB0626 Staphylococcus aureus RF122 hypothetical protein YP_416120.1 692790 D 273036 CDS YP_416121.1 82750380 3792766 693317..693616 1 NC_007622.1 hypothetical protein 693616 3792766 SAB0627 Staphylococcus aureus RF122 hypothetical protein YP_416121.1 693317 D 273036 CDS YP_416122.1 82750381 3792767 693696..694238 1 NC_007622.1 hypothetical protein 694238 3792767 SAB0628 Staphylococcus aureus RF122 hypothetical protein YP_416122.1 693696 D 273036 CDS YP_416123.1 82750382 3792768 complement(694334..694900) 1 NC_007622.1 hypothetical protein 694900 3792768 SAB0629c Staphylococcus aureus RF122 hypothetical protein YP_416123.1 694334 R 273036 CDS YP_416124.1 82750383 3792769 complement(694902..695360) 1 NC_007622.1 hypothetical protein 695360 3792769 SAB0630c Staphylococcus aureus RF122 hypothetical protein YP_416124.1 694902 R 273036 CDS YP_416125.1 82750384 3792770 complement(695369..696178) 1 NC_007622.1 hypothetical protein 696178 3792770 SAB0631c Staphylococcus aureus RF122 hypothetical protein YP_416125.1 695369 R 273036 CDS YP_416126.1 82750385 3792657 complement(696217..697092) 1 NC_007622.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 697092 bacA 3792657 bacA Staphylococcus aureus RF122 undecaprenyl pyrophosphate phosphatase YP_416126.1 696217 R 273036 CDS YP_416127.1 82750386 3792771 697311..698942 1 NC_007622.1 ABC transporter ATP-binding protein 698942 3792771 SAB0633 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_416127.1 697311 D 273036 CDS YP_416128.1 82750387 3792772 698939..700612 1 NC_007622.1 ABC transporter ATP-binding protein 700612 3792772 SAB0634 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_416128.1 698939 D 273036 CDS YP_416129.1 82750388 3792773 complement(700739..701182) 1 NC_007622.1 MarR family transcriptional regulator 701182 3792773 SAB0635c Staphylococcus aureus RF122 MarR family transcriptional regulator YP_416129.1 700739 R 273036 CDS YP_416130.1 82750389 3792774 701409..702335 1 NC_007622.1 cobalamin synthesis-related protein 702335 3792774 SAB0636 Staphylococcus aureus RF122 cobalamin synthesis-related protein YP_416130.1 701409 D 273036 CDS YP_416131.1 82750390 3792775 702438..703346 1 NC_007622.1 oxidoreductase 703346 3792775 SAB0637 Staphylococcus aureus RF122 oxidoreductase YP_416131.1 702438 D 273036 CDS YP_416132.1 82750391 3792776 703381..703668 1 NC_007622.1 hypothetical protein 703668 3792776 SAB0638 Staphylococcus aureus RF122 hypothetical protein YP_416132.1 703381 D 273036 CDS YP_416133.1 82750392 3792777 703951..705504 1 NC_007622.1 membrane transporter 705504 3792777 SAB0639 Staphylococcus aureus RF122 membrane transporter YP_416133.1 703951 D 273036 CDS YP_416134.1 82750393 3792778 705584..706963 1 NC_007622.1 DNA photolyase 706963 3792778 SAB0640 Staphylococcus aureus RF122 DNA photolyase YP_416134.1 705584 D 273036 CDS YP_416135.1 82750394 3792779 complement(707035..707319) 1 NC_007622.1 hypothetical protein 707319 3792779 SAB0641c Staphylococcus aureus RF122 hypothetical protein YP_416135.1 707035 R 273036 CDS YP_416136.1 82750395 3792780 complement(707316..707933) 1 NC_007622.1 hypothetical protein 707933 3792780 SAB0642c Staphylococcus aureus RF122 hypothetical protein YP_416136.1 707316 R 273036 CDS YP_416137.1 82750396 3792781 complement(708120..708542) 1 NC_007622.1 hypothetical protein 708542 3792781 SAB0643c Staphylococcus aureus RF122 hypothetical protein YP_416137.1 708120 R 273036 CDS YP_416138.1 82750397 3793623 708751..709917 1 NC_007622.1 quinolone resistance protein 709917 norA 3793623 norA Staphylococcus aureus RF122 quinolone resistance protein YP_416138.1 708751 D 273036 CDS YP_416139.1 82750398 3792782 710210..710662 1 NC_007622.1 hypothetical protein 710662 3792782 SAB0645 Staphylococcus aureus RF122 hypothetical protein YP_416139.1 710210 D 273036 CDS YP_416140.1 82750399 3792783 710836..711318 1 NC_007622.1 transcriptional regulator 711318 3792783 SAB0646 Staphylococcus aureus RF122 transcriptional regulator YP_416140.1 710836 D 273036 CDS YP_416141.1 82750400 3793074 711571..712332 1 NC_007622.1 transcriptional repressor of fructose operon 712332 3793074 SAB0647 Staphylococcus aureus RF122 transcriptional repressor of fructose operon YP_416141.1 711571 D 273036 CDS YP_416142.1 82750401 3793075 712329..713249 1 NC_007622.1 fructose 1-phosphate kinase 713249 3793075 SAB0648 Staphylococcus aureus RF122 fructose 1-phosphate kinase YP_416142.1 712329 D 273036 CDS YP_416143.1 82750402 3794342 713255..715219 1 NC_007622.1 fructose specific permease 715219 fruA 3794342 fruA Staphylococcus aureus RF122 fructose specific permease YP_416143.1 713255 D 273036 CDS YP_416144.1 82750403 3793076 715528..716709 1 NC_007622.1 N-acetylglucosamine-6-phosphate deacetylase 716709 3793076 SAB0650 Staphylococcus aureus RF122 N-acetylglucosamine-6-phosphate deacetylase YP_416144.1 715528 D 273036 CDS YP_416145.1 82750404 3793077 716930..718279 1 NC_007622.1 magnesium and cobalt efflux protein 718279 3793077 SAB0651 Staphylococcus aureus RF122 magnesium and cobalt efflux protein YP_416145.1 716930 D 273036 CDS YP_416146.1 82750405 3793078 718501..719340 1 NC_007622.1 oxidoreductase 719340 3793078 SAB0652 Staphylococcus aureus RF122 oxidoreductase YP_416146.1 718501 D 273036 CDS YP_416147.1 82750406 3793079 719472..720455 1 NC_007622.1 bactoprenol glucosyl transferase or stress response regulator 720455 3793079 SAB0653 Staphylococcus aureus RF122 bactoprenol glucosyl transferase or stress response regulator YP_416147.1 719472 D 273036 CDS YP_416148.1 82750407 3793172 complement(720527..721582) 1 NC_007622.1 histidine protein kinase 721582 saeS 3793172 saeS Staphylococcus aureus RF122 histidine protein kinase YP_416148.1 720527 R 273036 CDS YP_416149.1 82750408 3793171 complement(721582..722268) 1 NC_007622.1 response regulator 722268 saeR 3793171 saeR Staphylococcus aureus RF122 response regulator YP_416149.1 721582 R 273036 CDS YP_416150.1 82750409 3793080 complement(722243..722716) 1 NC_007622.1 hypothetical protein 722716 3793080 SAB0656c Staphylococcus aureus RF122 hypothetical protein YP_416150.1 722243 R 273036 CDS YP_416151.1 82750410 3793081 complement(723058..723498) 1 NC_007622.1 hypothetical protein 723498 3793081 SAB0657c Staphylococcus aureus RF122 hypothetical protein YP_416151.1 723058 R 273036 CDS YP_416152.1 82750411 3793082 complement(723778..724362) 1 NC_007622.1 hypothetical protein 724362 3793082 SAB0658c Staphylococcus aureus RF122 hypothetical protein YP_416152.1 723778 R 273036 CDS YP_416153.1 82750412 3793083 complement(724461..725174) 1 NC_007622.1 coenzyme PQQ synthesis-like protein 725174 3793083 SAB0659c Staphylococcus aureus RF122 coenzyme PQQ synthesis-like protein YP_416153.1 724461 R 273036 CDS YP_416154.1 82750413 3793084 complement(725178..725597) 1 NC_007622.1 6-pyruvoyl tetrahydrobiopterin synthase 725597 3793084 SAB0660c Staphylococcus aureus RF122 6-pyruvoyl tetrahydrobiopterin synthase YP_416154.1 725178 R 273036 CDS YP_416155.1 82750414 3793085 complement(725599..726267) 1 NC_007622.1 aluminum resistance protein 726267 3793085 SAB0661c Staphylococcus aureus RF122 aluminum resistance protein YP_416155.1 725599 R 273036 CDS YP_416156.1 82750415 3793086 726618..727211 1 NC_007622.1 anthranilate/para-aminobenzoate synthase component II 727211 3793086 SAB0662 Staphylococcus aureus RF122 anthranilate/para-aminobenzoate synthase component II YP_416156.1 726618 D 273036 CDS YP_416157.1 82750416 3793087 727186..728346 1 NC_007622.1 anthranilate/para-aminobenzoate synthase component I 728346 3793087 SAB0663 Staphylococcus aureus RF122 anthranilate/para-aminobenzoate synthase component I YP_416157.1 727186 D 273036 CDS YP_416158.1 82750417 3793088 728346..728954 1 NC_007622.1 anthranilate/para-aminobenzoate synthase component I 728954 3793088 SAB0664 Staphylococcus aureus RF122 anthranilate/para-aminobenzoate synthase component I YP_416158.1 728346 D 273036 CDS YP_416159.1 82750418 3793089 729020..729226 1 NC_007622.1 hypothetical protein 729226 3793089 SAB0665 Staphylococcus aureus RF122 hypothetical protein YP_416159.1 729020 D 273036 CDS YP_416160.1 82750419 3793090 729314..730024 1 NC_007622.1 hypothetical protein 730024 3793090 SAB0666 Staphylococcus aureus RF122 hypothetical protein YP_416160.1 729314 D 273036 CDS YP_416161.1 82750420 3793091 730008..731012 1 NC_007622.1 hypothetical protein 731012 3793091 SAB0667 Staphylococcus aureus RF122 hypothetical protein YP_416161.1 730008 D 273036 CDS YP_416162.1 82750421 3793092 731486..733426 1 NC_007622.1 transmembrane sulfatase 733426 3793092 SAB0668 Staphylococcus aureus RF122 transmembrane sulfatase YP_416162.1 731486 D 273036 CDS YP_416163.1 82750422 3793093 733697..735580 1 NC_007622.1 ATP-binding ABC transporter protein 735580 3793093 SAB0669 Staphylococcus aureus RF122 ATP-binding ABC transporter protein YP_416163.1 733697 D 273036 CDS YP_416164.1 82750423 3792958 735592..737373 1 NC_007622.1 ATP-dependent DNA helicase 737373 3792958 SAB0670 Staphylococcus aureus RF122 ATP-dependent DNA helicase YP_416164.1 735592 D 273036 CDS YP_416165.1 82750424 3792959 737595..738572 1 NC_007622.1 glycine betaine/carnitine/choline ATP-binding ABC transport protein 738572 3792959 SAB0671 Staphylococcus aureus RF122 glycine betaine/carnitine/choline ATP-binding ABC transport protein YP_416165.1 737595 D 273036 CDS YP_416166.1 82750425 3792960 738565..740079 1 NC_007622.1 glycine betaine/carnitine/choline ATP-binding ABC transport protein 740079 3792960 SAB0672 Staphylococcus aureus RF122 glycine betaine/carnitine/choline ATP-binding ABC transport protein YP_416166.1 738565 D 273036 CDS YP_416167.1 82750426 3792961 740318..741376 1 NC_007622.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 741376 3792961 SAB0673 Staphylococcus aureus RF122 histidinol-phosphate aminotransferase YP_416167.1 740318 D 273036 CDS YP_416168.1 82750427 3792962 741534..742076 1 NC_007622.1 hypothetical protein 742076 3792962 SAB0674 Staphylococcus aureus RF122 hypothetical protein YP_416168.1 741534 D 273036 CDS YP_416169.1 82750428 3792963 complement(742682..743599) 1 NC_007622.1 multidrug resistance protein 743599 3792963 SAB0675c Staphylococcus aureus RF122 multidrug resistance protein YP_416169.1 742682 R 273036 CDS YP_416170.1 82750429 3792964 complement(743881..745386) 1 NC_007622.1 peptide ABC transporter 745386 3792964 SAB0676c Staphylococcus aureus RF122 peptide ABC transporter YP_416170.1 743881 R 273036 CDS YP_416171.1 82750430 3792965 complement(745469..745696) 1 NC_007622.1 hypothetical protein 745696 3792965 SAB0677c Staphylococcus aureus RF122 hypothetical protein YP_416171.1 745469 R 273036 CDS YP_416172.1 82750431 3792966 complement(745726..746226) 1 NC_007622.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 746226 3792966 SAB0678c Staphylococcus aureus RF122 7-cyano-7-deazaguanine reductase YP_416172.1 745726 R 273036 CDS YP_416173.1 82750432 3792967 complement(746246..747112) 1 NC_007622.1 hypothetical protein 747112 3792967 SAB0679c Staphylococcus aureus RF122 hypothetical protein YP_416173.1 746246 R 273036 CDS YP_416174.1 82750433 3792968 747497..747763 1 NC_007622.1 hypothetical protein 747763 3792968 SAB0680 Staphylococcus aureus RF122 hypothetical protein YP_416174.1 747497 D 273036 CDS YP_416175.1 82750434 3792969 747913..748311 1 NC_007622.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 748311 nrdI 3792969 nrdI Staphylococcus aureus RF122 ribonucleotide reductase stimulatory protein YP_416175.1 747913 D 273036 CDS YP_416176.1 82750435 3793099 748283..750379 1 NC_007622.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 750379 rir1 3793099 rir1 Staphylococcus aureus RF122 ribonucleotide-diphosphate reductase subunit alpha YP_416176.1 748283 D 273036 CDS YP_416177.1 82750436 3793100 750497..751468 1 NC_007622.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 751468 nrdF 3793100 nrdF Staphylococcus aureus RF122 ribonucleotide-diphosphate reductase subunit beta YP_416177.1 750497 D 273036 CDS YP_416178.1 82750437 3792970 751533..751733 1 NC_007622.1 hypothetical protein 751733 3792970 SAB0684 Staphylococcus aureus RF122 hypothetical protein YP_416178.1 751533 D 273036 CDS YP_416179.1 82750438 3793311 752103..753074 1 NC_007622.1 FecCD family ferrichrome transporter permease 753074 sstA 3793311 sstA Staphylococcus aureus RF122 FecCD family ferrichrome transporter permease YP_416179.1 752103 D 273036 CDS YP_416180.1 82750439 3793312 753086..754018 1 NC_007622.1 FecCD family ferrichrome ATP-binding ABC transporter 754018 sstB 3793312 sstB Staphylococcus aureus RF122 FecCD family ferrichrome ATP-binding ABC transporter YP_416180.1 753086 D 273036 CDS YP_416181.1 82750440 3793314 754893..755894 1 NC_007622.1 ferrichrome ABC transporter lipoprotein 755894 sstD 3793314 sstD Staphylococcus aureus RF122 ferrichrome ABC transporter lipoprotein YP_416181.1 754893 D 273036 CDS YP_416182.1 82750441 3792971 complement(756155..756469) 1 NC_007622.1 hypothetical protein 756469 3792971 SAB0689c Staphylococcus aureus RF122 hypothetical protein YP_416182.1 756155 R 273036 CDS YP_416183.1 82750442 3792972 complement(756487..757410) 1 NC_007622.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 757410 murB 3792972 murB Staphylococcus aureus RF122 UDP-N-acetylenolpyruvoylglucosamine reductase YP_416183.1 756487 R 273036 CDS YP_416184.1 82750443 3792973 complement(757537..758055) 1 NC_007622.1 hypothetical protein 758055 3792973 SAB0691c Staphylococcus aureus RF122 hypothetical protein YP_416184.1 757537 R 273036 CDS YP_416185.1 82750444 3792974 758151..759041 1 NC_007622.1 hypothetical protein 759041 3792974 SAB0692 Staphylococcus aureus RF122 hypothetical protein YP_416185.1 758151 D 273036 CDS YP_416186.1 82750445 3792975 759206..759526 1 NC_007622.1 hypothetical protein 759526 3792975 SAB0693 Staphylococcus aureus RF122 hypothetical protein YP_416186.1 759206 D 273036 CDS YP_416187.1 82750446 3792976 759949..761073 1 NC_007622.1 glycerate kinase 761073 3792976 SAB0694 Staphylococcus aureus RF122 glycerate kinase YP_416187.1 759949 D 273036 CDS YP_416188.1 82750447 3794463 complement(761262..762488) 1 NC_007622.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 762488 pepT 3794463 pepT Staphylococcus aureus RF122 peptidase T YP_416188.1 761262 R 273036 CDS YP_416189.1 82750448 3793907 complement(762502..762996) 1 NC_007622.1 hypothetical protein 762996 3793907 SAB0696c Staphylococcus aureus RF122 hypothetical protein YP_416189.1 762502 R 273036 CDS YP_416190.1 82750449 3793908 complement(763014..763775) 1 NC_007622.1 hypothetical protein 763775 3793908 SAB0697c Staphylococcus aureus RF122 hypothetical protein YP_416190.1 763014 R 273036 CDS YP_416191.1 82750450 3793909 complement(763971..765041) 1 NC_007622.1 hypothetical protein 765041 3793909 SAB0698c Staphylococcus aureus RF122 hypothetical protein YP_416191.1 763971 R 273036 CDS YP_416192.1 82750451 3793910 765359..766414 1 NC_007622.1 lipophilic regulator protein 766414 3793910 SAB0699 Staphylococcus aureus RF122 lipophilic regulator protein YP_416192.1 765359 D 273036 CDS YP_416193.1 82750452 3793911 complement(766586..767227) 1 NC_007622.1 hypothetical protein 767227 3793911 SAB0700c Staphylococcus aureus RF122 hypothetical protein YP_416193.1 766586 R 273036 CDS YP_416194.1 82750453 3793912 767371..768237 1 NC_007622.1 hypothetical protein 768237 3793912 SAB0701 Staphylococcus aureus RF122 hypothetical protein YP_416194.1 767371 D 273036 CDS YP_416195.1 82750454 3794841 768601..769680 1 NC_007622.1 late competence operon protein FA 769680 comFA 3794841 comFA Staphylococcus aureus RF122 late competence operon protein FA YP_416195.1 768601 D 273036 CDS YP_416196.1 82750455 3794842 769670..770347 1 NC_007622.1 hypothetical protein 770347 comFC 3794842 comFC Staphylococcus aureus RF122 hypothetical protein YP_416196.1 769670 D 273036 CDS YP_416197.1 82750456 3793913 770408..770980 1 NC_007622.1 hypothetical protein 770980 3793913 SAB0704 Staphylococcus aureus RF122 hypothetical protein YP_416197.1 770408 D 273036 CDS YP_416198.1 82750457 3793187 771394..773925 1 NC_007622.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 773925 secA 3793187 secA Staphylococcus aureus RF122 preprotein translocase subunit SecA YP_416198.1 771394 D 273036 CDS YP_416199.1 82750458 3794031 774358..775350 1 NC_007622.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 775350 prfB 3794031 prfB Staphylococcus aureus RF122 peptide chain release factor 2 YP_416199.1 774358 D 273036 CDS YP_416200.1 82750459 3793914 775800..776813 1 NC_007622.1 similar to S. epidermidis transposase sequence; transposase 776813 3793914 SAB0707 Staphylococcus aureus RF122 transposase YP_416200.1 775800 D 273036 CDS YP_416201.1 82750460 3793915 777675..778475 1 NC_007622.1 hypothetical protein 778475 3793915 SAB0708 Staphylococcus aureus RF122 hypothetical protein YP_416201.1 777675 D 273036 CDS YP_416202.1 82750461 3793916 778631..779299 1 NC_007622.1 hypothetical protein 779299 3793916 SAB0709 Staphylococcus aureus RF122 hypothetical protein YP_416202.1 778631 D 273036 CDS YP_416203.1 82750462 3793917 779296..779532 1 NC_007622.1 hypothetical protein 779532 3793917 SAB0710 Staphylococcus aureus RF122 hypothetical protein YP_416203.1 779296 D 273036 CDS YP_416204.1 82750463 3794170 779795..781786 1 NC_007622.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 781786 uvrB 3794170 uvrB Staphylococcus aureus RF122 excinuclease ABC subunit B YP_416204.1 779795 D 273036 CDS YP_416205.1 82750464 3794169 781794..784640 1 NC_007622.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 784640 uvrA 3794169 uvrA Staphylococcus aureus RF122 excinuclease ABC subunit A YP_416205.1 781794 D 273036 CDS YP_416206.1 82750465 3794086 785133..786065 1 NC_007622.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 786065 hprK 3794086 hprK Staphylococcus aureus RF122 HPr kinase/phosphorylase YP_416206.1 785133 D 273036 CDS YP_416207.1 82750466 3794809 786071..786910 1 NC_007622.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 786910 lgt 3794809 lgt Staphylococcus aureus RF122 prolipoprotein diacylglyceryl transferase YP_416207.1 786071 D 273036 CDS YP_416208.1 82750467 3793918 786918..787403 1 NC_007622.1 acetyltransferase 787403 3793918 SAB0715 Staphylococcus aureus RF122 acetyltransferase YP_416208.1 786918 D 273036 CDS YP_416209.1 82750468 3793919 787411..788850 1 NC_007622.1 hypothetical protein 788850 3793919 SAB0716 Staphylococcus aureus RF122 hypothetical protein YP_416209.1 787411 D 273036 CDS YP_416210.1 82750469 3795129 788917..789852 1 NC_007622.1 thioredoxin reductase 789852 trxB 3795129 trxB Staphylococcus aureus RF122 thioredoxin reductase YP_416210.1 788917 D 273036 CDS YP_416211.1 82750470 3793920 complement(790024..790410) 1 NC_007622.1 hypothetical protein 790410 3793920 SAB0718c Staphylococcus aureus RF122 hypothetical protein YP_416211.1 790024 R 273036 CDS YP_416212.1 82750471 3793921 790617..791528 1 NC_007622.1 hypothetical protein 791528 3793921 SAB0719 Staphylococcus aureus RF122 hypothetical protein YP_416212.1 790617 D 273036 CDS YP_416213.1 82750472 3793922 791525..792520 1 NC_007622.1 hypothetical protein 792520 3793922 SAB0720 Staphylococcus aureus RF122 hypothetical protein YP_416213.1 791525 D 273036 CDS YP_416214.1 82750473 3793923 792631..793575 1 NC_007622.1 hypothetical protein 793575 3793923 SAB0721 Staphylococcus aureus RF122 hypothetical protein YP_416214.1 792631 D 273036 CDS YP_416215.1 82750474 3794835 794138..794725 1 NC_007622.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 794725 clpP 3794835 clpP Staphylococcus aureus RF122 ATP-dependent Clp protease proteolytic subunit YP_416215.1 794138 D 273036 CDS YP_416216.1 82750475 3793924 794908..796542 1 NC_007622.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 796542 3793924 SAB0723 Staphylococcus aureus RF122 malate dehydrogenase YP_416216.1 794908 D 273036 CDS YP_416217.1 82750476 3793925 complement(796749..797651) 1 NC_007622.1 hypothetical protein 797651 3793925 SAB0724c Staphylococcus aureus RF122 hypothetical protein YP_416217.1 796749 R 273036 CDS YP_416218.1 82750477 3793926 797835..797993 1 NC_007622.1 hypothetical protein 797993 3793926 SAB0725 Staphylococcus aureus RF122 hypothetical protein YP_416218.1 797835 D 273036 CDS YP_416219.1 82750478 3793796 798354..798983 1 NC_007622.1 hypothetical protein 798983 3793796 SAB0726 Staphylococcus aureus RF122 hypothetical protein YP_416219.1 798354 D 273036 CDS YP_416220.1 82750479 3794351 799532..800545 1 NC_007622.1 glycolytic operon regulator 800545 gapR 3794351 gapR Staphylococcus aureus RF122 glycolytic operon regulator YP_416220.1 799532 D 273036 CDS YP_416221.1 82750480 3794349 800598..801608 1 NC_007622.1 glyceraldehyde-3-phosphate dehydrogenase 801608 gap 3794349 gap Staphylococcus aureus RF122 glyceraldehyde-3-phosphate dehydrogenase YP_416221.1 800598 D 273036 CDS YP_416222.1 82750481 3794466 801747..802937 1 NC_007622.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 802937 pgk 3794466 pgk Staphylococcus aureus RF122 phosphoglycerate kinase YP_416222.1 801747 D 273036 CDS YP_416223.1 82750482 3794333 803059..803820 1 NC_007622.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 803820 tpiA 3794333 tpiA Staphylococcus aureus RF122 triosephosphate isomerase YP_416223.1 803059 D 273036 CDS YP_416224.1 82750483 3794467 803823..805340 1 NC_007622.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 805340 pgm 3794467 pgm Staphylococcus aureus RF122 phosphoglyceromutase YP_416224.1 803823 D 273036 CDS YP_416225.1 82750484 3793356 805470..806774 1 NC_007622.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 806774 eno 3793356 eno Staphylococcus aureus RF122 phosphopyruvate hydratase YP_416225.1 805470 D 273036 CDS YP_416226.1 82750485 3793797 807114..807572 1 NC_007622.1 hypothetical protein 807572 3793797 SAB0733 Staphylococcus aureus RF122 hypothetical protein YP_416226.1 807114 D 273036 CDS YP_416227.1 82750486 3793798 807639..807872 1 NC_007622.1 preprotein translocase subunit SecG 807872 secG 3793798 secG Staphylococcus aureus RF122 preprotein translocase subunit SecG YP_416227.1 807639 D 273036 CDS YP_416228.1 82750487 3793799 808001..808741 1 NC_007622.1 carboxylesterase precursor 808741 3793799 SAB0735 Staphylococcus aureus RF122 carboxylesterase precursor YP_416228.1 808001 D 273036 CDS YP_416229.1 82750488 3793103 808775..811147 1 NC_007622.1 ribonuclease R 811147 rnr 3793103 rnr Staphylococcus aureus RF122 ribonuclease R YP_416229.1 808775 D 273036 CDS YP_416230.1 82750489 3793000 811169..811633 1 NC_007622.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 811633 smpB 3793000 smpB Staphylococcus aureus RF122 SsrA-binding protein YP_416230.1 811169 D 273036 CDS YP_416231.1 82750490 3793800 812335..812604 1 NC_007622.1 transposase 812604 3793800 SAB0738 Staphylococcus aureus RF122 transposase YP_416231.1 812335 D 273036 CDS YP_416232.1 82750491 3793801 812840..813385 1 NC_007622.1 hypothetical protein 813385 3793801 SAB0739 Staphylococcus aureus RF122 hypothetical protein YP_416232.1 812840 D 273036 CDS YP_416233.1 82750492 3793802 813995..814930 1 NC_007622.1 hypothetical protein 814930 3793802 SAB0740 Staphylococcus aureus RF122 hypothetical protein YP_416233.1 813995 D 273036 CDS YP_416234.1 82750493 3793803 complement(815114..815830) 1 NC_007622.1 hypothetical protein 815830 3793803 SAB0741c Staphylococcus aureus RF122 hypothetical protein YP_416234.1 815114 R 273036 CDS YP_416235.1 82750494 3793804 816441..816962 1 NC_007622.1 hypothetical protein 816962 3793804 SAB0742 Staphylococcus aureus RF122 hypothetical protein YP_416235.1 816441 D 273036 CDS YP_416236.1 82750495 3793805 817101..817631 1 NC_007622.1 hypothetical protein 817631 3793805 SAB0743 Staphylococcus aureus RF122 hypothetical protein YP_416236.1 817101 D 273036 CDS YP_416237.1 82750496 3794830 817944..820631 1 NC_007622.1 truncated clumping factor 820631 clfA 3794830 clfA Staphylococcus aureus RF122 truncated clumping factor YP_416237.1 817944 D 273036 CDS YP_416238.1 82750497 3793806 820852..822351 1 NC_007622.1 secreted von Willebrand factor-binding protein precursor 822351 3793806 SAB0745 Staphylococcus aureus RF122 secreted von Willebrand factor-binding protein precursor YP_416238.1 820852 D 273036 CDS YP_416239.1 82750498 3793807 822702..823721 1 NC_007622.1 extracellular matrix and plasma binding protein precursor 823721 3793807 SAB0746 Staphylococcus aureus RF122 extracellular matrix and plasma binding protein precursor YP_416239.1 822702 D 273036 CDS YP_416240.1 82750499 3793808 824056..824565 1 NC_007622.1 hypothetical protein 824565 3793808 SAB0747 Staphylococcus aureus RF122 hypothetical protein YP_416240.1 824056 D 273036 CDS YP_416241.1 82750500 3793626 824906..825592 1 NC_007622.1 thermonuclease precursor 825592 nuc 3793626 nuc Staphylococcus aureus RF122 thermonuclease precursor YP_416241.1 824906 D 273036 CDS YP_416242.1 82750501 3795277 825949..826149 1 NC_007622.1 cold-shock protein C 826149 cspC 3795277 cspC Staphylococcus aureus RF122 cold-shock protein C YP_416242.1 825949 D 273036 CDS YP_416243.1 82750502 3793809 complement(826644..826862) 1 NC_007622.1 hypothetical protein 826862 3793809 SAB0750c Staphylococcus aureus RF122 hypothetical protein YP_416243.1 826644 R 273036 CDS YP_416244.1 82750503 3793810 complement(826924..827208) 1 NC_007622.1 hypothetical protein 827208 3793810 SAB0751c Staphylococcus aureus RF122 hypothetical protein YP_416244.1 826924 R 273036 CDS YP_416245.1 82750504 3793811 complement(827296..827865) 1 NC_007622.1 hypothetical protein 827865 3793811 SAB0752c Staphylococcus aureus RF122 hypothetical protein YP_416245.1 827296 R 273036 CDS YP_416246.1 82750505 3793812 complement(828053..828241) 1 NC_007622.1 hypothetical protein 828241 3793812 SAB0753c Staphylococcus aureus RF122 hypothetical protein YP_416246.1 828053 R 273036 CDS YP_416247.1 82750506 3793813 complement(828270..828539) 1 NC_007622.1 hypothetical protein 828539 3793813 SAB0754c Staphylococcus aureus RF122 hypothetical protein YP_416247.1 828270 R 273036 CDS YP_416248.1 82750507 3793814 complement(829071..829313) 1 NC_007622.1 hypothetical protein 829313 3793814 SAB0755c Staphylococcus aureus RF122 hypothetical protein YP_416248.1 829071 R 273036 CDS YP_416249.1 82750508 3793544 829532..830113 1 NC_007622.1 phosphoglycerate mutase 830113 3793544 SAB0756 Staphylococcus aureus RF122 phosphoglycerate mutase YP_416249.1 829532 D 273036 CDS YP_416250.1 82750509 3793545 complement(830186..830803) 1 NC_007622.1 lysE type translocator protein 830803 3793545 SAB0757c Staphylococcus aureus RF122 lysE type translocator protein YP_416250.1 830186 R 273036 CDS YP_416251.1 82750510 3793546 complement(830959..831453) 1 NC_007622.1 hypothetical protein 831453 3793546 SAB0758c Staphylococcus aureus RF122 hypothetical protein YP_416251.1 830959 R 273036 CDS YP_416252.1 82750511 3793547 complement(831851..832273) 1 NC_007622.1 hypothetical protein 832273 3793547 SAB0759c Staphylococcus aureus RF122 hypothetical protein YP_416252.1 831851 R 273036 CDS YP_416253.1 82750512 3793548 832421..833137 1 NC_007622.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 833137 3793548 SAB0760 Staphylococcus aureus RF122 3-dehydroquinate dehydratase YP_416253.1 832421 D 273036 CDS YP_416254.1 82750513 3793549 833220..833759 1 NC_007622.1 hypothetical protein 833759 3793549 SAB0761 Staphylococcus aureus RF122 hypothetical protein YP_416254.1 833220 D 273036 CDS YP_416255.1 82750514 3793550 complement(833908..834228) 1 NC_007622.1 thioredoxin 834228 3793550 SAB0762c Staphylococcus aureus RF122 thioredoxin YP_416255.1 833908 R 273036 CDS YP_416256.1 82750515 3793551 834372..834728 1 NC_007622.1 hypothetical protein 834728 3793551 SAB0763 Staphylococcus aureus RF122 hypothetical protein YP_416256.1 834372 D 273036 CDS YP_416257.1 82750516 3794356 834886..835266 1 NC_007622.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 835266 gcvH 3794356 gcvH Staphylococcus aureus RF122 glycine cleavage system protein H YP_416257.1 834886 D 273036 CDS YP_416258.1 82750517 3793554 837187..837483 1 NC_007622.1 hypothetical protein 837483 3793554 SAB0767 Staphylococcus aureus RF122 hypothetical protein YP_416258.1 837187 D 273036 CDS YP_416259.1 82750518 3793555 837733..838758 1 NC_007622.1 ATP-binding ABC transporter protein 838758 3793555 SAB0768 Staphylococcus aureus RF122 ATP-binding ABC transporter protein YP_416259.1 837733 D 273036 CDS YP_416260.1 82750519 3793556 838751..839446 1 NC_007622.1 ABC transporter permease 839446 3793556 SAB0769 Staphylococcus aureus RF122 ABC transporter permease YP_416260.1 838751 D 273036 CDS YP_416261.1 82750520 3793557 839464..840285 1 NC_007622.1 substrate-binding ABC transporter protein 840285 3793557 SAB0770 Staphylococcus aureus RF122 substrate-binding ABC transporter protein YP_416261.1 839464 D 273036 CDS YP_416262.1 82750521 3793558 840567..840800 1 NC_007622.1 hypothetical protein 840800 3793558 SAB0771 Staphylococcus aureus RF122 hypothetical protein YP_416262.1 840567 D 273036 CDS YP_416263.1 82750522 3793559 840934..841128 1 NC_007622.1 sigmaB-regulated; hypothetical protein 841128 3793559 SAB0772 Staphylococcus aureus RF122 hypothetical protein YP_416263.1 840934 D 273036 CDS YP_416264.1 82750523 3793560 complement(841362..842213) 1 NC_007622.1 hypothetical protein 842213 3793560 SAB0773c Staphylococcus aureus RF122 hypothetical protein YP_416264.1 841362 R 273036 CDS YP_416265.1 82750524 3793561 842541..843302 1 NC_007622.1 ATP-binding ABC transporter protein 843302 3793561 SAB0774 Staphylococcus aureus RF122 ATP-binding ABC transporter protein YP_416265.1 842541 D 273036 CDS YP_416266.1 82750525 3793562 843400..844707 1 NC_007622.1 hypothetical protein 844707 3793562 SAB0775 Staphylococcus aureus RF122 hypothetical protein YP_416266.1 843400 D 273036 CDS YP_416267.1 82750526 3794848 844822..846063 1 NC_007622.1 cysteine desulfurase 846063 csdB 3794848 csdB Staphylococcus aureus RF122 cysteine desulfurase YP_416267.1 844822 D 273036 CDS YP_416268.1 82750527 3793563 846053..846517 1 NC_007622.1 nitrogen fixation protein 846517 3793563 SAB0777 Staphylococcus aureus RF122 nitrogen fixation protein YP_416268.1 846053 D 273036 CDS YP_416269.1 82750528 3794145 846668..848065 1 NC_007622.1 hypothetical protein 848065 3794145 SAB0778 Staphylococcus aureus RF122 hypothetical protein YP_416269.1 846668 D 273036 CDS YP_416270.1 82750529 3794146 complement(848133..848693) 1 NC_007622.1 phage-related integrase 848693 3794146 SAB0779c Staphylococcus aureus RF122 phage-related integrase YP_416270.1 848133 R 273036 CDS YP_416271.1 82750530 3794147 849355..849588 1 NC_007622.1 phage-associated holin 849588 3794147 SAB0780 Staphylococcus aureus RF122 phage-associated holin YP_416271.1 849355 D 273036 CDS YP_416272.1 82750531 3794148 849600..850355 1 NC_007622.1 lytic enzyme 850355 3794148 SAB0781 Staphylococcus aureus RF122 lytic enzyme YP_416272.1 849600 D 273036 CDS YP_416273.1 82750532 3794149 850702..851628 1 NC_007622.1 leukocidin chain lukM precursor 851628 3794149 SAB0782 Staphylococcus aureus RF122 leukocidin chain lukM precursor YP_416273.1 850702 D 273036 CDS YP_416274.1 82750533 3794150 851630..852598 1 NC_007622.1 Panton-Valentine leukocidin LukF-PV chain precursor 852598 3794150 SAB0783 Staphylococcus aureus RF122 Panton-Valentine leukocidin LukF-PV chain precursor YP_416274.1 851630 D 273036 CDS YP_416275.1 82750534 3794151 complement(853306..853512) 1 NC_007622.1 hypothetical protein 853512 3794151 SAB0784c Staphylococcus aureus RF122 hypothetical protein YP_416275.1 853306 R 273036 CDS YP_416276.1 82750535 3794152 complement(853611..853925) 1 NC_007622.1 hypothetical protein 853925 3794152 SAB0785c Staphylococcus aureus RF122 hypothetical protein YP_416276.1 853611 R 273036 CDS YP_416277.1 82750536 3794153 854290..855330 1 NC_007622.1 hypothetical protein 855330 3794153 SAB0786 Staphylococcus aureus RF122 hypothetical protein YP_416277.1 854290 D 273036 CDS YP_416278.1 82750537 3794155 856582..857430 1 NC_007622.1 hypothetical protein 857430 3794155 SAB0788 Staphylococcus aureus RF122 hypothetical protein YP_416278.1 856582 D 273036 CDS YP_416279.1 82750538 3794156 857443..858270 1 NC_007622.1 hypothetical protein 858270 3794156 SAB0789 Staphylococcus aureus RF122 hypothetical protein YP_416279.1 857443 D 273036 CDS YP_416280.1 82750539 3794157 858297..859613 1 NC_007622.1 hypothetical protein 859613 3794157 SAB0790 Staphylococcus aureus RF122 hypothetical protein YP_416280.1 858297 D 273036 CDS YP_416281.1 82750540 3794158 859697..860614 1 NC_007622.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 860614 3794158 SAB0791 Staphylococcus aureus RF122 lipoyl synthase YP_416281.1 859697 D 273036 CDS YP_416282.1 82750541 3794159 860735..861127 1 NC_007622.1 hypothetical protein 861127 3794159 SAB0792 Staphylococcus aureus RF122 hypothetical protein YP_416282.1 860735 D 273036 CDS YP_416283.1 82750542 3794160 complement(861206..861472) 1 NC_007622.1 hypothetical protein 861472 3794160 SAB0793c Staphylococcus aureus RF122 hypothetical protein YP_416283.1 861206 R 273036 CDS YP_416284.1 82750543 3794161 861570..862004 1 NC_007622.1 hypothetical protein 862004 3794161 SAB0794 Staphylococcus aureus RF122 hypothetical protein YP_416284.1 861570 D 273036 CDS YP_416285.1 82750544 3794162 862004..862783 1 NC_007622.1 4-nitrophenylphosphatase 862783 3794162 SAB0795 Staphylococcus aureus RF122 4-nitrophenylphosphatase YP_416285.1 862004 D 273036 CDS YP_416286.1 82750545 3794163 862816..863775 1 NC_007622.1 glycerate dehydrogenase 863775 3794163 SAB0796 Staphylococcus aureus RF122 glycerate dehydrogenase YP_416286.1 862816 D 273036 CDS YP_416287.1 82750546 3793679 864187..864339 1 NC_007622.1 hypothetical protein 864339 3793679 SAB0797 Staphylococcus aureus RF122 hypothetical protein YP_416287.1 864187 D 273036 CDS YP_416288.1 82750547 3794484 864355..865812 1 NC_007622.1 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 865812 dltA 3794484 dltA Staphylococcus aureus RF122 D-alanine--poly(phosphoribitol) ligase subunit 1 YP_416288.1 864355 D 273036 CDS YP_416289.1 82750548 3794485 865809..867023 1 NC_007622.1 D-alanine lipoteichoic acid and wall teichoic acid esterification protein 867023 dltB 3794485 dltB Staphylococcus aureus RF122 D-alanine lipoteichoic acid and wall teichoic acid esterification protein YP_416289.1 865809 D 273036 CDS YP_416290.1 82750549 3794486 867041..867277 1 NC_007622.1 D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 867277 dltC 3794486 dltC Staphylococcus aureus RF122 D-alanine--poly(phosphoribitol) ligase subunit 2 YP_416290.1 867041 D 273036 CDS YP_416291.1 82750550 3794487 867274..868449 1 NC_007622.1 D-alanine lipoteichoic acid and wall teichoic acid esterification secreted protein 868449 dltD 3794487 dltD Staphylococcus aureus RF122 D-alanine lipoteichoic acid and wall teichoic acid esterification secreted protein YP_416291.1 867274 D 273036 CDS YP_416292.1 82750551 3793680 complement(868712..868954) 1 NC_007622.1 hypothetical protein 868954 3793680 SAB0802c Staphylococcus aureus RF122 hypothetical protein YP_416292.1 868712 R 273036 CDS YP_416293.1 82750552 3793681 869055..869378 1 NC_007622.1 hypothetical protein 869378 3793681 SAB0803 Staphylococcus aureus RF122 hypothetical protein YP_416293.1 869055 D 273036 CDS YP_416294.1 82750553 3793682 complement(869438..870502) 1 NC_007622.1 NADH dehydrogenase 870502 3793682 SAB0804c Staphylococcus aureus RF122 NADH dehydrogenase YP_416294.1 869438 R 273036 CDS YP_416295.1 82750554 3793683 870819..871055 1 NC_007622.1 hypothetical protein 871055 3793683 SAB0805 Staphylococcus aureus RF122 hypothetical protein YP_416295.1 870819 D 273036 CDS YP_416296.1 82750555 3793684 871068..871427 1 NC_007622.1 hypothetical protein 871427 3793684 SAB0806 Staphylococcus aureus RF122 hypothetical protein YP_416296.1 871068 D 273036 CDS YP_416297.1 82750556 3793685 871881..873089 1 NC_007622.1 NADH dehydrogenase 873089 3793685 SAB0807 Staphylococcus aureus RF122 NADH dehydrogenase YP_416297.1 871881 D 273036 CDS YP_416298.1 82750557 3793686 873220..874695 1 NC_007622.1 cytosol aminopeptidase 874695 3793686 SAB0808 Staphylococcus aureus RF122 cytosol aminopeptidase YP_416298.1 873220 D 273036 CDS YP_416299.1 82750558 3793687 875106..876422 1 NC_007622.1 transporter protein 876422 3793687 SAB0809 Staphylococcus aureus RF122 transporter protein YP_416299.1 875106 D 273036 CDS YP_416300.1 82750559 3793688 876441..876815 1 NC_007622.1 hypothetical protein 876815 3793688 SAB0810 Staphylococcus aureus RF122 hypothetical protein YP_416300.1 876441 D 273036 CDS YP_416301.1 82750560 3793690 complement(878382..879536) 1 NC_007622.1 hypothetical protein 879536 3793690 SAB0812c Staphylococcus aureus RF122 hypothetical protein YP_416301.1 878382 R 273036 CDS YP_416302.1 82750561 3792988 complement(879799..880155) 1 NC_007622.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 880155 mnhG 3792988 mnhG Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit G YP_416302.1 879799 R 273036 CDS YP_416303.1 82750562 3792987 complement(880133..880426) 1 NC_007622.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 880426 mnhF 3792987 mnhF Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit F YP_416303.1 880133 R 273036 CDS YP_416304.1 82750563 3792986 complement(880426..880905) 1 NC_007622.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 880905 mnhE 3792986 mnhE Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit E YP_416304.1 880426 R 273036 CDS YP_416305.1 82750564 3792985 complement(880907..882403) 1 NC_007622.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 882403 mnhD 3792985 mnhD Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit D YP_416305.1 880907 R 273036 CDS YP_416306.1 82750565 3792983 complement(882396..882737) 1 NC_007622.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 882737 mnhC 3792983 mnhC Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit C YP_416306.1 882396 R 273036 CDS YP_416307.1 82750566 3792984 complement(882737..883165) 1 NC_007622.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit B 883165 mnhC 3792984 mnhC Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit B YP_416307.1 882737 R 273036 CDS YP_416308.1 82750567 3792982 complement(883158..885563) 1 NC_007622.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 885563 mnhA 3792982 mnhA Staphylococcus aureus RF122 monovalent cation/H+ antiporter subunit A YP_416308.1 883158 R 273036 CDS YP_416309.1 82750568 3793691 complement(885694..886077) 1 NC_007622.1 hypothetical protein 886077 3793691 SAB0820c Staphylococcus aureus RF122 hypothetical protein YP_416309.1 885694 R 273036 CDS YP_416310.1 82750569 3793692 886141..886734 1 NC_007622.1 peptidyl-prolyl cis-trans isomerase 886734 3793692 SAB0821 Staphylococcus aureus RF122 peptidyl-prolyl cis-trans isomerase YP_416310.1 886141 D 273036 CDS YP_416311.1 82750570 3793693 887150..887527 1 NC_007622.1 hypothetical protein 887527 3793693 SAB0822 Staphylococcus aureus RF122 hypothetical protein YP_416311.1 887150 D 273036 CDS YP_416312.1 82750571 3793694 887888..889015 1 NC_007622.1 NADH-dependent flavin oxidoreductase 889015 3793694 SAB0823 Staphylococcus aureus RF122 NADH-dependent flavin oxidoreductase YP_416312.1 887888 D 273036 CDS YP_416313.1 82750572 3793104 889323..890513 1 NC_007622.1 ornithine--oxo-acid transaminase 890513 rocD 3793104 rocD Staphylococcus aureus RF122 ornithine--oxo-acid transaminase YP_416313.1 889323 D 273036 CDS YP_416314.1 82750573 3793695 890622..891866 1 NC_007622.1 NAD-specific glutamate dehydrogenase 891866 3793695 SAB0825 Staphylococcus aureus RF122 NAD-specific glutamate dehydrogenase YP_416314.1 890622 D 273036 CDS YP_416315.1 82750574 3793696 complement(891975..892103) 1 NC_007622.1 hypothetical protein 892103 3793696 SAB0826c Staphylococcus aureus RF122 hypothetical protein YP_416315.1 891975 R 273036 CDS YP_416316.1 82750575 3793654 complement(892203..893132) 1 NC_007622.1 glycerophosphoryl diester phosphodiesterase 893132 glpQ 3793654 glpQ Staphylococcus aureus RF122 glycerophosphoryl diester phosphodiesterase YP_416316.1 892203 R 273036 CDS YP_416317.1 82750576 3794945 complement(893374..894753) 1 NC_007622.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 894753 argH 3794945 argH Staphylococcus aureus RF122 argininosuccinate lyase YP_416317.1 893374 R 273036 CDS YP_416318.1 82750577 3794944 complement(894743..895948) 1 NC_007622.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 895948 argG 3794944 argG Staphylococcus aureus RF122 argininosuccinate synthase YP_416318.1 894743 R 273036 CDS YP_416319.1 82750578 3793697 896299..897630 1 NC_007622.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 897630 pgi 3793697 pgi Staphylococcus aureus RF122 glucose-6-phosphate isomerase YP_416319.1 896299 D 273036 CDS YP_416320.1 82750579 3793698 898015..898200 1 NC_007622.1 hypothetical protein 898200 3793698 SAB0831 Staphylococcus aureus RF122 hypothetical protein YP_416320.1 898015 D 273036 CDS YP_416321.1 82750580 3793485 898503..899078 1 NC_007622.1 hypothetical protein 899078 3793485 SAB0832 Staphylococcus aureus RF122 hypothetical protein YP_416321.1 898503 D 273036 CDS YP_416322.1 82750581 3793008 899083..899607 1 NC_007622.1 type-I signal peptidase 899607 spsA 3793008 spsA Staphylococcus aureus RF122 type-I signal peptidase YP_416322.1 899083 D 273036 CDS YP_416323.1 82750582 3793009 899623..900198 1 NC_007622.1 type-I signal peptidase 900198 spsB 3793009 spsB Staphylococcus aureus RF122 type-I signal peptidase YP_416323.1 899623 D 273036 CDS YP_416324.1 82750583 3793486 900358..903834 1 NC_007622.1 ATP-dependent nuclease subunit B 903834 3793486 SAB0835 Staphylococcus aureus RF122 ATP-dependent nuclease subunit B YP_416324.1 900358 D 273036 CDS YP_416325.1 82750584 3793487 903835..907488 1 NC_007622.1 ATP-dependent nuclease subunit A 907488 3793487 SAB0836 Staphylococcus aureus RF122 ATP-dependent nuclease subunit A YP_416325.1 903835 D 273036 CDS YP_416326.1 82750585 3793488 907654..908556 1 NC_007622.1 fumarylacetoacetate hydrolase family protein 908556 3793488 SAB0837 Staphylococcus aureus RF122 fumarylacetoacetate hydrolase family protein YP_416326.1 907654 D 273036 CDS YP_416327.1 82750586 3793489 908882..909271 1 NC_007622.1 hypothetical protein 909271 3793489 SAB0838 Staphylococcus aureus RF122 hypothetical protein YP_416327.1 908882 D 273036 CDS YP_416328.1 82750587 3793490 complement(909442..910758) 1 NC_007622.1 NADPH-dependent; catalyzes the reduction of coenzyme A disulfide; coenzyme A disulfide reductase 910758 3793490 SAB0839c Staphylococcus aureus RF122 coenzyme A disulfide reductase YP_416328.1 909442 R 273036 CDS YP_416329.1 82750588 3793491 complement(910810..911634) 1 NC_007622.1 hydrolase 911634 3793491 SAB0840c Staphylococcus aureus RF122 hydrolase YP_416329.1 910810 R 273036 CDS YP_416330.1 82750589 3793492 911748..912056 1 NC_007622.1 hypothetical protein 912056 3793492 SAB0841 Staphylococcus aureus RF122 hypothetical protein YP_416330.1 911748 D 273036 CDS YP_416331.1 82750590 3794832 914712..917321 1 NC_007622.1 ATP-dependent protease protein 917321 clpB 3794832 clpB Staphylococcus aureus RF122 ATP-dependent protease protein YP_416331.1 914712 D 273036 CDS YP_416332.1 82750591 3793494 complement(917380..918249) 1 NC_007622.1 LysR family regulatory protein 918249 3793494 SAB0844c Staphylococcus aureus RF122 LysR family regulatory protein YP_416332.1 917380 R 273036 CDS YP_416333.1 82750592 3793495 918442..918894 1 NC_007622.1 hypothetical protein 918894 3793495 SAB0845 Staphylococcus aureus RF122 hypothetical protein YP_416333.1 918442 D 273036 CDS YP_416334.1 82750593 3793496 919205..919639 1 NC_007622.1 hypothetical protein 919639 3793496 SAB0846 Staphylococcus aureus RF122 hypothetical protein YP_416334.1 919205 D 273036 CDS YP_416335.1 82750594 3793497 919819..920133 1 NC_007622.1 hypothetical protein 920133 3793497 SAB0847 Staphylococcus aureus RF122 hypothetical protein YP_416335.1 919819 D 273036 CDS YP_416336.1 82750595 3793361 920376..921317 1 NC_007622.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 921317 fabH 3793361 fabH Staphylococcus aureus RF122 3-oxoacyl-(acyl carrier protein) synthase III YP_416336.1 920376 D 273036 CDS YP_416337.1 82750596 3793359 921329..922573 1 NC_007622.1 3-oxoacyl-ACP synthase II 922573 fabF 3793359 fabF Staphylococcus aureus RF122 3-oxoacyl-ACP synthase II YP_416337.1 921329 D 273036 CDS YP_416338.1 82750597 3793498 complement(922627..923943) 1 NC_007622.1 transposase 923943 3793498 SAB0850c Staphylococcus aureus RF122 transposase YP_416338.1 922627 R 273036 CDS YP_416339.1 82750598 3793499 complement(924142..924513) 1 NC_007622.1 hypothetical protein 924513 3793499 SAB0851c Staphylococcus aureus RF122 hypothetical protein YP_416339.1 924142 R 273036 CDS YP_416340.1 82750599 3793638 924756..925682 1 NC_007622.1 peptide ABC transporter permease 925682 oppB 3793638 oppB Staphylococcus aureus RF122 peptide ABC transporter permease YP_416340.1 924756 D 273036 CDS YP_416341.1 82750600 3793639 925682..926752 1 NC_007622.1 peptide ABC transporter permease 926752 oppC 3793639 oppC Staphylococcus aureus RF122 peptide ABC transporter permease YP_416341.1 925682 D 273036 CDS YP_416342.1 82750601 3794105 926768..927850 1 NC_007622.1 peptide ABC transporter ATP-binding protein 927850 oppD 3794105 oppD Staphylococcus aureus RF122 peptide ABC transporter ATP-binding protein YP_416342.1 926768 D 273036 CDS YP_416343.1 82750602 3794106 927840..928781 1 NC_007622.1 peptide ABC transporter ATP-binding protein 928781 oppF 3794106 oppF Staphylococcus aureus RF122 peptide ABC transporter ATP-binding protein YP_416343.1 927840 D 273036 CDS YP_416344.1 82750603 3793500 928800..930455 1 NC_007622.1 oligopeptide binding protein 930455 3793500 SAB0856 Staphylococcus aureus RF122 oligopeptide binding protein YP_416344.1 928800 D 273036 CDS YP_416345.1 82750604 3793501 930624..931559 1 NC_007622.1 peptide ABC transporter permease 931559 3793501 SAB0857 Staphylococcus aureus RF122 peptide ABC transporter permease YP_416345.1 930624 D 273036 CDS YP_416346.1 82750605 3793502 931549..932568 1 NC_007622.1 peptide ABC transporter permease 932568 3793502 SAB0858 Staphylococcus aureus RF122 peptide ABC transporter permease YP_416346.1 931549 D 273036 CDS YP_416347.1 82750606 3793503 932654..933664 1 NC_007622.1 peptide ABC transporter ATP-binding protein 933664 3793503 SAB0859 Staphylococcus aureus RF122 peptide ABC transporter ATP-binding protein YP_416347.1 932654 D 273036 CDS YP_416348.1 82750607 3794900 933654..934574 1 NC_007622.1 peptide ABC transporter ATP-binding protein 934574 appD 3794900 appD Staphylococcus aureus RF122 peptide ABC transporter ATP-binding protein YP_416348.1 933654 D 273036 CDS YP_416349.1 82750608 3792881 934603..935457 1 NC_007622.1 oligopeptide ATP-binding protein 935457 3792881 SAB0861 Staphylococcus aureus RF122 oligopeptide ATP-binding protein YP_416349.1 934603 D 273036 CDS YP_416350.1 82750609 3795126 complement(936344..937333) 1 NC_007622.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 937333 trpS 3795126 trpS Staphylococcus aureus RF122 tryptophanyl-tRNA synthetase YP_416350.1 936344 R 273036 CDS YP_416351.2 161777621 3792883 937628..938023 1 NC_007622.1 the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; Spx family transcriptional regulator 938023 spxA 3792883 spxA Staphylococcus aureus RF122 Spx family transcriptional regulator YP_416351.2 937628 D 273036 CDS YP_416352.1 82750611 3792884 938394..939113 1 NC_007622.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 939113 3792884 SAB0865 Staphylococcus aureus RF122 adaptor protein YP_416352.1 938394 D 273036 CDS YP_416353.1 82750612 3792885 939233..940219 1 NC_007622.1 competence-related protein 940219 3792885 SAB0866 Staphylococcus aureus RF122 competence-related protein YP_416353.1 939233 D 273036 CDS YP_416354.1 82750613 3794462 940267..942075 1 NC_007622.1 thimet oligopeptidase 942075 pepB 3794462 pepB Staphylococcus aureus RF122 thimet oligopeptidase YP_416354.1 940267 D 273036 CDS YP_416355.1 82750614 3792886 complement(942535..943320) 1 NC_007622.1 hypothetical protein 943320 3792886 SAB0868c Staphylococcus aureus RF122 hypothetical protein YP_416355.1 942535 R 273036 CDS YP_416356.1 82750615 3792887 complement(943364..943729) 1 NC_007622.1 hypothetical protein 943729 3792887 SAB0869c Staphylococcus aureus RF122 hypothetical protein YP_416356.1 943364 R 273036 CDS YP_416357.1 82750616 3792888 complement(943833..944426) 1 NC_007622.1 hypothetical protein 944426 3792888 SAB0870c Staphylococcus aureus RF122 hypothetical protein YP_416357.1 943833 R 273036 CDS YP_416358.1 82750617 3792889 944612..944959 1 NC_007622.1 hypothetical protein 944959 3792889 SAB0871 Staphylococcus aureus RF122 hypothetical protein YP_416358.1 944612 D 273036 CDS YP_416359.1 82750618 3792890 944976..945611 1 NC_007622.1 GTP pyrophosphokinase 945611 3792890 SAB0872 Staphylococcus aureus RF122 GTP pyrophosphokinase YP_416359.1 944976 D 273036 CDS YP_416360.1 82750619 3792891 945628..946437 1 NC_007622.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 946437 ppnK 3792891 ppnK Staphylococcus aureus RF122 inorganic polyphosphate/ATP-NAD kinase YP_416360.1 945628 D 273036 CDS YP_416361.1 82750620 3792892 946434..947288 1 NC_007622.1 RNA pseudoridylate synthase 947288 3792892 SAB0874 Staphylococcus aureus RF122 RNA pseudoridylate synthase YP_416361.1 946434 D 273036 CDS YP_416362.1 82750621 3792893 947309..948694 1 NC_007622.1 magnesium transporter 948694 3792893 SAB0875 Staphylococcus aureus RF122 magnesium transporter YP_416362.1 947309 D 273036 CDS YP_416363.1 82750622 3792894 948704..950548 1 NC_007622.1 Na+/H+ antiporter 950548 3792894 SAB0876 Staphylococcus aureus RF122 Na+/H+ antiporter YP_416363.1 948704 D 273036 CDS YP_416364.1 82750623 3793362 950826..951596 1 NC_007622.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 951596 fabI 3793362 fabI Staphylococcus aureus RF122 enoyl-(acyl carrier protein) reductase YP_416364.1 950826 D 273036 CDS YP_416365.1 82750624 3792895 complement(951790..952875) 1 NC_007622.1 hypothetical protein 952875 3792895 SAB0878c Staphylococcus aureus RF122 hypothetical protein YP_416365.1 951790 R 273036 CDS YP_416366.1 82750625 3792896 953217..954785 1 NC_007622.1 sodium/alanine symporter family protein 954785 3792896 SAB0879 Staphylococcus aureus RF122 sodium/alanine symporter family protein YP_416366.1 953217 D 273036 CDS YP_416367.1 82750626 3792897 954928..955686 1 NC_007622.1 hypothetical protein 955686 3792897 SAB0880 Staphylococcus aureus RF122 hypothetical protein YP_416367.1 954928 D 273036 CDS YP_416368.1 82750627 3792898 955880..956389 1 NC_007622.1 similar to 2'-5' RNA ligase; hypothetical protein 956389 3792898 SAB0881 Staphylococcus aureus RF122 hypothetical protein YP_416368.1 955880 D 273036 CDS YP_416369.1 82750628 3792899 complement(956502..957692) 1 NC_007622.1 hypothetical protein 957692 3792899 SAB0882c Staphylococcus aureus RF122 hypothetical protein YP_416369.1 956502 R 273036 CDS YP_416370.1 82750629 3792900 complement(957670..958845) 1 NC_007622.1 processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids; diacylglycerol glucosyltransferase 958845 3792900 SAB0883c Staphylococcus aureus RF122 diacylglycerol glucosyltransferase YP_416370.1 957670 R 273036 CDS YP_416371.1 82750630 3794130 959278..960762 1 NC_007622.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase 960762 murE 3794130 murE Staphylococcus aureus RF122 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase YP_416371.1 959278 D 273036 CDS YP_416372.1 82750631 3794868 960752..961003 1 NC_007622.1 hypothetical protein 961003 3794868 SAB0885 Staphylococcus aureus RF122 hypothetical protein YP_416372.1 960752 D 273036 CDS YP_416373.1 82750632 3794032 961003..962565 1 NC_007622.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 962565 prfC 3794032 prfC Staphylococcus aureus RF122 peptide chain release factor 3 YP_416373.1 961003 D 273036 CDS YP_416374.1 82750633 3794869 962867..963670 1 NC_007622.1 toxic anion resistance membrane protein 963670 3794869 SAB0887 Staphylococcus aureus RF122 toxic anion resistance membrane protein YP_416374.1 962867 D 273036 CDS YP_416375.1 82750634 3794870 963904..966213 1 NC_007622.1 serine proteinase 966213 3794870 SAB0888 Staphylococcus aureus RF122 serine proteinase YP_416375.1 963904 D 273036 CDS YP_416376.1 82750635 3794871 966230..967588 1 NC_007622.1 Na+ transporting ATP synthase 967588 3794871 SAB0889 Staphylococcus aureus RF122 Na+ transporting ATP synthase YP_416376.1 966230 D 273036 CDS YP_416377.1 82750636 3794872 967724..969238 1 NC_007622.1 5' nucleotidase 969238 3794872 SAB0890 Staphylococcus aureus RF122 5' nucleotidase YP_416377.1 967724 D 273036 CDS YP_416378.1 82750637 3794873 complement(969737..970306) 1 NC_007622.1 transcription factor 970306 3794873 SAB0891c Staphylococcus aureus RF122 transcription factor YP_416378.1 969737 R 273036 CDS YP_416379.1 82750638 3794874 970507..970734 1 NC_007622.1 hypothetical protein 970734 3794874 SAB0892 Staphylococcus aureus RF122 hypothetical protein YP_416379.1 970507 D 273036 CDS YP_416380.1 82750639 3794875 complement(970815..971801) 1 NC_007622.1 lipoate-protein ligase A 971801 3794875 SAB0893c Staphylococcus aureus RF122 lipoate-protein ligase A YP_416380.1 970815 R 273036 CDS YP_416381.1 82750640 3794876 972191..972793 1 NC_007622.1 hypothetical protein 972793 3794876 SAB0894 Staphylococcus aureus RF122 hypothetical protein YP_416381.1 972191 D 273036 CDS YP_416382.1 82750641 3794878 974136..976100 1 NC_007622.1 hypothetical protein 976100 3794878 SAB0896 Staphylococcus aureus RF122 hypothetical protein YP_416382.1 974136 D 273036 CDS YP_416383.1 82750642 3794879 976103..976426 1 NC_007622.1 hypothetical protein 976426 3794879 SAB0897 Staphylococcus aureus RF122 hypothetical protein YP_416383.1 976103 D 273036 CDS YP_416384.1 82750643 3794880 976468..977061 1 NC_007622.1 ABC transporter ATP-binding protein 977061 3794880 SAB0898 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_416384.1 976468 D 273036 CDS YP_416385.1 82750644 3794881 complement(977149..977439) 1 NC_007622.1 hypothetical protein 977439 3794881 SAB0899c Staphylococcus aureus RF122 hypothetical protein YP_416385.1 977149 R 273036 CDS YP_416386.1 82750645 3794882 977772..978059 1 NC_007622.1 hypothetical protein 978059 3794882 SAB0900 Staphylococcus aureus RF122 hypothetical protein YP_416386.1 977772 D 273036 CDS YP_416387.1 82750646 3794883 978065..979546 1 NC_007622.1 glycosyl transferase 979546 3794883 SAB0901 Staphylococcus aureus RF122 glycosyl transferase YP_416387.1 978065 D 273036 CDS YP_416388.1 82750647 3794884 complement(979690..980364) 1 NC_007622.1 transposase 980364 3794884 SAB0902c Staphylococcus aureus RF122 transposase YP_416388.1 979690 R 273036 CDS YP_416389.1 82750648 3794885 complement(980434..980793) 1 NC_007622.1 hypothetical protein 980793 3794885 SAB0903c Staphylococcus aureus RF122 hypothetical protein YP_416389.1 980434 R 273036 CDS YP_416390.1 82750649 3794886 981279..981593 1 NC_007622.1 iron transport protein 981593 3794886 SAB0904 Staphylococcus aureus RF122 iron transport protein YP_416390.1 981279 D 273036 CDS YP_416391.1 82750650 3794770 981584..982234 1 NC_007622.1 iron transport protein 982234 3794770 SAB0905 Staphylococcus aureus RF122 iron transport protein YP_416391.1 981584 D 273036 CDS YP_416392.1 82750651 3794771 complement(982475..982765) 1 NC_007622.1 hypothetical protein 982765 3794771 SAB0906c Staphylococcus aureus RF122 hypothetical protein YP_416392.1 982475 R 273036 CDS YP_416393.1 82750652 3794772 982855..983406 1 NC_007622.1 hypothetical protein 983406 3794772 SAB0907 Staphylococcus aureus RF122 hypothetical protein YP_416393.1 982855 D 273036 CDS YP_416394.1 82750653 3794773 complement(983457..984395) 1 NC_007622.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 984395 3794773 SAB0908c Staphylococcus aureus RF122 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_416394.1 983457 R 273036 CDS YP_416395.1 82750654 3794774 984577..985938 1 NC_007622.1 menaquinone-specific isochorismate synthase 985938 3794774 SAB0909 Staphylococcus aureus RF122 menaquinone-specific isochorismate synthase YP_416395.1 984577 D 273036 CDS YP_416396.1 82750655 3794775 985925..987598 1 NC_007622.1 2-oxoglutarate decarboxylase 987598 3794775 SAB0910 Staphylococcus aureus RF122 2-oxoglutarate decarboxylase YP_416396.1 985925 D 273036 CDS YP_416397.1 82750656 3794776 987585..988388 1 NC_007622.1 hydrolase 988388 3794776 SAB0911 Staphylococcus aureus RF122 hydrolase YP_416397.1 987585 D 273036 CDS YP_416398.1 82750657 3792977 988381..989202 1 NC_007622.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 989202 menB 3792977 menB Staphylococcus aureus RF122 naphthoate synthase YP_416398.1 988381 D 273036 CDS YP_416399.1 82750658 3793310 complement(989441..989770) 1 NC_007622.1 cysteine protease 989770 sspC 3793310 sspC Staphylococcus aureus RF122 cysteine protease YP_416399.1 989441 R 273036 CDS YP_416400.1 82750659 3793309 complement(989808..990989) 1 NC_007622.1 cysteine protease precursor 990989 sspB 3793309 sspB Staphylococcus aureus RF122 cysteine protease precursor YP_416400.1 989808 R 273036 CDS YP_416401.1 82750660 3793308 complement(991071..992045) 1 NC_007622.1 glutamyl endopeptidase serine protease 992045 sspA 3793308 sspA Staphylococcus aureus RF122 glutamyl endopeptidase serine protease YP_416401.1 991071 R 273036 CDS YP_416402.1 82750661 3794777 complement(992243..992407) 1 NC_007622.1 hypothetical protein 992407 3794777 SAB0916c Staphylococcus aureus RF122 hypothetical protein YP_416402.1 992243 R 273036 CDS YP_416403.1 82750662 3794778 complement(992573..993727) 1 NC_007622.1 aromatic amino acid transferase 993727 3794778 SAB0917c Staphylococcus aureus RF122 aromatic amino acid transferase YP_416403.1 992573 R 273036 CDS YP_416404.1 82750663 3794961 complement(995714..999505) 1 NC_007622.1 autolysin 999505 atl 3794961 atl Staphylococcus aureus RF122 autolysin YP_416404.1 995714 R 273036 CDS YP_416405.1 82750664 3794780 complement(999711..1000145) 1 NC_007622.1 acetyltransferase family protein 1000145 3794780 SAB0920c Staphylococcus aureus RF122 acetyltransferase family protein YP_416405.1 999711 R 273036 CDS YP_416406.1 82750665 3794781 complement(1000300..1000770) 1 NC_007622.1 hypothetical protein 1000770 3794781 SAB0921c Staphylococcus aureus RF122 hypothetical protein YP_416406.1 1000300 R 273036 CDS YP_416407.1 82750666 3794782 complement(1000818..1002044) 1 NC_007622.1 hypothetical protein 1002044 3794782 SAB0922c Staphylococcus aureus RF122 hypothetical protein YP_416407.1 1000818 R 273036 CDS YP_416408.1 82750667 3794742 1002493..1003686 1 NC_007622.1 autolysis and methicillin resistant-related protein 1003686 fmt 3794742 fmt Staphylococcus aureus RF122 autolysis and methicillin resistant-related protein YP_416408.1 1002493 D 273036 CDS YP_416409.1 82750668 3794267 complement(1004223..1004513) 1 NC_007622.1 quinol oxidase polypeptide IV 1004513 qoxD 3794267 qoxD Staphylococcus aureus RF122 quinol oxidase polypeptide IV YP_416409.1 1004223 R 273036 CDS YP_416410.1 82750669 3794266 complement(1004510..1005115) 1 NC_007622.1 quinol oxidase polypeptide III 1005115 qoxC 3794266 qoxC Staphylococcus aureus RF122 quinol oxidase polypeptide III YP_416410.1 1004510 R 273036 CDS YP_416411.1 82750670 3794265 complement(1005105..1007093) 1 NC_007622.1 quinol oxidase polypeptide I 1007093 qoxB 3794265 qoxB Staphylococcus aureus RF122 quinol oxidase polypeptide I YP_416411.1 1005105 R 273036 CDS YP_416412.1 82750671 3794264 complement(1007093..1008193) 1 NC_007622.1 quinol oxidase polypeptide II 1008193 qoxA 3794264 qoxA Staphylococcus aureus RF122 quinol oxidase polypeptide II YP_416412.1 1007093 R 273036 CDS YP_416413.1 82750672 3794783 complement(1008766..1009083) 1 NC_007622.1 hypothetical protein 1009083 3794783 SAB0928c Staphylococcus aureus RF122 hypothetical protein YP_416413.1 1008766 R 273036 CDS YP_416414.1 82750673 3794784 complement(1009372..1009557) 1 NC_007622.1 hypothetical protein 1009557 3794784 SAB0929c Staphylococcus aureus RF122 hypothetical protein YP_416414.1 1009372 R 273036 CDS YP_416415.1 82750674 3794749 complement(1009864..1010724) 1 NC_007622.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1010724 folD 3794749 folD Staphylococcus aureus RF122 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_416415.1 1009864 R 273036 CDS YP_416416.1 82750675 3794674 1010925..1011407 1 NC_007622.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 1011407 purE 3794674 purE Staphylococcus aureus RF122 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_416416.1 1010925 D 273036 CDS YP_416417.1 82750676 3794677 1011394..1012518 1 NC_007622.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1012518 purK 3794677 purK Staphylococcus aureus RF122 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_416417.1 1011394 D 273036 CDS YP_416418.1 82750677 3794045 1012522..1013226 1 NC_007622.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1013226 purC 3794045 purC Staphylococcus aureus RF122 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_416418.1 1012522 D 273036 CDS YP_416419.1 82750678 3794785 1013226..1013489 1 NC_007622.1 hypothetical protein 1013489 3794785 SAB0934 Staphylococcus aureus RF122 hypothetical protein YP_416419.1 1013226 D 273036 CDS YP_416420.1 82750679 3794681 1013491..1014162 1 NC_007622.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1014162 purQ 3794681 purQ Staphylococcus aureus RF122 phosphoribosylformylglycinamidine synthase I YP_416420.1 1013491 D 273036 CDS YP_416421.1 82750680 3794678 1014155..1016344 1 NC_007622.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1016344 purL 3794678 purL Staphylococcus aureus RF122 phosphoribosylformylglycinamidine synthase II YP_416421.1 1014155 D 273036 CDS YP_416422.1 82750681 3794675 1016323..1017807 1 NC_007622.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1017807 purF 3794675 purF Staphylococcus aureus RF122 amidophosphoribosyltransferase YP_416422.1 1016323 D 273036 CDS YP_416423.1 82750682 3794679 1017800..1018828 1 NC_007622.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1018828 purM 3794679 purM Staphylococcus aureus RF122 phosphoribosylaminoimidazole synthetase YP_416423.1 1017800 D 273036 CDS YP_416424.1 82750683 3794680 1018831..1019397 1 NC_007622.1 phosphoribosylformylglycinamidine formyltransferase 1019397 purN 3794680 purN Staphylococcus aureus RF122 phosphoribosylformylglycinamidine formyltransferase YP_416424.1 1018831 D 273036 CDS YP_416425.1 82750684 3794676 1019412..1020890 1 NC_007622.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1020890 purH 3794676 purH Staphylococcus aureus RF122 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_416425.1 1019412 D 273036 CDS YP_416426.1 82750685 3794673 1020912..1022159 1 NC_007622.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1022159 purD 3794673 purD Staphylococcus aureus RF122 phosphoribosylamine--glycine ligase YP_416426.1 1020912 D 273036 CDS YP_416427.1 82750686 3794786 complement(1022425..1023231) 1 NC_007622.1 membrane transporter 1023231 3794786 SAB0942c Staphylococcus aureus RF122 membrane transporter YP_416427.1 1022425 R 273036 CDS YP_416428.1 82750687 3794787 complement(1023224..1024624) 1 NC_007622.1 cation ATP-binding ABC transporter protein 1024624 3794787 SAB0943c Staphylococcus aureus RF122 cation ATP-binding ABC transporter protein YP_416428.1 1023224 R 273036 CDS YP_416429.1 82750688 3794788 complement(1024639..1025214) 1 NC_007622.1 hypothetical protein 1025214 3794788 SAB0944c Staphylococcus aureus RF122 hypothetical protein YP_416429.1 1024639 R 273036 CDS YP_416430.1 82750689 3794789 1026020..1027315 1 NC_007622.1 hypothetical protein 1027315 3794789 SAB0945 Staphylococcus aureus RF122 hypothetical protein YP_416430.1 1026020 D 273036 CDS YP_416431.1 82750690 3794419 complement(1027336..1027539) 1 NC_007622.1 hypothetical protein 1027539 3794419 SAB0946c Staphylococcus aureus RF122 hypothetical protein YP_416431.1 1027336 R 273036 CDS YP_416432.1 82750691 3794420 1027740..1028912 1 NC_007622.1 hypothetical protein 1028912 3794420 SAB0947 Staphylococcus aureus RF122 hypothetical protein YP_416432.1 1027740 D 273036 CDS YP_416433.1 82750692 3794421 1028966..1029508 1 NC_007622.1 hypothetical protein 1029508 3794421 SAB0948 Staphylococcus aureus RF122 hypothetical protein YP_416433.1 1028966 D 273036 CDS YP_416434.1 82750693 3794041 1029662..1029928 1 NC_007622.1 phosphocarrier protein HPr 1029928 ptsH 3794041 ptsH Staphylococcus aureus RF122 phosphocarrier protein HPr YP_416434.1 1029662 D 273036 CDS YP_416435.1 82750694 3794042 1029931..1031649 1 NC_007622.1 phosphoenolpyruvate-protein phosphatase 1031649 ptsI 3794042 ptsI Staphylococcus aureus RF122 phosphoenolpyruvate-protein phosphatase YP_416435.1 1029931 D 273036 CDS YP_416436.1 82750695 3794422 complement(1031884..1032117) 1 NC_007622.1 hypothetical protein 1032117 3794422 SAB0951c Staphylococcus aureus RF122 hypothetical protein YP_416436.1 1031884 R 273036 CDS YP_416437.1 82750696 3794423 1032314..1033675 1 NC_007622.1 cytochrome d ubiquinol oxidase subunit I 1033675 3794423 SAB0952 Staphylococcus aureus RF122 cytochrome d ubiquinol oxidase subunit I YP_416437.1 1032314 D 273036 CDS YP_416438.1 82750697 3794424 1033672..1034691 1 NC_007622.1 cytochrome d ubiquinol oxidase subunit II 1034691 3794424 SAB0953 Staphylococcus aureus RF122 cytochrome d ubiquinol oxidase subunit II YP_416438.1 1033672 D 273036 CDS YP_416439.1 82750698 3794425 1034824..1035486 1 NC_007622.1 potassium uptake protein 1035486 3794425 SAB0954 Staphylococcus aureus RF122 potassium uptake protein YP_416439.1 1034824 D 273036 CDS YP_416440.1 82750699 3794426 complement(1035600..1037297) 1 NC_007622.1 hypothetical protein 1037297 3794426 SAB0955c Staphylococcus aureus RF122 hypothetical protein YP_416440.1 1035600 R 273036 CDS YP_416441.1 82750700 3794427 complement(1037297..1037515) 1 NC_007622.1 hypothetical protein 1037515 3794427 SAB0956c Staphylococcus aureus RF122 hypothetical protein YP_416441.1 1037297 R 273036 CDS YP_416442.1 82750701 3794428 complement(1037997..1038548) 1 NC_007622.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1038548 def 3794428 def Staphylococcus aureus RF122 peptide deformylase YP_416442.1 1037997 R 273036 CDS YP_416443.1 82750702 3794429 1038913..1039539 1 NC_007622.1 hypothetical protein 1039539 3794429 SAB0958 Staphylococcus aureus RF122 hypothetical protein YP_416443.1 1038913 D 273036 CDS YP_416444.1 82750703 3794458 1039710..1040822 1 NC_007622.1 pyruvate dehydrogenase E1 component alpha subunit 1040822 pdhA 3794458 pdhA Staphylococcus aureus RF122 pyruvate dehydrogenase E1 component alpha subunit YP_416444.1 1039710 D 273036 CDS YP_416445.1 82750704 3794459 1040826..1041803 1 NC_007622.1 pyruvate dehydrogenase E1 component beta subunit 1041803 pdhB 3794459 pdhB Staphylococcus aureus RF122 pyruvate dehydrogenase E1 component beta subunit YP_416445.1 1040826 D 273036 CDS YP_416446.1 82750705 3794460 1041894..1043186 1 NC_007622.1 branched-chain alpha-keto acid dehydrogenase subunit E2 1043186 pdhC 3794460 pdhC Staphylococcus aureus RF122 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_416446.1 1041894 D 273036 CDS YP_416447.1 82750706 3794461 1043190..1044596 1 NC_007622.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1044596 pdhD 3794461 pdhD Staphylococcus aureus RF122 dihydrolipoamide dehydrogenase YP_416447.1 1043190 D 273036 CDS YP_416448.1 82750707 3794430 1044764..1045039 1 NC_007622.1 hypothetical protein 1045039 3794430 SAB0963 Staphylococcus aureus RF122 hypothetical protein YP_416448.1 1044764 D 273036 CDS YP_416449.1 82750708 3794431 1045183..1045722 1 NC_007622.1 transcriptional regulator 1045722 3794431 SAB0964 Staphylococcus aureus RF122 transcriptional regulator YP_416449.1 1045183 D 273036 CDS YP_416450.1 82750709 3794432 1045734..1046828 1 NC_007622.1 spermidine/putrescine ATP-binding ABC transporter protein 1046828 3794432 SAB0965 Staphylococcus aureus RF122 spermidine/putrescine ATP-binding ABC transporter protein YP_416450.1 1045734 D 273036 CDS YP_416451.1 82750710 3794434 1047625..1048434 1 NC_007622.1 spermidine/putrescine ABC transporter permease protein 1048434 3794434 SAB0967 Staphylococcus aureus RF122 spermidine/putrescine ABC transporter permease protein YP_416451.1 1047625 D 273036 CDS YP_416452.1 82750711 3794435 1048434..1049507 1 NC_007622.1 spermidine/putrescine-binding periplasmic protein precursor 1049507 3794435 SAB0968 Staphylococcus aureus RF122 spermidine/putrescine-binding periplasmic protein precursor YP_416452.1 1048434 D 273036 CDS YP_416453.1 82750712 3794436 1049581..1050594 1 NC_007622.1 hypothetical protein 1050594 3794436 SAB0969 Staphylococcus aureus RF122 hypothetical protein YP_416453.1 1049581 D 273036 CDS YP_416454.1 82750713 3794437 1050877..1051296 1 NC_007622.1 hypothetical protein 1051296 3794437 SAB0970 Staphylococcus aureus RF122 hypothetical protein YP_416454.1 1050877 D 273036 CDS YP_416455.1 82750714 3792861 complement(1051378..1052730) 1 NC_007622.1 manganese transport protein MntH 1052730 3792861 SAB0971c Staphylococcus aureus RF122 manganese transport protein MntH YP_416455.1 1051378 R 273036 CDS YP_416456.1 82750715 3792862 complement(1052914..1053528) 1 NC_007622.1 hypothetical protein 1053528 3792862 SAB0972c Staphylococcus aureus RF122 hypothetical protein YP_416456.1 1052914 R 273036 CDS YP_416457.1 82750716 3792863 1053685..1054512 1 NC_007622.1 inositol-1-monophosphatase 1054512 3792863 SAB0973 Staphylococcus aureus RF122 inositol-1-monophosphatase YP_416457.1 1053685 D 273036 CDS YP_416458.1 82750717 3792864 1054959..1056806 1 NC_007622.1 GTP-binding elongation factor protein 1056806 3792864 SAB0974 Staphylococcus aureus RF122 GTP-binding elongation factor protein YP_416458.1 1054959 D 273036 CDS YP_416459.1 82750718 3792865 complement(1056946..1057113) 1 NC_007622.1 hypothetical protein 1057113 3792865 SAB0975c Staphylococcus aureus RF122 hypothetical protein YP_416459.1 1056946 R 273036 CDS YP_416460.1 82750719 3792866 complement(1057115..1057597) 1 NC_007622.1 hypothetical protein 1057597 3792866 SAB0976c Staphylococcus aureus RF122 hypothetical protein YP_416460.1 1057115 R 273036 CDS YP_416461.1 82750720 3792867 1057738..1058013 1 NC_007622.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein; hypothetical protein 1058013 3792867 SAB0977 Staphylococcus aureus RF122 hypothetical protein YP_416461.1 1057738 D 273036 CDS YP_416462.1 82750721 3792868 1058327..1059553 1 NC_007622.1 cell division protein 1059553 3792868 SAB0978 Staphylococcus aureus RF122 cell division protein YP_416462.1 1058327 D 273036 CDS YP_416463.1 82750722 3792869 1060107..1063559 1 NC_007622.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1063559 3792869 SAB0979 Staphylococcus aureus RF122 pyruvate carboxylase YP_416463.1 1060107 D 273036 CDS YP_416464.1 82750723 3795278 complement(1063699..1064769) 1 NC_007622.1 heme O-oxygenase 1064769 ctaA 3795278 ctaA Staphylococcus aureus RF122 heme O-oxygenase YP_416464.1 1063699 R 273036 CDS YP_416465.1 82750724 3795279 1065050..1065961 1 NC_007622.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1065961 ctaB 3795279 ctaB Staphylococcus aureus RF122 protoheme IX farnesyltransferase YP_416465.1 1065050 D 273036 CDS YP_416466.1 82750725 3792870 1065986..1066447 1 NC_007622.1 hypothetical protein 1066447 3792870 SAB0982 Staphylococcus aureus RF122 hypothetical protein YP_416466.1 1065986 D 273036 CDS YP_416467.1 82750726 3792871 1066773..1067810 1 NC_007622.1 hypothetical protein 1067810 3792871 SAB0983 Staphylococcus aureus RF122 hypothetical protein YP_416467.1 1066773 D 273036 CDS YP_416468.1 82750727 3792872 1067826..1068260 1 NC_007622.1 hypothetical protein 1068260 3792872 SAB0984 Staphylococcus aureus RF122 hypothetical protein YP_416468.1 1067826 D 273036 CDS YP_416469.1 82750728 3792873 complement(1068323..1069249) 1 NC_007622.1 hypothetical protein 1069249 3792873 SAB0985c Staphylococcus aureus RF122 hypothetical protein YP_416469.1 1068323 R 273036 CDS YP_416470.1 82750729 3792874 1069489..1069743 1 NC_007622.1 hypothetical protein 1069743 3792874 SAB0986 Staphylococcus aureus RF122 hypothetical protein YP_416470.1 1069489 D 273036 CDS YP_416471.1 82750730 3792875 complement(1069746..1070135) 1 NC_007622.1 hypothetical protein 1070135 3792875 SAB0987c Staphylococcus aureus RF122 hypothetical protein YP_416471.1 1069746 R 273036 CDS YP_416472.1 82750731 3792876 1070205..1070747 1 NC_007622.1 methyltransferase 1070747 3792876 SAB0988 Staphylococcus aureus RF122 methyltransferase YP_416472.1 1070205 D 273036 CDS YP_416473.1 82750732 3794838 1070749..1071231 1 NC_007622.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1071231 coaD 3794838 coaD Staphylococcus aureus RF122 phosphopantetheine adenylyltransferase YP_416473.1 1070749 D 273036 CDS YP_416474.1 82750733 3792877 complement(1071293..1072432) 1 NC_007622.1 hypothetical protein 1072432 3792877 SAB0990c Staphylococcus aureus RF122 hypothetical protein YP_416474.1 1071293 R 273036 CDS YP_416475.1 82750734 3792878 1072559..1073116 1 NC_007622.1 hypothetical protein 1073116 3792878 SAB0991 Staphylococcus aureus RF122 hypothetical protein YP_416475.1 1072559 D 273036 CDS YP_416476.1 82750735 3792921 1073196..1073369 1 NC_007622.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1073369 rpmF 3792921 rpmF Staphylococcus aureus RF122 50S ribosomal protein L32 YP_416476.1 1073196 D 273036 CDS YP_416477.1 82750736 3795267 complement(1073523..1075412) 1 NC_007622.1 iron-regulated cell wall-anchored protein 1075412 isdA 3795267 isdA Staphylococcus aureus RF122 iron-regulated cell wall-anchored protein YP_416477.1 1073523 R 273036 CDS YP_416478.1 82750737 3795268 complement(1075615..1076667) 1 NC_007622.1 cell surface transferrin-binding protein 1076667 isdB 3795268 isdB Staphylococcus aureus RF122 cell surface transferrin-binding protein YP_416478.1 1075615 R 273036 CDS YP_416479.1 82750738 3795269 1076876..1077559 1 NC_007622.1 iron-regulated cell surface protein 1077559 isdC 3795269 isdC Staphylococcus aureus RF122 iron-regulated cell surface protein YP_416479.1 1076876 D 273036 CDS YP_416480.1 82750739 3795270 1077559..1078635 1 NC_007622.1 hypothetical protein 1078635 isdD 3795270 isdD Staphylococcus aureus RF122 hypothetical protein YP_416480.1 1077559 D 273036 CDS YP_416481.1 82750740 3795271 1078632..1079510 1 NC_007622.1 iron transport lipoprotein 1079510 isdE 3795271 isdE Staphylococcus aureus RF122 iron transport lipoprotein YP_416481.1 1078632 D 273036 CDS YP_416482.1 82750741 3795272 1079520..1080488 1 NC_007622.1 iron transport permease protein 1080488 isdF 3795272 isdF Staphylococcus aureus RF122 iron transport permease protein YP_416482.1 1079520 D 273036 CDS YP_416483.1 82750742 3793013 1080550..1081284 1 NC_007622.1 NPQTN specific sortase B 1081284 srtB 3793013 srtB Staphylococcus aureus RF122 NPQTN specific sortase B YP_416483.1 1080550 D 273036 CDS YP_416484.1 82750743 3792879 1081303..1081626 1 NC_007622.1 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; heme-degrading monooxygenase IsdG 1081626 3792879 SAB1000 Staphylococcus aureus RF122 heme-degrading monooxygenase IsdG YP_416484.1 1081303 D 273036 CDS YP_416485.1 82750744 3792880 1082010..1082750 1 NC_007622.1 rRNA methyltransferase 1082750 3792880 SAB1001 Staphylococcus aureus RF122 rRNA methyltransferase YP_416485.1 1082010 D 273036 CDS YP_416486.1 82750745 3794469 1083131..1084189 1 NC_007622.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1084189 pheS 3794469 pheS Staphylococcus aureus RF122 phenylalanyl-tRNA synthetase subunit alpha YP_416486.1 1083131 D 273036 CDS YP_416487.1 82750746 3794470 1084189..1086591 1 NC_007622.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1086591 pheT 3794470 pheT Staphylococcus aureus RF122 phenylalanyl-tRNA synthetase subunit beta YP_416487.1 1084189 D 273036 CDS YP_416488.2 161777620 3793132 complement(1086900..1087838) 1 NC_007622.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 1087838 3793132 SAB1004c Staphylococcus aureus RF122 ribonuclease HIII YP_416488.2 1086900 R 273036 CDS YP_416489.1 82750748 3793133 1088213..1088479 1 NC_007622.1 hypothetical protein 1088479 3793133 SAB1005 Staphylococcus aureus RF122 hypothetical protein YP_416489.1 1088213 D 273036 CDS YP_416490.1 82750749 3793134 1088480..1089001 1 NC_007622.1 hypothetical protein 1089001 3793134 SAB1006 Staphylococcus aureus RF122 hypothetical protein YP_416490.1 1088480 D 273036 CDS YP_416491.1 82750750 3793135 1089074..1090786 1 NC_007622.1 hypothetical protein 1090786 3793135 SAB1007 Staphylococcus aureus RF122 hypothetical protein YP_416491.1 1089074 D 273036 CDS YP_416492.1 82750751 3793136 1090796..1093144 1 NC_007622.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1093144 3793136 SAB1008 Staphylococcus aureus RF122 recombination and DNA strand exchange inhibitor protein YP_416492.1 1090796 D 273036 CDS YP_416493.1 82750752 3795128 1093317..1093631 1 NC_007622.1 thioredoxin 1093631 trxA 3795128 trxA Staphylococcus aureus RF122 thioredoxin YP_416493.1 1093317 D 273036 CDS YP_416494.1 82750753 3794171 1093955..1095736 1 NC_007622.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1095736 uvrC 3794171 uvrC Staphylococcus aureus RF122 excinuclease ABC subunit C YP_416494.1 1093955 D 273036 CDS YP_416495.1 82750754 3793183 1096060..1096674 1 NC_007622.1 succinate dehydrogenase cytochrome b-558 1096674 sdhC 3793183 sdhC Staphylococcus aureus RF122 succinate dehydrogenase cytochrome b-558 YP_416495.1 1096060 D 273036 CDS YP_416496.1 82750755 3793181 1096726..1098492 1 NC_007622.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1098492 sdhA 3793181 sdhA Staphylococcus aureus RF122 succinate dehydrogenase flavoprotein subunit YP_416496.1 1096726 D 273036 CDS YP_416497.1 82750756 3793182 1098492..1099307 1 NC_007622.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1099307 sdhB 3793182 sdhB Staphylococcus aureus RF122 succinate dehydrogenase iron-sulfur subunit YP_416497.1 1098492 D 273036 CDS YP_416498.1 82750757 3794132 1099548..1100348 1 NC_007622.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1100348 murI 3794132 murI Staphylococcus aureus RF122 glutamate racemase YP_416498.1 1099548 D 273036 CDS YP_416499.1 82750758 3793137 1100360..1100947 1 NC_007622.1 hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 1100947 3793137 SAB1015 Staphylococcus aureus RF122 nucleoside-triphosphatase YP_416499.1 1100360 D 273036 CDS YP_416500.1 82750759 3793138 1100940..1101443 1 NC_007622.1 hypothetical protein 1101443 3793138 SAB1016 Staphylococcus aureus RF122 hypothetical protein YP_416500.1 1100940 D 273036 CDS YP_416501.1 82750760 3793139 1101572..1101739 1 NC_007622.1 hypothetical protein 1101739 3793139 SAB1017 Staphylococcus aureus RF122 hypothetical protein YP_416501.1 1101572 D 273036 CDS YP_416502.1 82750761 3793140 1101933..1102262 1 NC_007622.1 hypothetical protein 1102262 3793140 SAB1018 Staphylococcus aureus RF122 hypothetical protein YP_416502.1 1101933 D 273036 CDS YP_416503.1 82750762 3793141 complement(1102631..1103032) 1 NC_007622.1 FLIPr; secreted protein that blocks the formyl peptide receptor-like 1 (FPRL1) found in neutrophils, monocytes, B cells, and NK cells; inhibits the binding of chemoattractants (such as formylated peptides) to FPRL1, which initiates the phagocyte mobilization towards the infection site; formyl peptide receptor-like 1 inhibitory protein 1103032 3793141 SAB1019c Staphylococcus aureus RF122 formyl peptide receptor-like 1 inhibitory protein YP_416503.1 1102631 R 273036 CDS YP_416504.1 82750763 3793142 1103705..1104211 1 NC_007622.1 hypothetical protein 1104211 3793142 SAB1020 Staphylococcus aureus RF122 hypothetical protein YP_416504.1 1103705 D 273036 CDS YP_416505.1 82750764 3794739 1104470..1104967 1 NC_007622.1 fibrinogen-binding protein 1104967 fib 3794739 fib Staphylococcus aureus RF122 fibrinogen-binding protein YP_416505.1 1104470 D 273036 CDS YP_416506.1 82750765 3793143 1105122..1105472 1 NC_007622.1 fibrinogen-binding protein precursor 1105472 3793143 SAB1022 Staphylococcus aureus RF122 fibrinogen-binding protein precursor YP_416506.1 1105122 D 273036 CDS YP_416507.1 82750766 3793144 complement(1105724..1105918) 1 NC_007622.1 hypothetical protein 1105918 3793144 SAB1023c Staphylococcus aureus RF122 hypothetical protein YP_416507.1 1105724 R 273036 CDS YP_416508.1 82750767 3793145 complement(1106075..1106260) 1 NC_007622.1 hypothetical protein 1106260 3793145 SAB1024c Staphylococcus aureus RF122 hypothetical protein YP_416508.1 1106075 R 273036 CDS YP_416509.1 82750768 3793146 complement(1106470..1106718) 1 NC_007622.1 hypothetical protein 1106718 3793146 SAB1025c Staphylococcus aureus RF122 hypothetical protein YP_416509.1 1106470 R 273036 CDS YP_416510.1 82750769 3793147 complement(1106882..1107115) 1 NC_007622.1 hypothetical protein 1107115 3793147 SAB1026c Staphylococcus aureus RF122 hypothetical protein YP_416510.1 1106882 R 273036 CDS YP_416511.1 82750770 3794921 complement(1107592..1108551) 1 NC_007622.1 alpha-hemolysin precursor 1108551 hla 3794921 hla Staphylococcus aureus RF122 alpha-hemolysin precursor YP_416511.1 1107592 R 273036 CDS YP_416512.1 82750771 3793148 1109224..1109370 1 NC_007622.1 hypothetical protein 1109370 3793148 SAB1028 Staphylococcus aureus RF122 hypothetical protein YP_416512.1 1109224 D 273036 CDS YP_416513.1 82750772 3793149 1109354..1109551 1 NC_007622.1 hypothetical protein 1109551 3793149 SAB1029 Staphylococcus aureus RF122 hypothetical protein YP_416513.1 1109354 D 273036 CDS YP_416514.1 82750773 3793150 complement(1109995..1110711) 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 1110711 3793150 SAB1030c Staphylococcus aureus RF122 superantigen-like protein YP_416514.1 1109995 R 273036 CDS YP_416515.1 82750774 3793659 complement(1110819..1111544) 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 1111544 3793659 SAB1031c Staphylococcus aureus RF122 superantigen-like protein YP_416515.1 1110819 R 273036 CDS YP_416516.1 82750775 3793660 complement(1111640..1112365) 1 NC_007622.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 1112365 3793660 SAB1032c Staphylococcus aureus RF122 superantigen-like protein YP_416516.1 1111640 R 273036 CDS YP_416517.1 82750776 3793661 1112803..1113804 1 NC_007622.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1113804 3793661 SAB1033 Staphylococcus aureus RF122 ornithine carbamoyltransferase YP_416517.1 1112803 D 273036 CDS YP_416518.1 82750777 3793662 1113827..1114759 1 NC_007622.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 1114759 3793662 SAB1034 Staphylococcus aureus RF122 carbamate kinase YP_416518.1 1113827 D 273036 CDS YP_416519.1 82750778 3793663 1114930..1116486 1 NC_007622.1 hypothetical protein 1116486 3793663 SAB1035 Staphylococcus aureus RF122 hypothetical protein YP_416519.1 1114930 D 273036 CDS YP_416520.1 82750779 3793664 complement(1116638..1116925) 1 NC_007622.1 hypothetical protein 1116925 3793664 SAB1036c Staphylococcus aureus RF122 hypothetical protein YP_416520.1 1116638 R 273036 CDS YP_416521.1 82750780 3793665 complement(1117338..1118285) 1 NC_007622.1 exfoliative toxin 1118285 3793665 SAB1037c Staphylococcus aureus RF122 exfoliative toxin YP_416521.1 1117338 R 273036 CDS YP_416523.1 82750782 3793667 1120088..1120774 1 NC_007622.1 haloacid dehalgenase-like hydrolase 1120774 3793667 SAB1039 Staphylococcus aureus RF122 haloacid dehalgenase-like hydrolase YP_416523.1 1120088 D 273036 CDS YP_416524.1 82750783 3793668 complement(1120882..1121322) 1 NC_007622.1 hypothetical protein 1121322 3793668 SAB1040c Staphylococcus aureus RF122 hypothetical protein YP_416524.1 1120882 R 273036 CDS YP_416525.1 82750784 3793669 1121517..1123130 1 NC_007622.1 hypothetical protein 1123130 3793669 SAB1041 Staphylococcus aureus RF122 hypothetical protein YP_416525.1 1121517 D 273036 CDS YP_416526.1 82750785 3793670 1123275..1123706 1 NC_007622.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1123706 3793670 SAB1042 Staphylococcus aureus RF122 cell division protein MraZ YP_416526.1 1123275 D 273036 CDS YP_416527.1 82750786 3793671 1123722..1124657 1 NC_007622.1 S-adenosyl-methyltransferase MraW 1124657 mraW 3793671 mraW Staphylococcus aureus RF122 S-adenosyl-methyltransferase MraW YP_416527.1 1123722 D 273036 CDS YP_416528.1 82750787 3793672 1124641..1125072 1 NC_007622.1 cell division protein 1125072 3793672 SAB1044 Staphylococcus aureus RF122 cell division protein YP_416528.1 1124641 D 273036 CDS YP_416529.1 82750788 3794119 1125053..1127287 1 NC_007622.1 penicillin-binding protein 1 1127287 pbpA 3794119 pbpA Staphylococcus aureus RF122 penicillin-binding protein 1 YP_416529.1 1125053 D 273036 CDS YP_416530.1 82750789 3793457 1127579..1128544 1 NC_007622.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1128544 mraY 3793457 mraY Staphylococcus aureus RF122 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_416530.1 1127579 D 273036 CDS YP_416531.1 82750790 3794129 1128546..1129895 1 NC_007622.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1129895 murD 3794129 murD Staphylococcus aureus RF122 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_416531.1 1128546 D 273036 CDS YP_416532.1 82750791 3793673 1129911..1131230 1 NC_007622.1 cell division protein 1131230 3793673 SAB1048 Staphylococcus aureus RF122 cell division protein YP_416532.1 1129911 D 273036 CDS YP_416533.1 82750792 3794344 1131335..1132741 1 NC_007622.1 cell division protein 1132741 ftsA 3794344 ftsA Staphylococcus aureus RF122 cell division protein YP_416533.1 1131335 D 273036 CDS YP_416534.1 82750793 3794346 1132774..1133946 1 NC_007622.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1133946 ftsZ 3794346 ftsZ Staphylococcus aureus RF122 cell division protein FtsZ YP_416534.1 1132774 D 273036 CDS YP_416535.1 82750794 3793674 1134207..1134998 1 NC_007622.1 hypothetical protein 1134998 3793674 SAB1051 Staphylococcus aureus RF122 hypothetical protein YP_416535.1 1134207 D 273036 CDS YP_416536.1 82750795 3793675 1135016..1135690 1 NC_007622.1 hypothetical protein 1135690 3793675 SAB1052 Staphylococcus aureus RF122 hypothetical protein YP_416536.1 1135016 D 273036 CDS YP_416537.1 82750796 3793676 1135687..1136250 1 NC_007622.1 hypothetical protein 1136250 3793676 SAB1053 Staphylococcus aureus RF122 hypothetical protein YP_416537.1 1135687 D 273036 CDS YP_416538.1 82750797 3793677 1136262..1136552 1 NC_007622.1 hypothetical protein 1136552 3793677 SAB1054 Staphylococcus aureus RF122 hypothetical protein YP_416538.1 1136262 D 273036 CDS YP_416539.1 82750798 3793738 1137464..1138081 1 NC_007622.1 hypothetical protein 1138081 3793738 SAB1056 Staphylococcus aureus RF122 hypothetical protein YP_416539.1 1137464 D 273036 CDS YP_416540.1 82750799 3795257 1138302..1141055 1 NC_007622.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1141055 ileS 3795257 ileS Staphylococcus aureus RF122 isoleucyl-tRNA synthetase YP_416540.1 1138302 D 273036 CDS YP_416541.1 82750800 3793739 1141345..1142142 1 NC_007622.1 hypothetical protein 1142142 3793739 SAB1058 Staphylococcus aureus RF122 hypothetical protein YP_416541.1 1141345 D 273036 CDS YP_416542.1 82750801 3794757 1143377..1143868 1 NC_007622.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1143868 lspA 3794757 lspA Staphylococcus aureus RF122 lipoprotein signal peptidase YP_416542.1 1143377 D 273036 CDS YP_416543.1 82750802 3793741 1143868..1144785 1 NC_007622.1 hypothetical protein 1144785 3793741 SAB1061 Staphylococcus aureus RF122 hypothetical protein YP_416543.1 1143868 D 273036 CDS YP_416544.1 82750803 3794263 1145186..1145713 1 NC_007622.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 1145713 pyrR 3794263 pyrR Staphylococcus aureus RF122 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_416544.1 1145186 D 273036 CDS YP_416545.1 82750804 3794262 1145931..1147238 1 NC_007622.1 uracil permease 1147238 pyrP 3794262 pyrP Staphylococcus aureus RF122 uracil permease YP_416545.1 1145931 D 273036 CDS YP_416546.1 82750805 3794688 1147266..1148036 1 NC_007622.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1148036 pyrB 3794688 pyrB Staphylococcus aureus RF122 aspartate carbamoyltransferase catalytic subunit YP_416546.1 1147266 D 273036 CDS YP_416547.1 82750806 3794689 1148165..1149439 1 NC_007622.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1149439 pyrC 3794689 pyrC Staphylococcus aureus RF122 dihydroorotase YP_416547.1 1148165 D 273036 CDS YP_416548.1 82750807 3794686 1149441..1150541 1 NC_007622.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1150541 pyrAA 3794686 pyrAA Staphylococcus aureus RF122 carbamoyl phosphate synthase small subunit YP_416548.1 1149441 D 273036 CDS YP_416549.1 82750808 3794687 1150534..1153707 1 NC_007622.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1153707 carB 3794687 carB Staphylococcus aureus RF122 carbamoyl phosphate synthase large subunit YP_416549.1 1150534 D 273036 CDS YP_416550.1 82750809 3794691 1153817..1154509 1 NC_007622.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1154509 pyrF 3794691 pyrF Staphylococcus aureus RF122 orotidine 5'-phosphate decarboxylase YP_416550.1 1153817 D 273036 CDS YP_416551.1 82750810 3794690 1154509..1155120 1 NC_007622.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1155120 pyrE 3794690 pyrE Staphylococcus aureus RF122 orotate phosphoribosyltransferase YP_416551.1 1154509 D 273036 CDS YP_416552.1 82750811 3793742 1155150..1155362 1 NC_007622.1 hypothetical protein 1155362 3793742 SAB1070 Staphylococcus aureus RF122 hypothetical protein YP_416552.1 1155150 D 273036 CDS YP_416553.1 82750812 3793743 1155799..1156200 1 NC_007622.1 hypothetical protein 1156200 3793743 SAB1071 Staphylococcus aureus RF122 hypothetical protein YP_416553.1 1155799 D 273036 CDS YP_416554.1 82750813 3793744 complement(1156663..1158360) 1 NC_007622.1 fibronectin/fibrinogen-binding protein 1158360 3793744 SAB1072c Staphylococcus aureus RF122 fibronectin/fibrinogen-binding protein YP_416554.1 1156663 R 273036 CDS YP_416555.1 82750814 3794224 1158635..1159258 1 NC_007622.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1159258 gmk 3794224 gmk Staphylococcus aureus RF122 guanylate kinase YP_416555.1 1158635 D 273036 CDS YP_416556.1 82750815 3793745 1159258..1159476 1 NC_007622.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1159476 rpoZ 3793745 rpoZ Staphylococcus aureus RF122 DNA-directed RNA polymerase subunit omega YP_416556.1 1159258 D 273036 CDS YP_416557.1 82750816 3793746 1159692..1160891 1 NC_007622.1 pantothenate metabolism flavoprotein 1160891 3793746 SAB1075 Staphylococcus aureus RF122 pantothenate metabolism flavoprotein YP_416557.1 1159692 D 273036 CDS YP_416558.1 82750817 3794033 1160891..1163299 1 NC_007622.1 primosomal protein 1163299 priA 3794033 priA Staphylococcus aureus RF122 primosomal protein YP_416558.1 1160891 D 273036 CDS YP_416559.1 82750818 3793748 complement(1164914..1165192) 1 NC_007622.1 hypothetical protein 1165192 3793748 SAB1078c Staphylococcus aureus RF122 hypothetical protein YP_416559.1 1164914 R 273036 CDS YP_416560.1 82750819 3795294 1165416..1165904 1 NC_007622.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1165904 def 3795294 def Staphylococcus aureus RF122 peptide deformylase YP_416560.1 1165416 D 273036 CDS YP_416561.1 82750820 3794743 1165897..1166832 1 NC_007622.1 methionyl-tRNA formyltransferase 1166832 fmt 3794743 fmt Staphylococcus aureus RF122 methionyl-tRNA formyltransferase YP_416561.1 1165897 D 273036 CDS YP_416562.1 82750821 3793315 1166829..1168136 1 NC_007622.1 RNA-binding protein 1168136 sun 3793315 sun Staphylococcus aureus RF122 RNA-binding protein YP_416562.1 1166829 D 273036 CDS YP_416563.1 82750822 3793749 1168139..1169233 1 NC_007622.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1169233 3793749 SAB1082 Staphylococcus aureus RF122 ribosomal RNA large subunit methyltransferase N YP_416563.1 1168139 D 273036 CDS YP_416564.1 82750823 3793750 1169240..1169983 1 NC_007622.1 phosphoprotein phosphatase 1169983 3793750 SAB1083 Staphylococcus aureus RF122 phosphoprotein phosphatase YP_416564.1 1169240 D 273036 CDS YP_416565.1 82750824 3794474 1169980..1171974 1 NC_007622.1 protein kinase 1171974 pknB 3794474 pknB Staphylococcus aureus RF122 protein kinase YP_416565.1 1169980 D 273036 CDS YP_416566.1 82750825 3793751 1172202..1173077 1 NC_007622.1 hypothetical protein 1173077 3793751 SAB1085 Staphylococcus aureus RF122 hypothetical protein YP_416566.1 1172202 D 273036 CDS YP_416567.1 82750826 3793752 1173078..1173722 1 NC_007622.1 ribulose-phosphate 3-epimerase 1173722 3793752 SAB1086 Staphylococcus aureus RF122 ribulose-phosphate 3-epimerase YP_416567.1 1173078 D 273036 CDS YP_416568.1 82750827 3793753 1173729..1174370 1 NC_007622.1 hypothetical protein 1174370 3793753 SAB1087 Staphylococcus aureus RF122 hypothetical protein YP_416568.1 1173729 D 273036 CDS YP_416569.1 82750828 3795099 complement(1174752..1174940) 1 NC_007622.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1174940 rpmB 3795099 rpmB Staphylococcus aureus RF122 50S ribosomal protein L28 YP_416569.1 1174752 R 273036 CDS YP_416570.1 82750829 3793754 1175382..1175756 1 NC_007622.1 hypothetical protein 1175756 3793754 SAB1089 Staphylococcus aureus RF122 hypothetical protein YP_416570.1 1175382 D 273036 CDS YP_416571.1 82750830 3793755 1175771..1177417 1 NC_007622.1 hypothetical protein 1177417 3793755 SAB1090 Staphylococcus aureus RF122 hypothetical protein YP_416571.1 1175771 D 273036 CDS YP_416572.1 82750831 3794274 1177607..1179667 1 NC_007622.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1179667 recG 3794274 recG Staphylococcus aureus RF122 ATP-dependent DNA helicase RecG YP_416572.1 1177607 D 273036 CDS YP_416573.1 82750832 3793756 1179859..1180431 1 NC_007622.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator 1180431 3793756 SAB1092 Staphylococcus aureus RF122 fatty acid biosynthesis transcriptional regulator YP_416573.1 1179859 D 273036 CDS YP_416574.1 82750833 3795062 1180436..1181422 1 NC_007622.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1181422 3795062 SAB1093 Staphylococcus aureus RF122 glycerol-3-phosphate acyltransferase PlsX YP_416574.1 1180436 D 273036 CDS YP_416575.1 82750834 3793358 1181415..1182341 1 NC_007622.1 malonyl CoA-acyl carrier protein transacylase 1182341 fabD 3793358 fabD Staphylococcus aureus RF122 malonyl CoA-acyl carrier protein transacylase YP_416575.1 1181415 D 273036 CDS YP_416576.1 82750835 3793360 1182328..1183068 1 NC_007622.1 3-oxoacyl-(acyl-carrier protein) reductase 1183068 fabG 3793360 fabG Staphylococcus aureus RF122 3-oxoacyl-(acyl-carrier protein) reductase YP_416576.1 1182328 D 273036 CDS YP_416577.1 82750836 3794823 1183276..1183509 1 NC_007622.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1183509 acpP 3794823 acpP Staphylococcus aureus RF122 acyl carrier protein YP_416577.1 1183276 D 273036 CDS YP_416578.1 82750837 3795063 1183625..1184356 1 NC_007622.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1184356 rnc 3795063 rnc Staphylococcus aureus RF122 ribonuclease III YP_416578.1 1183625 D 273036 CDS YP_416579.1 82750838 3795064 1184503..1188069 1 NC_007622.1 chromosome segregation SMC protein 1188069 3795064 SAB1098 Staphylococcus aureus RF122 chromosome segregation SMC protein YP_416579.1 1184503 D 273036 CDS YP_416580.1 82750839 3795065 1188069..1189319 1 NC_007622.1 signal recognition particle protein 1189319 3795065 SAB1099 Staphylococcus aureus RF122 signal recognition particle protein YP_416580.1 1188069 D 273036 CDS YP_416581.1 82750840 3795066 1189306..1189638 1 NC_007622.1 DNA-binding protein 1189638 3795066 SAB1100 Staphylococcus aureus RF122 DNA-binding protein YP_416581.1 1189306 D 273036 CDS YP_416582.1 82750841 3794733 1189664..1191031 1 NC_007622.1 signal recognition particle protein 1191031 ffh 3794733 ffh Staphylococcus aureus RF122 signal recognition particle protein YP_416582.1 1189664 D 273036 CDS YP_416583.1 82750842 3794992 1191373..1191648 1 NC_007622.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1191648 rpsP 3794992 rpsP Staphylococcus aureus RF122 30S ribosomal protein S16 YP_416583.1 1191373 D 273036 CDS YP_416584.1 82750843 3793097 1191836..1192339 1 NC_007622.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1192339 rimM 3793097 rimM Staphylococcus aureus RF122 16S rRNA-processing protein RimM YP_416584.1 1191836 D 273036 CDS YP_416585.1 82750844 3794335 1192339..1193076 1 NC_007622.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1193076 trmD 3794335 trmD Staphylococcus aureus RF122 tRNA (guanine-N(1)-)-methyltransferase YP_416585.1 1192339 D 273036 CDS YP_416586.1 82750845 3795092 1193179..1193529 1 NC_007622.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1193529 rplS 3795092 rplS Staphylococcus aureus RF122 50S ribosomal protein L19 YP_416586.1 1193179 D 273036 CDS YP_416587.1 82750846 3795068 1197005..1197889 1 NC_007622.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1197889 rbgA 3795068 rbgA Staphylococcus aureus RF122 ribosomal biogenesis GTPase YP_416587.1 1197005 D 273036 CDS YP_416588.1 82750847 3795069 1197873..1198640 1 NC_007622.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1198640 rnhB 3795069 rnhB Staphylococcus aureus RF122 ribonuclease HII YP_416588.1 1197873 D 273036 CDS YP_416589.1 82750848 3795070 1198749..1199915 1 NC_007622.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1199915 sucC 3795070 sucC Staphylococcus aureus RF122 succinyl-CoA synthetase subunit beta YP_416589.1 1198749 D 273036 CDS YP_416590.1 82750849 3795071 1199937..1200845 1 NC_007622.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1200845 3795071 SAB1110 Staphylococcus aureus RF122 succinyl-CoA synthetase subunit alpha YP_416590.1 1199937 D 273036 CDS YP_416591.1 82750850 3792999 1201167..1202039 1 NC_007622.1 DNA processing protein 1202039 smf 3792999 smf Staphylococcus aureus RF122 DNA processing protein YP_416591.1 1201167 D 273036 CDS YP_416592.1 82750851 3794332 1202213..1204288 1 NC_007622.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1204288 topA 3794332 topA Staphylococcus aureus RF122 DNA topoisomerase I YP_416592.1 1202213 D 273036 CDS YP_416593.1 82750852 3794359 1204444..1205751 1 NC_007622.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1205751 gid 3794359 gid Staphylococcus aureus RF122 tRNA (uracil-5-)-methyltransferase Gid YP_416593.1 1204444 D 273036 CDS YP_416594.1 82750853 3795072 1206170..1207066 1 NC_007622.1 integrase/recombinase 1207066 3795072 SAB1114 Staphylococcus aureus RF122 integrase/recombinase YP_416594.1 1206170 D 273036 CDS YP_416595.1 82750854 3794093 1207063..1207608 1 NC_007622.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1207608 hslV 3794093 hslV Staphylococcus aureus RF122 ATP-dependent protease peptidase subunit YP_416595.1 1207063 D 273036 CDS YP_416596.1 82750855 3794092 1207674..1209077 1 NC_007622.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1209077 hslU 3794092 hslU Staphylococcus aureus RF122 ATP-dependent protease ATP-binding subunit HslU YP_416596.1 1207674 D 273036 CDS YP_416597.1 82750856 3794840 1209102..1209875 1 NC_007622.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1209875 codY 3794840 codY Staphylococcus aureus RF122 transcriptional repressor CodY YP_416597.1 1209102 D 273036 CDS YP_416598.1 82750857 3792933 1210217..1210984 1 NC_007622.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1210984 rpsB 3792933 rpsB Staphylococcus aureus RF122 30S ribosomal protein S2 YP_416598.1 1210217 D 273036 CDS YP_416599.1 82750858 3793327 1211166..1212047 1 NC_007622.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1212047 tsf 3793327 tsf Staphylococcus aureus RF122 elongation factor Ts YP_416599.1 1211166 D 273036 CDS YP_416600.1 82750859 3792998 1212184..1212906 1 NC_007622.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1212906 pyrH 3792998 pyrH Staphylococcus aureus RF122 uridylate kinase YP_416600.1 1212184 D 273036 CDS YP_416601.1 82750860 3794341 1212925..1213479 1 NC_007622.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1213479 frr 3794341 frr Staphylococcus aureus RF122 ribosome recycling factor YP_416601.1 1212925 D 273036 CDS YP_416602.1 82750861 3795137 1213852..1214622 1 NC_007622.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 1214622 uppS 3795137 uppS Staphylococcus aureus RF122 undecaprenyl pyrophosphate synthase YP_416602.1 1213852 D 273036 CDS YP_416603.1 82750862 3794413 1214629..1215411 1 NC_007622.1 phosphatidate cytidylyltransferase 1215411 cdsA 3794413 cdsA Staphylococcus aureus RF122 phosphatidate cytidylyltransferase YP_416603.1 1214629 D 273036 CDS YP_416604.1 82750863 3795073 1215623..1216909 1 NC_007622.1 zinc metalloprotease 1216909 3795073 SAB1124 Staphylococcus aureus RF122 zinc metalloprotease YP_416604.1 1215623 D 273036 CDS YP_416605.1 82750864 3794037 1216929..1218632 1 NC_007622.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1218632 proS 3794037 proS Staphylococcus aureus RF122 prolyl-tRNA synthetase YP_416605.1 1216929 D 273036 CDS YP_416606.1 82750865 3794028 1218890..1223206 1 NC_007622.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1223206 polC 3794028 polC Staphylococcus aureus RF122 DNA polymerase III PolC YP_416606.1 1218890 D 273036 CDS YP_416607.1 82750866 3795074 1223496..1223963 1 NC_007622.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1223963 3795074 SAB1127 Staphylococcus aureus RF122 hypothetical protein YP_416607.1 1223496 D 273036 CDS YP_416608.1 82750867 3793629 1223984..1225159 1 NC_007622.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1225159 nusA 3793629 nusA Staphylococcus aureus RF122 transcription elongation factor NusA YP_416608.1 1223984 D 273036 CDS YP_416609.1 82750868 3795075 1225180..1225464 1 NC_007622.1 hypothetical protein 1225464 3795075 SAB1129 Staphylococcus aureus RF122 hypothetical protein YP_416609.1 1225180 D 273036 CDS YP_416610.1 82750869 3795076 1225461..1225778 1 NC_007622.1 ribosomal protein 1225778 3795076 SAB1130 Staphylococcus aureus RF122 ribosomal protein YP_416610.1 1225461 D 273036 CDS YP_416611.1 82750870 3795263 1225783..1227900 1 NC_007622.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1227900 infB 3795263 infB Staphylococcus aureus RF122 translation initiation factor IF-2 YP_416611.1 1225783 D 273036 CDS YP_416612.1 82750871 3794271 1228287..1228637 1 NC_007622.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1228637 rbfA 3794271 rbfA Staphylococcus aureus RF122 ribosome-binding factor A YP_416612.1 1228287 D 273036 CDS YP_416613.1 82750872 3795127 1228807..1229724 1 NC_007622.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1229724 truB 3795127 truB Staphylococcus aureus RF122 tRNA pseudouridine synthase B YP_416613.1 1228807 D 273036 CDS YP_416614.1 82750873 3794280 1229739..1230710 1 NC_007622.1 bifunctional protein including riboflavin kinase and FAD synthase 1230710 ribC 3794280 ribC Staphylococcus aureus RF122 bifunctional protein including riboflavin kinase and FAD synthase YP_416614.1 1229739 D 273036 CDS YP_416615.1 82750874 3794991 1230825..1231094 1 NC_007622.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1231094 rpsO 3794991 rpsO Staphylococcus aureus RF122 30S ribosomal protein S15 YP_416615.1 1230825 D 273036 CDS YP_416616.1 82750875 3794026 1231463..1233559 1 NC_007622.1 polynucleotide phosphorylase/polyadenylase 1233559 pnpA 3794026 pnpA Staphylococcus aureus RF122 polynucleotide phosphorylase/polyadenylase YP_416616.1 1231463 D 273036 CDS YP_416617.1 82750876 3795077 1233871..1235469 1 NC_007622.1 metallo-beta-lactamase superfamily protein 1235469 3795077 SAB1137 Staphylococcus aureus RF122 metallo-beta-lactamase superfamily protein YP_416617.1 1233871 D 273036 CDS YP_416618.1 82750877 3795078 1235726..1238095 1 NC_007622.1 SpoIII family DNA translocase 1238095 3795078 SAB1138 Staphylococcus aureus RF122 SpoIII family DNA translocase YP_416618.1 1235726 D 273036 CDS YP_416619.1 82750878 3795079 1238100..1238813 1 NC_007622.1 GntR family transcriptional regulator 1238813 3795079 SAB1139 Staphylococcus aureus RF122 GntR family transcriptional regulator YP_416619.1 1238100 D 273036 CDS YP_416620.1 82750879 3795080 1238844..1240109 1 NC_007622.1 hypothetical protein 1240109 3795080 SAB1140 Staphylococcus aureus RF122 hypothetical protein YP_416620.1 1238844 D 273036 CDS YP_416621.1 82750880 3795081 1240109..1241395 1 NC_007622.1 protease (zinc) protein 1241395 3795081 SAB1141 Staphylococcus aureus RF122 protease (zinc) protein YP_416621.1 1240109 D 273036 CDS YP_416622.1 82750881 3794067 1242205..1243032 1 NC_007622.1 hypothetical protein 1243032 3794067 SAB1143 Staphylococcus aureus RF122 hypothetical protein YP_416622.1 1242205 D 273036 CDS YP_416623.1 82750882 3794068 1243051..1243443 1 NC_007622.1 DNA-binding protein 1243443 3794068 SAB1144 Staphylococcus aureus RF122 DNA-binding protein YP_416623.1 1243051 D 273036 CDS YP_416624.1 82750883 3794468 1243477..1244055 1 NC_007622.1 phosphatidylglycerophosphate synthase 1244055 pgsA 3794468 pgsA Staphylococcus aureus RF122 phosphatidylglycerophosphate synthase YP_416624.1 1243477 D 273036 CDS YP_416625.1 82750884 3794414 1244528..1245679 1 NC_007622.1 competence-damage inducible protein 1245679 cinA 3794414 cinA Staphylococcus aureus RF122 competence-damage inducible protein YP_416625.1 1244528 D 273036 CDS YP_416626.1 82750885 3794272 1245844..1246887 1 NC_007622.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1246887 recA 3794272 recA Staphylococcus aureus RF122 recombinase A YP_416626.1 1245844 D 273036 CDS YP_416627.1 82750886 3794069 1247241..1248800 1 NC_007622.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1248800 3794069 SAB1148 Staphylococcus aureus RF122 phosphodiesterase YP_416627.1 1247241 D 273036 CDS YP_416628.1 82750887 3794070 complement(1249097..1249312) 1 NC_007622.1 hypothetical protein 1249312 3794070 SAB1149c Staphylococcus aureus RF122 hypothetical protein YP_416628.1 1249097 R 273036 CDS YP_416629.1 82750888 3794071 1249486..1250283 1 NC_007622.1 hypothetical protein 1250283 3794071 SAB1150 Staphylococcus aureus RF122 hypothetical protein YP_416629.1 1249486 D 273036 CDS YP_416630.1 82750889 3794072 1250393..1252183 1 NC_007622.1 pyruvate ferredoxin oxidoreductase alpha chain 1252183 3794072 SAB1151 Staphylococcus aureus RF122 pyruvate ferredoxin oxidoreductase alpha chain YP_416630.1 1250393 D 273036 CDS YP_416631.1 82750890 3794073 1252184..1253050 1 NC_007622.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1253050 3794073 SAB1152 Staphylococcus aureus RF122 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_416631.1 1252184 D 273036 CDS YP_416632.1 82750891 3794074 1253144..1253437 1 NC_007622.1 hypothetical protein 1253437 3794074 SAB1153 Staphylococcus aureus RF122 hypothetical protein YP_416632.1 1253144 D 273036 CDS YP_416633.1 82750892 3794075 1253571..1255115 1 NC_007622.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1255115 3794075 SAB1154 Staphylococcus aureus RF122 (dimethylallyl)adenosine tRNA methylthiotransferase YP_416633.1 1253571 D 273036 CDS YP_416634.1 82750893 3794076 1255116..1255481 1 NC_007622.1 hypothetical protein 1255481 3794076 SAB1155 Staphylococcus aureus RF122 hypothetical protein YP_416634.1 1255116 D 273036 CDS YP_416635.1 82750894 3794077 1255508..1255999 1 NC_007622.1 hypothetical protein 1255999 3794077 SAB1156 Staphylococcus aureus RF122 hypothetical protein YP_416635.1 1255508 D 273036 CDS YP_416636.1 82750895 3794134 1256302..1258920 1 NC_007622.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1258920 mutS 3794134 mutS Staphylococcus aureus RF122 DNA mismatch repair protein MutS YP_416636.1 1256302 D 273036 CDS YP_416637.1 82750896 3793653 1260956..1261489 1 NC_007622.1 glycerol uptake operon antiterminator regulatory protein 1261489 glpP 3793653 glpP Staphylococcus aureus RF122 glycerol uptake operon antiterminator regulatory protein YP_416637.1 1260956 D 273036 CDS YP_416638.1 82750897 3793651 1261964..1262782 1 NC_007622.1 glycerol uptake facilitator 1262782 glpF 3793651 glpF Staphylococcus aureus RF122 glycerol uptake facilitator YP_416638.1 1261964 D 273036 CDS YP_416639.1 82750898 3793652 1262912..1264408 1 NC_007622.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 1264408 glpK 3793652 glpK Staphylococcus aureus RF122 glycerol kinase YP_416639.1 1262912 D 273036 CDS YP_416640.1 82750899 3793650 1264518..1266239 1 NC_007622.1 aerobic glycerol-3-phosphate dehydrogenase 1266239 glpD 3793650 glpD Staphylococcus aureus RF122 aerobic glycerol-3-phosphate dehydrogenase YP_416640.1 1264518 D 273036 CDS YP_416641.1 82750900 3794078 1266389..1267303 1 NC_007622.1 lysophospholipase 1267303 3794078 SAB1163 Staphylococcus aureus RF122 lysophospholipase YP_416641.1 1266389 D 273036 CDS YP_416642.1 82750901 3794079 1267309..1268256 1 NC_007622.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1268256 miaA 3794079 miaA Staphylococcus aureus RF122 tRNA delta(2)-isopentenylpyrophosphate transferase YP_416642.1 1267309 D 273036 CDS YP_416643.1 82750902 3794080 1268271..1268504 1 NC_007622.1 phage-related host factor-I protein 1268504 3794080 SAB1165 Staphylococcus aureus RF122 phage-related host factor-I protein YP_416643.1 1268271 D 273036 CDS YP_416644.1 82750903 3794081 complement(1268707..1269489) 1 NC_007622.1 transposase 1269489 3794081 SAB1166c Staphylococcus aureus RF122 transposase YP_416644.1 1268707 R 273036 CDS YP_416645.1 82750904 3794082 complement(1269528..1270028) 1 NC_007622.1 transposase 1270028 3794082 SAB1167c Staphylococcus aureus RF122 transposase YP_416645.1 1269528 R 273036 CDS YP_416646.1 82750905 3794083 complement(1270237..1270713) 1 NC_007622.1 glutathione peroxidase 1270713 3794083 SAB1168c Staphylococcus aureus RF122 glutathione peroxidase YP_416646.1 1270237 R 273036 CDS YP_416647.1 82750906 3794084 1270825..1272084 1 NC_007622.1 GTP-binding protein 1272084 3794084 SAB1169 Staphylococcus aureus RF122 GTP-binding protein YP_416647.1 1270825 D 273036 CDS YP_416648.1 82750907 3794535 1272081..1273319 1 NC_007622.1 hypothetical protein 1273319 3794535 SAB1170 Staphylococcus aureus RF122 hypothetical protein YP_416648.1 1272081 D 273036 CDS YP_416649.1 82750908 3793649 1273563..1273931 1 NC_007622.1 glutamine synthetase repressor 1273931 glnR 3793649 glnR Staphylococcus aureus RF122 glutamine synthetase repressor YP_416649.1 1273563 D 273036 CDS YP_416650.1 82750909 3793647 1273950..1275290 1 NC_007622.1 glutamine synthetase 1275290 glnA 3793647 glnA Staphylococcus aureus RF122 glutamine synthetase YP_416650.1 1273950 D 273036 CDS YP_416651.1 82750910 3794536 1278611..1278811 1 NC_007622.1 hypothetical protein 1278811 3794536 SAB1173 Staphylococcus aureus RF122 hypothetical protein YP_416651.1 1278611 D 273036 CDS YP_416652.1 82750911 3794537 1279323..1279739 1 NC_007622.1 hypothetical protein 1279739 3794537 SAB1174 Staphylococcus aureus RF122 hypothetical protein YP_416652.1 1279323 D 273036 CDS YP_416653.1 82750912 3794538 complement(1279804..1280025) 1 NC_007622.1 hypothetical protein 1280025 3794538 SAB1175c Staphylococcus aureus RF122 hypothetical protein YP_416653.1 1279804 R 273036 CDS YP_416654.1 82750913 3794539 1280574..1281908 1 NC_007622.1 hypothetical protein 1281908 3794539 SAB1176 Staphylococcus aureus RF122 hypothetical protein YP_416654.1 1280574 D 273036 CDS YP_416655.1 82750914 3794540 1282401..1282601 1 NC_007622.1 hypothetical protein 1282601 3794540 SAB1177 Staphylococcus aureus RF122 hypothetical protein YP_416655.1 1282401 D 273036 CDS YP_416656.1 82750915 3794541 complement(1283647..1284702) 1 NC_007622.1 hypothetical protein 1284702 3794541 SAB1178c Staphylococcus aureus RF122 hypothetical protein YP_416656.1 1283647 R 273036 CDS YP_416657.1 82750916 3794542 1284942..1285139 1 NC_007622.1 hypothetical protein 1285139 3794542 SAB1179 Staphylococcus aureus RF122 hypothetical protein YP_416657.1 1284942 D 273036 CDS YP_416658.1 82750917 3794543 1285196..1286677 1 NC_007622.1 cardiolipin synthase 1286677 3794543 SAB1180 Staphylococcus aureus RF122 cardiolipin synthase YP_416658.1 1285196 D 273036 CDS YP_416659.1 82750918 3794544 complement(1287063..1287251) 1 NC_007622.1 hypothetical protein 1287251 3794544 SAB1181c Staphylococcus aureus RF122 hypothetical protein YP_416659.1 1287063 R 273036 CDS YP_416660.1 82750919 3793627 1287390..1287923 1 NC_007622.1 thermonuclease 1287923 nucI 3793627 nucI Staphylococcus aureus RF122 thermonuclease YP_416660.1 1287390 D 273036 CDS YP_416661.1 82750920 3794545 complement(1288064..1288918) 1 NC_007622.1 hypothetical protein 1288918 3794545 SAB1183c Staphylococcus aureus RF122 hypothetical protein YP_416661.1 1288064 R 273036 CDS YP_416662.1 82750921 3794546 1289234..1289824 1 NC_007622.1 hypothetical protein 1289824 3794546 SAB1184 Staphylococcus aureus RF122 hypothetical protein YP_416662.1 1289234 D 273036 CDS YP_416663.1 82750922 3794547 complement(1289878..1291260) 1 NC_007622.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 1291260 3794547 SAB1185c Staphylococcus aureus RF122 aspartate kinase YP_416663.1 1289878 R 273036 CDS YP_416664.1 82750923 3794548 1291451..1292731 1 NC_007622.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1292731 3794548 SAB1186 Staphylococcus aureus RF122 homoserine dehydrogenase YP_416664.1 1291451 D 273036 CDS YP_416665.1 82750924 3794327 1292737..1293798 1 NC_007622.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1293798 thrC 3794327 thrC Staphylococcus aureus RF122 threonine synthase YP_416665.1 1292737 D 273036 CDS YP_416666.1 82750925 3794326 1293800..1294714 1 NC_007622.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1294714 thrB 3794326 thrB Staphylococcus aureus RF122 homoserine kinase YP_416666.1 1293800 D 273036 CDS YP_416667.1 82750926 3794549 1294772..1295575 1 NC_007622.1 hypothetical protein 1295575 3794549 SAB1189 Staphylococcus aureus RF122 hypothetical protein YP_416667.1 1294772 D 273036 CDS YP_416668.1 82750927 3794550 complement(1295904..1296218) 1 NC_007622.1 hypothetical protein 1296218 3794550 SAB1190c Staphylococcus aureus RF122 hypothetical protein YP_416668.1 1295904 R 273036 CDS YP_416669.1 82750928 3794551 complement(1296436..1297890) 1 NC_007622.1 amino acid permease 1297890 3794551 SAB1191c Staphylococcus aureus RF122 amino acid permease YP_416669.1 1296436 R 273036 CDS YP_416670.1 82750929 3794552 1298088..1299611 1 NC_007622.1 catalase 1299611 3794552 SAB1192 Staphylococcus aureus RF122 catalase YP_416670.1 1298088 D 273036 CDS YP_416671.2 161777619 3792923 1299702..1299851 1 NC_007622.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1299851 rpmG 3792923 rpmG Staphylococcus aureus RF122 50S ribosomal protein L33 YP_416671.2 1299702 D 273036 CDS YP_416672.1 82750931 3794989 1300305..1300574 1 NC_007622.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1300574 rpsN 3794989 rpsN Staphylococcus aureus RF122 30S ribosomal protein S14 YP_416672.1 1300305 D 273036 CDS YP_416673.1 82750932 3794553 1300731..1301708 1 NC_007622.1 guanosine 5'-monophosphate oxidoreductase 1301708 3794553 SAB1195 Staphylococcus aureus RF122 guanosine 5'-monophosphate oxidoreductase YP_416673.1 1300731 D 273036 CDS YP_416674.1 82750933 3794483 complement(1303125..1303748) 1 NC_007622.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1303748 dinR 3794483 dinR Staphylococcus aureus RF122 LexA repressor YP_416674.1 1303125 R 273036 CDS YP_416675.1 82750934 3793055 1303888..1304124 1 NC_007622.1 hypothetical protein 1304124 3793055 SAB1198 Staphylococcus aureus RF122 hypothetical protein YP_416675.1 1303888 D 273036 CDS YP_416676.1 82750935 3793056 1304261..1304500 1 NC_007622.1 hypothetical protein 1304500 3793056 SAB1199 Staphylococcus aureus RF122 hypothetical protein YP_416676.1 1304261 D 273036 CDS YP_416677.1 82750936 3793057 1304621..1306609 1 NC_007622.1 transketolase 1306609 3793057 SAB1200 Staphylococcus aureus RF122 transketolase YP_416677.1 1304621 D 273036 CDS YP_416678.1 82750937 3793058 1306887..1307129 1 NC_007622.1 hypothetical protein 1307129 3793058 SAB1201 Staphylococcus aureus RF122 hypothetical protein YP_416678.1 1306887 D 273036 CDS YP_416679.1 82750938 3793059 1307308..1307775 1 NC_007622.1 hypothetical protein 1307775 3793059 SAB1202 Staphylococcus aureus RF122 hypothetical protein YP_416679.1 1307308 D 273036 CDS YP_416680.1 82750939 3793060 1307899..1309020 1 NC_007622.1 exonuclease 1309020 3793060 SAB1203 Staphylococcus aureus RF122 exonuclease YP_416680.1 1307899 D 273036 CDS YP_416681.1 82750940 3793061 1309024..1311996 1 NC_007622.1 exonuclease 1311996 3793061 SAB1204 Staphylococcus aureus RF122 exonuclease YP_416681.1 1309024 D 273036 CDS YP_416682.1 82750941 3793460 complement(1312124..1312486) 1 NC_007622.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 1312486 mscL 3793460 mscL Staphylococcus aureus RF122 large-conductance mechanosensitive channel YP_416682.1 1312124 R 273036 CDS YP_416683.1 82750942 3794111 1312690..1314336 1 NC_007622.1 glycine betaine transporter 1314336 opuD 3794111 opuD Staphylococcus aureus RF122 glycine betaine transporter YP_416683.1 1312690 D 273036 CDS YP_416684.1 82750943 3794415 1314926..1317631 1 NC_007622.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1317631 citB 3794415 citB Staphylococcus aureus RF122 aconitate hydratase YP_416684.1 1314926 D 273036 CDS YP_416685.1 82750944 3793062 1317810..1318277 1 NC_007622.1 hypothetical protein 1318277 3793062 SAB1208 Staphylococcus aureus RF122 hypothetical protein YP_416685.1 1317810 D 273036 CDS YP_416686.1 82750945 3793063 complement(1318484..1318780) 1 NC_007622.1 hypothetical protein 1318780 3793063 SAB1209c Staphylococcus aureus RF122 hypothetical protein YP_416686.1 1318484 R 273036 CDS YP_416687.1 82750946 3793064 complement(1319158..1319766) 1 NC_007622.1 hypothetical protein 1319766 3793064 SAB1210c Staphylococcus aureus RF122 hypothetical protein YP_416687.1 1319158 R 273036 CDS YP_416688.1 82750947 3794232 1319966..1321963 1 NC_007622.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1321963 grlB 3794232 grlB Staphylococcus aureus RF122 DNA topoisomerase IV subunit B YP_416688.1 1319966 D 273036 CDS YP_416689.1 82750948 3794231 1321963..1324365 1 NC_007622.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1324365 grlA 3794231 grlA Staphylococcus aureus RF122 DNA topoisomerase IV subunit A YP_416689.1 1321963 D 273036 CDS YP_416690.1 82750949 3793065 1324615..1326081 1 NC_007622.1 amino acid carrier protein 1326081 3793065 SAB1213 Staphylococcus aureus RF122 amino acid carrier protein YP_416690.1 1324615 D 273036 CDS YP_416691.1 82750950 3793066 1326571..1327422 1 NC_007622.1 transcription antiterminator 1327422 3793066 SAB1214 Staphylococcus aureus RF122 transcription antiterminator YP_416691.1 1326571 D 273036 CDS YP_416692.1 82750951 3793067 1327557..1328765 1 NC_007622.1 hypothetical protein 1328765 3793067 SAB1215 Staphylococcus aureus RF122 hypothetical protein YP_416692.1 1327557 D 273036 CDS YP_416693.1 82750952 3793454 1329247..1331769 1 NC_007622.1 hypothetical protein 1331769 mprF 3793454 mprF Staphylococcus aureus RF122 hypothetical protein YP_416693.1 1329247 D 273036 CDS YP_416694.1 82750953 3793462 complement(1331972..1332481) 1 NC_007622.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1332481 msrA1 3793462 msrA1 Staphylococcus aureus RF122 methionine sulfoxide reductase A YP_416694.1 1331972 R 273036 CDS YP_416695.1 82750954 3793068 1332618..1333601 1 NC_007622.1 peptide methionine sulfoxide reductase regulator 1333601 3793068 SAB1218 Staphylococcus aureus RF122 peptide methionine sulfoxide reductase regulator YP_416695.1 1332618 D 273036 CDS YP_416696.1 82750955 3793069 1334022..1335284 1 NC_007622.1 DNA damage repair protein 1335284 3793069 SAB1219 Staphylococcus aureus RF122 DNA damage repair protein YP_416696.1 1334022 D 273036 CDS YP_416697.1 82750956 3793070 complement(1335421..1336512) 1 NC_007622.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 1336512 3793070 SAB1220c Staphylococcus aureus RF122 prephenate dehydrogenase YP_416697.1 1335421 R 273036 CDS YP_416698.1 82750957 3793071 1336677..1337708 1 NC_007622.1 peptidase 1337708 3793071 SAB1221 Staphylococcus aureus RF122 peptidase YP_416698.1 1336677 D 273036 CDS YP_416699.1 82750958 3795123 1338201..1339607 1 NC_007622.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 1339607 trpE 3795123 trpE Staphylococcus aureus RF122 anthranilate synthase component I YP_416699.1 1338201 D 273036 CDS YP_416700.1 82750959 3795125 1339604..1340170 1 NC_007622.1 anthranilate synthase component II 1340170 trpG 3795125 trpG Staphylococcus aureus RF122 anthranilate synthase component II YP_416700.1 1339604 D 273036 CDS YP_416701.1 82750960 3795122 1340167..1341174 1 NC_007622.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1341174 trpD 3795122 trpD Staphylococcus aureus RF122 anthranilate phosphoribosyltransferase YP_416701.1 1340167 D 273036 CDS YP_416702.1 82750961 3795121 1341176..1341958 1 NC_007622.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 1341958 trpC 3795121 trpC Staphylococcus aureus RF122 indole-3-glycerol-phosphate synthase YP_416702.1 1341176 D 273036 CDS YP_416703.1 82750962 3795124 1341958..1342590 1 NC_007622.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 1342590 trpF 3795124 trpF Staphylococcus aureus RF122 N-(5'-phosphoribosyl)anthranilate isomerase YP_416703.1 1341958 D 273036 CDS YP_416704.1 82750963 3795061 1342583..1343797 1 NC_007622.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1343797 trpB 3795061 trpB Staphylococcus aureus RF122 tryptophan synthase subunit beta YP_416704.1 1342583 D 273036 CDS YP_416705.1 82750964 3795060 1343790..1344518 1 NC_007622.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1344518 trpA 3795060 trpA Staphylococcus aureus RF122 tryptophan synthase subunit alpha YP_416705.1 1343790 D 273036 CDS YP_416706.1 82750965 3793366 1344801..1346102 1 NC_007622.1 factor essential for expression of methicillin resistance 1346102 femA 3793366 femA Staphylococcus aureus RF122 factor essential for expression of methicillin resistance YP_416706.1 1344801 D 273036 CDS YP_416707.1 82750966 3793367 1346121..1347380 1 NC_007622.1 methicillin resistance factor protein 1347380 femB 3793367 femB Staphylococcus aureus RF122 methicillin resistance factor protein YP_416707.1 1346121 D 273036 CDS YP_416708.1 82750967 3793072 1347667..1348413 1 NC_007622.1 hypothetical protein 1348413 3793072 SAB1231 Staphylococcus aureus RF122 hypothetical protein YP_416708.1 1347667 D 273036 CDS YP_416709.1 82750968 3793073 1348653..1349039 1 NC_007622.1 hypothetical protein 1349039 3793073 SAB1232 Staphylococcus aureus RF122 hypothetical protein YP_416709.1 1348653 D 273036 CDS YP_416710.1 82750969 3793855 complement(1349241..1349714) 1 NC_007622.1 hypothetical protein 1349714 3793855 SAB1233c Staphylococcus aureus RF122 hypothetical protein YP_416710.1 1349241 R 273036 CDS YP_416711.1 82750970 3793856 complement(1349838..1350539) 1 NC_007622.1 oligopeptide transporter ATPase 1350539 3793856 SAB1234c Staphylococcus aureus RF122 oligopeptide transporter ATPase YP_416711.1 1349838 R 273036 CDS YP_416712.1 82750971 3793857 complement(1350532..1351305) 1 NC_007622.1 oligopeptide transporter ATPase 1351305 3793857 SAB1235c Staphylococcus aureus RF122 oligopeptide transporter ATPase YP_416712.1 1350532 R 273036 CDS YP_416713.1 82750972 3793858 complement(1351292..1352122) 1 NC_007622.1 oligopeptide membrane permease 1352122 3793858 SAB1236c Staphylococcus aureus RF122 oligopeptide membrane permease YP_416713.1 1351292 R 273036 CDS YP_416714.1 82750973 3793859 complement(1352115..1353101) 1 NC_007622.1 oligopeptide membrane permease 1353101 3793859 SAB1237c Staphylococcus aureus RF122 oligopeptide membrane permease YP_416714.1 1352115 R 273036 CDS YP_416715.1 82750974 3793860 complement(1353231..1353443) 1 NC_007622.1 hypothetical protein 1353443 3793860 SAB1238c Staphylococcus aureus RF122 hypothetical protein YP_416715.1 1353231 R 273036 CDS YP_416716.1 82750975 3793861 complement(1353406..1353750) 1 NC_007622.1 hypothetical protein 1353750 3793861 SAB1239c Staphylococcus aureus RF122 hypothetical protein YP_416716.1 1353406 R 273036 CDS YP_416717.1 82750976 3793862 1353955..1355769 1 NC_007622.1 oligoendopeptidase F 1355769 3793862 SAB1240 Staphylococcus aureus RF122 oligoendopeptidase F YP_416717.1 1353955 D 273036 CDS YP_416718.1 82750977 3793863 complement(1355911..1356552) 1 NC_007622.1 phosphate transporter PhoU 1356552 3793863 SAB1241c Staphylococcus aureus RF122 phosphate transporter PhoU YP_416718.1 1355911 R 273036 CDS YP_416719.1 82750978 3793864 complement(1356559..1357410) 1 NC_007622.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1357410 3793864 SAB1242c Staphylococcus aureus RF122 phosphate transporter ATP-binding protein YP_416719.1 1356559 R 273036 CDS YP_416720.1 82750979 3793865 complement(1357457..1358374) 1 NC_007622.1 phosphate ABC transporter permease 1358374 3793865 SAB1243c Staphylococcus aureus RF122 phosphate ABC transporter permease YP_416720.1 1357457 R 273036 CDS YP_416721.1 82750980 3793866 complement(1358376..1359302) 1 NC_007622.1 phosphate ABC transporter permease 1359302 3793866 SAB1244c Staphylococcus aureus RF122 phosphate ABC transporter permease YP_416721.1 1358376 R 273036 CDS YP_416722.1 82750981 3793867 complement(1359493..1360476) 1 NC_007622.1 phosphate-binding lipoprotein 1360476 3793867 SAB1245c Staphylococcus aureus RF122 phosphate-binding lipoprotein YP_416722.1 1359493 R 273036 CDS YP_416723.1 82750982 3793868 complement(1360848..1361750) 1 NC_007622.1 hypothetical protein 1361750 3793868 SAB1246c Staphylococcus aureus RF122 hypothetical protein YP_416723.1 1360848 R 273036 CDS YP_416724.1 82750983 3793869 1361896..1363497 1 NC_007622.1 ATP-binding ABC transporter protein 1363497 3793869 SAB1247 Staphylococcus aureus RF122 ATP-binding ABC transporter protein YP_416724.1 1361896 D 273036 CDS YP_416725.1 82750984 3794762 1364269..1365474 1 NC_007622.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1365474 lysC 3794762 lysC Staphylococcus aureus RF122 aspartate kinase YP_416725.1 1364269 D 273036 CDS YP_416726.1 82750985 3794957 1365538..1366527 1 NC_007622.1 aspartate semialdehyde dehydrogenase 1366527 asd 3794957 asd Staphylococcus aureus RF122 aspartate semialdehyde dehydrogenase YP_416726.1 1365538 D 273036 CDS YP_416727.1 82750986 3795289 1366529..1367416 1 NC_007622.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1367416 dapA 3795289 dapA Staphylococcus aureus RF122 dihydrodipicolinate synthase YP_416727.1 1366529 D 273036 CDS YP_416728.1 82750987 3795290 1367413..1368135 1 NC_007622.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1368135 dapB 3795290 dapB Staphylococcus aureus RF122 dihydrodipicolinate reductase YP_416728.1 1367413 D 273036 CDS YP_416729.1 82750988 3795291 1368162..1368881 1 NC_007622.1 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1368881 dapD 3795291 dapD Staphylococcus aureus RF122 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase YP_416729.1 1368162 D 273036 CDS YP_416730.1 82750989 3793870 1369024..1370175 1 NC_007622.1 peptidase 1370175 3793870 SAB1253 Staphylococcus aureus RF122 peptidase YP_416730.1 1369024 D 273036 CDS YP_416731.1 82750990 3794898 1370180..1371265 1 NC_007622.1 alanine racemase 1371265 alr 3794898 alr Staphylococcus aureus RF122 alanine racemase YP_416731.1 1370180 D 273036 CDS YP_416732.1 82750991 3794761 1371255..1372520 1 NC_007622.1 diaminopimelate decarboxylase 1372520 lysA 3794761 lysA Staphylococcus aureus RF122 diaminopimelate decarboxylase YP_416732.1 1371255 D 273036 CDS YP_416733.1 82750992 3793871 complement(1372614..1373231) 1 NC_007622.1 transcriptional regulator 1373231 3793871 SAB1256c Staphylococcus aureus RF122 transcriptional regulator YP_416733.1 1372614 R 273036 CDS YP_416734.1 82750993 3793872 complement(1373365..1373766) 1 NC_007622.1 hypothetical protein 1373766 3793872 SAB1257c Staphylococcus aureus RF122 hypothetical protein YP_416734.1 1373365 R 273036 CDS YP_416735.1 82750994 3795275 complement(1373964..1374164) 1 NC_007622.1 cold shock protein 1374164 cspA 3795275 cspA Staphylococcus aureus RF122 cold shock protein YP_416735.1 1373964 R 273036 CDS YP_416736.1 82750995 3793873 complement(1374335..1374643) 1 NC_007622.1 hypothetical protein 1374643 3793873 SAB1259c Staphylococcus aureus RF122 hypothetical protein YP_416736.1 1374335 R 273036 CDS YP_416737.1 82750996 3793874 1374802..1375071 1 NC_007622.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1375071 3793874 SAB1260 Staphylococcus aureus RF122 acylphosphatase YP_416737.1 1374802 D 273036 CDS YP_416738.1 82750997 3793427 1375090..1375719 1 NC_007622.1 hypothetical protein 1375719 3793427 SAB1261 Staphylococcus aureus RF122 hypothetical protein YP_416738.1 1375090 D 273036 CDS YP_416739.1 82750998 3793428 1375751..1376887 1 NC_007622.1 toxic ion resistance protein 1376887 3793428 SAB1262 Staphylococcus aureus RF122 toxic ion resistance protein YP_416739.1 1375751 D 273036 CDS YP_416740.1 82750999 3793429 complement(1376961..1378304) 1 NC_007622.1 branched-chain amino acid carrier II protein 1378304 3793429 SAB1263c Staphylococcus aureus RF122 branched-chain amino acid carrier II protein YP_416740.1 1376961 R 273036 CDS YP_416741.1 82751000 3793430 complement(1378529..1380415) 1 NC_007622.1 hypothetical protein 1380415 3793430 SAB1264c Staphylococcus aureus RF122 hypothetical protein YP_416741.1 1378529 R 273036 CDS YP_416742.1 82751001 3793431 complement(1380429..1381220) 1 NC_007622.1 nitric oxide reductase protein 1381220 3793431 SAB1265c Staphylococcus aureus RF122 nitric oxide reductase protein YP_416742.1 1380429 R 273036 CDS YP_416743.1 82751002 3793432 complement(1381401..1381604) 1 NC_007622.1 hypothetical protein 1381604 3793432 SAB1266c Staphylococcus aureus RF122 hypothetical protein YP_416743.1 1381401 R 273036 CDS YP_416744.1 82751003 3793433 complement(1381632..1382441) 1 NC_007622.1 hypothetical protein 1382441 3793433 SAB1267c Staphylococcus aureus RF122 hypothetical protein YP_416744.1 1381632 R 273036 CDS YP_416745.1 82751004 3793632 complement(1383021..1384289) 1 NC_007622.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1384289 odhB 3793632 odhB Staphylococcus aureus RF122 dihydrolipoamide succinyltransferase YP_416745.1 1383021 R 273036 CDS YP_416746.1 82751005 3793631 complement(1384303..1387101) 1 NC_007622.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1387101 sucA 3793631 sucA Staphylococcus aureus RF122 2-oxoglutarate dehydrogenase E1 component YP_416746.1 1384303 R 273036 CDS YP_416747.1 82751006 3794949 complement(1387390..1388745) 1 NC_007622.1 two-component sensor histidine kinase 1388745 arlS 3794949 arlS Staphylococcus aureus RF122 two-component sensor histidine kinase YP_416747.1 1387390 R 273036 CDS YP_416748.1 82751007 3794948 complement(1388742..1389401) 1 NC_007622.1 two-component response regulator 1389401 arlR 3794948 arlR Staphylococcus aureus RF122 two-component response regulator YP_416748.1 1388742 R 273036 CDS YP_416749.1 82751008 3793434 complement(1390486..1391100) 1 NC_007622.1 hypothetical protein 1391100 3793434 SAB1272c Staphylococcus aureus RF122 hypothetical protein YP_416749.1 1390486 R 273036 CDS YP_416750.1 82751009 3794131 complement(1391117..1392187) 1 NC_007622.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1392187 murG 3794131 murG Staphylococcus aureus RF122 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_416750.1 1391117 R 273036 CDS YP_416751.1 82751010 3793435 complement(1392199..1392708) 1 NC_007622.1 hypothetical protein 1392708 3793435 SAB1274c Staphylococcus aureus RF122 hypothetical protein YP_416751.1 1392199 R 273036 CDS YP_416752.1 82751011 3793436 complement(1393108..1394598) 1 NC_007622.1 carboxy-terminal processing proteinase 1394598 3793436 SAB1275c Staphylococcus aureus RF122 carboxy-terminal processing proteinase YP_416752.1 1393108 R 273036 CDS YP_416753.1 82751012 3793437 complement(1394780..1395001) 1 NC_007622.1 hypothetical protein 1395001 3793437 SAB1276c Staphylococcus aureus RF122 hypothetical protein YP_416753.1 1394780 R 273036 CDS YP_416754.1 82751013 3793438 complement(1395001..1395501) 1 NC_007622.1 phosphotransferase system glucose-specific IIA component 1395501 3793438 SAB1277c Staphylococcus aureus RF122 phosphotransferase system glucose-specific IIA component YP_416754.1 1395001 R 273036 CDS YP_416755.1 82751014 3793439 complement(1395513..1395941) 1 NC_007622.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1395941 3793439 SAB1278c Staphylococcus aureus RF122 methionine sulfoxide reductase B YP_416755.1 1395513 R 273036 CDS YP_416756.1 82751015 3793461 complement(1395934..1396467) 1 NC_007622.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1396467 msrA 3793461 msrA Staphylococcus aureus RF122 methionine sulfoxide reductase A YP_416756.1 1395934 R 273036 CDS YP_416757.1 82751016 3793440 complement(1396553..1397392) 1 NC_007622.1 hypothetical protein 1397392 3793440 SAB1280c Staphylococcus aureus RF122 hypothetical protein YP_416757.1 1396553 R 273036 CDS YP_416758.1 82751017 3794481 complement(1397407..1397886) 1 NC_007622.1 dihydrofolate reductase 1397886 dfrB 3794481 dfrB Staphylococcus aureus RF122 dihydrofolate reductase YP_416758.1 1397407 R 273036 CDS YP_416759.1 82751018 3794329 complement(1398086..1399042) 1 NC_007622.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1399042 thyA 3794329 thyA Staphylococcus aureus RF122 thymidylate synthase YP_416759.1 1398086 R 273036 CDS YP_416760.1 82751019 3793441 complement(1399466..1399903) 1 NC_007622.1 hypothetical protein 1399903 3793441 SAB1283c Staphylococcus aureus RF122 hypothetical protein YP_416760.1 1399466 R 273036 CDS YP_416761.1 82751020 3793442 complement(1399919..1401043) 1 NC_007622.1 hypothetical protein 1401043 3793442 SAB1284c Staphylococcus aureus RF122 hypothetical protein YP_416761.1 1399919 R 273036 CDS YP_416762.1 82751021 3793443 complement(1401081..1401332) 1 NC_007622.1 hypothetical protein 1401332 3793443 SAB1285c Staphylococcus aureus RF122 hypothetical protein YP_416762.1 1401081 R 273036 CDS YP_416763.1 82751022 3793444 complement(1401344..1401538) 1 NC_007622.1 hypothetical protein 1401538 3793444 SAB1286c Staphylococcus aureus RF122 hypothetical protein YP_416763.1 1401344 R 273036 CDS YP_416764.1 82751023 3793445 1401783..1402487 1 NC_007622.1 hypothetical protein 1402487 3793445 SAB1287 Staphylococcus aureus RF122 hypothetical protein YP_416764.1 1401783 D 273036 CDS YP_416765.1 82751024 3793776 1402728..1403129 1 NC_007622.1 cell wall enzyme 1403129 3793776 SAB1288 Staphylococcus aureus RF122 cell wall enzyme YP_416765.1 1402728 D 273036 CDS YP_416766.1 82751025 3793777 complement(1403175..1408925) 1 NC_007622.1 truncated cell surface fibronectin-binding protein 1408925 3793777 SAB1289c Staphylococcus aureus RF122 truncated cell surface fibronectin-binding protein YP_416766.1 1403175 R 273036 CDS YP_416767.1 82751026 3793778 complement(1408971..1410803) 1 NC_007622.1 truncated cell surface fibronectin-binding protein 1410803 3793778 SAB1290c Staphylococcus aureus RF122 truncated cell surface fibronectin-binding protein YP_416767.1 1408971 R 273036 CDS YP_416768.1 82751027 3793779 complement(1410800..1415167) 1 NC_007622.1 truncated cell surface fibronectin-binding protein 1415167 3793779 SAB1291c Staphylococcus aureus RF122 truncated cell surface fibronectin-binding protein YP_416768.1 1410800 R 273036 CDS YP_416769.1 82751028 3793780 complement(1415268..1416185) 1 NC_007622.1 truncated cell surface fibronectin-binding protein 1416185 3793780 SAB1292c Staphylococcus aureus RF122 truncated cell surface fibronectin-binding protein YP_416769.1 1415268 R 273036 CDS YP_416770.1 82751029 3793781 complement(1416357..1416749) 1 NC_007622.1 truncated cell surface fibronectin-binding protein 1416749 3793781 SAB1293c Staphylococcus aureus RF122 truncated cell surface fibronectin-binding protein YP_416770.1 1416357 R 273036 CDS YP_416771.1 82751030 3793783 1417124..1417303 1 NC_007622.1 hypothetical protein 1417303 3793783 SAB1295 Staphylococcus aureus RF122 hypothetical protein YP_416771.1 1417124 D 273036 CDS YP_416772.1 82751031 3793784 complement(1418565..1419536) 1 NC_007622.1 alcohol dehydrogenase 1419536 3793784 SAB1296c Staphylococcus aureus RF122 alcohol dehydrogenase YP_416772.1 1418565 R 273036 CDS YP_416773.1 82751032 3793785 1419659..1420078 1 NC_007622.1 hypothetical protein 1420078 3793785 SAB1297 Staphylococcus aureus RF122 hypothetical protein YP_416773.1 1419659 D 273036 CDS YP_416774.1 82751033 3793786 1420349..1420960 1 NC_007622.1 recombinase 1420960 3793786 SAB1298 Staphylococcus aureus RF122 recombinase YP_416774.1 1420349 D 273036 CDS YP_416775.1 82751034 3793787 1421380..1422054 1 NC_007622.1 transposase for IS-like element 1422054 3793787 SAB1299 Staphylococcus aureus RF122 transposase for IS-like element YP_416775.1 1421380 D 273036 CDS YP_416776.1 82751035 3793788 complement(1422064..1423005) 1 NC_007622.1 truncated cell surface fibronectin-binding protein 1423005 3793788 SAB1300c Staphylococcus aureus RF122 truncated cell surface fibronectin-binding protein YP_416776.1 1422064 R 273036 CDS YP_416777.1 82751036 3793789 complement(1423403..1424923) 1 NC_007622.1 transmembrane efflux protein 1424923 3793789 SAB1301c Staphylococcus aureus RF122 transmembrane efflux protein YP_416777.1 1423403 R 273036 CDS YP_416778.1 82751037 3793790 complement(1425156..1426271) 1 NC_007622.1 amino acid ABC transporter permease 1426271 3793790 SAB1302c Staphylococcus aureus RF122 amino acid ABC transporter permease YP_416778.1 1425156 R 273036 CDS YP_416779.1 82751038 3793325 complement(1426440..1427342) 1 NC_007622.1 threonine dehydratase 1427342 tdcB 3793325 tdcB Staphylococcus aureus RF122 threonine dehydratase YP_416779.1 1426440 R 273036 CDS YP_416780.1 82751039 3794895 complement(1427437..1428555) 1 NC_007622.1 alanine dehydrogenase 1428555 ald 3794895 ald Staphylococcus aureus RF122 alanine dehydrogenase YP_416780.1 1427437 R 273036 CDS YP_416781.1 82751040 3793791 complement(1429029..1429907) 1 NC_007622.1 5'-3' exonuclease 1429907 3793791 SAB1305c Staphylococcus aureus RF122 5'-3' exonuclease YP_416781.1 1429029 R 273036 CDS YP_416782.1 82751041 3793792 complement(1429927..1433367) 1 NC_007622.1 hypothetical protein 1433367 3793792 SAB1306c Staphylococcus aureus RF122 hypothetical protein YP_416782.1 1429927 R 273036 CDS YP_416783.1 82751042 3793793 1433671..1435011 1 NC_007622.1 hypothetical protein 1435011 3793793 SAB1307 Staphylococcus aureus RF122 hypothetical protein YP_416783.1 1433671 D 273036 CDS YP_416784.1 82751043 3793794 complement(1435170..1435502) 1 NC_007622.1 hypothetical protein 1435502 3793794 SAB1308c Staphylococcus aureus RF122 hypothetical protein YP_416784.1 1435170 R 273036 CDS YP_416785.1 82751044 3793795 complement(1435586..1436731) 1 NC_007622.1 hypothetical protein 1436731 3793795 SAB1309c Staphylococcus aureus RF122 hypothetical protein YP_416785.1 1435586 R 273036 CDS YP_416786.1 82751045 3792939 complement(1437383..1437727) 1 NC_007622.1 hypothetical protein 1437727 3792939 SAB1310c Staphylococcus aureus RF122 hypothetical protein YP_416786.1 1437383 R 273036 CDS YP_416787.1 82751046 3792940 complement(1437741..1438304) 1 NC_007622.1 hypothetical protein 1438304 3792940 SAB1311c Staphylococcus aureus RF122 hypothetical protein YP_416787.1 1437741 R 273036 CDS YP_416788.1 82751047 3792941 complement(1438297..1438647) 1 NC_007622.1 hypothetical protein 1438647 3792941 SAB1312c Staphylococcus aureus RF122 hypothetical protein YP_416788.1 1438297 R 273036 CDS YP_416789.1 82751048 3794276 1439187..1439813 1 NC_007622.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1439813 recU 3794276 recU Staphylococcus aureus RF122 Holliday junction-specific endonuclease YP_416789.1 1439187 D 273036 CDS YP_416790.1 82751049 3794117 1439810..1441993 1 NC_007622.1 penicillin-binding protein 2 1441993 pbp2 3794117 pbp2 Staphylococcus aureus RF122 penicillin-binding protein 2 YP_416790.1 1439810 D 273036 CDS YP_416791.1 82751050 3792942 complement(1442501..1442842) 1 NC_007622.1 hypothetical protein 1442842 3792942 SAB1315c Staphylococcus aureus RF122 hypothetical protein YP_416791.1 1442501 R 273036 CDS YP_416792.1 82751051 3792943 complement(1442847..1443506) 1 NC_007622.1 endonuclease III-like protein 1443506 3792943 SAB1316c Staphylococcus aureus RF122 endonuclease III-like protein YP_416792.1 1442847 R 273036 CDS YP_416793.1 82751052 3792944 complement(1443496..1444182) 1 NC_007622.1 DNA replication initiation protein 1444182 3792944 SAB1317c Staphylococcus aureus RF122 DNA replication initiation protein YP_416793.1 1443496 R 273036 CDS YP_416794.1 82751053 3794958 complement(1444510..1445802) 1 NC_007622.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1445802 asnC 3794958 asnC Staphylococcus aureus RF122 asparaginyl-tRNA synthetase YP_416794.1 1444510 R 273036 CDS YP_416795.1 82751054 3794482 complement(1446123..1448816) 1 NC_007622.1 ATP-dependent DNA helicase 1448816 dinG 3794482 dinG Staphylococcus aureus RF122 ATP-dependent DNA helicase YP_416795.1 1446123 R 273036 CDS YP_416796.1 82751055 3792661 complement(1448840..1449811) 1 NC_007622.1 bifunctional biotin operon-related protein and biotin-acetyl-CoA-carboxylase 1449811 birA 3792661 birA Staphylococcus aureus RF122 bifunctional biotin operon-related protein and biotin-acetyl-CoA-carboxylase YP_416796.1 1448840 R 273036 CDS YP_416797.1 82751056 3794116 complement(1449798..1451000) 1 NC_007622.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 1451000 papS 3794116 papS Staphylococcus aureus RF122 tRNA CCA-pyrophosphorylase YP_416797.1 1449798 R 273036 CDS YP_416798.1 82751057 3792945 complement(1451005..1452147) 1 NC_007622.1 glycosyltransferase 1452147 3792945 SAB1322c Staphylococcus aureus RF122 glycosyltransferase YP_416798.1 1451005 R 273036 CDS YP_416799.1 82751058 3792946 complement(1452405..1452722) 1 NC_007622.1 hypothetical protein 1452722 3792946 SAB1323c Staphylococcus aureus RF122 hypothetical protein YP_416799.1 1452405 R 273036 CDS YP_416800.1 82751059 3792947 complement(1453058..1453756) 1 NC_007622.1 hypothetical protein 1453756 3792947 SAB1324c Staphylococcus aureus RF122 hypothetical protein YP_416800.1 1453058 R 273036 CDS YP_416801.1 82751060 3792948 complement(1453810..1454316) 1 NC_007622.1 hypothetical protein 1454316 3792948 SAB1325c Staphylococcus aureus RF122 hypothetical protein YP_416801.1 1453810 R 273036 CDS YP_416802.1 82751061 3792949 complement(1454387..1454965) 1 NC_007622.1 hypothetical protein 1454965 3792949 SAB1326c Staphylococcus aureus RF122 hypothetical protein YP_416802.1 1454387 R 273036 CDS YP_416803.1 82751062 3792950 complement(1454976..1456220) 1 NC_007622.1 hypothetical protein 1456220 3792950 SAB1327c Staphylococcus aureus RF122 hypothetical protein YP_416803.1 1454976 R 273036 CDS YP_416804.1 82751063 3794950 complement(1456227..1457525) 1 NC_007622.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1457525 aroA 3794950 aroA Staphylococcus aureus RF122 3-phosphoshikimate 1-carboxyvinyltransferase YP_416804.1 1456227 R 273036 CDS YP_416805.1 82751064 3794952 complement(1457535..1458599) 1 NC_007622.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1458599 aroB 3794952 aroB Staphylococcus aureus RF122 3-dehydroquinate synthase YP_416805.1 1457535 R 273036 CDS YP_416806.1 82751065 3794953 complement(1458625..1459791) 1 NC_007622.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1459791 aroC 3794953 aroC Staphylococcus aureus RF122 chorismate synthase YP_416806.1 1458625 R 273036 CDS YP_416807.1 82751066 3792951 complement(1460260..1460709) 1 NC_007622.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1460709 ndk 3792951 ndk Staphylococcus aureus RF122 nucleoside diphosphate kinase YP_416807.1 1460260 R 273036 CDS YP_416808.1 82751067 3792952 complement(1460801..1461760) 1 NC_007622.1 heptaprenyl diphosphate syntase component II 1461760 3792952 SAB1332c Staphylococcus aureus RF122 heptaprenyl diphosphate syntase component II YP_416808.1 1460801 R 273036 CDS YP_416809.1 82751068 3792953 complement(1461762..1462487) 1 NC_007622.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1462487 ubiE 3792953 ubiE Staphylococcus aureus RF122 ubiquinone/menaquinone biosynthesis methyltransferase YP_416809.1 1461762 R 273036 CDS YP_416810.1 82751069 3792954 complement(1462490..1463062) 1 NC_007622.1 hypothetical protein 1463062 3792954 SAB1334c Staphylococcus aureus RF122 hypothetical protein YP_416810.1 1462490 R 273036 CDS YP_416811.1 82751070 3794094 complement(1463493..1463765) 1 NC_007622.1 DNA-binding protein II 1463765 hup 3794094 hup Staphylococcus aureus RF122 DNA-binding protein II YP_416811.1 1463493 R 273036 CDS YP_416812.1 82751071 3794229 complement(1463936..1464934) 1 NC_007622.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1464934 gpsA 3794229 gpsA Staphylococcus aureus RF122 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_416812.1 1463936 R 273036 CDS YP_416813.1 82751072 3792932 complement(1466484..1467659) 1 NC_007622.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1467659 rpsA 3792932 rpsA Staphylococcus aureus RF122 30S ribosomal protein S1 YP_416813.1 1466484 R 273036 CDS YP_416814.1 82751073 3792956 complement(1467916..1468107) 1 NC_007622.1 hypothetical protein 1468107 3792956 SAB1339c Staphylococcus aureus RF122 hypothetical protein YP_416814.1 1467916 R 273036 CDS YP_416815.1 82751074 3794837 complement(1468371..1469030) 1 NC_007622.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1469030 cmk 3794837 cmk Staphylococcus aureus RF122 cytidylate kinase YP_416815.1 1468371 R 273036 CDS YP_416816.1 82751075 3792957 1469107..1470075 1 NC_007622.1 L-asparaginase 1470075 3792957 SAB1341 Staphylococcus aureus RF122 L-asparaginase YP_416816.1 1469107 D 273036 CDS YP_416817.1 82751076 3793465 complement(1470190..1471317) 1 NC_007622.1 hypothetical protein 1471317 3793465 SAB1342c Staphylococcus aureus RF122 hypothetical protein YP_416817.1 1470190 R 273036 CDS YP_416818.1 82751077 3793354 complement(1471561..1473012) 1 NC_007622.1 cell surface elastin binding protein 1473012 ebpS 3793354 ebpS Staphylococcus aureus RF122 cell surface elastin binding protein YP_416818.1 1471561 R 273036 CDS YP_416819.1 82751078 3793466 complement(1473165..1474544) 1 NC_007622.1 ATP-dependent DNA helicase 1474544 3793466 SAB1344c Staphylococcus aureus RF122 ATP-dependent DNA helicase YP_416819.1 1473165 R 273036 CDS YP_416820.1 82751079 3793467 complement(1474534..1475487) 1 NC_007622.1 hypothetical protein 1475487 3793467 SAB1345c Staphylococcus aureus RF122 hypothetical protein YP_416820.1 1474534 R 273036 CDS YP_416821.1 82751080 3793468 1475595..1475843 1 NC_007622.1 ferredoxin 1475843 3793468 SAB1346 Staphylococcus aureus RF122 ferredoxin YP_416821.1 1475595 D 273036 CDS YP_416822.1 82751081 3793469 complement(1475949..1476494) 1 NC_007622.1 hypothetical protein 1476494 3793469 SAB1347c Staphylococcus aureus RF122 hypothetical protein YP_416822.1 1475949 R 273036 CDS YP_416823.1 82751082 3793470 complement(1477101..1478015) 1 NC_007622.1 lipoprotein 1478015 3793470 SAB1348c Staphylococcus aureus RF122 lipoprotein YP_416823.1 1477101 R 273036 CDS YP_416824.1 82751083 3793471 complement(1478106..1478930) 1 NC_007622.1 lipoprotein 1478930 3793471 SAB1349c Staphylococcus aureus RF122 lipoprotein YP_416824.1 1478106 R 273036 CDS YP_416825.1 82751084 3793472 complement(1479068..1480282) 1 NC_007622.1 hypothetical protein 1480282 3793472 SAB1350c Staphylococcus aureus RF122 hypothetical protein YP_416825.1 1479068 R 273036 CDS YP_416826.1 82751085 3793473 complement(1480269..1481141) 1 NC_007622.1 hypothetical protein 1481141 3793473 SAB1351c Staphylococcus aureus RF122 hypothetical protein YP_416826.1 1480269 R 273036 CDS YP_416827.1 82751086 3793011 complement(1481447..1483198) 1 NC_007622.1 respiratory response protein B 1483198 srrB 3793011 srrB Staphylococcus aureus RF122 respiratory response protein B YP_416827.1 1481447 R 273036 CDS YP_416828.1 82751087 3793101 complement(1484037..1484774) 1 NC_007622.1 ribosomal large subunit pseudouridine synthase B 1484774 rluB 3793101 rluB Staphylococcus aureus RF122 ribosomal large subunit pseudouridine synthase B YP_416828.1 1484037 R 273036 CDS YP_416829.1 82751088 3793475 complement(1485302..1486057) 1 NC_007622.1 hypothetical protein 1486057 3793475 SAB1356c Staphylococcus aureus RF122 hypothetical protein YP_416829.1 1485302 R 273036 CDS YP_416830.1 82751089 3793476 1486125..1486631 1 NC_007622.1 hypothetical protein 1486631 3793476 SAB1357 Staphylococcus aureus RF122 hypothetical protein YP_416830.1 1486125 D 273036 CDS YP_416831.1 82751090 3794176 complement(1486709..1487596) 1 NC_007622.1 site-specific recombinase 1487596 xerD 3794176 xerD Staphylococcus aureus RF122 site-specific recombinase YP_416831.1 1486709 R 273036 CDS YP_416832.1 82751091 3794347 complement(1487645..1488094) 1 NC_007622.1 iron transcriptional regulator 1488094 fur 3794347 fur Staphylococcus aureus RF122 iron transcriptional regulator YP_416832.1 1487645 R 273036 CDS YP_416833.1 82751092 3793477 complement(1488199..1488741) 1 NC_007622.1 ADP-ribose pyrophosphatase 1488741 3793477 SAB1360c Staphylococcus aureus RF122 ADP-ribose pyrophosphatase YP_416833.1 1488199 R 273036 CDS YP_416834.1 82751093 3793478 1488823..1489731 1 NC_007622.1 oxidoreductase 1489731 3793478 SAB1361 Staphylococcus aureus RF122 oxidoreductase YP_416834.1 1488823 D 273036 CDS YP_416835.1 82751094 3793479 complement(1489947..1490195) 1 NC_007622.1 hypothetical protein 1490195 3793479 SAB1362c Staphylococcus aureus RF122 hypothetical protein YP_416835.1 1489947 R 273036 CDS YP_416836.1 82751095 3793480 complement(1490211..1490966) 1 NC_007622.1 oxidoreductase 1490966 3793480 SAB1363c Staphylococcus aureus RF122 oxidoreductase YP_416836.1 1490211 R 273036 CDS YP_416837.1 82751096 3793481 1491108..1491923 1 NC_007622.1 pyrrolidine-5-carboxylate reductase 1491923 3793481 SAB1364 Staphylococcus aureus RF122 pyrrolidine-5-carboxylate reductase YP_416837.1 1491108 D 273036 CDS YP_416838.1 82751097 3793482 complement(1492028..1492948) 1 NC_007622.1 metallo-beta-lactamase 1492948 3793482 SAB1365c Staphylococcus aureus RF122 metallo-beta-lactamase YP_416838.1 1492028 R 273036 CDS YP_416839.1 82751098 3793483 1493261..1494745 1 NC_007622.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1494745 3793483 SAB1366 Staphylococcus aureus RF122 glucose-6-phosphate 1-dehydrogenase YP_416839.1 1493261 D 273036 CDS YP_416840.1 82751099 3793484 1494975..1495841 1 NC_007622.1 AraC family transcriptional regulator 1495841 3793484 SAB1367 Staphylococcus aureus RF122 AraC family transcriptional regulator YP_416840.1 1494975 D 273036 CDS YP_416841.1 82751100 3794768 complement(1495924..1497573) 1 NC_007622.1 alpha-D-1,4-glucosidase 1497573 malA 3794768 malA Staphylococcus aureus RF122 alpha-D-1,4-glucosidase YP_416841.1 1495924 R 273036 CDS YP_416842.1 82751101 3794769 complement(1497589..1498608) 1 NC_007622.1 maltose operon transcriptional repressor 1498608 malR 3794769 malR Staphylococcus aureus RF122 maltose operon transcriptional repressor YP_416842.1 1497589 R 273036 CDS YP_416843.1 82751102 3794360 complement(1498609..1498818) 1 NC_007622.1 hypothetical protein 1498818 3794360 SAB1370c Staphylococcus aureus RF122 hypothetical protein YP_416843.1 1498609 R 273036 CDS YP_416844.1 82751103 3794361 complement(1498802..1499173) 1 NC_007622.1 hypothetical protein 1499173 3794361 SAB1371c Staphylococcus aureus RF122 hypothetical protein YP_416844.1 1498802 R 273036 CDS YP_416845.1 82751104 3794362 complement(1499295..1499903) 1 NC_007622.1 protease 1499903 3794362 SAB1372c Staphylococcus aureus RF122 protease YP_416845.1 1499295 R 273036 CDS YP_416846.1 82751105 3794363 complement(1499878..1501203) 1 NC_007622.1 streptolysin-associated protein SagD-like protein 1501203 3794363 SAB1373c Staphylococcus aureus RF122 streptolysin-associated protein SagD-like protein YP_416846.1 1499878 R 273036 CDS YP_416847.1 82751106 3794364 complement(1501190..1501753) 1 NC_007622.1 hypothetical protein 1501753 3794364 SAB1374c Staphylococcus aureus RF122 hypothetical protein YP_416847.1 1501190 R 273036 CDS YP_416848.1 82751107 3794365 complement(1501772..1502119) 1 NC_007622.1 hypothetical protein 1502119 3794365 SAB1375c Staphylococcus aureus RF122 hypothetical protein YP_416848.1 1501772 R 273036 CDS YP_416849.1 82751108 3794366 complement(1502127..1502435) 1 NC_007622.1 streptolysin S-associated protein SagB-like protein 1502435 3794366 SAB1376c Staphylococcus aureus RF122 streptolysin S-associated protein SagB-like protein YP_416849.1 1502127 R 273036 CDS YP_416850.1 82751109 3794367 complement(1502495..1503007) 1 NC_007622.1 hypothetical protein 1503007 3794367 SAB1377c Staphylococcus aureus RF122 hypothetical protein YP_416850.1 1502495 R 273036 CDS YP_416851.1 82751110 3794368 complement(1503162..1503299) 1 NC_007622.1 hypothetical protein 1503299 3794368 SAB1378c Staphylococcus aureus RF122 hypothetical protein YP_416851.1 1503162 R 273036 CDS YP_416852.1 82751111 3794369 complement(1503308..1504042) 1 NC_007622.1 ABC transporter permease 1504042 3794369 SAB1379c Staphylococcus aureus RF122 ABC transporter permease YP_416852.1 1503308 R 273036 CDS YP_416853.1 82751112 3794370 complement(1504039..1504890) 1 NC_007622.1 ABC transporter 1504890 3794370 SAB1380c Staphylococcus aureus RF122 ABC transporter YP_416853.1 1504039 R 273036 CDS YP_416854.1 82751113 3794371 complement(1504962..1505114) 1 NC_007622.1 hypothetical protein 1505114 3794371 SAB1381c Staphylococcus aureus RF122 hypothetical protein YP_416854.1 1504962 R 273036 CDS YP_416855.1 82751114 3794372 1505329..1505463 1 NC_007622.1 hypothetical protein 1505463 3794372 SAB1382 Staphylococcus aureus RF122 hypothetical protein YP_416855.1 1505329 D 273036 CDS YP_416856.1 82751115 3794373 1505491..1505646 1 NC_007622.1 hypothetical protein 1505646 3794373 SAB1383 Staphylococcus aureus RF122 hypothetical protein YP_416856.1 1505491 D 273036 CDS YP_416857.1 82751116 3794225 complement(1505744..1507150) 1 NC_007622.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1507150 gnd 3794225 gnd Staphylococcus aureus RF122 6-phosphogluconate dehydrogenase YP_416857.1 1505744 R 273036 CDS YP_416858.1 82751117 3794374 complement(1507218..1508465) 1 NC_007622.1 peptidase T 1508465 3794374 SAB1385c Staphylococcus aureus RF122 peptidase T YP_416858.1 1507218 R 273036 CDS YP_416859.1 82751118 3794375 complement(1508920..1509900) 1 NC_007622.1 hypothetical protein 1509900 3794375 SAB1386c Staphylococcus aureus RF122 hypothetical protein YP_416859.1 1508920 R 273036 CDS YP_416860.1 82751119 3794376 complement(1509914..1510351) 1 NC_007622.1 hypothetical protein 1510351 3794376 SAB1387c Staphylococcus aureus RF122 hypothetical protein YP_416860.1 1509914 R 273036 CDS YP_416861.1 82751120 3794377 complement(1510701..1511975) 1 NC_007622.1 branched-chain alpha-keto acid dehydrogenase E2 1511975 3794377 SAB1388c Staphylococcus aureus RF122 branched-chain alpha-keto acid dehydrogenase E2 YP_416861.1 1510701 R 273036 CDS YP_416862.1 82751121 3794378 complement(1511988..1512971) 1 NC_007622.1 2-oxoisovalerate dehydrogenase beta subunit 1512971 3794378 SAB1389c Staphylococcus aureus RF122 2-oxoisovalerate dehydrogenase beta subunit YP_416862.1 1511988 R 273036 CDS YP_416863.1 82751122 3795217 complement(1512971..1513963) 1 NC_007622.1 2-oxoisovalerate dehydrogenase alpha subunit 1513963 3795217 SAB1390c Staphylococcus aureus RF122 2-oxoisovalerate dehydrogenase alpha subunit YP_416863.1 1512971 R 273036 CDS YP_416864.1 82751123 3795218 complement(1513979..1515400) 1 NC_007622.1 dihydrolipoamide dehydrogenase 1515400 3795218 SAB1391c Staphylococcus aureus RF122 dihydrolipoamide dehydrogenase YP_416864.1 1513979 R 273036 CDS YP_416865.1 82751124 3795219 complement(1515551..1517230) 1 NC_007622.1 DNA repair protein 1517230 3795219 SAB1392c Staphylococcus aureus RF122 DNA repair protein YP_416865.1 1515551 R 273036 CDS YP_416866.1 82751125 3794946 complement(1517246..1517698) 1 NC_007622.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1517698 argR 3794946 argR Staphylococcus aureus RF122 arginine repressor YP_416866.1 1517246 R 273036 CDS YP_416867.1 82751126 3795220 complement(1518129..1519010) 1 NC_007622.1 geranyltranstransferase 1519010 3795220 SAB1394c Staphylococcus aureus RF122 geranyltranstransferase YP_416867.1 1518129 R 273036 CDS YP_416868.1 82751127 3795221 complement(1518988..1519218) 1 NC_007622.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1519218 3795221 SAB1395c Staphylococcus aureus RF122 exodeoxyribonuclease VII small subunit YP_416868.1 1518988 R 273036 CDS YP_416869.1 82751128 3795222 complement(1519211..1520548) 1 NC_007622.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1520548 xseA 3795222 xseA Staphylococcus aureus RF122 exodeoxyribonuclease VII large subunit YP_416869.1 1519211 R 273036 CDS YP_416870.1 82751129 3795223 complement(1520565..1520954) 1 NC_007622.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1520954 nusB 3795223 nusB Staphylococcus aureus RF122 transcription antitermination protein NusB YP_416870.1 1520565 R 273036 CDS YP_416871.1 82751130 3795224 complement(1521014..1521376) 1 NC_007622.1 hypothetical protein 1521376 3795224 SAB1398c Staphylococcus aureus RF122 hypothetical protein YP_416871.1 1521014 R 273036 CDS YP_416872.1 82751131 3794819 complement(1521391..1522746) 1 NC_007622.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1522746 accC 3794819 accC Staphylococcus aureus RF122 acetyl-CoA carboxylase biotin carboxylase subunit YP_416872.1 1521391 R 273036 CDS YP_416873.1 82751132 3794817 complement(1522746..1523210) 1 NC_007622.1 acetyl-CoA carboxylase biotin carboxyl carrier subunit 1523210 accB 3794817 accB Staphylococcus aureus RF122 acetyl-CoA carboxylase biotin carboxyl carrier subunit YP_416873.1 1522746 R 273036 CDS YP_416874.1 82751133 3793355 complement(1523684..1524241) 1 NC_007622.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1524241 efp 3793355 efp Staphylococcus aureus RF122 elongation factor P YP_416874.1 1523684 R 273036 CDS YP_416875.1 82751134 3795225 complement(1524267..1525328) 1 NC_007622.1 proline dipeptidase 1525328 3795225 SAB1402c Staphylococcus aureus RF122 proline dipeptidase YP_416875.1 1524267 R 273036 CDS YP_416876.1 82751135 3795226 1525433..1526014 1 NC_007622.1 hypothetical protein 1526014 3795226 SAB1403 Staphylococcus aureus RF122 hypothetical protein YP_416876.1 1525433 D 273036 CDS YP_416877.1 82751136 3795227 1526028..1526246 1 NC_007622.1 hypothetical protein 1526246 3795227 SAB1404 Staphylococcus aureus RF122 hypothetical protein YP_416877.1 1526028 D 273036 CDS YP_416878.1 82751137 3795228 complement(1526310..1527140) 1 NC_007622.1 lipoate-protein ligase A 1527140 3795228 SAB1405c Staphylococcus aureus RF122 lipoate-protein ligase A YP_416878.1 1526310 R 273036 CDS YP_416879.1 82751138 3795229 1527298..1527684 1 NC_007622.1 hypothetical protein 1527684 3795229 SAB1406 Staphylococcus aureus RF122 hypothetical protein YP_416879.1 1527298 D 273036 CDS YP_416880.1 82751139 3795230 complement(1528048..1529520) 1 NC_007622.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1529520 3795230 SAB1407c Staphylococcus aureus RF122 glycine dehydrogenase subunit 2 YP_416880.1 1528048 R 273036 CDS YP_416881.1 82751140 3795231 complement(1529513..1530868) 1 NC_007622.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 1530868 3795231 SAB1408c Staphylococcus aureus RF122 glycine dehydrogenase subunit 1 YP_416881.1 1529513 R 273036 CDS YP_416882.1 82751141 3794357 complement(1530879..1531970) 1 NC_007622.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1531970 gcvT 3794357 gcvT Staphylococcus aureus RF122 glycine cleavage system aminomethyltransferase T YP_416882.1 1530879 R 273036 CDS YP_416883.1 82751142 3795232 complement(1532129..1532653) 1 NC_007622.1 hypothetical protein 1532653 3795232 SAB1410c Staphylococcus aureus RF122 hypothetical protein YP_416883.1 1532129 R 273036 CDS YP_416884.1 82751143 3795233 complement(1532886..1533353) 1 NC_007622.1 hypothetical protein 1533353 3795233 SAB1411c Staphylococcus aureus RF122 hypothetical protein YP_416884.1 1532886 R 273036 CDS YP_416885.1 82751144 3795234 complement(1533301..1533600) 1 NC_007622.1 hypothetical protein 1533600 3795234 SAB1412c Staphylococcus aureus RF122 hypothetical protein YP_416885.1 1533301 R 273036 CDS YP_416886.1 82751145 3795235 complement(1533587..1534033) 1 NC_007622.1 hypothetical protein 1534033 3795235 SAB1413c Staphylococcus aureus RF122 hypothetical protein YP_416886.1 1533587 R 273036 CDS YP_416887.1 82751146 3795236 complement(1534011..1534322) 1 NC_007622.1 exogenous DNA-binding protein 1534322 3795236 SAB1414c Staphylococcus aureus RF122 exogenous DNA-binding protein YP_416887.1 1534011 R 273036 CDS YP_416888.1 82751147 3792631 complement(1535378..1536352) 1 NC_007622.1 late competence protein 1536352 3792631 SAB1416c Staphylococcus aureus RF122 late competence protein YP_416888.1 1535378 R 273036 CDS YP_416889.1 82751148 3792632 complement(1536404..1537027) 1 NC_007622.1 metallo-beta-lactamase superfamily protein 1537027 3792632 SAB1417c Staphylococcus aureus RF122 metallo-beta-lactamase superfamily protein YP_416889.1 1536404 R 273036 CDS YP_416890.1 82751149 3792633 complement(1537024..1537353) 1 NC_007622.1 hypothetical protein 1537353 3792633 SAB1418c Staphylococcus aureus RF122 hypothetical protein YP_416890.1 1537024 R 273036 CDS YP_416891.1 82751150 3793645 complement(1537353..1538339) 1 NC_007622.1 glucokinase 1538339 glkA 3793645 glkA Staphylococcus aureus RF122 glucokinase YP_416891.1 1537353 R 273036 CDS YP_416892.1 82751151 3792634 complement(1538336..1538539) 1 NC_007622.1 hypothetical protein 1538539 3792634 SAB1420c Staphylococcus aureus RF122 hypothetical protein YP_416892.1 1538336 R 273036 CDS YP_416893.1 82751152 3792635 complement(1538520..1539983) 1 NC_007622.1 hypothetical protein 1539983 3792635 SAB1421c Staphylococcus aureus RF122 hypothetical protein YP_416893.1 1538520 R 273036 CDS YP_416894.1 82751153 3792636 complement(1539995..1540534) 1 NC_007622.1 hypothetical protein 1540534 3792636 SAB1422c Staphylococcus aureus RF122 hypothetical protein YP_416894.1 1539995 R 273036 CDS YP_416895.1 82751154 3792924 complement(1540743..1540892) 1 NC_007622.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1540892 rpmG 3792924 rpmG Staphylococcus aureus RF122 50S ribosomal protein L33 YP_416895.1 1540743 R 273036 CDS YP_416896.1 82751155 3794120 complement(1541005..1543080) 1 NC_007622.1 penicillin-binding protein 3 1543080 pbpF 3794120 pbpF Staphylococcus aureus RF122 penicillin-binding protein 3 YP_416896.1 1541005 R 273036 CDS YP_416897.1 82751156 3793001 complement(1543201..1543800) 1 NC_007622.1 superoxide dismutase 1543800 sodA 3793001 sodA Staphylococcus aureus RF122 superoxide dismutase YP_416897.1 1543201 R 273036 CDS YP_416898.1 82751157 3792725 complement(1544076..1544486) 1 NC_007622.1 zinc-specific metalloregulator 1544486 zur 3792725 zur Staphylococcus aureus RF122 zinc-specific metalloregulator YP_416898.1 1544076 R 273036 CDS YP_416899.1 82751158 3793459 complement(1544473..1545345) 1 NC_007622.1 ABC transporter protein 1545345 mreB 3793459 mreB Staphylococcus aureus RF122 ABC transporter protein YP_416899.1 1544473 R 273036 CDS YP_416900.1 82751159 3793458 complement(1545378..1546163) 1 NC_007622.1 ABC transporter protein 1546163 mreA 3793458 mreA Staphylococcus aureus RF122 ABC transporter protein YP_416900.1 1545378 R 273036 CDS YP_416901.1 82751160 3792637 complement(1546289..1547179) 1 NC_007622.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1547179 3792637 SAB1429c Staphylococcus aureus RF122 endonuclease IV YP_416901.1 1546289 R 273036 CDS YP_416902.1 82751161 3792638 complement(1547189..1548535) 1 NC_007622.1 ATP-dependent RNA helicase 1548535 3792638 SAB1430c Staphylococcus aureus RF122 ATP-dependent RNA helicase YP_416902.1 1547189 R 273036 CDS YP_416903.1 82751162 3792639 complement(1548649..1549749) 1 NC_007622.1 hypothetical protein 1549749 3792639 SAB1431c Staphylococcus aureus RF122 hypothetical protein YP_416903.1 1548649 R 273036 CDS YP_416904.1 82751163 3792640 complement(1549752..1550429) 1 NC_007622.1 hypothetical protein 1550429 3792640 SAB1432c Staphylococcus aureus RF122 hypothetical protein YP_416904.1 1549752 R 273036 CDS YP_416905.1 82751164 3792930 complement(1550560..1551666) 1 NC_007622.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 1551666 rpoD 3792930 rpoD Staphylococcus aureus RF122 RNA polymerase sigma factor RpoD YP_416905.1 1550560 R 273036 CDS YP_416906.1 82751165 3794493 complement(1551890..1553689) 1 NC_007622.1 DNA primase 1553689 dnaG 3794493 dnaG Staphylococcus aureus RF122 DNA primase YP_416906.1 1551890 R 273036 CDS YP_416907.1 82751166 3792641 complement(1553750..1554568) 1 NC_007622.1 hypothetical protein 1554568 3792641 SAB1435c Staphylococcus aureus RF122 hypothetical protein YP_416907.1 1553750 R 273036 CDS YP_416908.1 82751167 3792642 complement(1554579..1555118) 1 NC_007622.1 hypothetical protein 1555118 3792642 SAB1436c Staphylococcus aureus RF122 hypothetical protein YP_416908.1 1554579 R 273036 CDS YP_416909.1 82751168 3794223 1555537..1556928 1 NC_007622.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 1556928 glyS 3794223 glyS Staphylococcus aureus RF122 glycyl-tRNA synthetase YP_416909.1 1555537 D 273036 CDS YP_416910.1 82751169 3792643 complement(1557079..1557831) 1 NC_007622.1 recombination protein 1557831 3792643 SAB1438c Staphylococcus aureus RF122 recombination protein YP_416910.1 1557079 R 273036 CDS YP_416911.1 82751170 3793357 complement(1557853..1558752) 1 NC_007622.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1558752 era 3793357 era Staphylococcus aureus RF122 GTP-binding protein Era YP_416911.1 1557853 R 273036 CDS YP_416912.1 82751171 3794412 complement(1558753..1559157) 1 NC_007622.1 cytidine deaminase 1559157 cdd 3794412 cdd Staphylococcus aureus RF122 cytidine deaminase YP_416912.1 1558753 R 273036 CDS YP_416913.1 82751172 3792644 complement(1559168..1559512) 1 NC_007622.1 diacylglycerol kinase 1559512 3792644 SAB1441c Staphylococcus aureus RF122 diacylglycerol kinase YP_416913.1 1559168 R 273036 CDS YP_416914.1 82751173 3792645 complement(1559515..1559982) 1 NC_007622.1 hypothetical protein 1559982 3792645 SAB1442c Staphylococcus aureus RF122 hypothetical protein YP_416914.1 1559515 R 273036 CDS YP_416915.1 82751174 3792646 complement(1559983..1560930) 1 NC_007622.1 phosphate starvation-induced protein 1560930 3792646 SAB1443c Staphylococcus aureus RF122 phosphate starvation-induced protein YP_416915.1 1559983 R 273036 CDS YP_416916.1 82751175 3792647 complement(1561230..1561928) 1 NC_007622.1 hypothetical protein 1561928 3792647 SAB1444c Staphylococcus aureus RF122 hypothetical protein YP_416916.1 1561230 R 273036 CDS YP_416917.1 82751176 3792648 complement(1561945..1562934) 1 NC_007622.1 hypothetical protein 1562934 3792648 SAB1445c Staphylococcus aureus RF122 hypothetical protein YP_416917.1 1561945 R 273036 CDS YP_416918.1 82751177 3793835 complement(1562952..1563659) 1 NC_007622.1 hypothetical protein 1563659 3793835 SAB1446c Staphylococcus aureus RF122 hypothetical protein YP_416918.1 1562952 R 273036 CDS YP_416919.1 82751178 3794997 complement(1563879..1564055) 1 NC_007622.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1564055 rpsU 3794997 rpsU Staphylococcus aureus RF122 30S ribosomal protein S21 YP_416919.1 1563879 R 273036 CDS YP_416920.1 82751179 3793836 complement(1564348..1565694) 1 NC_007622.1 hypothetical protein 1565694 3793836 SAB1448c Staphylococcus aureus RF122 hypothetical protein YP_416920.1 1564348 R 273036 CDS YP_416921.1 82751180 3793837 complement(1565701..1566453) 1 NC_007622.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1566453 3793837 SAB1449c Staphylococcus aureus RF122 16S ribosomal RNA methyltransferase RsmE YP_416921.1 1565701 R 273036 CDS YP_416922.1 82751181 3793838 complement(1566455..1567393) 1 NC_007622.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 1567393 prmA 3793838 prmA Staphylococcus aureus RF122 ribosomal protein L11 methyltransferase YP_416922.1 1566455 R 273036 CDS YP_416923.1 82751182 3794495 complement(1567397..1568536) 1 NC_007622.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1568536 dnaJ 3794495 dnaJ Staphylococcus aureus RF122 chaperone protein DnaJ YP_416923.1 1567397 R 273036 CDS YP_416924.1 82751183 3793348 complement(1568672..1570504) 1 NC_007622.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1570504 dnaK 3793348 dnaK Staphylococcus aureus RF122 molecular chaperone DnaK YP_416924.1 1568672 R 273036 CDS YP_416925.1 82751184 3794235 complement(1570573..1571199) 1 NC_007622.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1571199 grpE 3794235 grpE Staphylococcus aureus RF122 heat shock protein GrpE YP_416925.1 1570573 R 273036 CDS YP_416926.1 82751185 3794088 complement(1571231..1572208) 1 NC_007622.1 heat-inducible transcription repressor 1572208 hrcA 3794088 hrcA Staphylococcus aureus RF122 heat-inducible transcription repressor YP_416926.1 1571231 R 273036 CDS YP_416927.1 82751186 3793839 complement(1572308..1573432) 1 NC_007622.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1573432 3793839 SAB1455c Staphylococcus aureus RF122 coproporphyrinogen III oxidase YP_416927.1 1572308 R 273036 CDS YP_416928.1 82751187 3793840 complement(1573604..1573855) 1 NC_007622.1 hypothetical protein 1573855 3793840 SAB1456c Staphylococcus aureus RF122 hypothetical protein YP_416928.1 1573604 R 273036 CDS YP_416929.1 82751188 3794803 complement(1573993..1575816) 1 NC_007622.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1575816 lepA 3794803 lepA Staphylococcus aureus RF122 GTP-binding protein LepA YP_416929.1 1573993 R 273036 CDS YP_416930.1 82751189 3794996 1576162..1576413 1 NC_007622.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1576413 rpsT 3794996 rpsT Staphylococcus aureus RF122 30S ribosomal protein S20 YP_416930.1 1576162 D 273036 CDS YP_416931.1 82751190 3793841 complement(1576458..1577432) 1 NC_007622.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1577432 holA 3793841 holA Staphylococcus aureus RF122 DNA polymerase III subunit delta YP_416931.1 1576458 R 273036 CDS YP_416932.1 82751191 3793843 complement(1579697..1580158) 1 NC_007622.1 late competence deaminase protein 1580158 3793843 SAB1461c Staphylococcus aureus RF122 late competence deaminase protein YP_416932.1 1579697 R 273036 CDS YP_416933.1 82751192 3793844 complement(1580250..1580927) 1 NC_007622.1 competence-related membrane protein 1580927 3793844 SAB1462c Staphylococcus aureus RF122 competence-related membrane protein YP_416933.1 1580250 R 273036 CDS YP_416934.1 82751193 3793845 complement(1580976..1581692) 1 NC_007622.1 hypothetical protein 1581692 3793845 SAB1463c Staphylococcus aureus RF122 hypothetical protein YP_416934.1 1580976 R 273036 CDS YP_416935.1 82751194 3793846 complement(1581695..1582048) 1 NC_007622.1 hypothetical protein 1582048 3793846 SAB1464c Staphylococcus aureus RF122 hypothetical protein YP_416935.1 1581695 R 273036 CDS YP_416936.1 82751195 3793847 complement(1582049..1582633) 1 NC_007622.1 hypothetical protein 1582633 3793847 SAB1465c Staphylococcus aureus RF122 hypothetical protein YP_416936.1 1582049 R 273036 CDS YP_416937.1 82751196 3793848 complement(1582623..1583192) 1 NC_007622.1 nicotinate-nucleotide adenylyltransferase 1583192 3793848 SAB1466c Staphylococcus aureus RF122 nicotinate-nucleotide adenylyltransferase YP_416937.1 1582623 R 273036 CDS YP_416938.1 82751197 3793849 complement(1583195..1583485) 1 NC_007622.1 hypothetical protein 1583485 3793849 SAB1467c Staphylococcus aureus RF122 hypothetical protein YP_416938.1 1583195 R 273036 CDS YP_416939.1 82751198 3794954 complement(1583489..1584295) 1 NC_007622.1 shikimate 5-dehydrogenase 1584295 aroE 3794954 aroE Staphylococcus aureus RF122 shikimate 5-dehydrogenase YP_416939.1 1583489 R 273036 CDS YP_416940.1 82751199 3793850 complement(1584309..1585409) 1 NC_007622.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH 1585409 3793850 SAB1469c Staphylococcus aureus RF122 GTP-binding protein YqeH YP_416940.1 1584309 R 273036 CDS YP_416941.1 82751200 3793851 complement(1585410..1585937) 1 NC_007622.1 hypothetical protein 1585937 3793851 SAB1470c Staphylococcus aureus RF122 hypothetical protein YP_416941.1 1585410 R 273036 CDS YP_416942.1 82751201 3793852 complement(1585957..1586643) 1 NC_007622.1 hypothetical protein 1586643 3793852 SAB1471c Staphylococcus aureus RF122 hypothetical protein YP_416942.1 1585957 R 273036 CDS YP_416943.1 82751202 3793853 1586955..1587224 1 NC_007622.1 hypothetical protein 1587224 3793853 SAB1472 Staphylococcus aureus RF122 hypothetical protein YP_416943.1 1586955 D 273036 CDS YP_416944.1 82751203 3794964 complement(1588596..1589816) 1 NC_007622.1 hypothetical protein 1589816 3794964 SAB1474c Staphylococcus aureus RF122 hypothetical protein YP_416944.1 1588596 R 273036 CDS YP_416945.1 82751204 3794965 complement(1590107..1591336) 1 NC_007622.1 hypothetical protein 1591336 3794965 SAB1475c Staphylococcus aureus RF122 hypothetical protein YP_416945.1 1590107 R 273036 CDS YP_416946.1 82751205 3794966 complement(1591348..1592100) 1 NC_007622.1 LamB/YcsF family protein 1592100 3794966 SAB1476c Staphylococcus aureus RF122 LamB/YcsF family protein YP_416946.1 1591348 R 273036 CDS YP_416947.1 82751206 3794820 complement(1592100..1593461) 1 NC_007622.1 acetyl-CoA biotin carboxylase 1593461 accC 3794820 accC Staphylococcus aureus RF122 acetyl-CoA biotin carboxylase YP_416947.1 1592100 R 273036 CDS YP_416948.1 82751207 3794818 complement(1593475..1593924) 1 NC_007622.1 biotin carboxyl carrier protein of acetyl-CoA carboxylase 1593924 accB 3794818 accB Staphylococcus aureus RF122 biotin carboxyl carrier protein of acetyl-CoA carboxylase YP_416948.1 1593475 R 273036 CDS YP_416949.1 82751208 3794967 complement(1593926..1594936) 1 NC_007622.1 hypothetical protein 1594936 3794967 SAB1479c Staphylococcus aureus RF122 hypothetical protein YP_416949.1 1593926 R 273036 CDS YP_416950.1 82751209 3794968 complement(1594926..1595684) 1 NC_007622.1 hypothetical protein 1595684 3794968 SAB1480c Staphylococcus aureus RF122 hypothetical protein YP_416950.1 1594926 R 273036 CDS YP_416951.1 82751210 3794230 complement(1595986..1596462) 1 NC_007622.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1596462 greA 3794230 greA Staphylococcus aureus RF122 transcription elongation factor GreA YP_416951.1 1595986 R 273036 CDS YP_416952.1 82751211 3795133 complement(1596490..1597113) 1 NC_007622.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1597113 udk 3795133 udk Staphylococcus aureus RF122 uridine kinase YP_416952.1 1596490 R 273036 CDS YP_416953.1 82751212 3794969 complement(1597113..1598381) 1 NC_007622.1 proteinase 1598381 3794969 SAB1483c Staphylococcus aureus RF122 proteinase YP_416953.1 1597113 R 273036 CDS YP_416954.1 82751213 3794970 complement(1598393..1599322) 1 NC_007622.1 proteinase 1599322 3794970 SAB1484c Staphylococcus aureus RF122 proteinase YP_416954.1 1598393 R 273036 CDS YP_416955.1 82751214 3794971 complement(1599319..1599957) 1 NC_007622.1 hypothetical protein 1599957 3794971 SAB1485c Staphylococcus aureus RF122 hypothetical protein YP_416955.1 1599319 R 273036 CDS YP_416956.1 82751215 3794972 complement(1600242..1600550) 1 NC_007622.1 hypothetical protein 1600550 3794972 SAB1486c Staphylococcus aureus RF122 hypothetical protein YP_416956.1 1600242 R 273036 CDS YP_416957.1 82751216 3794973 complement(1600565..1600993) 1 NC_007622.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1600993 3794973 SAB1487c Staphylococcus aureus RF122 Holliday junction resolvase-like protein YP_416957.1 1600565 R 273036 CDS YP_416958.1 82751217 3794974 complement(1600997..1601257) 1 NC_007622.1 hypothetical protein 1601257 3794974 SAB1488c Staphylococcus aureus RF122 hypothetical protein YP_416958.1 1600997 R 273036 CDS YP_416959.1 82751218 3794894 complement(1601320..1603950) 1 NC_007622.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1603950 alaS 3794894 alaS Staphylococcus aureus RF122 alanyl-tRNA synthetase YP_416959.1 1601320 R 273036 CDS YP_416960.1 82751219 3794975 complement(1604293..1606770) 1 NC_007622.1 deoxyribonuclease 1606770 3794975 SAB1490c Staphylococcus aureus RF122 deoxyribonuclease YP_416960.1 1604293 R 273036 CDS YP_416961.1 82751220 3794976 complement(1606772..1607440) 1 NC_007622.1 hypothetical protein 1607440 3794976 SAB1491c Staphylococcus aureus RF122 hypothetical protein YP_416961.1 1606772 R 273036 CDS YP_416962.1 82751221 3794336 complement(1607906..1609024) 1 NC_007622.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1609024 mnmA 3794336 mnmA Staphylococcus aureus RF122 tRNA-specific 2-thiouridylase MnmA YP_416962.1 1607906 R 273036 CDS YP_416963.1 82751222 3794977 complement(1609025..1610167) 1 NC_007622.1 similar to B. subtilis yrvO protein; iron-sulfur cofactor synthesis protein 1610167 3794977 SAB1493c Staphylococcus aureus RF122 iron-sulfur cofactor synthesis protein YP_416963.1 1609025 R 273036 CDS YP_416964.1 82751223 3794978 1610479..1611492 1 NC_007622.1 oxygenase 1611492 3794978 SAB1494 Staphylococcus aureus RF122 oxygenase YP_416964.1 1610479 D 273036 CDS YP_416965.1 82751224 3794979 1611680..1611895 1 NC_007622.1 hypothetical protein 1611895 3794979 SAB1495 Staphylococcus aureus RF122 hypothetical protein YP_416965.1 1611680 D 273036 CDS YP_416966.1 82751225 3794980 complement(1612157..1612579) 1 NC_007622.1 hypothetical protein 1612579 3794980 SAB1496c Staphylococcus aureus RF122 hypothetical protein YP_416966.1 1612157 R 273036 CDS YP_416967.1 82751226 3794981 1612664..1613938 1 NC_007622.1 recombination factor protein RarA 1613938 3794981 SAB1497 Staphylococcus aureus RF122 recombination factor protein RarA YP_416967.1 1612664 D 273036 CDS YP_416968.1 82751227 3794982 complement(1614099..1614872) 1 NC_007622.1 hypothetical protein 1614872 3794982 SAB1498c Staphylococcus aureus RF122 hypothetical protein YP_416968.1 1614099 R 273036 CDS YP_416969.1 82751228 3794960 complement(1615333..1617099) 1 NC_007622.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1617099 aspS 3794960 aspS Staphylococcus aureus RF122 aspartyl-tRNA synthetase YP_416969.1 1615333 R 273036 CDS YP_416970.1 82751229 3794920 complement(1617115..1618377) 1 NC_007622.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1618377 hisS 3794920 hisS Staphylococcus aureus RF122 histidyl-tRNA synthetase YP_416970.1 1617115 R 273036 CDS YP_416971.1 82751230 3794653 complement(1618838..1619713) 1 NC_007622.1 N-acetylmuramoyl-L-alanine amidase 1619713 3794653 SAB1501c Staphylococcus aureus RF122 N-acetylmuramoyl-L-alanine amidase YP_416971.1 1618838 R 273036 CDS YP_416972.1 82751231 3793353 complement(1619710..1620162) 1 NC_007622.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1620162 dtd 3793353 dtd Staphylococcus aureus RF122 D-tyrosyl-tRNA(Tyr) deacylase YP_416972.1 1619710 R 273036 CDS YP_416973.1 82751232 3794277 complement(1620174..1622384) 1 NC_007622.1 GTP pyrophosphokinase 1622384 relA 3794277 relA Staphylococcus aureus RF122 GTP pyrophosphokinase YP_416973.1 1620174 R 273036 CDS YP_416974.1 82751233 3794901 complement(1622791..1623309) 1 NC_007622.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1623309 apt 3794901 apt Staphylococcus aureus RF122 adenine phosphoribosyltransferase YP_416974.1 1622791 R 273036 CDS YP_416975.1 82751234 3794654 complement(1623331..1625604) 1 NC_007622.1 single-strand DNA-specific exonuclease 1625604 3794654 SAB1505c Staphylococcus aureus RF122 single-strand DNA-specific exonuclease YP_416975.1 1623331 R 273036 CDS YP_416976.1 82751235 3794614 complement(1625807..1628086) 1 NC_007622.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 1628086 secF 3794614 secF Staphylococcus aureus RF122 bifunctional preprotein translocase subunit SecD/SecF YP_416976.1 1625807 R 273036 CDS YP_416977.1 82751236 3794655 complement(1628361..1628621) 1 NC_007622.1 hypothetical protein 1628621 3794655 SAB1507c Staphylococcus aureus RF122 hypothetical protein YP_416977.1 1628361 R 273036 CDS YP_416978.1 82751237 3794321 complement(1628640..1629779) 1 NC_007622.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1629779 tgt 3794321 tgt Staphylococcus aureus RF122 queuine tRNA-ribosyltransferase YP_416978.1 1628640 R 273036 CDS YP_416979.1 82751238 3794268 complement(1629802..1630866) 1 NC_007622.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1630866 queA 3794268 queA Staphylococcus aureus RF122 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_416979.1 1629802 R 273036 CDS YP_416980.1 82751239 3795002 complement(1630829..1631833) 1 NC_007622.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1631833 ruvB 3795002 ruvB Staphylococcus aureus RF122 Holliday junction DNA helicase RuvB YP_416980.1 1630829 R 273036 CDS YP_416981.1 82751240 3795001 complement(1631865..1632467) 1 NC_007622.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1632467 ruvA 3795001 ruvA Staphylococcus aureus RF122 Holliday junction DNA helicase RuvA YP_416981.1 1631865 R 273036 CDS YP_416982.1 82751241 3794656 complement(1632481..1632939) 1 NC_007622.1 hypothetical protein 1632939 3794656 SAB1512c Staphylococcus aureus RF122 hypothetical protein YP_416982.1 1632481 R 273036 CDS YP_416983.1 82751242 3794657 complement(1632949..1634241) 1 NC_007622.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1634241 obgE 3794657 obgE Staphylococcus aureus RF122 GTPase ObgE YP_416983.1 1632949 R 273036 CDS YP_416984.1 82751243 3795098 complement(1634464..1634748) 1 NC_007622.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1634748 rpmA 3795098 rpmA Staphylococcus aureus RF122 50S ribosomal protein L27 YP_416984.1 1634464 R 273036 CDS YP_416985.1 82751244 3794658 complement(1634760..1635080) 1 NC_007622.1 hypothetical protein 1635080 3794658 SAB1515c Staphylococcus aureus RF122 hypothetical protein YP_416985.1 1634760 R 273036 CDS YP_416986.1 82751245 3795094 complement(1635086..1635394) 1 NC_007622.1 50S ribosomal protein L21 1635394 rplU 3795094 rplU Staphylococcus aureus RF122 50S ribosomal protein L21 YP_416986.1 1635086 R 273036 CDS YP_416987.1 82751246 3794659 complement(1635561..1636091) 1 NC_007622.1 hypothetical protein 1636091 3794659 SAB1517c Staphylococcus aureus RF122 hypothetical protein YP_416987.1 1635561 R 273036 CDS YP_416988.1 82751247 3794660 complement(1636091..1636933) 1 NC_007622.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1636933 3794660 SAB1518c Staphylococcus aureus RF122 rod shape-determining protein MreC YP_416988.1 1636091 R 273036 CDS YP_416989.1 82751248 3794661 complement(1637324..1637797) 1 NC_007622.1 hypothetical protein 1637797 3794661 SAB1519c Staphylococcus aureus RF122 hypothetical protein YP_416989.1 1637324 R 273036 CDS YP_416990.1 82751249 3794662 complement(1638271..1638555) 1 NC_007622.1 hypothetical protein 1638555 3794662 SAB1520c Staphylococcus aureus RF122 hypothetical protein YP_416990.1 1638271 R 273036 CDS YP_416991.1 82751250 3794270 complement(1638623..1639309) 1 NC_007622.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1639309 radC 3794270 radC Staphylococcus aureus RF122 DNA repair protein RadC YP_416991.1 1638623 R 273036 CDS YP_416992.1 82751251 3794663 complement(1639412..1640014) 1 NC_007622.1 leader peptidase protein 1640014 3794663 SAB1522c Staphylococcus aureus RF122 leader peptidase protein YP_416992.1 1639412 R 273036 CDS YP_416993.1 82751252 3794748 complement(1640282..1641553) 1 NC_007622.1 folylpolyglutamate synthase 1641553 folC 3794748 folC Staphylococcus aureus RF122 folylpolyglutamate synthase YP_416993.1 1640282 R 273036 CDS YP_416994.1 82751253 3794172 complement(1641566..1644196) 1 NC_007622.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1644196 valS 3794172 valS Staphylococcus aureus RF122 valyl-tRNA synthetase YP_416994.1 1641566 R 273036 CDS YP_416995.1 82751254 3793316 1644600..1645160 1 NC_007622.1 DNA-3-methyladenine glycosidase 1645160 tag 3793316 tag Staphylococcus aureus RF122 DNA-3-methyladenine glycosidase YP_416995.1 1644600 D 273036 CDS YP_416996.1 82751255 3794664 complement(1645383..1646456) 1 NC_007622.1 hypothetical protein 1646456 3794664 SAB1526c Staphylococcus aureus RF122 hypothetical protein YP_416996.1 1645383 R 273036 CDS YP_416997.1 82751256 3794911 complement(1646651..1647937) 1 NC_007622.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1647937 hemL 3794911 hemL Staphylococcus aureus RF122 glutamate-1-semialdehyde aminotransferase YP_416997.1 1646651 R 273036 CDS YP_416998.1 82751257 3794906 complement(1647985..1648959) 1 NC_007622.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1648959 hemB 3794906 hemB Staphylococcus aureus RF122 delta-aminolevulinic acid dehydratase YP_416998.1 1647985 R 273036 CDS YP_416999.1 82751258 3794908 complement(1648962..1649630) 1 NC_007622.1 uroporphyrinogen III synthase 1649630 hemD 3794908 hemD Staphylococcus aureus RF122 uroporphyrinogen III synthase YP_416999.1 1648962 R 273036 CDS YP_417000.1 82751259 3794907 complement(1649652..1650578) 1 NC_007622.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1650578 hemC 3794907 hemC Staphylococcus aureus RF122 porphobilinogen deaminase YP_417000.1 1649652 R 273036 CDS YP_417001.1 82751260 3794665 complement(1650620..1651435) 1 NC_007622.1 membrane uroporphyrinogen III methylase 1651435 3794665 SAB1531c Staphylococcus aureus RF122 membrane uroporphyrinogen III methylase YP_417001.1 1650620 R 273036 CDS YP_417002.1 82751261 3794241 complement(1651457..1652803) 1 NC_007622.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1652803 hemA 3794241 hemA Staphylococcus aureus RF122 glutamyl-tRNA reductase YP_417002.1 1651457 R 273036 CDS YP_417003.1 82751262 3794666 complement(1653020..1653610) 1 NC_007622.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1653610 engB 3794666 engB Staphylococcus aureus RF122 ribosome biogenesis GTP-binding protein YsxC YP_417003.1 1653020 R 273036 CDS YP_417004.1 82751263 3794836 complement(1653764..1655026) 1 NC_007622.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1655026 clpX 3794836 clpX Staphylococcus aureus RF122 ATP-dependent protease ATP-binding subunit ClpX YP_417004.1 1653764 R 273036 CDS YP_417005.1 82751264 3794330 complement(1655177..1656478) 1 NC_007622.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1656478 tig 3794330 tig Staphylococcus aureus RF122 trigger factor YP_417005.1 1655177 R 273036 CDS YP_417006.1 82751265 3794667 complement(1656641..1657570) 1 NC_007622.1 hypothetical protein 1657570 3794667 SAB1536c Staphylococcus aureus RF122 hypothetical protein YP_417006.1 1656641 R 273036 CDS YP_417007.1 82751266 3794668 complement(1657589..1658197) 1 NC_007622.1 hypothetical protein 1658197 3794668 SAB1537c Staphylococcus aureus RF122 hypothetical protein YP_417007.1 1657589 R 273036 CDS YP_417008.1 82751267 3795093 complement(1658339..1658695) 1 NC_007622.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1658695 rplT 3795093 rplT Staphylococcus aureus RF122 50S ribosomal protein L20 YP_417008.1 1658339 R 273036 CDS YP_417009.1 82751268 3792926 complement(1658742..1658942) 1 NC_007622.1 50S ribosomal protein L35 1658942 rpmI 3792926 rpmI Staphylococcus aureus RF122 50S ribosomal protein L35 YP_417009.1 1658742 R 273036 CDS YP_417010.1 82751269 3795264 complement(1658971..1659498) 1 NC_007622.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1659498 infC 3795264 infC Staphylococcus aureus RF122 translation initiation factor IF-3 YP_417010.1 1658971 R 273036 CDS YP_417011.1 82751270 3794763 complement(1659727..1661220) 1 NC_007622.1 lysine specific permease 1661220 lysP 3794763 lysP Staphylococcus aureus RF122 lysine specific permease YP_417011.1 1659727 R 273036 CDS YP_417012.1 82751271 3794328 complement(1661647..1663584) 1 NC_007622.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1663584 thrS 3794328 thrS Staphylococcus aureus RF122 threonyl-tRNA synthetase YP_417012.1 1661647 R 273036 CDS YP_417013.1 82751272 3794494 complement(1663995..1664915) 1 NC_007622.1 Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI 1664915 dnaI 3794494 dnaI Staphylococcus aureus RF122 primosomal protein DnaI YP_417013.1 1663995 R 273036 CDS YP_417014.1 82751273 3794489 complement(1664915..1666315) 1 NC_007622.1 chromosome replication initiation and membrane attachment protein 1666315 dnaB 3794489 dnaB Staphylococcus aureus RF122 chromosome replication initiation and membrane attachment protein YP_417014.1 1664915 R 273036 CDS YP_417015.1 82751274 3794669 complement(1666316..1666786) 1 NC_007622.1 NrdR family transcriptional regulator 1666786 nrdR 3794669 nrdR Staphylococcus aureus RF122 NrdR family transcriptional regulator YP_417015.1 1666316 R 273036 CDS YP_417016.1 82751275 3794350 complement(1666996..1668021) 1 NC_007622.1 glyceraldehyde 3-phosphate dehydrogenase 2 1668021 gap 3794350 gap Staphylococcus aureus RF122 glyceraldehyde 3-phosphate dehydrogenase 2 YP_417016.1 1666996 R 273036 CDS YP_417017.1 82751276 3794839 complement(1668191..1668814) 1 NC_007622.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1668814 coaE 3794839 coaE Staphylococcus aureus RF122 dephospho-CoA kinase YP_417017.1 1668191 R 273036 CDS YP_417018.1 82751277 3794670 complement(1668830..1669702) 1 NC_007622.1 formamidopyrimidine-DNA glycosylase 1669702 3794670 SAB1548c Staphylococcus aureus RF122 formamidopyrimidine-DNA glycosylase YP_417018.1 1668830 R 273036 CDS YP_417019.1 82751278 3794027 complement(1669718..1672348) 1 NC_007622.1 DNA polymerase I 1672348 polA 3794027 polA Staphylococcus aureus RF122 DNA polymerase I YP_417019.1 1669718 R 273036 CDS YP_417020.1 82751279 3794671 complement(1672642..1674129) 1 NC_007622.1 hypothetical protein 1674129 3794671 SAB1550c Staphylococcus aureus RF122 hypothetical protein YP_417020.1 1672642 R 273036 CDS YP_417021.1 82751280 3794473 complement(1674628..1676292) 1 NC_007622.1 alkaline phosphatase synthesis sensor protein 1676292 phoR 3794473 phoR Staphylococcus aureus RF122 alkaline phosphatase synthesis sensor protein YP_417021.1 1674628 R 273036 CDS YP_417022.1 82751281 3794472 complement(1676289..1676993) 1 NC_007622.1 alkaline phosphatase synthesis transcriptional regulatory protein 1676993 phoP 3794472 phoP Staphylococcus aureus RF122 alkaline phosphatase synthesis transcriptional regulatory protein YP_417022.1 1676289 R 273036 CDS YP_417023.1 82751282 3794416 complement(1677382..1678650) 1 NC_007622.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1678650 citC 3794416 citC Staphylococcus aureus RF122 isocitrate dehydrogenase YP_417023.1 1677382 R 273036 CDS YP_417024.1 82751283 3794418 complement(1678699..1679820) 1 NC_007622.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 1679820 citZ 3794418 citZ Staphylococcus aureus RF122 citrate synthase YP_417024.1 1678699 R 273036 CDS YP_417025.1 82751284 3795283 1680168..1681529 1 NC_007622.1 D-serine, D-alanine, glycine transporter 1681529 cycA 3795283 cycA Staphylococcus aureus RF122 D-serine, D-alanine, glycine transporter YP_417025.1 1680168 D 273036 CDS YP_417026.1 82751285 3794684 complement(1681879..1683636) 1 NC_007622.1 pyruvate kinase 1683636 pyk 3794684 pyk Staphylococcus aureus RF122 pyruvate kinase YP_417026.1 1681879 R 273036 CDS YP_417027.1 82751286 3794465 complement(1683658..1684626) 1 NC_007622.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 1684626 pfkA 3794465 pfkA Staphylococcus aureus RF122 6-phosphofructokinase YP_417027.1 1683658 R 273036 CDS YP_417028.1 82751287 3794816 complement(1684895..1685839) 1 NC_007622.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1685839 accA 3794816 accA Staphylococcus aureus RF122 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_417028.1 1684895 R 273036 CDS YP_417029.1 82751288 3794821 complement(1685839..1686696) 1 NC_007622.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1686696 accD 3794821 accD Staphylococcus aureus RF122 acetyl-CoA carboxylase subunit beta YP_417029.1 1685839 R 273036 CDS YP_417030.1 82751289 3794672 complement(1686891..1688120) 1 NC_007622.1 NAD-dependent malic enzyme 1688120 3794672 SAB1560c Staphylococcus aureus RF122 NAD-dependent malic enzyme YP_417030.1 1686891 R 273036 CDS YP_417031.1 82751290 3794492 complement(1688570..1691767) 1 NC_007622.1 DNA polymerase III alpha subunit 1691767 dnaE 3794492 dnaE Staphylococcus aureus RF122 DNA polymerase III alpha subunit YP_417031.1 1688570 R 273036 CDS YP_417032.1 82751291 3792901 complement(1691788..1692729) 1 NC_007622.1 hypothetical protein 1692729 3792901 SAB1562c Staphylococcus aureus RF122 hypothetical protein YP_417032.1 1691788 R 273036 CDS YP_417033.1 82751292 3792902 complement(1693068..1694366) 1 NC_007622.1 DNA-binding protein 1694366 3792902 SAB1563c Staphylococcus aureus RF122 DNA-binding protein YP_417033.1 1693068 R 273036 CDS YP_417034.1 82751293 3792903 1694571..1694984 1 NC_007622.1 hypothetical protein 1694984 3792903 SAB1564 Staphylococcus aureus RF122 hypothetical protein YP_417034.1 1694571 D 273036 CDS YP_417035.1 82751294 3792904 1695062..1695463 1 NC_007622.1 hypothetical protein 1695463 3792904 SAB1565 Staphylococcus aureus RF122 hypothetical protein YP_417035.1 1695062 D 273036 CDS YP_417036.1 82751295 3792905 complement(1695544..1696233) 1 NC_007622.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase 1696233 3792905 SAB1566c Staphylococcus aureus RF122 metal-dependent hydrolase YP_417036.1 1695544 R 273036 CDS YP_417037.1 82751296 3792906 1696387..1697463 1 NC_007622.1 Xaa-Pro dipeptidase-like protein 1697463 3792906 SAB1567 Staphylococcus aureus RF122 Xaa-Pro dipeptidase-like protein YP_417037.1 1696387 D 273036 CDS YP_417038.1 82751297 3794896 complement(1697779..1698897) 1 NC_007622.1 alanine dehydrogenase 1698897 ald 3794896 ald Staphylococcus aureus RF122 alanine dehydrogenase YP_417038.1 1697779 R 273036 CDS YP_417039.1 82751298 3792907 1699038..1699538 1 NC_007622.1 stress response protein 1699538 3792907 SAB1569 Staphylococcus aureus RF122 stress response protein YP_417039.1 1699038 D 273036 CDS YP_417040.1 82751299 3794822 complement(1699784..1700986) 1 NC_007622.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1700986 ackA 3794822 ackA Staphylococcus aureus RF122 acetate kinase YP_417040.1 1699784 R 273036 CDS YP_417041.1 82751300 3792908 complement(1701074..1702021) 1 NC_007622.1 hypothetical protein 1702021 3792908 SAB1571c Staphylococcus aureus RF122 hypothetical protein YP_417041.1 1701074 R 273036 CDS YP_417042.1 82751301 3792909 complement(1702144..1702638) 1 NC_007622.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 1702638 tpx 3792909 tpx Staphylococcus aureus RF122 thiol peroxidase YP_417042.1 1702144 R 273036 CDS YP_417043.1 82751302 3792910 complement(1702736..1703506) 1 NC_007622.1 hypothetical protein 1703506 3792910 SAB1573c Staphylococcus aureus RF122 hypothetical protein YP_417043.1 1702736 R 273036 CDS YP_417044.1 82751303 3792911 complement(1703550..1704773) 1 NC_007622.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1704773 3792911 SAB1574c Staphylococcus aureus RF122 thiamine biosynthesis protein ThiI YP_417044.1 1703550 R 273036 CDS YP_417045.1 82751304 3792912 complement(1704773..1705921) 1 NC_007622.1 aminotransferase 1705921 3792912 SAB1575c Staphylococcus aureus RF122 aminotransferase YP_417045.1 1704773 R 273036 CDS YP_417046.1 82751305 3792913 complement(1706247..1707941) 1 NC_007622.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA 1707941 3792913 SAB1576c Staphylococcus aureus RF122 septation ring formation regulator EzrA YP_417046.1 1706247 R 273036 CDS YP_417047.1 82751306 3792914 1708078..1708542 1 NC_007622.1 hypothetical protein 1708542 3792914 SAB1577 Staphylococcus aureus RF122 hypothetical protein YP_417047.1 1708078 D 273036 CDS YP_417048.1 82751307 3792935 1708786..1709388 1 NC_007622.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1709388 rpsD 3792935 rpsD Staphylococcus aureus RF122 30S ribosomal protein S4 YP_417048.1 1708786 D 273036 CDS YP_417049.1 82751308 3792915 complement(1709602..1710345) 1 NC_007622.1 hypothetical protein 1710345 3792915 SAB1579c Staphylococcus aureus RF122 hypothetical protein YP_417049.1 1709602 R 273036 CDS YP_417050.1 82751309 3792916 1710425..1710871 1 NC_007622.1 osmotic stress-related protein 1710871 3792916 SAB1580 Staphylococcus aureus RF122 osmotic stress-related protein YP_417050.1 1710425 D 273036 CDS YP_417051.1 82751310 3792917 1710986..1712146 1 NC_007622.1 soluble hydrogenase subunit 1712146 3792917 SAB1581 Staphylococcus aureus RF122 soluble hydrogenase subunit YP_417051.1 1710986 D 273036 CDS YP_417052.1 82751311 3792918 1712133..1713737 1 NC_007622.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1713737 3792918 SAB1582 Staphylococcus aureus RF122 D-3-phosphoglycerate dehydrogenase YP_417052.1 1712133 D 273036 CDS YP_417053.1 82751312 3792919 complement(1713887..1715017) 1 NC_007622.1 hypothetical protein 1715017 3792919 SAB1583c Staphylococcus aureus RF122 hypothetical protein YP_417053.1 1713887 R 273036 CDS YP_417054.1 82751313 3795022 complement(1715124..1716590) 1 NC_007622.1 PTS system N-acetylglucosamine-specific IIABC component 1716590 3795022 SAB1584c Staphylococcus aureus RF122 PTS system N-acetylglucosamine-specific IIABC component YP_417054.1 1715124 R 273036 CDS YP_417055.1 82751314 3795023 complement(1716718..1717335) 1 NC_007622.1 1-acylglycerol-3-phosphate O-acyltransferase 1717335 3795023 SAB1585c Staphylococcus aureus RF122 1-acylglycerol-3-phosphate O-acyltransferase YP_417055.1 1716718 R 273036 CDS YP_417056.1 82751315 3795024 1717507..1718781 1 NC_007622.1 serine protease 1718781 3795024 SAB1586 Staphylococcus aureus RF122 serine protease YP_417056.1 1717507 D 273036 CDS YP_417057.1 82751316 3795132 complement(1718875..1720137) 1 NC_007622.1 tyrosyl-tRNA synthetase 1720137 tyrS 3795132 tyrS Staphylococcus aureus RF122 tyrosyl-tRNA synthetase YP_417057.1 1718875 R 273036 CDS YP_417058.1 82751317 3795025 1720518..1721423 1 NC_007622.1 penicillin-binding protein 1A 1721423 3795025 SAB1588 Staphylococcus aureus RF122 penicillin-binding protein 1A YP_417058.1 1720518 D 273036 CDS YP_417059.1 82751318 3795026 complement(1721534..1722850) 1 NC_007622.1 transposase 1722850 3795026 SAB1589c Staphylococcus aureus RF122 transposase YP_417059.1 1721534 R 273036 CDS YP_417060.1 82751319 3795027 complement(1723135..1724988) 1 NC_007622.1 iron-regulated surface protein 1724988 3795027 SAB1590c Staphylococcus aureus RF122 iron-regulated surface protein YP_417060.1 1723135 R 273036 CDS YP_417061.1 82751320 3795028 complement(1725040..1725816) 1 NC_007622.1 surface-anchored iron-regulated surface protein 1725816 3795028 SAB1591c Staphylococcus aureus RF122 surface-anchored iron-regulated surface protein YP_417061.1 1725040 R 273036 CDS YP_417062.1 82751321 3794734 complement(1726149..1727816) 1 NC_007622.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 1727816 fhs 3794734 fhs Staphylococcus aureus RF122 formate--tetrahydrofolate ligase YP_417062.1 1726149 R 273036 CDS YP_417063.1 82751322 3794825 complement(1728256..1729962) 1 NC_007622.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1729962 acsA 3794825 acsA Staphylococcus aureus RF122 acetyl-CoA synthetase YP_417063.1 1728256 R 273036 CDS YP_417064.1 82751323 3794826 1730131..1730763 1 NC_007622.1 acetoin utilization protein 1730763 acuA 3794826 acuA Staphylococcus aureus RF122 acetoin utilization protein YP_417064.1 1730131 D 273036 CDS YP_417065.1 82751324 3794827 1730788..1731957 1 NC_007622.1 acetoin utilization protein 1731957 acuC 3794827 acuC Staphylococcus aureus RF122 acetoin utilization protein YP_417065.1 1730788 D 273036 CDS YP_417066.1 82751325 3794411 complement(1732055..1733044) 1 NC_007622.1 catabolite control protein A 1733044 ccpA 3794411 ccpA Staphylococcus aureus RF122 catabolite control protein A YP_417066.1 1732055 R 273036 CDS YP_417067.1 82751326 3794951 complement(1733582..1734673) 1 NC_007622.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase 1734673 aroA 3794951 aroA Staphylococcus aureus RF122 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase YP_417067.1 1733582 R 273036 CDS YP_417068.1 82751327 3795029 complement(1735368..1736318) 1 NC_007622.1 hypothetical protein 1736318 3795029 SAB1598c Staphylococcus aureus RF122 hypothetical protein YP_417068.1 1735368 R 273036 CDS YP_417069.1 82751328 3795030 complement(1736392..1736883) 1 NC_007622.1 hypothetical protein 1736883 3795030 SAB1599c Staphylococcus aureus RF122 hypothetical protein YP_417069.1 1736392 R 273036 CDS YP_417070.1 82751329 3794128 complement(1736957..1738195) 1 NC_007622.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1738195 murC 3794128 murC Staphylococcus aureus RF122 UDP-N-acetylmuramate--L-alanine ligase YP_417070.1 1736957 R 273036 CDS YP_417071.1 82751330 3795031 complement(1738295..1742125) 1 NC_007622.1 SpoIIIE family cell division protein 1742125 3795031 SAB1601c Staphylococcus aureus RF122 SpoIIIE family cell division protein YP_417071.1 1738295 R 273036 CDS YP_417072.1 82751331 3795032 complement(1742146..1742742) 1 NC_007622.1 phenylalanyl-tRNA synthetase beta subunit 1742742 3795032 SAB1602c Staphylococcus aureus RF122 phenylalanyl-tRNA synthetase beta subunit YP_417072.1 1742146 R 273036 CDS YP_417073.1 82751332 3795033 complement(1742771..1743628) 1 NC_007622.1 hypothetical protein 1743628 3795033 SAB1603c Staphylococcus aureus RF122 hypothetical protein YP_417073.1 1742771 R 273036 CDS YP_417074.1 82751333 3795034 complement(1743728..1744039) 1 NC_007622.1 thioredoxin family protein 1744039 3795034 SAB1604c Staphylococcus aureus RF122 thioredoxin family protein YP_417074.1 1743728 R 273036 CDS YP_417075.1 82751334 3795035 complement(1744104..1745180) 1 NC_007622.1 endo-1,4-beta-glucanase 1745180 3795035 SAB1605c Staphylococcus aureus RF122 endo-1,4-beta-glucanase YP_417075.1 1744104 R 273036 CDS YP_417076.1 82751335 3795036 1745267..1745578 1 NC_007622.1 hypothetical protein 1745578 3795036 SAB1606 Staphylococcus aureus RF122 hypothetical protein YP_417076.1 1745267 D 273036 CDS YP_417077.1 82751336 3795037 complement(1745703..1746545) 1 NC_007622.1 hypothetical protein 1746545 3795037 SAB1607c Staphylococcus aureus RF122 hypothetical protein YP_417077.1 1745703 R 273036 CDS YP_417078.1 82751337 3795038 complement(1747016..1747660) 1 NC_007622.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1747660 trmB 3795038 trmB Staphylococcus aureus RF122 tRNA (guanine-N(7)-)-methyltransferase YP_417078.1 1747016 R 273036 CDS YP_417079.1 82751338 3795039 complement(1747675..1748466) 1 NC_007622.1 hypothetical protein 1748466 3795039 SAB1609c Staphylococcus aureus RF122 hypothetical protein YP_417079.1 1747675 R 273036 CDS YP_417080.1 82751339 3795292 complement(1749013..1749861) 1 NC_007622.1 D-alanine aminotransferase 1749861 dat 3795292 dat Staphylococcus aureus RF122 D-alanine aminotransferase YP_417080.1 1749013 R 273036 CDS YP_417081.1 82751340 3795040 complement(1749865..1751274) 1 NC_007622.1 divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV 1751274 3795040 SAB1611c Staphylococcus aureus RF122 dipeptidase PepV YP_417081.1 1749865 R 273036 CDS YP_417082.1 82751341 3795041 complement(1751872..1752294) 1 NC_007622.1 hypothetical protein 1752294 3795041 SAB1612c Staphylococcus aureus RF122 hypothetical protein YP_417082.1 1751872 R 273036 CDS YP_417083.1 82751342 3793190 complement(1752311..1753006) 1 NC_007622.1 16S RNA pseudouridylate synthase 1753006 3793190 SAB1613c Staphylococcus aureus RF122 16S RNA pseudouridylate synthase YP_417083.1 1752311 R 273036 CDS YP_417084.1 82751343 3793191 complement(1753003..1754664) 1 NC_007622.1 polysaccharide transporter 1754664 3793191 SAB1614c Staphylococcus aureus RF122 polysaccharide transporter YP_417084.1 1753003 R 273036 CDS YP_417085.1 82751344 3793192 1755071..1756339 1 NC_007622.1 hypothetical protein 1756339 3793192 SAB1615 Staphylococcus aureus RF122 hypothetical protein YP_417085.1 1755071 D 273036 CDS YP_417086.1 82751345 3793194 complement(1762651..1762962) 1 NC_007622.1 hypothetical protein 1762962 3793194 SAB1617c Staphylococcus aureus RF122 hypothetical protein YP_417086.1 1762651 R 273036 CDS YP_417087.1 82751346 3794808 complement(1762984..1765398) 1 NC_007622.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1765398 leuS 3794808 leuS Staphylococcus aureus RF122 leucyl-tRNA synthetase YP_417087.1 1762984 R 273036 CDS YP_417088.1 82751347 3793195 complement(1765690..1766871) 1 NC_007622.1 multidrug resistance protein B 1766871 3793195 SAB1619c Staphylococcus aureus RF122 multidrug resistance protein B YP_417088.1 1765690 R 273036 CDS YP_417089.1 82751348 3793196 1766981..1767934 1 NC_007622.1 hypothetical protein 1767934 3793196 SAB1620 Staphylococcus aureus RF122 hypothetical protein YP_417089.1 1766981 D 273036 CDS YP_417090.1 82751349 3793197 1767931..1768494 1 NC_007622.1 hypothetical protein 1768494 3793197 SAB1621 Staphylococcus aureus RF122 hypothetical protein YP_417090.1 1767931 D 273036 CDS YP_417091.1 82751350 3793106 complement(1768614..1769114) 1 NC_007622.1 repressor of toxins transcriptional regulator 1769114 rot 3793106 rot Staphylococcus aureus RF122 repressor of toxins transcriptional regulator YP_417091.1 1768614 R 273036 CDS YP_417092.1 82751351 3793198 complement(1769587..1770414) 1 NC_007622.1 hypothetical protein 1770414 3793198 SAB1623c Staphylococcus aureus RF122 hypothetical protein YP_417092.1 1769587 R 273036 CDS YP_417093.1 82751352 3793199 1770648..1771649 1 NC_007622.1 proline oxidase 1771649 3793199 SAB1624 Staphylococcus aureus RF122 proline oxidase YP_417093.1 1770648 D 273036 CDS YP_417094.1 82751353 3793096 complement(1771771..1772235) 1 NC_007622.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1772235 ribH 3793096 ribH Staphylococcus aureus RF122 6,7-dimethyl-8-ribityllumazine synthase YP_417094.1 1771771 R 273036 CDS YP_417095.1 82751354 3794279 complement(1772248..1773429) 1 NC_007622.1 riboflavin biosynthesis protein 1773429 ribA 3794279 ribA Staphylococcus aureus RF122 riboflavin biosynthesis protein YP_417095.1 1772248 R 273036 CDS YP_417096.1 82751355 3793095 complement(1773440..1774072) 1 NC_007622.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1774072 ribE 3793095 ribE Staphylococcus aureus RF122 riboflavin synthase subunit alpha YP_417096.1 1773440 R 273036 CDS YP_417097.1 82751356 3793094 complement(1774079..1775122) 1 NC_007622.1 riboflavin specific deaminase 1775122 ribD 3793094 ribD Staphylococcus aureus RF122 riboflavin specific deaminase YP_417097.1 1774079 R 273036 CDS YP_417098.1 82751357 3793200 complement(1775603..1777105) 1 NC_007622.1 hypothetical protein 1777105 3793200 SAB1629c Staphylococcus aureus RF122 hypothetical protein YP_417098.1 1775603 R 273036 CDS YP_417099.1 82751358 3794956 1777627..1777941 1 NC_007622.1 arsenical resistance operon repressor 1777941 arsR 3794956 arsR Staphylococcus aureus RF122 arsenical resistance operon repressor YP_417099.1 1777627 D 273036 CDS YP_417100.1 82751359 3794955 1777941..1779233 1 NC_007622.1 arsenic efflux pump protein 1779233 arsB 3794955 arsB Staphylococcus aureus RF122 arsenic efflux pump protein YP_417100.1 1777941 D 273036 CDS YP_417101.1 82751360 3793201 1779251..1779646 1 NC_007622.1 catalyzes the reduction of arsenate to arsenite; also can dephosphorylate tyrosine phosphorylated proteins, aryl phosphates, and acyl phosphates; arsenate reductase 1779646 3793201 SAB1632 Staphylococcus aureus RF122 arsenate reductase YP_417101.1 1779251 D 273036 CDS YP_417102.1 82751361 3793202 complement(1780047..1780901) 1 NC_007622.1 hypothetical protein 1780901 3793202 SAB1633c Staphylococcus aureus RF122 hypothetical protein YP_417102.1 1780047 R 273036 CDS YP_417103.1 82751362 3793203 complement(1781177..1781401) 1 NC_007622.1 hypothetical protein 1781401 3793203 SAB1634c Staphylococcus aureus RF122 hypothetical protein YP_417103.1 1781177 R 273036 CDS YP_417104.1 82751363 3793204 1781585..1782070 1 NC_007622.1 DNA-binding protein 1782070 3793204 SAB1635 Staphylococcus aureus RF122 DNA-binding protein YP_417104.1 1781585 D 273036 CDS YP_417105.1 82751364 3793205 1782183..1782626 1 NC_007622.1 hypothetical protein 1782626 3793205 SAB1636 Staphylococcus aureus RF122 hypothetical protein YP_417105.1 1782183 D 273036 CDS YP_417106.1 82751365 3793206 complement(1782613..1783056) 1 NC_007622.1 hypothetical protein 1783056 3793206 SAB1637c Staphylococcus aureus RF122 hypothetical protein YP_417106.1 1782613 R 273036 CDS YP_417107.1 82751366 3793208 complement(1784413..1785126) 1 NC_007622.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 1785126 3793208 SAB1639c Staphylococcus aureus RF122 translaldolase YP_417107.1 1784413 R 273036 CDS YP_417108.1 82751367 3794594 1785384..1785686 1 NC_007622.1 hypothetical protein 1785686 3794594 SAB1640 Staphylococcus aureus RF122 hypothetical protein YP_417108.1 1785384 D 273036 CDS YP_417109.1 82751368 3794595 1785864..1786307 1 NC_007622.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1786307 3794595 SAB1641 Staphylococcus aureus RF122 camphor resistance protein CrcB YP_417109.1 1785864 D 273036 CDS YP_417110.1 82751369 3794596 1786304..1786657 1 NC_007622.1 hypothetical protein 1786657 3794596 SAB1642 Staphylococcus aureus RF122 hypothetical protein YP_417110.1 1786304 D 273036 CDS YP_417111.1 82751370 3794597 complement(1786906..1787739) 1 NC_007622.1 aldo-keto reductase family protein 1787739 3794597 SAB1643c Staphylococcus aureus RF122 aldo-keto reductase family protein YP_417111.1 1786906 R 273036 CDS YP_417112.1 82751371 3794598 complement(1787950..1788858) 1 NC_007622.1 hypothetical protein 1788858 3794598 SAB1644c Staphylococcus aureus RF122 hypothetical protein YP_417112.1 1787950 R 273036 CDS YP_417113.2 161777618 3794599 complement(1788983..1790176) 1 NC_007622.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1790176 3794599 SAB1645c Staphylococcus aureus RF122 S-adenosylmethionine synthetase YP_417113.2 1788983 R 273036 CDS YP_417114.1 82751373 3794122 1790547..1792139 1 NC_007622.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1792139 pckA 3794122 pckA Staphylococcus aureus RF122 phosphoenolpyruvate carboxykinase YP_417114.1 1790547 D 273036 CDS YP_417115.1 82751374 3794600 complement(1792436..1793206) 1 NC_007622.1 hypothetical protein 1793206 3794600 SAB1647c Staphylococcus aureus RF122 hypothetical protein YP_417115.1 1792436 R 273036 CDS YP_417116.1 82751375 3794601 complement(1793187..1793720) 1 NC_007622.1 hypothetical protein 1793720 3794601 SAB1648c Staphylococcus aureus RF122 hypothetical protein YP_417116.1 1793187 R 273036 CDS YP_417117.1 82751376 3794602 1793726..1793983 1 NC_007622.1 hypothetical protein 1793983 3794602 SAB1649 Staphylococcus aureus RF122 hypothetical protein YP_417117.1 1793726 D 273036 CDS YP_417118.1 82751377 3794603 complement(1793980..1794981) 1 NC_007622.1 o-succinylbenzoic acid synthetase 1794981 3794603 SAB1650c Staphylococcus aureus RF122 o-succinylbenzoic acid synthetase YP_417118.1 1793980 R 273036 CDS YP_417119.1 82751378 3794604 complement(1794986..1796464) 1 NC_007622.1 O-succinylbenzoate-CoA ligase 1796464 3794604 SAB1651c Staphylococcus aureus RF122 O-succinylbenzoate-CoA ligase YP_417119.1 1794986 R 273036 CDS YP_417120.1 82751379 3794606 1797416..1798030 1 NC_007622.1 hypothetical protein 1798030 3794606 SAB1653 Staphylococcus aureus RF122 hypothetical protein YP_417120.1 1797416 D 273036 CDS YP_417121.1 82751380 3794607 1798111..1799106 1 NC_007622.1 hypothetical protein 1799106 3794607 SAB1654 Staphylococcus aureus RF122 hypothetical protein YP_417121.1 1798111 D 273036 CDS YP_417122.1 82751381 3794608 1799182..1799808 1 NC_007622.1 lipoprotein 1799808 3794608 SAB1655 Staphylococcus aureus RF122 lipoprotein YP_417122.1 1799182 D 273036 CDS YP_417123.1 82751382 3794609 1799849..1800190 1 NC_007622.1 hypothetical protein 1800190 3794609 SAB1656 Staphylococcus aureus RF122 hypothetical protein YP_417123.1 1799849 D 273036 CDS YP_417124.1 82751383 3794610 1800291..1800863 1 NC_007622.1 hypothetical protein 1800863 3794610 SAB1657 Staphylococcus aureus RF122 hypothetical protein YP_417124.1 1800291 D 273036 CDS YP_417125.1 82751384 3794611 complement(1801196..1801639) 1 NC_007622.1 hypothetical protein 1801639 3794611 SAB1658c Staphylococcus aureus RF122 hypothetical protein YP_417125.1 1801196 R 273036 CDS YP_417126.1 82751385 3794612 complement(1801639..1802088) 1 NC_007622.1 hypothetical protein 1802088 3794612 SAB1659c Staphylococcus aureus RF122 hypothetical protein YP_417126.1 1801639 R 273036 CDS YP_417127.1 82751386 3794613 complement(1802088..1802282) 1 NC_007622.1 hypothetical protein 1802282 3794613 SAB1660c Staphylococcus aureus RF122 hypothetical protein YP_417127.1 1802088 R 273036 CDS YP_417128.1 82751387 3795102 complement(1802279..1802530) 1 NC_007622.1 hypothetical protein 1802530 3795102 SAB1661c Staphylococcus aureus RF122 hypothetical protein YP_417128.1 1802279 R 273036 CDS YP_417129.1 82751388 3795103 complement(1802530..1802973) 1 NC_007622.1 hypothetical protein 1802973 3795103 SAB1662c Staphylococcus aureus RF122 hypothetical protein YP_417129.1 1802530 R 273036 CDS YP_417130.1 82751389 3794099 1803492..1805915 1 NC_007622.1 hyaluronate lyase precursor 1805915 hysA1 3794099 hysA1 Staphylococcus aureus RF122 hyaluronate lyase precursor YP_417130.1 1803492 D 273036 CDS YP_417131.1 82751390 3795104 complement(1806041..1806418) 1 NC_007622.1 hypothetical protein 1806418 3795104 SAB1664c Staphylococcus aureus RF122 hypothetical protein YP_417131.1 1806041 R 273036 CDS YP_417132.1 82751391 3794090 complement(1813003..1814559) 1 NC_007622.1 type I restriction-modification system M subunit 1814559 hsdM 3794090 hsdM Staphylococcus aureus RF122 type I restriction-modification system M subunit YP_417132.1 1813003 R 273036 CDS YP_417133.1 82751392 3793006 complement(1814922..1815641) 1 NC_007622.1 serine proteinase 1815641 splF 3793006 splF Staphylococcus aureus RF122 serine proteinase YP_417133.1 1814922 R 273036 CDS YP_417134.1 82751393 3793005 complement(1815810..1816550) 1 NC_007622.1 serine proteinase 1816550 splE 3793005 splE Staphylococcus aureus RF122 serine proteinase YP_417134.1 1815810 R 273036 CDS YP_417135.1 82751394 3793004 complement(1816651..1817370) 1 NC_007622.1 serine proteinase 1817370 splC 3793004 splC Staphylococcus aureus RF122 serine proteinase YP_417135.1 1816651 R 273036 CDS YP_417136.1 82751395 3795108 complement(1817428..1818150) 1 NC_007622.1 serine proteinase 1818150 3795108 SAB1672c Staphylococcus aureus RF122 serine proteinase YP_417136.1 1817428 R 273036 CDS YP_417138.1 82751397 3795111 1819934..1820512 1 NC_007622.1 hypothetical protein 1820512 3795111 SAB1675 Staphylococcus aureus RF122 hypothetical protein YP_417138.1 1819934 D 273036 CDS YP_417139.1 82751398 3795112 complement(1820986..1821684) 1 NC_007622.1 hypothetical protein 1821684 3795112 SAB1676c Staphylococcus aureus RF122 hypothetical protein YP_417139.1 1820986 R 273036 CDS YP_417140.1 82751399 3795113 complement(1821681..1822442) 1 NC_007622.1 transport protein 1822442 3795113 SAB1677c Staphylococcus aureus RF122 transport protein YP_417140.1 1821681 R 273036 CDS YP_417141.1 82751400 3795114 complement(1822439..1823131) 1 NC_007622.1 transport protein 1823131 3795114 SAB1678c Staphylococcus aureus RF122 transport protein YP_417141.1 1822439 R 273036 CDS YP_417142.1 82751401 3795115 complement(1823154..1824527) 1 NC_007622.1 serine protease precursor 1824527 3795115 SAB1679c Staphylococcus aureus RF122 serine protease precursor YP_417142.1 1823154 R 273036 CDS YP_417143.1 82751402 3795116 complement(1824537..1825055) 1 NC_007622.1 hypothetical protein 1825055 3795116 SAB1680c Staphylococcus aureus RF122 hypothetical protein YP_417143.1 1824537 R 273036 CDS YP_417144.1 82751403 3795117 complement(1825071..1826315) 1 NC_007622.1 hypothetical protein 1826315 3795117 SAB1681c Staphylococcus aureus RF122 hypothetical protein YP_417144.1 1825071 R 273036 CDS YP_417145.1 82751404 3795118 complement(1826308..1829301) 1 NC_007622.1 hypothetical protein 1829301 3795118 SAB1682c Staphylococcus aureus RF122 hypothetical protein YP_417145.1 1826308 R 273036 CDS YP_417146.1 82751405 3795119 complement(1829366..1829509) 1 NC_007622.1 hypothetical protein 1829509 3795119 SAB1683c Staphylococcus aureus RF122 hypothetical protein YP_417146.1 1829366 R 273036 CDS YP_417147.1 82751406 3795120 1829951..1830142 1 NC_007622.1 hypothetical protein 1830142 3795120 SAB1684 Staphylococcus aureus RF122 hypothetical protein YP_417147.1 1829951 D 273036 CDS YP_417148.1 82751407 3793718 complement(1830243..1830386) 1 NC_007622.1 hypothetical protein 1830386 3793718 SAB1685c Staphylococcus aureus RF122 hypothetical protein YP_417148.1 1830243 R 273036 CDS YP_417149.1 82751408 3794758 complement(1830626..1831609) 1 NC_007622.1 leukotoxin D subunit 1831609 lukD 3794758 lukD Staphylococcus aureus RF122 leukotoxin D subunit YP_417149.1 1830626 R 273036 CDS YP_417150.1 82751409 3794759 complement(1831611..1832546) 1 NC_007622.1 leukotoxin E subunit 1832546 lukE 3794759 lukE Staphylococcus aureus RF122 leukotoxin E subunit YP_417150.1 1831611 R 273036 CDS YP_417151.1 82751410 3793719 1833270..1833383 1 NC_007622.1 hypothetical protein 1833383 3793719 SAB1688 Staphylococcus aureus RF122 hypothetical protein YP_417151.1 1833270 D 273036 CDS YP_417152.1 82751411 3793720 complement(1833727..1833870) 1 NC_007622.1 hypothetical protein 1833870 3793720 SAB1689c Staphylococcus aureus RF122 hypothetical protein YP_417152.1 1833727 R 273036 CDS YP_417153.1 82751412 3793721 1834173..1834769 1 NC_007622.1 hypothetical protein 1834769 3793721 SAB1690 Staphylococcus aureus RF122 hypothetical protein YP_417153.1 1834173 D 273036 CDS YP_417154.1 82751413 3793722 1834937..1836283 1 NC_007622.1 hypothetical protein 1836283 3793722 SAB1691 Staphylococcus aureus RF122 hypothetical protein YP_417154.1 1834937 D 273036 CDS YP_417155.1 82751414 3793723 1836565..1836771 1 NC_007622.1 hypothetical protein 1836771 3793723 SAB1692 Staphylococcus aureus RF122 hypothetical protein YP_417155.1 1836565 D 273036 CDS YP_417156.1 82751415 3793724 1836869..1837105 1 NC_007622.1 hypothetical protein 1837105 3793724 SAB1693 Staphylococcus aureus RF122 hypothetical protein YP_417156.1 1836869 D 273036 CDS YP_417157.1 82751416 3793725 1837147..1837902 1 NC_007622.1 hypothetical protein 1837902 3793725 SAB1694 Staphylococcus aureus RF122 hypothetical protein YP_417157.1 1837147 D 273036 CDS YP_417158.1 82751417 3793726 1838050..1838211 1 NC_007622.1 hypothetical protein 1838211 3793726 SAB1695 Staphylococcus aureus RF122 hypothetical protein YP_417158.1 1838050 D 273036 CDS YP_417159.1 82751418 3794615 complement(1838630..1839247) 1 NC_007622.1 enterotoxin G 1839247 seg 3794615 seg Staphylococcus aureus RF122 enterotoxin G YP_417159.1 1838630 R 273036 CDS YP_417160.1 82751419 3794619 complement(1839538..1840293) 1 NC_007622.1 enterotoxin N 1840293 sen 3794619 sen Staphylococcus aureus RF122 enterotoxin N YP_417160.1 1839538 R 273036 CDS YP_417161.1 82751420 3793186 complement(1840332..1841117) 1 NC_007622.1 enterotoxin type C variant 1841117 sec-variant 3793186 sec-variant Staphylococcus aureus RF122 enterotoxin type C variant YP_417161.1 1840332 R 273036 CDS YP_417162.1 82751421 3794616 complement(1841271..1841999) 1 NC_007622.1 enterotoxin I 1841999 sei 3794616 sei Staphylococcus aureus RF122 enterotoxin I YP_417162.1 1841271 R 273036 CDS YP_417163.1 82751422 3794620 complement(1843037..1843801) 1 NC_007622.1 enterotoxin O 1843801 seo 3794620 seo Staphylococcus aureus RF122 enterotoxin O YP_417163.1 1843037 R 273036 CDS YP_417164.1 82751423 3793727 complement(1844600..1844854) 1 NC_007622.1 hypothetical protein 1844854 3793727 SAB1702c Staphylococcus aureus RF122 hypothetical protein YP_417164.1 1844600 R 273036 CDS YP_417165.1 82751424 3793728 complement(1844930..1846375) 1 NC_007622.1 phage-related amidase 1846375 3793728 SAB1703c Staphylococcus aureus RF122 phage-related amidase YP_417165.1 1844930 R 273036 CDS YP_417166.1 82751425 3793729 complement(1846356..1846793) 1 NC_007622.1 phage-related holin 1846793 3793729 SAB1704c Staphylococcus aureus RF122 phage-related holin YP_417166.1 1846356 R 273036 CDS YP_417167.1 82751426 3793730 complement(1846844..1848856) 1 NC_007622.1 phage-related tail fiber 1848856 3793730 SAB1705c Staphylococcus aureus RF122 phage-related tail fiber YP_417167.1 1846844 R 273036 CDS YP_417168.1 82751427 3793731 complement(1848869..1850773) 1 NC_007622.1 phage-related cell wall hydrolase 1850773 3793731 SAB1706c Staphylococcus aureus RF122 phage-related cell wall hydrolase YP_417168.1 1848869 R 273036 CDS YP_417169.1 82751428 3793732 complement(1850910..1851215) 1 NC_007622.1 phage-like protein 1851215 3793732 SAB1707c Staphylococcus aureus RF122 phage-like protein YP_417169.1 1850910 R 273036 CDS YP_417170.1 82751429 3793733 complement(1851403..1851810) 1 NC_007622.1 phage-like protein 1851810 3793733 SAB1708c Staphylococcus aureus RF122 phage-like protein YP_417170.1 1851403 R 273036 CDS YP_417171.1 82751430 3793734 complement(1851810..1853633) 1 NC_007622.1 phage-like protein 1853633 3793734 SAB1709c Staphylococcus aureus RF122 phage-like protein YP_417171.1 1851810 R 273036 CDS YP_417172.1 82751431 3793735 complement(1853633..1855543) 1 NC_007622.1 phage-like protein 1855543 3793735 SAB1710c Staphylococcus aureus RF122 phage-like protein YP_417172.1 1853633 R 273036 CDS YP_417173.1 82751432 3793736 complement(1855558..1857459) 1 NC_007622.1 phage-like protein 1857459 3793736 SAB1711c Staphylococcus aureus RF122 phage-like protein YP_417173.1 1855558 R 273036 CDS YP_417174.1 82751433 3793737 complement(1857468..1858415) 1 NC_007622.1 phage-like protein 1858415 3793737 SAB1712c Staphylococcus aureus RF122 phage-like protein YP_417174.1 1857468 R 273036 CDS YP_417175.1 82751434 3795178 complement(1858428..1861892) 1 NC_007622.1 phage-like protein 1861892 3795178 SAB1713c Staphylococcus aureus RF122 phage-like protein YP_417175.1 1858428 R 273036 CDS YP_417176.1 82751435 3795179 complement(1861909..1862253) 1 NC_007622.1 phage-like protein 1862253 3795179 SAB1714c Staphylococcus aureus RF122 phage-like protein YP_417176.1 1861909 R 273036 CDS YP_417177.1 82751436 3795180 complement(1862283..1862648) 1 NC_007622.1 phage-like protein 1862648 3795180 SAB1715c Staphylococcus aureus RF122 phage-like protein YP_417177.1 1862283 R 273036 CDS YP_417178.1 82751437 3795181 complement(1862710..1863291) 1 NC_007622.1 phage-like protein 1863291 3795181 SAB1716c Staphylococcus aureus RF122 phage-like protein YP_417178.1 1862710 R 273036 CDS YP_417179.1 82751438 3795182 complement(1863309..1863692) 1 NC_007622.1 phage-like protein 1863692 3795182 SAB1717c Staphylococcus aureus RF122 phage-like protein YP_417179.1 1863309 R 273036 CDS YP_417180.1 82751439 3795183 complement(1863704..1864051) 1 NC_007622.1 phage-like protein 1864051 3795183 SAB1718c Staphylococcus aureus RF122 phage-like protein YP_417180.1 1863704 R 273036 CDS YP_417181.1 82751440 3795184 complement(1864051..1864353) 1 NC_007622.1 phage-like protein 1864353 3795184 SAB1719c Staphylococcus aureus RF122 phage-like protein YP_417181.1 1864051 R 273036 CDS YP_417182.1 82751441 3795185 complement(1864350..1864682) 1 NC_007622.1 phage-like protein 1864682 3795185 SAB1720c Staphylococcus aureus RF122 phage-like protein YP_417182.1 1864350 R 273036 CDS YP_417183.1 82751442 3795186 complement(1864691..1864978) 1 NC_007622.1 phage-like protein 1864978 3795186 SAB1721c Staphylococcus aureus RF122 phage-like protein YP_417183.1 1864691 R 273036 CDS YP_417184.1 82751443 3795187 complement(1865000..1865974) 1 NC_007622.1 phage-related head protein 1865974 3795187 SAB1722c Staphylococcus aureus RF122 phage-related head protein YP_417184.1 1865000 R 273036 CDS YP_417185.1 82751444 3795188 complement(1865988..1866602) 1 NC_007622.1 phage-like protein 1866602 3795188 SAB1723c Staphylococcus aureus RF122 phage-like protein YP_417185.1 1865988 R 273036 CDS YP_417186.1 82751445 3795189 complement(1866980..1867912) 1 NC_007622.1 phage-like protein 1867912 3795189 SAB1724c Staphylococcus aureus RF122 phage-like protein YP_417186.1 1866980 R 273036 CDS YP_417187.1 82751446 3795190 complement(1867976..1869517) 1 NC_007622.1 phage-like protein 1869517 3795190 SAB1725c Staphylococcus aureus RF122 phage-like protein YP_417187.1 1867976 R 273036 CDS YP_417188.1 82751447 3795191 complement(1869528..1870817) 1 NC_007622.1 phage-associated terminase large subunit 1870817 3795191 SAB1726c Staphylococcus aureus RF122 phage-associated terminase large subunit YP_417188.1 1869528 R 273036 CDS YP_417189.1 82751448 3795192 complement(1870820..1871329) 1 NC_007622.1 mobile-element-associated protein 1871329 3795192 SAB1727c Staphylococcus aureus RF122 mobile-element-associated protein YP_417189.1 1870820 R 273036 CDS YP_417190.1 82751449 3795193 complement(1871502..1871921) 1 NC_007622.1 mobile-element-associated regulatory protein 1871921 3795193 SAB1728c Staphylococcus aureus RF122 mobile-element-associated regulatory protein YP_417190.1 1871502 R 273036 CDS YP_417191.1 82751450 3793098 complement(1872083..1872256) 1 NC_007622.1 int gene transcriptional activator 1872256 rinB 3793098 rinB Staphylococcus aureus RF122 int gene transcriptional activator YP_417191.1 1872083 R 273036 CDS YP_417192.1 82751451 3795194 complement(1872253..1872459) 1 NC_007622.1 phage-like protein 1872459 3795194 SAB1730c Staphylococcus aureus RF122 phage-like protein YP_417192.1 1872253 R 273036 CDS YP_417193.1 82751452 3795195 complement(1872456..1872701) 1 NC_007622.1 phage-like protein 1872701 3795195 SAB1731c Staphylococcus aureus RF122 phage-like protein YP_417193.1 1872456 R 273036 CDS YP_417194.1 82751453 3795196 complement(1872738..1873274) 1 NC_007622.1 phage-like protein 1873274 3795196 SAB1732c Staphylococcus aureus RF122 phage-like protein YP_417194.1 1872738 R 273036 CDS YP_417195.1 82751454 3793407 complement(1873422..1873676) 1 NC_007622.1 phage-like protein 1873676 3793407 SAB1733c Staphylococcus aureus RF122 phage-like protein YP_417195.1 1873422 R 273036 CDS YP_417196.1 82751455 3793408 complement(1873736..1873972) 1 NC_007622.1 phage-like protein 1873972 3793408 SAB1734c Staphylococcus aureus RF122 phage-like protein YP_417196.1 1873736 R 273036 CDS YP_417197.1 82751456 3793409 complement(1873981..1874229) 1 NC_007622.1 phage-like protein 1874229 3793409 SAB1735c Staphylococcus aureus RF122 phage-like protein YP_417197.1 1873981 R 273036 CDS YP_417198.1 82751457 3793410 complement(1874229..1874483) 1 NC_007622.1 phage-like protein 1874483 3793410 SAB1736c Staphylococcus aureus RF122 phage-like protein YP_417198.1 1874229 R 273036 CDS YP_417199.1 82751458 3793411 complement(1874483..1874845) 1 NC_007622.1 phage-like protein 1874845 3793411 SAB1737c Staphylococcus aureus RF122 phage-like protein YP_417199.1 1874483 R 273036 CDS YP_417200.1 82751459 3793412 complement(1875036..1875440) 1 NC_007622.1 phage-like protein 1875440 3793412 SAB1738c Staphylococcus aureus RF122 phage-like protein YP_417200.1 1875036 R 273036 CDS YP_417201.1 82751460 3793413 complement(1875451..1875672) 1 NC_007622.1 phage-like protein 1875672 3793413 SAB1739c Staphylococcus aureus RF122 phage-like protein YP_417201.1 1875451 R 273036 CDS YP_417202.1 82751461 3793414 complement(1875675..1875890) 1 NC_007622.1 hypothetical protein 1875890 3793414 SAB1740c Staphylococcus aureus RF122 hypothetical protein YP_417202.1 1875675 R 273036 CDS YP_417203.1 82751462 3794490 complement(1875887..1877128) 1 NC_007622.1 replicative DNA helicase 1877128 dnaB 3794490 dnaB Staphylococcus aureus RF122 replicative DNA helicase YP_417203.1 1875887 R 273036 CDS YP_417204.1 82751463 3793415 complement(1877125..1877481) 1 NC_007622.1 hypothetical protein 1877481 3793415 SAB1742c Staphylococcus aureus RF122 hypothetical protein YP_417204.1 1877125 R 273036 CDS YP_417205.1 82751464 3793416 complement(1877481..1878236) 1 NC_007622.1 phage-like protein 1878236 3793416 SAB1743c Staphylococcus aureus RF122 phage-like protein YP_417205.1 1877481 R 273036 CDS YP_417206.1 82751465 3793417 complement(1878233..1878904) 1 NC_007622.1 phage-like protein 1878904 3793417 SAB1744c Staphylococcus aureus RF122 phage-like protein YP_417206.1 1878233 R 273036 CDS YP_417207.1 82751466 3793418 complement(1878918..1879343) 1 NC_007622.1 single strand DNA binding protein 1879343 3793418 SAB1745c Staphylococcus aureus RF122 single strand DNA binding protein YP_417207.1 1878918 R 273036 CDS YP_417208.1 82751467 3793419 complement(1879346..1879966) 1 NC_007622.1 phage-like protein 1879966 3793419 SAB1746c Staphylococcus aureus RF122 phage-like protein YP_417208.1 1879346 R 273036 CDS YP_417209.1 82751468 3793420 complement(1879959..1880180) 1 NC_007622.1 phage-like protein 1880180 3793420 SAB1747c Staphylococcus aureus RF122 phage-like protein YP_417209.1 1879959 R 273036 CDS YP_417210.1 82751469 3793421 complement(1880190..1880450) 1 NC_007622.1 phage-like protein 1880450 3793421 SAB1748c Staphylococcus aureus RF122 phage-like protein YP_417210.1 1880190 R 273036 CDS YP_417211.1 82751470 3793422 complement(1880455..1880757) 1 NC_007622.1 phage-like protein 1880757 3793422 SAB1749c Staphylococcus aureus RF122 phage-like protein YP_417211.1 1880455 R 273036 CDS YP_417212.1 82751471 3793423 complement(1880822..1881136) 1 NC_007622.1 hypothetical protein 1881136 3793423 SAB1750c Staphylococcus aureus RF122 hypothetical protein YP_417212.1 1880822 R 273036 CDS YP_417213.1 82751472 3793424 complement(1881141..1881311) 1 NC_007622.1 hypothetical protein 1881311 3793424 SAB1751c Staphylococcus aureus RF122 hypothetical protein YP_417213.1 1881141 R 273036 CDS YP_417214.1 82751473 3793425 complement(1881326..1881541) 1 NC_007622.1 hypothetical protein 1881541 3793425 SAB1752c Staphylococcus aureus RF122 hypothetical protein YP_417214.1 1881326 R 273036 CDS YP_417215.1 82751474 3793426 complement(1881557..1882306) 1 NC_007622.1 phage anti-repressor protein 1882306 3793426 SAB1753c Staphylococcus aureus RF122 phage anti-repressor protein YP_417215.1 1881557 R 273036 CDS YP_417216.1 82751475 3792803 1882363..1882953 1 NC_007622.1 phage-like protein 1882953 3792803 SAB1754 Staphylococcus aureus RF122 phage-like protein YP_417216.1 1882363 D 273036 CDS YP_417217.1 82751476 3792804 complement(1883134..1883922) 1 NC_007622.1 phage anti-repressor protein 1883922 3792804 SAB1755c Staphylococcus aureus RF122 phage anti-repressor protein YP_417217.1 1883134 R 273036 CDS YP_417218.1 82751477 3792805 complement(1883938..1884153) 1 NC_007622.1 phage-like protein 1884153 3792805 SAB1756c Staphylococcus aureus RF122 phage-like protein YP_417218.1 1883938 R 273036 CDS YP_417219.1 82751478 3792806 1884309..1884977 1 NC_007622.1 transcriptional repressor 1884977 3792806 SAB1757 Staphylococcus aureus RF122 transcriptional repressor YP_417219.1 1884309 D 273036 CDS YP_417220.1 82751479 3792807 1885034..1885534 1 NC_007622.1 hypothetical protein 1885534 3792807 SAB1758 Staphylococcus aureus RF122 hypothetical protein YP_417220.1 1885034 D 273036 CDS YP_417221.1 82751480 3792808 1885538..1886053 1 NC_007622.1 hypothetical protein 1886053 3792808 SAB1759 Staphylococcus aureus RF122 hypothetical protein YP_417221.1 1885538 D 273036 CDS YP_417222.1 82751481 3792809 1886112..1887176 1 NC_007622.1 integrase 1887176 3792809 SAB1760 Staphylococcus aureus RF122 integrase YP_417222.1 1886112 D 273036 CDS YP_417224.1 82751483 3792811 complement(1888575..1889129) 1 NC_007622.1 hypothetical protein 1889129 3792811 SAB1762c Staphylococcus aureus RF122 hypothetical protein YP_417224.1 1888575 R 273036 CDS YP_417225.1 82751484 3794912 complement(1889449..1890849) 1 NC_007622.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 1890849 hemY 3794912 hemY Staphylococcus aureus RF122 protoporphyrinogen oxidase YP_417225.1 1889449 R 273036 CDS YP_417226.1 82751485 3794910 complement(1890873..1891796) 1 NC_007622.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1891796 hemH 3794910 hemH Staphylococcus aureus RF122 ferrochelatase YP_417226.1 1890873 R 273036 CDS YP_417227.1 82751486 3794909 complement(1891854..1892891) 1 NC_007622.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1892891 hemE 3794909 hemE Staphylococcus aureus RF122 uroporphyrinogen decarboxylase YP_417227.1 1891854 R 273036 CDS YP_417228.1 82751487 3794334 1893152..1893655 1 NC_007622.1 signal transduction protein 1893655 traP 3794334 traP Staphylococcus aureus RF122 signal transduction protein YP_417228.1 1893152 D 273036 CDS YP_417229.1 82751488 3792812 complement(1893779..1895002) 1 NC_007622.1 ABC transporter 1895002 3792812 SAB1767c Staphylococcus aureus RF122 ABC transporter YP_417229.1 1893779 R 273036 CDS YP_417230.1 82751489 3792813 complement(1894995..1895735) 1 NC_007622.1 ABC transporter ATP-binding protein 1895735 3792813 SAB1768c Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_417230.1 1894995 R 273036 CDS YP_417231.1 82751490 3792814 1895869..1896291 1 NC_007622.1 cell cycle regulation protein 1896291 3792814 SAB1769 Staphylococcus aureus RF122 cell cycle regulation protein YP_417231.1 1895869 D 273036 CDS YP_417232.1 82751491 3792815 1896433..1896798 1 NC_007622.1 hypothetical protein 1896798 3792815 SAB1770 Staphylococcus aureus RF122 hypothetical protein YP_417232.1 1896433 D 273036 CDS YP_417233.1 82751492 3792816 1896776..1896982 1 NC_007622.1 hypothetical protein 1896982 3792816 SAB1771 Staphylococcus aureus RF122 hypothetical protein YP_417233.1 1896776 D 273036 CDS YP_417234.1 82751493 3792817 1897321..1897470 1 NC_007622.1 hypothetical protein 1897470 3792817 SAB1772 Staphylococcus aureus RF122 hypothetical protein YP_417234.1 1897321 D 273036 CDS YP_417235.1 82751494 3792818 1897531..1898088 1 NC_007622.1 hypothetical protein 1898088 3792818 SAB1773 Staphylococcus aureus RF122 hypothetical protein YP_417235.1 1897531 D 273036 CDS YP_417236.1 82751495 3792819 1898293..1899255 1 NC_007622.1 peptidyl-prolyl cis-isomerase 1899255 3792819 SAB1774 Staphylococcus aureus RF122 peptidyl-prolyl cis-isomerase YP_417236.1 1898293 D 273036 CDS YP_417237.1 82751496 3792820 complement(1899376..1900317) 1 NC_007622.1 catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease YhaM 1900317 3792820 SAB1775c Staphylococcus aureus RF122 3'-5' exoribonuclease YhaM YP_417237.1 1899376 R 273036 CDS YP_417238.1 82751497 3792821 complement(1900314..1903250) 1 NC_007622.1 hypothetical protein 1903250 3792821 SAB1776c Staphylococcus aureus RF122 hypothetical protein YP_417238.1 1900314 R 273036 CDS YP_417239.1 82751498 3793504 complement(1903240..1904436) 1 NC_007622.1 hypothetical protein 1904436 3793504 SAB1777c Staphylococcus aureus RF122 hypothetical protein YP_417239.1 1903240 R 273036 CDS YP_417240.1 82751499 3793505 complement(1905520..1905864) 1 NC_007622.1 hypothetical protein 1905864 3793505 SAB1778c Staphylococcus aureus RF122 hypothetical protein YP_417240.1 1905520 R 273036 CDS YP_417241.1 82751500 3793506 complement(1905933..1907057) 1 NC_007622.1 hypothetical protein 1907057 3793506 SAB1779c Staphylococcus aureus RF122 hypothetical protein YP_417241.1 1905933 R 273036 CDS YP_417242.1 82751501 3793507 complement(1907236..1907700) 1 NC_007622.1 DNA-binding protein 1907700 3793507 SAB1780c Staphylococcus aureus RF122 DNA-binding protein YP_417242.1 1907236 R 273036 CDS YP_417243.1 82751502 3793508 complement(1908056..1908679) 1 NC_007622.1 two-component response regulator protein 1908679 3793508 SAB1781c Staphylococcus aureus RF122 two-component response regulator protein YP_417243.1 1908056 R 273036 CDS YP_417244.1 82751503 3793509 complement(1908701..1909813) 1 NC_007622.1 two-component response system sensor histidine kinase 1909813 3793509 SAB1782c Staphylococcus aureus RF122 two-component response system sensor histidine kinase YP_417244.1 1908701 R 273036 CDS YP_417245.1 82751504 3793510 1909976..1910797 1 NC_007622.1 RNA pseudouridylate synthase 1910797 3793510 SAB1783 Staphylococcus aureus RF122 RNA pseudouridylate synthase YP_417245.1 1909976 D 273036 CDS YP_417246.1 82751505 3794417 complement(1911248..1912633) 1 NC_007622.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1912633 fumC 3794417 fumC Staphylococcus aureus RF122 fumarate hydratase YP_417246.1 1911248 R 273036 CDS YP_417247.1 82751506 3793511 complement(1912829..1913251) 1 NC_007622.1 hypothetical protein 1913251 3793511 SAB1785c Staphylococcus aureus RF122 hypothetical protein YP_417247.1 1912829 R 273036 CDS YP_417248.1 82751507 3793512 1913343..1913645 1 NC_007622.1 hypothetical protein 1913645 3793512 SAB1786 Staphylococcus aureus RF122 hypothetical protein YP_417248.1 1913343 D 273036 CDS YP_417249.2 159162018 3793513 complement(1913710..1913862) 1 NC_007622.1 hypothetical protein 1913862 3793513 SAB1787c Staphylococcus aureus RF122 hypothetical protein YP_417249.2 1913710 R 273036 CDS YP_417250.1 82751509 3793514 complement(1913887..1914486) 1 NC_007622.1 hypothetical protein 1914486 3793514 SAB1788c Staphylococcus aureus RF122 hypothetical protein YP_417250.1 1913887 R 273036 CDS YP_417251.1 82751510 3793515 complement(1914645..1915115) 1 NC_007622.1 rRNA methylase-like protein 1915115 3793515 SAB1789c Staphylococcus aureus RF122 rRNA methylase-like protein YP_417251.1 1914645 R 273036 CDS YP_417252.1 82751511 3793516 complement(1915120..1916247) 1 NC_007622.1 iron-sulfur binding protein 1916247 3793516 SAB1790c Staphylococcus aureus RF122 iron-sulfur binding protein YP_417252.1 1915120 R 273036 CDS YP_417253.1 82751512 3793648 complement(1916398..1917126) 1 NC_007622.1 glutamate ATP-binding ABC transporter 1917126 glnQ 3793648 glnQ Staphylococcus aureus RF122 glutamate ATP-binding ABC transporter YP_417253.1 1916398 R 273036 CDS YP_417254.1 82751513 3793517 complement(1917113..1918570) 1 NC_007622.1 substrate-binding glutamine ABC transporter 1918570 3793517 SAB1792c Staphylococcus aureus RF122 substrate-binding glutamine ABC transporter YP_417254.1 1917113 R 273036 CDS YP_417255.1 82751514 3793518 complement(1918829..1919890) 1 NC_007622.1 hypothetical protein 1919890 3793518 SAB1793c Staphylococcus aureus RF122 hypothetical protein YP_417255.1 1918829 R 273036 CDS YP_417256.1 82751515 3794464 complement(1928745..1929191) 1 NC_007622.1 peroxide operon regulator 1929191 perR 3794464 perR Staphylococcus aureus RF122 peroxide operon regulator YP_417256.1 1928745 R 273036 CDS YP_417257.1 82751516 3793519 complement(1929288..1930238) 1 NC_007622.1 hypothetical protein 1930238 3793519 SAB1795c Staphylococcus aureus RF122 hypothetical protein YP_417257.1 1929288 R 273036 CDS YP_417258.1 82751517 3793520 complement(1930244..1930699) 1 NC_007622.1 bacterioferritin comigratory protein 1930699 3793520 SAB1796c Staphylococcus aureus RF122 bacterioferritin comigratory protein YP_417258.1 1930244 R 273036 CDS YP_417259.1 82751518 3793521 1930780..1932069 1 NC_007622.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 1932069 3793521 SAB1797 Staphylococcus aureus RF122 glutamate-1-semialdehyde aminotransferase YP_417259.1 1930780 D 273036 CDS YP_417260.1 82751519 3793522 1932362..1933456 1 NC_007622.1 hypothetical protein 1933456 3793522 SAB1798 Staphylococcus aureus RF122 hypothetical protein YP_417260.1 1932362 D 273036 CDS YP_417261.1 82751520 3793523 complement(1933647..1935383) 1 NC_007622.1 ATP-binding ABC transporter 1935383 3793523 SAB1799c Staphylococcus aureus RF122 ATP-binding ABC transporter YP_417261.1 1933647 R 273036 CDS YP_417262.1 82751521 3794203 complement(1935673..1936215) 1 NC_007622.1 hypothetical protein 1936215 3794203 SAB1800c Staphylococcus aureus RF122 hypothetical protein YP_417262.1 1935673 R 273036 CDS YP_417263.1 82751522 3794204 complement(1936518..1937555) 1 NC_007622.1 A/G-specific adenine glycosylase DNA repair protein 1937555 3794204 SAB1801c Staphylococcus aureus RF122 A/G-specific adenine glycosylase DNA repair protein YP_417263.1 1936518 R 273036 CDS YP_417264.1 82751523 3794205 1937707..1938684 1 NC_007622.1 hypothetical protein 1938684 3794205 SAB1802 Staphylococcus aureus RF122 hypothetical protein YP_417264.1 1937707 D 273036 CDS YP_417265.1 82751524 3794206 complement(1938945..1939781) 1 NC_007622.1 hypothetical protein 1939781 3794206 SAB1803c Staphylococcus aureus RF122 hypothetical protein YP_417265.1 1938945 R 273036 CDS YP_417266.1 82751525 3794207 complement(1939790..1941307) 1 NC_007622.1 hypothetical protein 1941307 3794207 SAB1804c Staphylococcus aureus RF122 hypothetical protein YP_417266.1 1939790 R 273036 CDS YP_417267.1 82751526 3794208 complement(1941615..1942433) 1 NC_007622.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1942433 recX 3794208 recX Staphylococcus aureus RF122 recombination regulator RecX YP_417267.1 1941615 R 273036 CDS YP_417268.1 82751527 3794209 complement(1942694..1943503) 1 NC_007622.1 monofunctional; catalyzes the elongation of glycan strands in cell wall biosynthesis; glycosyltransferase 1943503 3794209 SAB1806c Staphylococcus aureus RF122 glycosyltransferase YP_417268.1 1942694 R 273036 CDS YP_417269.1 82751528 3794210 complement(1943843..1944358) 1 NC_007622.1 hypothetical protein 1944358 3794210 SAB1807c Staphylococcus aureus RF122 hypothetical protein YP_417269.1 1943843 R 273036 CDS YP_417270.1 82751529 3794211 complement(1944488..1944649) 1 NC_007622.1 hypothetical protein 1944649 3794211 SAB1808c Staphylococcus aureus RF122 hypothetical protein YP_417270.1 1944488 R 273036 CDS YP_417271.1 82751530 3794212 1944872..1946023 1 NC_007622.1 hypothetical protein 1946023 3794212 SAB1809 Staphylococcus aureus RF122 hypothetical protein YP_417271.1 1944872 D 273036 CDS YP_417272.1 82751531 3794213 complement(1946284..1946814) 1 NC_007622.1 hypothetical protein 1946814 3794213 SAB1810c Staphylococcus aureus RF122 hypothetical protein YP_417272.1 1946284 R 273036 CDS YP_417273.1 82751532 3794214 complement(1946904..1948151) 1 NC_007622.1 aminopeptidase 1948151 3794214 SAB1811c Staphylococcus aureus RF122 aminopeptidase YP_417273.1 1946904 R 273036 CDS YP_417274.1 82751533 3794215 complement(1948163..1948363) 1 NC_007622.1 hypothetical protein 1948363 3794215 SAB1812c Staphylococcus aureus RF122 hypothetical protein YP_417274.1 1948163 R 273036 CDS YP_417275.1 82751534 3794216 1948510..1948974 1 NC_007622.1 protein tyrosine phosphatase 1948974 3794216 SAB1813 Staphylococcus aureus RF122 protein tyrosine phosphatase YP_417275.1 1948510 D 273036 CDS YP_417276.1 82751535 3794217 1948981..1949256 1 NC_007622.1 hypothetical protein 1949256 3794217 SAB1814 Staphylococcus aureus RF122 hypothetical protein YP_417276.1 1948981 D 273036 CDS YP_417277.1 82751536 3794218 1949534..1950751 1 NC_007622.1 hypothetical protein 1950751 3794218 SAB1815 Staphylococcus aureus RF122 hypothetical protein YP_417277.1 1949534 D 273036 CDS YP_417278.1 82751537 3794219 complement(1950864..1951493) 1 NC_007622.1 two-component response regulator 1951493 3794219 SAB1816c Staphylococcus aureus RF122 two-component response regulator YP_417278.1 1950864 R 273036 CDS YP_417279.1 82751538 3794175 complement(1951483..1952526) 1 NC_007622.1 two-component sensor histidine kinase 1952526 vraS 3794175 vraS Staphylococcus aureus RF122 two-component sensor histidine kinase YP_417279.1 1951483 R 273036 CDS YP_417280.1 82751539 3794034 complement(1952523..1953224) 1 NC_007622.1 hypothetical protein 1953224 3794034 SAB1818c Staphylococcus aureus RF122 hypothetical protein YP_417280.1 1952523 R 273036 CDS YP_417281.1 82751540 3794220 complement(1953239..1953625) 1 NC_007622.1 hypothetical protein 1953625 3794220 SAB1819c Staphylococcus aureus RF122 hypothetical protein YP_417281.1 1953239 R 273036 CDS YP_417282.1 82751541 3794221 complement(1953842..1954600) 1 NC_007622.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1954600 3794221 SAB1820c Staphylococcus aureus RF122 methionine aminopeptidase YP_417282.1 1953842 R 273036 CDS YP_417283.1 82751542 3793016 1955012..1955998 1 NC_007622.1 hypothetical protein 1955998 3793016 SAB1821 Staphylococcus aureus RF122 hypothetical protein YP_417283.1 1955012 D 273036 CDS YP_417284.1 82751543 3793017 complement(1956428..1956841) 1 NC_007622.1 hypothetical protein 1956841 3793017 SAB1822c Staphylococcus aureus RF122 hypothetical protein YP_417284.1 1956428 R 273036 CDS YP_417285.1 82751544 3793018 complement(1957066..1957797) 1 NC_007622.1 cobyric acid synthase 1957797 3793018 SAB1823c Staphylococcus aureus RF122 cobyric acid synthase YP_417285.1 1957066 R 273036 CDS YP_417286.1 82751545 3793019 complement(1957799..1959112) 1 NC_007622.1 UDP-N-acetylmuramyl tripeptide synthase 1959112 3793019 SAB1824c Staphylococcus aureus RF122 UDP-N-acetylmuramyl tripeptide synthase YP_417286.1 1957799 R 273036 CDS YP_417287.1 82751546 3794343 1959407..1959907 1 NC_007622.1 ferritin 1959907 ftn 3794343 ftn Staphylococcus aureus RF122 ferritin YP_417287.1 1959407 D 273036 CDS YP_417288.1 82751547 3793020 1960298..1960852 1 NC_007622.1 DNA polymerase III alpha chain 1960852 3793020 SAB1826 Staphylococcus aureus RF122 DNA polymerase III alpha chain YP_417288.1 1960298 D 273036 CDS YP_417289.1 82751548 3793021 complement(1961004..1961990) 1 NC_007622.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1961990 3793021 SAB1827c Staphylococcus aureus RF122 DNA polymerase IV YP_417289.1 1961004 R 273036 CDS YP_417290.1 82751549 3794035 complement(1962237..1962767) 1 NC_007622.1 hypothetical protein 1962767 3794035 SAB1828c Staphylococcus aureus RF122 hypothetical protein YP_417290.1 1962237 R 273036 CDS YP_417291.1 82751550 3793022 complement(1962937..1964298) 1 NC_007622.1 RNA methyltransferase 1964298 3793022 SAB1829c Staphylococcus aureus RF122 RNA methyltransferase YP_417291.1 1962937 R 273036 CDS YP_417292.1 82751551 3793023 complement(1964379..1965326) 1 NC_007622.1 similar to YegS from E. coli; lipid kinase 1965326 3793023 SAB1830c Staphylococcus aureus RF122 lipid kinase YP_417292.1 1964379 R 273036 CDS YP_417293.1 82751552 3793024 complement(1965417..1965647) 1 NC_007622.1 hypothetical protein 1965647 3793024 SAB1831c Staphylococcus aureus RF122 hypothetical protein YP_417293.1 1965417 R 273036 CDS YP_417294.1 82751553 3794353 complement(1966094..1967521) 1 NC_007622.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1967521 gatB 3794353 gatB Staphylococcus aureus RF122 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_417294.1 1966094 R 273036 CDS YP_417295.1 82751554 3794352 complement(1967534..1968991) 1 NC_007622.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1968991 gatA 3794352 gatA Staphylococcus aureus RF122 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_417295.1 1967534 R 273036 CDS YP_417296.1 82751555 3794354 complement(1968993..1969295) 1 NC_007622.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1969295 gatC 3794354 gatC Staphylococcus aureus RF122 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_417296.1 1968993 R 273036 CDS YP_417297.1 82751556 3794683 1969661..1971199 1 NC_007622.1 high affinity proline permease 1971199 putP 3794683 putP Staphylococcus aureus RF122 high affinity proline permease YP_417297.1 1969661 D 273036 CDS YP_417298.1 82751557 3793025 complement(1971358..1971711) 1 NC_007622.1 transcriptional regulator 1971711 3793025 SAB1836c Staphylococcus aureus RF122 transcriptional regulator YP_417298.1 1971358 R 273036 CDS YP_417299.1 82751558 3793026 1971836..1972795 1 NC_007622.1 hypothetical protein 1972795 3793026 SAB1837 Staphylococcus aureus RF122 hypothetical protein YP_417299.1 1971836 D 273036 CDS YP_417300.1 82751559 3793027 complement(1973079..1974278) 1 NC_007622.1 lipoprotein 1974278 3793027 SAB1838c Staphylococcus aureus RF122 lipoprotein YP_417300.1 1973079 R 273036 CDS YP_417301.1 82751560 3794751 complement(1974291..1976294) 1 NC_007622.1 DNA ligase 1976294 lig 3794751 lig Staphylococcus aureus RF122 DNA ligase YP_417301.1 1974291 R 273036 CDS YP_417302.1 82751561 3794124 complement(1976298..1978490) 1 NC_007622.1 ATP-dependent DNA helicase 1978490 pcrA 3794124 pcrA Staphylococcus aureus RF122 ATP-dependent DNA helicase YP_417302.1 1976298 R 273036 CDS YP_417303.1 82751562 3793028 complement(1978487..1979179) 1 NC_007622.1 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase-like protein 1979179 3793028 SAB1841c Staphylococcus aureus RF122 geranylgeranylglyceryl phosphate synthase-like protein YP_417303.1 1978487 R 273036 CDS YP_417304.1 82751563 3793029 complement(1979351..1979653) 1 NC_007622.1 hypothetical protein 1979653 3793029 SAB1842c Staphylococcus aureus RF122 hypothetical protein YP_417304.1 1979351 R 273036 CDS YP_417305.1 82751564 3794044 complement(1979762..1981057) 1 NC_007622.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1981057 purB 3794044 purB Staphylococcus aureus RF122 adenylosuccinate lyase YP_417305.1 1979762 R 273036 CDS YP_417307.1 82751566 3793031 1981918..1983084 1 NC_007622.1 staphopain cysteine proteinase 1983084 3793031 SAB1845 Staphylococcus aureus RF122 staphopain cysteine proteinase YP_417307.1 1981918 D 273036 CDS YP_417308.1 82751567 3793032 1983115..1983441 1 NC_007622.1 hypothetical protein 1983441 3793032 SAB1846 Staphylococcus aureus RF122 hypothetical protein YP_417308.1 1983115 D 273036 CDS YP_417309.1 82751568 3793033 complement(1983733..1983906) 1 NC_007622.1 hypothetical protein 1983906 3793033 SAB1847c Staphylococcus aureus RF122 hypothetical protein YP_417309.1 1983733 R 273036 CDS YP_417310.1 82751569 3793034 complement(1983887..1984489) 1 NC_007622.1 hypothetical protein 1984489 3793034 SAB1848c Staphylococcus aureus RF122 hypothetical protein YP_417310.1 1983887 R 273036 CDS YP_417311.1 82751570 3793035 complement(1984759..1985580) 1 NC_007622.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1985580 nadE 3793035 nadE Staphylococcus aureus RF122 NAD synthetase YP_417311.1 1984759 R 273036 CDS YP_417312.1 82751571 3794634 complement(1985573..1987042) 1 NC_007622.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1987042 3794634 SAB1850c Staphylococcus aureus RF122 nicotinate phosphoribosyltransferase YP_417312.1 1985573 R 273036 CDS YP_417313.1 82751572 3794635 1987226..1988302 1 NC_007622.1 nitric oxide synthase 1988302 3794635 SAB1851 Staphylococcus aureus RF122 nitric oxide synthase YP_417313.1 1987226 D 273036 CDS YP_417314.1 82751573 3794636 1988322..1989116 1 NC_007622.1 hypothetical protein 1989116 3794636 SAB1852 Staphylococcus aureus RF122 hypothetical protein YP_417314.1 1988322 D 273036 CDS YP_417315.1 82751574 3794637 complement(1989306..1990868) 1 NC_007622.1 sodium-sulfate symport protein 1990868 3794637 SAB1853c Staphylococcus aureus RF122 sodium-sulfate symport protein YP_417315.1 1989306 R 273036 CDS YP_417316.1 82751575 3794638 complement(1991074..1992171) 1 NC_007622.1 hypothetical protein 1992171 3794638 SAB1854c Staphylococcus aureus RF122 hypothetical protein YP_417316.1 1991074 R 273036 CDS YP_417317.1 82751576 3794639 1992543..1993103 1 NC_007622.1 bifunctional pyrazinamidase/nicotinamidase 1993103 3794639 SAB1855 Staphylococcus aureus RF122 bifunctional pyrazinamidase/nicotinamidase YP_417317.1 1992543 D 273036 CDS YP_417318.1 82751577 3794029 1993156..1994085 1 NC_007622.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 1994085 ppaC 3794029 ppaC Staphylococcus aureus RF122 manganese-dependent inorganic pyrophosphatase YP_417318.1 1993156 D 273036 CDS YP_417319.1 82751578 3794640 1994503..1995882 1 NC_007622.1 aldehyde dehydrogenase 1995882 3794640 SAB1857 Staphylococcus aureus RF122 aldehyde dehydrogenase YP_417319.1 1994503 D 273036 CDS YP_417320.1 82751579 3794641 complement(1996002..1997030) 1 NC_007622.1 hypothetical protein 1997030 3794641 SAB1858c Staphylococcus aureus RF122 hypothetical protein YP_417320.1 1996002 R 273036 CDS YP_417321.1 82751580 3794642 1997301..1997702 1 NC_007622.1 hypothetical protein 1997702 3794642 SAB1859 Staphylococcus aureus RF122 hypothetical protein YP_417321.1 1997301 D 273036 CDS YP_417322.1 82751581 3794643 complement(1997759..1997932) 1 NC_007622.1 hypothetical protein 1997932 3794643 SAB1860c Staphylococcus aureus RF122 hypothetical protein YP_417322.1 1997759 R 273036 CDS YP_417323.1 82751582 3794644 1998383..1999423 1 NC_007622.1 hypothetical protein 1999423 3794644 SAB1861 Staphylococcus aureus RF122 hypothetical protein YP_417323.1 1998383 D 273036 CDS YP_417324.1 82751583 3794645 complement(1999480..2000322) 1 NC_007622.1 hypothetical protein 2000322 3794645 SAB1862c Staphylococcus aureus RF122 hypothetical protein YP_417324.1 1999480 R 273036 CDS YP_417325.1 82751584 3794646 complement(2000319..2000876) 1 NC_007622.1 hypothetical protein 2000876 3794646 SAB1863c Staphylococcus aureus RF122 hypothetical protein YP_417325.1 2000319 R 273036 CDS YP_417326.1 82751585 3794647 complement(2000936..2001460) 1 NC_007622.1 hypothetical protein 2001460 3794647 SAB1864c Staphylococcus aureus RF122 hypothetical protein YP_417326.1 2000936 R 273036 CDS YP_417327.1 82751586 3794648 2001581..2002144 1 NC_007622.1 hypothetical protein 2002144 3794648 SAB1865 Staphylococcus aureus RF122 hypothetical protein YP_417327.1 2001581 D 273036 CDS YP_417328.1 82751587 3794649 complement(2002210..2002950) 1 NC_007622.1 hypothetical protein 2002950 3794649 SAB1866c Staphylococcus aureus RF122 hypothetical protein YP_417328.1 2002210 R 273036 CDS YP_417329.1 82751588 3794650 complement(2002950..2003822) 1 NC_007622.1 transport protein 2003822 3794650 SAB1867c Staphylococcus aureus RF122 transport protein YP_417329.1 2002950 R 273036 CDS YP_417330.1 82751589 3794651 complement(2003819..2004499) 1 NC_007622.1 hypothetical protein 2004499 3794651 SAB1868c Staphylococcus aureus RF122 hypothetical protein YP_417330.1 2003819 R 273036 CDS YP_417331.1 82751590 3794652 complement(2004500..2005396) 1 NC_007622.1 ABC transporter 2005396 3794652 SAB1869c Staphylococcus aureus RF122 ABC transporter YP_417331.1 2004500 R 273036 CDS YP_417332.1 82751591 3794006 complement(2005393..2005773) 1 NC_007622.1 GntR family transcriptional regulator 2005773 3794006 SAB1870c Staphylococcus aureus RF122 GntR family transcriptional regulator YP_417332.1 2005393 R 273036 CDS YP_417333.1 82751592 3794007 complement(2006271..2006447) 1 NC_007622.1 hypothetical protein 2006447 3794007 SAB1871c Staphylococcus aureus RF122 hypothetical protein YP_417333.1 2006271 R 273036 CDS YP_417334.1 82751593 3794008 2006988..2008274 1 NC_007622.1 hypothetical protein 2008274 3794008 SAB1872 Staphylococcus aureus RF122 hypothetical protein YP_417334.1 2006988 D 273036 CDS YP_417335.1 82751594 3794009 complement(2008883..2009965) 1 NC_007622.1 cell surface protein 2009965 3794009 SAB1873c Staphylococcus aureus RF122 cell surface protein YP_417335.1 2008883 R 273036 CDS YP_417336.1 82751595 3794010 2010354..2011346 1 NC_007622.1 beta-hemolysin 2011346 3794010 SAB1874 Staphylococcus aureus RF122 beta-hemolysin YP_417336.1 2010354 D 273036 CDS YP_417337.1 82751596 3794011 complement(2011862..2012878) 1 NC_007622.1 leukocidin F subunit 2012878 3794011 SAB1875c Staphylococcus aureus RF122 leukocidin F subunit YP_417337.1 2011862 R 273036 CDS YP_417338.1 82751597 3794012 complement(2012900..2013955) 1 NC_007622.1 leukocidin S subunit 2013955 3794012 SAB1876c Staphylococcus aureus RF122 leukocidin S subunit YP_417338.1 2012900 R 273036 CDS YP_417339.1 82751598 3794013 2014391..2015614 1 NC_007622.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2015614 3794013 SAB1877 Staphylococcus aureus RF122 succinyl-diaminopimelate desuccinylase YP_417339.1 2014391 D 273036 CDS YP_417340.1 82751599 3794014 complement(2016112..2016450) 1 NC_007622.1 hypothetical protein 2016450 3794014 SAB1878c Staphylococcus aureus RF122 hypothetical protein YP_417340.1 2016112 R 273036 CDS YP_417341.1 82751600 3794015 complement(2016572..2016982) 1 NC_007622.1 hypothetical protein 2016982 3794015 SAB1879c Staphylococcus aureus RF122 hypothetical protein YP_417341.1 2016572 R 273036 CDS YP_417342.1 82751601 3794016 complement(2016985..2018055) 1 NC_007622.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 2018055 3794016 SAB1880c Staphylococcus aureus RF122 5-aminolevulinate synthase YP_417342.1 2016985 R 273036 CDS YP_417343.1 82751602 3794017 complement(2018495..2018689) 1 NC_007622.1 hypothetical protein 2018689 3794017 SAB1881c Staphylococcus aureus RF122 hypothetical protein YP_417343.1 2018495 R 273036 CDS YP_417344.1 82751603 3794018 2018763..2020070 1 NC_007622.1 sodium transport protein 2020070 3794018 SAB1882 Staphylococcus aureus RF122 sodium transport protein YP_417344.1 2018763 D 273036 CDS YP_417345.1 82751604 3794019 2020407..2020628 1 NC_007622.1 transposase 2020628 3794019 SAB1883 Staphylococcus aureus RF122 transposase YP_417345.1 2020407 D 273036 CDS YP_417346.1 82751605 3794020 complement(2020648..2021274) 1 NC_007622.1 phage-like protein 2021274 3794020 SAB1884c Staphylococcus aureus RF122 phage-like protein YP_417346.1 2020648 R 273036 CDS YP_417347.1 82751606 3794021 complement(2021271..2021450) 1 NC_007622.1 hypothetical protein 2021450 3794021 SAB1885c Staphylococcus aureus RF122 hypothetical protein YP_417347.1 2021271 R 273036 CDS YP_417348.1 82751607 3794024 complement(2023094..2023228) 1 NC_007622.1 hypothetical protein 2023228 3794024 SAB1888c Staphylococcus aureus RF122 hypothetical protein YP_417348.1 2023094 R 273036 CDS YP_417349.1 82751608 3794025 complement(2023929..2024429) 1 NC_007622.1 hypothetical protein 2024429 3794025 SAB1889c Staphylococcus aureus RF122 hypothetical protein YP_417349.1 2023929 R 273036 CDS YP_417350.1 82751609 3793036 2024780..2024896 1 NC_007622.1 hypothetical protein 2024896 3793036 SAB1890 Staphylococcus aureus RF122 hypothetical protein YP_417350.1 2024780 D 273036 CDS YP_417351.1 82751610 3793037 2025043..2025726 1 NC_007622.1 hypothetical protein 2025726 3793037 SAB1891 Staphylococcus aureus RF122 hypothetical protein YP_417351.1 2025043 D 273036 CDS YP_417352.1 82751611 3793038 complement(2025927..2027396) 1 NC_007622.1 multidrug resistance protein 2027396 3793038 SAB1892c Staphylococcus aureus RF122 multidrug resistance protein YP_417352.1 2025927 R 273036 CDS YP_417353.1 82751612 3793039 complement(2027398..2027544) 1 NC_007622.1 hypothetical protein 2027544 3793039 SAB1893c Staphylococcus aureus RF122 hypothetical protein YP_417353.1 2027398 R 273036 CDS YP_417354.1 82751613 3793041 complement(2028146..2028487) 1 NC_007622.1 mobile element-associated protein 2028487 3793041 SAB1895c Staphylococcus aureus RF122 mobile element-associated protein YP_417354.1 2028146 R 273036 CDS YP_417355.1 82751614 3793042 complement(2028490..2029065) 1 NC_007622.1 mobile element-associated protein 2029065 3793042 SAB1896c Staphylococcus aureus RF122 mobile element-associated protein YP_417355.1 2028490 R 273036 CDS YP_417356.1 82751615 3793043 complement(2029068..2029286) 1 NC_007622.1 mobile element-associated protein 2029286 3793043 SAB1897c Staphylococcus aureus RF122 mobile element-associated protein YP_417356.1 2029068 R 273036 CDS YP_417357.1 82751616 3793044 complement(2029304..2029882) 1 NC_007622.1 mobile element-associated protein 2029882 3793044 SAB1898c Staphylococcus aureus RF122 mobile element-associated protein YP_417357.1 2029304 R 273036 CDS YP_417358.1 82751617 3793045 complement(2029894..2030235) 1 NC_007622.1 mobile element-associated protein 2030235 3793045 SAB1899c Staphylococcus aureus RF122 mobile element-associated protein YP_417358.1 2029894 R 273036 CDS YP_417359.1 82751618 3793046 complement(2030416..2030541) 1 NC_007622.1 hypothetical protein 2030541 3793046 SAB1900c Staphylococcus aureus RF122 hypothetical protein YP_417359.1 2030416 R 273036 CDS YP_417360.1 82751619 3793047 complement(2030553..2030726) 1 NC_007622.1 hypothetical protein 2030726 3793047 SAB1901c Staphylococcus aureus RF122 hypothetical protein YP_417360.1 2030553 R 273036 CDS YP_417361.1 82751620 3793048 complement(2030752..2031393) 1 NC_007622.1 mobile element-associated protein 2031393 3793048 SAB1902c Staphylococcus aureus RF122 mobile element-associated protein YP_417361.1 2030752 R 273036 CDS YP_417362.1 82751621 3793049 complement(2031390..2031770) 1 NC_007622.1 mobile element-associated protein 2031770 3793049 SAB1903c Staphylococcus aureus RF122 mobile element-associated protein YP_417362.1 2031390 R 273036 CDS YP_417363.1 82751622 3793050 complement(2032079..2033788) 1 NC_007622.1 mobile element-associated protein 2033788 3793050 SAB1904c Staphylococcus aureus RF122 mobile element-associated protein YP_417363.1 2032079 R 273036 CDS YP_417364.1 82751623 3793051 complement(2033802..2034671) 1 NC_007622.1 mobile element-associated protein 2034671 3793051 SAB1905c Staphylococcus aureus RF122 mobile element-associated protein YP_417364.1 2033802 R 273036 CDS YP_417365.1 82751624 3793052 complement(2034738..2035055) 1 NC_007622.1 mobile element-associated protein 2035055 3793052 SAB1906c Staphylococcus aureus RF122 mobile element-associated protein YP_417365.1 2034738 R 273036 CDS YP_417366.1 82751625 3793053 complement(2035056..2035424) 1 NC_007622.1 hypothetical protein 2035424 3793053 SAB1907c Staphylococcus aureus RF122 hypothetical protein YP_417366.1 2035056 R 273036 CDS YP_417367.1 82751626 3793054 complement(2035417..2035629) 1 NC_007622.1 mobile element-associated protein 2035629 3793054 SAB1908c Staphylococcus aureus RF122 mobile element-associated protein YP_417367.1 2035417 R 273036 CDS YP_417368.1 82751627 3794379 complement(2035765..2036082) 1 NC_007622.1 hypothetical protein 2036082 3794379 SAB1909c Staphylococcus aureus RF122 hypothetical protein YP_417368.1 2035765 R 273036 CDS YP_417369.1 82751628 3794380 complement(2036086..2036274) 1 NC_007622.1 SaPI1 Orf21 2036274 3794380 SAB1910c Staphylococcus aureus RF122 SaPI1 Orf21 YP_417369.1 2036086 R 273036 CDS YP_417370.1 82751629 3794381 2036444..2037166 1 NC_007622.1 SaPI1 Orf22 2037166 3794381 SAB1911 Staphylococcus aureus RF122 SaPI1 Orf22 YP_417370.1 2036444 D 273036 CDS YP_417371.1 82751630 3794382 2037180..2038352 1 NC_007622.1 integrase 2038352 3794382 SAB1912 Staphylococcus aureus RF122 integrase YP_417371.1 2037180 D 273036 CDS YP_417372.1 82751631 3794233 complement(2038421..2040037) 1 NC_007622.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 2040037 groEL 3794233 groEL Staphylococcus aureus RF122 chaperonin GroEL YP_417372.1 2038421 R 273036 CDS YP_417373.1 82751632 3794234 complement(2040113..2040397) 1 NC_007622.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2040397 groES 3794234 groES Staphylococcus aureus RF122 co-chaperonin GroES YP_417373.1 2040113 R 273036 CDS YP_417374.1 82751633 3794383 2040572..2041315 1 NC_007622.1 hypothetical protein 2041315 3794383 SAB1915 Staphylococcus aureus RF122 hypothetical protein YP_417374.1 2040572 D 273036 CDS YP_417375.1 82751634 3794384 complement(2041340..2042638) 1 NC_007622.1 membrane anchored Ser-Asp rich fibrinogen-binding protein 2042638 3794384 SAB1916c Staphylococcus aureus RF122 membrane anchored Ser-Asp rich fibrinogen-binding protein YP_417375.1 2041340 R 273036 CDS YP_417376.1 82751635 3794385 2042835..2043461 1 NC_007622.1 hypothetical protein 2043461 3794385 SAB1917 Staphylococcus aureus RF122 hypothetical protein YP_417376.1 2042835 D 273036 CDS YP_417377.1 82751636 3794386 2043598..2043795 1 NC_007622.1 hypothetical protein 2043795 3794386 SAB1918 Staphylococcus aureus RF122 hypothetical protein YP_417377.1 2043598 D 273036 CDS YP_417378.1 82751637 3794387 2043839..2044624 1 NC_007622.1 hypothetical protein 2044624 3794387 SAB1919 Staphylococcus aureus RF122 hypothetical protein YP_417378.1 2043839 D 273036 CDS YP_417379.1 82751638 3794889 2045592..2046155 1 NC_007622.1 accessory gene regulator B 2046155 agrB 3794889 agrB Staphylococcus aureus RF122 accessory gene regulator B YP_417379.1 2045592 D 273036 CDS YP_417380.1 82751639 3794891 2046158..2046301 1 NC_007622.1 autoinducer peptide precursor 2046301 agrD 3794891 agrD Staphylococcus aureus RF122 autoinducer peptide precursor YP_417380.1 2046158 D 273036 CDS YP_417381.1 82751640 3794890 2046331..2047614 1 NC_007622.1 accessory gene regulator C 2047614 agrC 3794890 agrC Staphylococcus aureus RF122 accessory gene regulator C YP_417381.1 2046331 D 273036 CDS YP_417382.1 82751641 3794888 2047633..2048349 1 NC_007622.1 accessory gene regulator A 2048349 agrA 3794888 agrA Staphylococcus aureus RF122 accessory gene regulator A YP_417382.1 2047633 D 273036 CDS YP_417383.1 82751642 3794388 complement(2048716..2049675) 1 NC_007622.1 fructokinase 2049675 3794388 SAB1924c Staphylococcus aureus RF122 fructokinase YP_417383.1 2048716 R 273036 CDS YP_417384.1 82751643 3793179 complement(2049672..2051156) 1 NC_007622.1 sucrose-6-phosphate hydrolase 2051156 scrB 3793179 scrB Staphylococcus aureus RF122 sucrose-6-phosphate hydrolase YP_417384.1 2049672 R 273036 CDS YP_417385.1 82751644 3793180 complement(2051305..2052255) 1 NC_007622.1 sucrose operon repressor 2052255 scrR 3793180 scrR Staphylococcus aureus RF122 sucrose operon repressor YP_417385.1 2051305 R 273036 CDS YP_417386.1 82751645 3794389 complement(2052436..2053686) 1 NC_007622.1 ammonium transporter 2053686 3794389 SAB1927c Staphylococcus aureus RF122 ammonium transporter YP_417386.1 2052436 R 273036 CDS YP_417387.1 82751646 3794390 complement(2053895..2054119) 1 NC_007622.1 hypothetical protein 2054119 3794390 SAB1928c Staphylococcus aureus RF122 hypothetical protein YP_417387.1 2053895 R 273036 CDS YP_417388.1 82751647 3794391 complement(2054179..2055258) 1 NC_007622.1 hypothetical protein 2055258 3794391 SAB1929c Staphylococcus aureus RF122 hypothetical protein YP_417388.1 2054179 R 273036 CDS YP_417389.1 82751648 3794392 complement(2055563..2056198) 1 NC_007622.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 2056198 3794392 SAB1930c Staphylococcus aureus RF122 redox-sensing transcriptional repressor Rex YP_417389.1 2055563 R 273036 CDS YP_417390.1 82751649 3794393 2056451..2058379 1 NC_007622.1 ATP-binding ABC transporter protein 2058379 3794393 SAB1931 Staphylococcus aureus RF122 ATP-binding ABC transporter protein YP_417390.1 2056451 D 273036 CDS YP_417391.1 82751650 3794394 2058748..2060358 1 NC_007622.1 hypothetical protein 2060358 3794394 SAB1932 Staphylococcus aureus RF122 hypothetical protein YP_417391.1 2058748 D 273036 CDS YP_417392.1 82751651 3794395 2060506..2060703 1 NC_007622.1 hypothetical protein 2060703 3794395 SAB1933 Staphylococcus aureus RF122 hypothetical protein YP_417392.1 2060506 D 273036 CDS YP_417393.1 82751652 3794396 complement(2060786..2061811) 1 NC_007622.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 2061811 3794396 SAB1934c Staphylococcus aureus RF122 DNA-binding/iron metalloprotein/AP endonuclease YP_417393.1 2060786 R 273036 CDS YP_417394.1 82751653 3794397 complement(2061804..2062268) 1 NC_007622.1 ribosomal-protein-alanine acetyltransferase 2062268 3794397 SAB1935c Staphylococcus aureus RF122 ribosomal-protein-alanine acetyltransferase YP_417394.1 2061804 R 273036 CDS YP_417395.1 82751654 3794398 complement(2062241..2062903) 1 NC_007622.1 hypothetical protein 2062903 3794398 SAB1936c Staphylococcus aureus RF122 hypothetical protein YP_417395.1 2062241 R 273036 CDS YP_417396.1 82751655 3792687 complement(2062884..2063345) 1 NC_007622.1 hypothetical protein 2063345 3792687 SAB1937c Staphylococcus aureus RF122 hypothetical protein YP_417396.1 2062884 R 273036 CDS YP_417397.1 82751656 3792688 2063851..2065539 1 NC_007622.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2065539 3792688 SAB1938 Staphylococcus aureus RF122 dihydroxy-acid dehydratase YP_417397.1 2063851 D 273036 CDS YP_417398.1 82751657 3795259 2065567..2067336 1 NC_007622.1 acetolactate synthase large subunit 2067336 ilvB 3795259 ilvB Staphylococcus aureus RF122 acetolactate synthase large subunit YP_417398.1 2065567 D 273036 CDS YP_417399.1 82751658 3795261 2067336..2067590 1 NC_007622.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, this subunit subunit is required for full activity and valine sensitivity; also known as acetolactate synthase small; acetolactate synthase 1 regulatory subunit 2067590 ilvH 3795261 ilvH Staphylococcus aureus RF122 acetolactate synthase 1 regulatory subunit YP_417399.1 2067336 D 273036 CDS YP_417400.1 82751659 3795260 2067727..2068731 1 NC_007622.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2068731 ilvC 3795260 ilvC Staphylococcus aureus RF122 ketol-acid reductoisomerase YP_417400.1 2067727 D 273036 CDS YP_417401.1 82751660 3794804 2068761..2070290 1 NC_007622.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2070290 leuA 3794804 leuA Staphylococcus aureus RF122 2-isopropylmalate synthase YP_417401.1 2068761 D 273036 CDS YP_417402.1 82751661 3794805 2070293..2071339 1 NC_007622.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2071339 leuB 3794805 leuB Staphylococcus aureus RF122 3-isopropylmalate dehydrogenase YP_417402.1 2070293 D 273036 CDS YP_417403.1 82751662 3794806 2071353..2072723 1 NC_007622.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2072723 leuC 3794806 leuC Staphylococcus aureus RF122 isopropylmalate isomerase large subunit YP_417403.1 2071353 D 273036 CDS YP_417404.1 82751663 3794807 2072724..2073296 1 NC_007622.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2073296 leuD 3794807 leuD Staphylococcus aureus RF122 isopropylmalate isomerase small subunit YP_417404.1 2072724 D 273036 CDS YP_417405.1 82751664 3795258 2073311..2074579 1 NC_007622.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2074579 ilvA 3795258 ilvA Staphylococcus aureus RF122 threonine dehydratase YP_417405.1 2073311 D 273036 CDS YP_417406.1 82751665 3792689 complement(2080842..2081306) 1 NC_007622.1 hypothetical protein 2081306 3792689 SAB1947c Staphylococcus aureus RF122 hypothetical protein YP_417406.1 2080842 R 273036 CDS YP_417407.1 82751666 3792690 complement(2081290..2083440) 1 NC_007622.1 hypothetical protein 2083440 3792690 SAB1948c Staphylococcus aureus RF122 hypothetical protein YP_417407.1 2081290 R 273036 CDS YP_417408.1 82751667 3794631 complement(2083874..2084644) 1 NC_007622.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB 2084644 sigB 3794631 sigB Staphylococcus aureus RF122 RNA polymerase sigma factor SigB YP_417408.1 2083874 R 273036 CDS YP_417409.1 82751668 3795000 complement(2084619..2085098) 1 NC_007622.1 binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW 2085098 rsbW 3795000 rsbW Staphylococcus aureus RF122 serine-protein kinase RsbW YP_417409.1 2084619 R 273036 CDS YP_417410.1 82751669 3794999 complement(2085100..2085426) 1 NC_007622.1 anti-sigma B factor antagonist 2085426 rsbV 3794999 rsbV Staphylococcus aureus RF122 anti-sigma B factor antagonist YP_417410.1 2085100 R 273036 CDS YP_417411.1 82751670 3794998 complement(2085545..2086546) 1 NC_007622.1 indirect positive regulator of sigma B 2086546 rsbU 3794998 rsbU Staphylococcus aureus RF122 indirect positive regulator of sigma B YP_417411.1 2085545 R 273036 CDS YP_417412.1 82751671 3792691 complement(2086904..2087257) 1 NC_007622.1 hypothetical protein 2087257 3792691 SAB1953c Staphylococcus aureus RF122 hypothetical protein YP_417412.1 2086904 R 273036 CDS YP_417413.1 82751672 3792692 complement(2087254..2087424) 1 NC_007622.1 hypothetical protein 2087424 3792692 SAB1954c Staphylococcus aureus RF122 hypothetical protein YP_417413.1 2087254 R 273036 CDS YP_417414.1 82751673 3794899 complement(2087509..2088657) 1 NC_007622.1 alanine racemase 2088657 alr 3794899 alr Staphylococcus aureus RF122 alanine racemase YP_417414.1 2087509 R 273036 CDS YP_417415.1 82751674 3794824 complement(2088723..2089082) 1 NC_007622.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2089082 acpS 3794824 acpS Staphylococcus aureus RF122 4'-phosphopantetheinyl transferase YP_417415.1 2088723 R 273036 CDS YP_417416.1 82751675 3792693 complement(2089086..2089577) 1 NC_007622.1 hypothetical protein 2089577 3792693 SAB1957c Staphylococcus aureus RF122 hypothetical protein YP_417416.1 2089086 R 273036 CDS YP_417417.1 82751676 3792694 complement(2089570..2091147) 1 NC_007622.1 hypothetical protein 2091147 3792694 SAB1958c Staphylococcus aureus RF122 hypothetical protein YP_417417.1 2089570 R 273036 CDS YP_417418.1 82751677 3792695 complement(2091140..2091619) 1 NC_007622.1 hypothetical protein 2091619 3792695 SAB1959c Staphylococcus aureus RF122 hypothetical protein YP_417418.1 2091140 R 273036 CDS YP_417419.1 82751678 3794791 complement(2091823..2092383) 1 NC_007622.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 2092383 kdpC 3794791 kdpC Staphylococcus aureus RF122 potassium-transporting ATPase subunit C YP_417419.1 2091823 R 273036 CDS YP_417420.1 82751679 3794790 complement(2092403..2094430) 1 NC_007622.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 2094430 kdpB 3794790 kdpB Staphylococcus aureus RF122 potassium-transporting ATPase subunit B YP_417420.1 2092403 R 273036 CDS YP_417421.1 82751680 3795274 complement(2094449..2096125) 1 NC_007622.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 2096125 kdpA 3795274 kdpA Staphylococcus aureus RF122 potassium-transporting ATPase subunit A YP_417421.1 2094449 R 273036 CDS YP_417422.1 82751681 3794792 2096397..2099054 1 NC_007622.1 two component sensor protein 2099054 kdpD 3794792 kdpD Staphylococcus aureus RF122 two component sensor protein YP_417422.1 2096397 D 273036 CDS YP_417423.1 82751682 3794793 2099054..2099749 1 NC_007622.1 two component sensor protein 2099749 kdpE 3794793 kdpE Staphylococcus aureus RF122 two component sensor protein YP_417423.1 2099054 D 273036 CDS YP_417424.1 82751683 3792696 complement(2100100..2101620) 1 NC_007622.1 ATP-dependent RNA helicase 2101620 3792696 SAB1965c Staphylococcus aureus RF122 ATP-dependent RNA helicase YP_417424.1 2100100 R 273036 CDS YP_417425.1 82751684 3792697 complement(2102137..2103495) 1 NC_007622.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanine ligase 2103495 3792697 SAB1966c Staphylococcus aureus RF122 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanine ligase YP_417425.1 2102137 R 273036 CDS YP_417426.1 82751685 3792698 complement(2103510..2104580) 1 NC_007622.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 2104580 ddl 3792698 ddl Staphylococcus aureus RF122 D-alanyl-alanine synthetase A YP_417426.1 2103510 R 273036 CDS YP_417427.1 82751686 3792699 2104898..2106100 1 NC_007622.1 hypothetical protein 2106100 3792699 SAB1968 Staphylococcus aureus RF122 hypothetical protein YP_417427.1 2104898 D 273036 CDS YP_417428.1 82751687 3792700 complement(2106364..2106501) 1 NC_007622.1 hypothetical protein 2106501 3792700 SAB1969c Staphylococcus aureus RF122 hypothetical protein YP_417428.1 2106364 R 273036 CDS YP_417429.1 82751688 3792701 complement(2106629..2106838) 1 NC_007622.1 hypothetical protein 2106838 3792701 SAB1970c Staphylococcus aureus RF122 hypothetical protein YP_417429.1 2106629 R 273036 CDS YP_417430.1 82751689 3792702 complement(2106850..2107143) 1 NC_007622.1 hypothetical protein 2107143 3792702 SAB1971c Staphylococcus aureus RF122 hypothetical protein YP_417430.1 2106850 R 273036 CDS YP_417431.1 82751690 3792703 2107309..2108793 1 NC_007622.1 cardiolipin synthetase 2108793 3792703 SAB1972 Staphylococcus aureus RF122 cardiolipin synthetase YP_417431.1 2107309 D 273036 CDS YP_417432.1 82751691 3792704 2108821..2109468 1 NC_007622.1 hypothetical protein 2109468 3792704 SAB1973 Staphylococcus aureus RF122 hypothetical protein YP_417432.1 2108821 D 273036 CDS YP_417433.1 82751692 3792705 complement(2110132..2111004) 1 NC_007622.1 membrane-embedded lipoprotein precursor 2111004 3792705 SAB1974c Staphylococcus aureus RF122 membrane-embedded lipoprotein precursor YP_417433.1 2110132 R 273036 CDS YP_417434.1 82751693 3794324 complement(2111090..2111731) 1 NC_007622.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 2111731 thiE 3794324 thiE Staphylococcus aureus RF122 thiamine-phosphate pyrophosphorylase YP_417434.1 2111090 R 273036 CDS YP_417435.1 82751694 3794325 complement(2111733..2112524) 1 NC_007622.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 2112524 thiM 3794325 thiM Staphylococcus aureus RF122 hydroxyethylthiazole kinase YP_417435.1 2111733 R 273036 CDS YP_417436.1 82751695 3793326 complement(2113330..2114019) 1 NC_007622.1 transcriptional activator 2114019 tenA 3793326 tenA Staphylococcus aureus RF122 transcriptional activator YP_417436.1 2113330 R 273036 CDS YP_417437.1 82751696 3792822 2114282..2114554 1 NC_007622.1 hypothetical protein 2114554 3792822 SAB1979 Staphylococcus aureus RF122 hypothetical protein YP_417437.1 2114282 D 273036 CDS YP_417438.1 82751697 3792823 complement(2114544..2115239) 1 NC_007622.1 hypothetical protein 2115239 3792823 SAB1980c Staphylococcus aureus RF122 hypothetical protein YP_417438.1 2114544 R 273036 CDS YP_417439.1 82751698 3792824 complement(2115628..2116023) 1 NC_007622.1 single strand DNA binding protein 2116023 3792824 SAB1981c Staphylococcus aureus RF122 single strand DNA binding protein YP_417439.1 2115628 R 273036 CDS YP_417440.1 82751699 3792825 2116154..2116657 1 NC_007622.1 hypothetical protein 2116657 3792825 SAB1982 Staphylococcus aureus RF122 hypothetical protein YP_417440.1 2116154 D 273036 CDS YP_417441.1 82751700 3793363 complement(2116714..2117154) 1 NC_007622.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2117154 fabZ 3793363 fabZ Staphylococcus aureus RF122 (3R)-hydroxymyristoyl-ACP dehydratase YP_417441.1 2116714 R 273036 CDS YP_417442.1 82751701 3794126 complement(2117188..2118453) 1 NC_007622.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2118453 murA1 3794126 murA1 Staphylococcus aureus RF122 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_417442.1 2117188 R 273036 CDS YP_417443.1 82751702 3792826 complement(2118564..2118797) 1 NC_007622.1 hypothetical protein 2118797 3792826 SAB1985c Staphylococcus aureus RF122 hypothetical protein YP_417443.1 2118564 R 273036 CDS YP_417444.1 82751703 3792649 complement(2119321..2119725) 1 NC_007622.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 2119725 atpC 3792649 atpC Staphylococcus aureus RF122 F0F1 ATP synthase subunit epsilon YP_417444.1 2119321 R 273036 CDS YP_417445.1 82751704 3792650 complement(2119745..2121157) 1 NC_007622.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 2121157 atpD 3792650 atpD Staphylococcus aureus RF122 F0F1 ATP synthase subunit beta YP_417445.1 2119745 R 273036 CDS YP_417446.1 82751705 3792653 complement(2121179..2122045) 1 NC_007622.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2122045 atpG 3792653 atpG Staphylococcus aureus RF122 F0F1 ATP synthase subunit gamma YP_417446.1 2121179 R 273036 CDS YP_417447.1 82751706 3794962 complement(2122076..2123584) 1 NC_007622.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2123584 atpA 3794962 atpA Staphylococcus aureus RF122 F0F1 ATP synthase subunit alpha YP_417447.1 2122076 R 273036 CDS YP_417448.1 82751707 3792654 complement(2123606..2124145) 1 NC_007622.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 2124145 atpH 3792654 atpH Staphylococcus aureus RF122 F0F1 ATP synthase subunit delta YP_417448.1 2123606 R 273036 CDS YP_417449.1 82751708 3792652 complement(2124145..2124666) 1 NC_007622.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B 2124666 atpF 3792652 atpF Staphylococcus aureus RF122 F0F1 ATP synthase subunit B YP_417449.1 2124145 R 273036 CDS YP_417450.1 82751709 3792651 complement(2124864..2125076) 1 NC_007622.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 2125076 atpE 3792651 atpE Staphylococcus aureus RF122 F0F1 ATP synthase subunit C YP_417450.1 2124864 R 273036 CDS YP_417451.1 82751710 3794963 complement(2125119..2125847) 1 NC_007622.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 2125847 atpB 3794963 atpB Staphylococcus aureus RF122 F0F1 ATP synthase subunit A YP_417451.1 2125119 R 273036 CDS YP_417452.1 82751711 3792655 complement(2125868..2126221) 1 NC_007622.1 hypothetical protein 2126221 atpI 3792655 atpI Staphylococcus aureus RF122 hypothetical protein YP_417452.1 2125868 R 273036 CDS YP_417453.1 82751712 3792981 complement(2126388..2127518) 1 NC_007622.1 UDP-GlcNAc 2-epimerase 2127518 mnaA 3792981 mnaA Staphylococcus aureus RF122 UDP-GlcNAc 2-epimerase YP_417453.1 2126388 R 273036 CDS YP_417454.1 82751713 3795136 complement(2127539..2128168) 1 NC_007622.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2128168 upp 3795136 upp Staphylococcus aureus RF122 uracil phosphoribosyltransferase YP_417454.1 2127539 R 273036 CDS YP_417455.1 82751714 3794222 complement(2128196..2129434) 1 NC_007622.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2129434 glyA 3794222 glyA Staphylococcus aureus RF122 serine hydroxymethyltransferase YP_417455.1 2128196 R 273036 CDS YP_417456.1 82751715 3792827 complement(2129461..2129985) 1 NC_007622.1 hypothetical protein 2129985 3792827 SAB1998c Staphylococcus aureus RF122 hypothetical protein YP_417456.1 2129461 R 273036 CDS YP_417457.1 82751716 3792828 complement(2130092..2130511) 1 NC_007622.1 hypothetical protein 2130511 3792828 SAB1999c Staphylococcus aureus RF122 hypothetical protein YP_417457.1 2130092 R 273036 CDS YP_417458.1 82751717 3792829 complement(2130508..2131554) 1 NC_007622.1 hypothetical protein 2131554 3792829 SAB2000c Staphylococcus aureus RF122 hypothetical protein YP_417458.1 2130508 R 273036 CDS YP_417459.1 82751718 3792830 complement(2131638..2132474) 1 NC_007622.1 hypothetical protein 2132474 3792830 SAB2001c Staphylococcus aureus RF122 hypothetical protein YP_417459.1 2131638 R 273036 CDS YP_417460.1 82751719 3794030 complement(2132461..2133537) 1 NC_007622.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2133537 prfA 3794030 prfA Staphylococcus aureus RF122 peptide chain release factor 1 YP_417460.1 2132461 R 273036 CDS YP_417461.1 82751720 3792831 complement(2133538..2134137) 1 NC_007622.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2134137 3792831 SAB2003c Staphylococcus aureus RF122 thymidine kinase YP_417461.1 2133538 R 273036 CDS YP_417462.1 82751721 3792920 complement(2134484..2134738) 1 NC_007622.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 2134738 rpmE2 3792920 rpmE2 Staphylococcus aureus RF122 50S ribosomal protein L31 type B YP_417462.1 2134484 R 273036 CDS YP_417463.1 82751722 3794278 complement(2134856..2136172) 1 NC_007622.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2136172 rho 3794278 rho Staphylococcus aureus RF122 transcription termination factor Rho YP_417463.1 2134856 R 273036 CDS YP_417464.1 82751723 3792832 complement(2136419..2137846) 1 NC_007622.1 aldehyde dehydrogenase 2137846 3792832 SAB2006c Staphylococcus aureus RF122 aldehyde dehydrogenase YP_417464.1 2136419 R 273036 CDS YP_417465.1 82751724 3792833 complement(2138085..2138423) 1 NC_007622.1 hypothetical protein 2138423 3792833 SAB2007c Staphylococcus aureus RF122 hypothetical protein YP_417465.1 2138085 R 273036 CDS YP_417466.1 82751725 3794127 complement(2138509..2139768) 1 NC_007622.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2139768 murA2 3794127 murA2 Staphylococcus aureus RF122 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_417466.1 2138509 R 273036 CDS YP_417467.1 82751726 3792834 complement(2140234..2141094) 1 NC_007622.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; fructose-bisphosphate aldolase 2141094 3792834 SAB2009c Staphylococcus aureus RF122 fructose-bisphosphate aldolase YP_417467.1 2140234 R 273036 CDS YP_417468.1 82751727 3792835 2141312..2141833 1 NC_007622.1 hypothetical protein 2141833 3792835 SAB2010 Staphylococcus aureus RF122 hypothetical protein YP_417468.1 2141312 D 273036 CDS YP_417469.1 82751728 3794261 complement(2141942..2143552) 1 NC_007622.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2143552 pyrG 3794261 pyrG Staphylococcus aureus RF122 CTP synthetase YP_417469.1 2141942 R 273036 CDS YP_417470.1 82751729 3792931 complement(2143888..2144418) 1 NC_007622.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 2144418 rpoE 3792931 rpoE Staphylococcus aureus RF122 DNA-directed RNA polymerase subunit delta YP_417470.1 2143888 R 273036 CDS YP_417471.1 82751730 3792836 complement(2144530..2145390) 1 NC_007622.1 hypothetical protein 2145390 3792836 SAB2013c Staphylococcus aureus RF122 hypothetical protein YP_417471.1 2144530 R 273036 CDS YP_417472.1 82751731 3792837 2145815..2146618 1 NC_007622.1 catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A; pantothenate kinase 2146618 3792837 SAB2014 Staphylococcus aureus RF122 pantothenate kinase YP_417472.1 2145815 D 273036 CDS YP_417473.1 82751732 3792838 complement(2146748..2147419) 1 NC_007622.1 hypothetical protein 2147419 3792838 SAB2015c Staphylococcus aureus RF122 hypothetical protein YP_417473.1 2146748 R 273036 CDS YP_417474.1 82751733 3792839 complement(2147818..2149011) 1 NC_007622.1 hypothetical protein 2149011 3792839 SAB2016c Staphylococcus aureus RF122 hypothetical protein YP_417474.1 2147818 R 273036 CDS YP_417475.1 82751734 3792840 complement(2149011..2150195) 1 NC_007622.1 amidase 2150195 3792840 SAB2017c Staphylococcus aureus RF122 amidase YP_417475.1 2149011 R 273036 CDS YP_417476.1 82751735 3794760 2150506..2150976 1 NC_007622.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 2150976 luxS 3794760 luxS Staphylococcus aureus RF122 S-ribosylhomocysteinase YP_417476.1 2150506 D 273036 CDS YP_417477.1 82751736 3792841 complement(2151128..2151478) 1 NC_007622.1 hypothetical protein 2151478 3792841 SAB2019c Staphylococcus aureus RF122 hypothetical protein YP_417477.1 2151128 R 273036 CDS YP_417478.1 82751737 3794685 complement(2151492..2152793) 1 NC_007622.1 Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway; pyrimidine-nucleoside phosphorylase 2152793 pyn 3794685 pyn Staphylococcus aureus RF122 pyrimidine-nucleoside phosphorylase YP_417478.1 2151492 R 273036 CDS YP_417479.1 82751738 3794478 complement(2153073..2153735) 1 NC_007622.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 2153735 deoC2 3794478 deoC2 Staphylococcus aureus RF122 deoxyribose-phosphate aldolase YP_417479.1 2153073 R 273036 CDS YP_417480.1 82751739 3794480 2154049..2154759 1 NC_007622.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 2154759 deoD 3794480 deoD Staphylococcus aureus RF122 purine nucleoside phosphorylase YP_417480.1 2154049 D 273036 CDS YP_417481.1 82751740 3793699 complement(2154880..2155323) 1 NC_007622.1 general stress protein 20U 2155323 3793699 SAB2023c Staphylococcus aureus RF122 general stress protein 20U YP_417481.1 2154880 R 273036 CDS YP_417482.1 82751741 3793700 complement(2155523..2155936) 1 NC_007622.1 hypothetical protein 2155936 3793700 SAB2024c Staphylococcus aureus RF122 hypothetical protein YP_417482.1 2155523 R 273036 CDS YP_417483.1 82751742 3793701 complement(2156394..2157767) 1 NC_007622.1 hypothetical protein 2157767 3793701 SAB2025c Staphylococcus aureus RF122 hypothetical protein YP_417483.1 2156394 R 273036 CDS YP_417484.1 82751743 3793702 complement(2158441..2158671) 1 NC_007622.1 hypothetical protein 2158671 3793702 SAB2026c Staphylococcus aureus RF122 hypothetical protein YP_417484.1 2158441 R 273036 CDS YP_417485.1 82751744 3793703 complement(2158702..2159640) 1 NC_007622.1 mannose-6-phosphate isomerase 2159640 3793703 SAB2027c Staphylococcus aureus RF122 mannose-6-phosphate isomerase YP_417485.1 2158702 R 273036 CDS YP_417486.1 82751745 3793704 complement(2160076..2160741) 1 NC_007622.1 hypothetical protein 2160741 3793704 SAB2028c Staphylococcus aureus RF122 hypothetical protein YP_417486.1 2160076 R 273036 CDS YP_417487.1 82751746 3795287 2160893..2161213 1 NC_007622.1 zinc and cobalt transport repressor protein 2161213 czrA 3795287 czrA Staphylococcus aureus RF122 zinc and cobalt transport repressor protein YP_417487.1 2160893 D 273036 CDS YP_417488.1 82751747 3795288 2161215..2162195 1 NC_007622.1 cation-efflux system membrane protein 2162195 czrB 3795288 czrB Staphylococcus aureus RF122 cation-efflux system membrane protein YP_417488.1 2161215 D 273036 CDS YP_417489.1 82751748 3793705 2162460..2163515 1 NC_007622.1 membrane-embedded lytic regulatory protein 2163515 3793705 SAB2031 Staphylococcus aureus RF122 membrane-embedded lytic regulatory protein YP_417489.1 2162460 D 273036 CDS YP_417490.1 82751749 3793706 complement(2164066..2164923) 1 NC_007622.1 hypothetical protein 2164923 3793706 SAB2032c Staphylococcus aureus RF122 hypothetical protein YP_417490.1 2164066 R 273036 CDS YP_417491.1 82751750 3793707 complement(2164991..2165773) 1 NC_007622.1 ABC transporter ATP-binding protein 2165773 3793707 SAB2033c Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_417491.1 2164991 R 273036 CDS YP_417492.1 82751751 3793646 complement(2166005..2167810) 1 NC_007622.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 2167810 glmS 3793646 glmS Staphylococcus aureus RF122 glucosamine--fructose-6-phosphate aminotransferase YP_417492.1 2166005 R 273036 CDS YP_417493.1 82751752 3793708 2168260..2168433 1 NC_007622.1 hypothetical protein 2168433 3793708 SAB2035 Staphylococcus aureus RF122 hypothetical protein YP_417493.1 2168260 D 273036 CDS YP_417494.1 82751753 3793463 2168491..2170029 1 NC_007622.1 PTS system mannitol-specific IIBC component 2170029 mtlA 3793463 mtlA Staphylococcus aureus RF122 PTS system mannitol-specific IIBC component YP_417494.1 2168491 D 273036 CDS YP_417495.1 82751754 3793709 2170064..2172196 1 NC_007622.1 transcription antiterminator 2172196 3793709 SAB2037 Staphylococcus aureus RF122 transcription antiterminator YP_417495.1 2170064 D 273036 CDS YP_417496.1 82751755 3794125 2172208..2172642 1 NC_007622.1 PTS system mannitol-specific IIA component 2172642 mtlF 3794125 mtlF Staphylococcus aureus RF122 PTS system mannitol-specific IIA component YP_417496.1 2172208 D 273036 CDS YP_417497.1 82751756 3793464 2172642..2173748 1 NC_007622.1 mannitol-1-phosphate 5-dehydrogenase 2173748 mtlD 3793464 mtlD Staphylococcus aureus RF122 mannitol-1-phosphate 5-dehydrogenase YP_417497.1 2172642 D 273036 CDS YP_417498.1 82751757 3794744 complement(2174067..2180000) 1 NC_007622.1 truncated methicillin resistance-related surface protein 2180000 fmtB 3794744 fmtB Staphylococcus aureus RF122 truncated methicillin resistance-related surface protein YP_417498.1 2174067 R 273036 CDS YP_417499.1 82751758 3793710 complement(2180278..2181633) 1 NC_007622.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 2181633 glmM 3793710 glmM Staphylococcus aureus RF122 phosphoglucosamine mutase YP_417499.1 2180278 R 273036 CDS YP_417500.1 82751759 3793711 complement(2181660..2182592) 1 NC_007622.1 hypothetical protein 2182592 3793711 SAB2042c Staphylococcus aureus RF122 hypothetical protein YP_417500.1 2181660 R 273036 CDS YP_417501.1 82751760 3793712 complement(2182594..2183403) 1 NC_007622.1 hypothetical protein 2183403 3793712 SAB2043c Staphylococcus aureus RF122 hypothetical protein YP_417501.1 2182594 R 273036 CDS YP_417502.1 82751761 3793105 complement(2183592..2184500) 1 NC_007622.1 arginase 2184500 rocF 3793105 rocF Staphylococcus aureus RF122 arginase YP_417502.1 2183592 R 273036 CDS YP_417503.1 82751762 3793713 complement(2184629..2185453) 1 NC_007622.1 transposase 2185453 3793713 SAB2045c Staphylococcus aureus RF122 transposase YP_417503.1 2184629 R 273036 CDS YP_417504.1 82751763 3793714 complement(2185450..2185950) 1 NC_007622.1 transposase 2185950 3793714 SAB2046c Staphylococcus aureus RF122 transposase YP_417504.1 2185450 R 273036 CDS YP_417505.1 82751764 3793715 complement(2192150..2193214) 1 NC_007622.1 multidrug resistance protein 2193214 3793715 SAB2047c Staphylococcus aureus RF122 multidrug resistance protein YP_417505.1 2192150 R 273036 CDS YP_417506.1 82751765 3793716 complement(2193362..2194807) 1 NC_007622.1 multidrug resistance protein 2194807 3793716 SAB2048c Staphylococcus aureus RF122 multidrug resistance protein YP_417506.1 2193362 R 273036 CDS YP_417507.1 82751766 3793717 complement(2195127..2195600) 1 NC_007622.1 hypothetical protein 2195600 3793717 SAB2049c Staphylococcus aureus RF122 hypothetical protein YP_417507.1 2195127 R 273036 CDS YP_417508.1 82751767 3794281 complement(2195699..2197042) 1 NC_007622.1 drug resistance-involved transporter 2197042 3794281 SAB2050c Staphylococcus aureus RF122 drug resistance-involved transporter YP_417508.1 2195699 R 273036 CDS YP_417509.1 82751768 3794282 complement(2197215..2197901) 1 NC_007622.1 hemolysin 2197901 3794282 SAB2051c Staphylococcus aureus RF122 hemolysin YP_417509.1 2197215 R 273036 CDS YP_417510.1 82751769 3794283 complement(2197917..2199104) 1 NC_007622.1 hypothetical protein 2199104 3794283 SAB2052c Staphylococcus aureus RF122 hypothetical protein YP_417510.1 2197917 R 273036 CDS YP_417511.1 82751770 3794284 complement(2199148..2199663) 1 NC_007622.1 hypothetical protein 2199663 3794284 SAB2053c Staphylococcus aureus RF122 hypothetical protein YP_417511.1 2199148 R 273036 CDS YP_417512.1 82751771 3794285 2199841..2200101 1 NC_007622.1 hypothetical protein 2200101 3794285 SAB2054 Staphylococcus aureus RF122 hypothetical protein YP_417512.1 2199841 D 273036 CDS YP_417513.1 82751772 3794286 complement(2200233..2201603) 1 NC_007622.1 hypothetical protein 2201603 3794286 SAB2055c Staphylococcus aureus RF122 hypothetical protein YP_417513.1 2200233 R 273036 CDS YP_417514.1 82751773 3794287 complement(2201838..2202806) 1 NC_007622.1 ferrichrome ABC transporter 2202806 3794287 SAB2056c Staphylococcus aureus RF122 ferrichrome ABC transporter YP_417514.1 2201838 R 273036 CDS YP_417515.1 82751774 3794288 complement(2202803..2203834) 1 NC_007622.1 ferrichrome ABC transporter 2203834 3794288 SAB2057c Staphylococcus aureus RF122 ferrichrome ABC transporter YP_417515.1 2202803 R 273036 CDS YP_417516.1 82751775 3794289 complement(2203846..2204859) 1 NC_007622.1 ferrichrome ABC transporter lipoprotein 2204859 3794289 SAB2058c Staphylococcus aureus RF122 ferrichrome ABC transporter lipoprotein YP_417516.1 2203846 R 273036 CDS YP_417517.1 82751776 3794290 complement(2205222..2206292) 1 NC_007622.1 hypothetical protein 2206292 3794290 SAB2059c Staphylococcus aureus RF122 hypothetical protein YP_417517.1 2205222 R 273036 CDS YP_417518.1 82751777 3794291 complement(2206299..2208056) 1 NC_007622.1 hypothetical protein 2208056 3794291 SAB2060c Staphylococcus aureus RF122 hypothetical protein YP_417518.1 2206299 R 273036 CDS YP_417519.1 82751778 3794292 complement(2208043..2209236) 1 NC_007622.1 membrane transporter 2209236 3794292 SAB2061c Staphylococcus aureus RF122 membrane transporter YP_417519.1 2208043 R 273036 CDS YP_417520.1 82751779 3794293 2209338..2211314 1 NC_007622.1 hypothetical protein 2211314 3794293 SAB2062 Staphylococcus aureus RF122 hypothetical protein YP_417520.1 2209338 D 273036 CDS YP_417521.1 82751780 3794959 complement(2211474..2211983) 1 NC_007622.1 alkaline shock protein 23 2211983 asp23 3794959 asp23 Staphylococcus aureus RF122 alkaline shock protein 23 YP_417521.1 2211474 R 273036 CDS YP_417522.1 82751781 3794294 complement(2212046..2212285) 1 NC_007622.1 hypothetical protein 2212285 3794294 SAB2064c Staphylococcus aureus RF122 hypothetical protein YP_417522.1 2212046 R 273036 CDS YP_417523.1 82751782 3794295 complement(2212298..2212894) 1 NC_007622.1 hypothetical protein 2212894 3794295 SAB2065c Staphylococcus aureus RF122 hypothetical protein YP_417523.1 2212298 R 273036 CDS YP_417524.1 82751783 3794112 complement(2213008..2214570) 1 NC_007622.1 glycine betaine transporter 2214570 opuD 3794112 opuD Staphylococcus aureus RF122 glycine betaine transporter YP_417524.1 2213008 R 273036 CDS YP_417525.1 82751784 3794296 complement(2214877..2215884) 1 NC_007622.1 hypothetical protein 2215884 3794296 SAB2067c Staphylococcus aureus RF122 hypothetical protein YP_417525.1 2214877 R 273036 CDS YP_417526.1 82751785 3794297 complement(2216116..2217120) 1 NC_007622.1 quinone oxidoreductase 2217120 3794297 SAB2068c Staphylococcus aureus RF122 quinone oxidoreductase YP_417526.1 2216116 R 273036 CDS YP_417527.1 82751786 3794298 complement(2217399..2218283) 1 NC_007622.1 hypothetical protein 2218283 3794298 SAB2069c Staphylococcus aureus RF122 hypothetical protein YP_417527.1 2217399 R 273036 CDS YP_417528.1 82751787 3794800 complement(2218534..2219946) 1 NC_007622.1 catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside; 6-phospho-beta-galactosidase 2219946 lacG 3794800 lacG Staphylococcus aureus RF122 6-phospho-beta-galactosidase YP_417528.1 2218534 R 273036 CDS YP_417529.1 82751788 3794798 complement(2219964..2221676) 1 NC_007622.1 PTS system lactose-specific IIBC component 2221676 lacE 3794798 lacE Staphylococcus aureus RF122 PTS system lactose-specific IIBC component YP_417529.1 2219964 R 273036 CDS YP_417530.1 82751789 3794799 complement(2221682..2221993) 1 NC_007622.1 PTS system, lactose-specific IIA component 2221993 lacF 3794799 lacF Staphylococcus aureus RF122 PTS system, lactose-specific IIA component YP_417530.1 2221682 R 273036 CDS YP_417531.1 82751790 3794797 complement(2222015..2222995) 1 NC_007622.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase 2222995 lacD 3794797 lacD Staphylococcus aureus RF122 tagatose 1,6-diphosphate aldolase YP_417531.1 2222015 R 273036 CDS YP_417532.1 82751791 3794796 complement(2222999..2223931) 1 NC_007622.1 catalyzes the formation of tagatose 1,6-bisphosphate from tagatose 6-phosphate and ATP; tagatose-6-phosphate kinase 2223931 lacC 3794796 lacC Staphylococcus aureus RF122 tagatose-6-phosphate kinase YP_417532.1 2222999 R 273036 CDS YP_417533.1 82751792 3794795 complement(2223944..2224459) 1 NC_007622.1 catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate; galactose-6-phosphate isomerase subunit LacB 2224459 lacB 3794795 lacB Staphylococcus aureus RF122 galactose-6-phosphate isomerase subunit LacB YP_417533.1 2223944 R 273036 CDS YP_417534.1 82751793 3794794 complement(2224476..2224904) 1 NC_007622.1 catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate; tagatose pathway for galactose utilization; galactose-6-phosphate isomerase subunit LacA 2224904 lacA 3794794 lacA Staphylococcus aureus RF122 galactose-6-phosphate isomerase subunit LacA YP_417534.1 2224476 R 273036 CDS YP_417535.1 82751794 3794801 complement(2225271..2226026) 1 NC_007622.1 lactose phosphotransferase system repressor 2226026 lacR 3794801 lacR Staphylococcus aureus RF122 lactose phosphotransferase system repressor YP_417535.1 2225271 R 273036 CDS YP_417536.1 82751795 3794299 2226277..2227008 1 NC_007622.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2227008 3794299 SAB2078 Staphylococcus aureus RF122 NAD-dependent deacetylase YP_417536.1 2226277 D 273036 CDS YP_417537.1 82751796 3794300 complement(2227462..2227932) 1 NC_007622.1 hypothetical protein 2227932 3794300 SAB2079c Staphylococcus aureus RF122 hypothetical protein YP_417537.1 2227462 R 273036 CDS YP_417538.1 82751797 3794496 complement(2228539..2229387) 1 NC_007622.1 oxidoreductase 2229387 3794496 SAB2080c Staphylococcus aureus RF122 oxidoreductase YP_417538.1 2228539 R 273036 CDS YP_417539.1 82751798 3794497 complement(2229607..2229873) 1 NC_007622.1 MerR family transcriptional regulator 2229873 3794497 SAB2081c Staphylococcus aureus RF122 MerR family transcriptional regulator YP_417539.1 2229607 R 273036 CDS YP_417540.1 82751799 3794100 2230263..2232692 1 NC_007622.1 hyaluronate lyase 2232692 hysA2 3794100 hysA2 Staphylococcus aureus RF122 hyaluronate lyase YP_417540.1 2230263 D 273036 CDS YP_417541.1 82751800 3794498 complement(2232866..2233795) 1 NC_007622.1 transcriptional regulator 2233795 3794498 SAB2083c Staphylococcus aureus RF122 transcriptional regulator YP_417541.1 2232866 R 273036 CDS YP_417542.1 82751801 3794499 2233832..2234521 1 NC_007622.1 hypothetical protein 2234521 3794499 SAB2084 Staphylococcus aureus RF122 hypothetical protein YP_417542.1 2233832 D 273036 CDS YP_417543.1 82751802 3794500 2234708..2235133 1 NC_007622.1 hypothetical protein 2235133 3794500 SAB2085 Staphylococcus aureus RF122 hypothetical protein YP_417543.1 2234708 D 273036 CDS YP_417544.1 82751803 3794501 complement(2235509..2236213) 1 NC_007622.1 alpha-acetolactate decarboxylase 2236213 3794501 SAB2086c Staphylococcus aureus RF122 alpha-acetolactate decarboxylase YP_417544.1 2235509 R 273036 CDS YP_417545.1 82751804 3794502 complement(2236250..2237914) 1 NC_007622.1 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 2237914 3794502 SAB2087c Staphylococcus aureus RF122 acetolactate synthase YP_417545.1 2236250 R 273036 CDS YP_417546.1 82751805 3794503 2238209..2238361 1 NC_007622.1 hypothetical protein 2238361 3794503 SAB2088 Staphylococcus aureus RF122 hypothetical protein YP_417546.1 2238209 D 273036 CDS YP_417547.1 82751806 3794504 complement(2239118..2239297) 1 NC_007622.1 hypothetical protein 2239297 3794504 SAB2089c Staphylococcus aureus RF122 hypothetical protein YP_417547.1 2239118 R 273036 CDS YP_417548.1 82751807 3794984 complement(2239799..2240197) 1 NC_007622.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 2240197 rpsI 3794984 rpsI Staphylococcus aureus RF122 30S ribosomal protein S9 YP_417548.1 2239799 R 273036 CDS YP_417549.1 82751808 3795086 complement(2240211..2240648) 1 NC_007622.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2240648 rplM 3795086 rplM Staphylococcus aureus RF122 50S ribosomal protein L13 YP_417549.1 2240211 R 273036 CDS YP_417550.1 82751809 3794505 complement(2240887..2241690) 1 NC_007622.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2241690 truA 3794505 truA Staphylococcus aureus RF122 tRNA pseudouridine synthase A YP_417550.1 2240887 R 273036 CDS YP_417551.1 82751810 3794506 complement(2241695..2242501) 1 NC_007622.1 cobalt ABC transporter permease 2242501 3794506 SAB2093c Staphylococcus aureus RF122 cobalt ABC transporter permease YP_417551.1 2241695 R 273036 CDS YP_417552.1 82751811 3794507 complement(2242491..2243351) 1 NC_007622.1 with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene; cobalt transporter ATP-binding subunit 2243351 cbiO 3794507 cbiO Staphylococcus aureus RF122 cobalt transporter ATP-binding subunit YP_417552.1 2242491 R 273036 CDS YP_417553.1 82751812 3794508 complement(2243348..2244268) 1 NC_007622.1 with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene; cobalt transporter ATP-binding subunit 2244268 cbiO 3794508 cbiO Staphylococcus aureus RF122 cobalt transporter ATP-binding subunit YP_417553.1 2243348 R 273036 CDS YP_417554.1 82751813 3795090 complement(2244694..2245062) 1 NC_007622.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 2245062 rplQ 3795090 rplQ Staphylococcus aureus RF122 50S ribosomal protein L17 YP_417554.1 2244694 R 273036 CDS YP_417555.1 82751814 3792927 complement(2245079..2246023) 1 NC_007622.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 2246023 rpoA 3792927 rpoA Staphylococcus aureus RF122 DNA-directed RNA polymerase subunit alpha YP_417555.1 2245079 R 273036 CDS YP_417556.1 82751815 3794986 complement(2246098..2246487) 1 NC_007622.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 2246487 rpsK 3794986 rpsK Staphylococcus aureus RF122 30S ribosomal protein S11 YP_417556.1 2246098 R 273036 CDS YP_417557.1 82751816 3794988 complement(2246511..2246876) 1 NC_007622.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 2246876 rpsM 3794988 rpsM Staphylococcus aureus RF122 30S ribosomal protein S13 YP_417557.1 2246511 R 273036 CDS YP_417558.1 82751817 3795262 complement(2247044..2247262) 1 NC_007622.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2247262 infA 3795262 infA Staphylococcus aureus RF122 translation initiation factor IF-1 YP_417558.1 2247044 R 273036 CDS YP_417559.1 82751818 3794887 complement(2247455..2248102) 1 NC_007622.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2248102 adk 3794887 adk Staphylococcus aureus RF122 adenylate kinase YP_417559.1 2247455 R 273036 CDS YP_417560.1 82751819 3793188 complement(2248119..2249411) 1 NC_007622.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 2249411 secY 3793188 secY Staphylococcus aureus RF122 preprotein translocase subunit SecY YP_417560.1 2248119 R 273036 CDS YP_417561.1 82751820 3795088 complement(2249411..2249851) 1 NC_007622.1 late assembly protein; 50S ribosomal protein L15 2249851 rplO 3795088 rplO Staphylococcus aureus RF122 50S ribosomal protein L15 YP_417561.1 2249411 R 273036 CDS YP_417562.1 82751821 3795101 complement(2249868..2250047) 1 NC_007622.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 2250047 rpmD 3795101 rpmD Staphylococcus aureus RF122 50S ribosomal protein L30 YP_417562.1 2249868 R 273036 CDS YP_417563.1 82751822 3792936 complement(2250064..2250564) 1 NC_007622.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 2250564 rpsE 3792936 rpsE Staphylococcus aureus RF122 30S ribosomal protein S5 YP_417563.1 2250064 R 273036 CDS YP_417564.1 82751823 3795091 complement(2250585..2250944) 1 NC_007622.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 2250944 rplR 3795091 rplR Staphylococcus aureus RF122 50S ribosomal protein L18 YP_417564.1 2250585 R 273036 CDS YP_417565.1 82751824 3793112 complement(2250975..2251511) 1 NC_007622.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 2251511 rplF 3793112 rplF Staphylococcus aureus RF122 50S ribosomal protein L6 YP_417565.1 2250975 R 273036 CDS YP_417566.1 82751825 3794983 complement(2251536..2251934) 1 NC_007622.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 2251934 rpsH 3794983 rpsH Staphylococcus aureus RF122 30S ribosomal protein S8 YP_417566.1 2251536 R 273036 CDS YP_417567.2 161777617 3794990 complement(2251966..2252151) 1 NC_007622.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 2252151 rpsN 3794990 rpsN Staphylococcus aureus RF122 30S ribosomal protein S14 YP_417567.2 2251966 R 273036 CDS YP_417568.1 82751827 3793111 complement(2252174..2252713) 1 NC_007622.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 2252713 rplE 3793111 rplE Staphylococcus aureus RF122 50S ribosomal protein L5 YP_417568.1 2252174 R 273036 CDS YP_417569.1 82751828 3795097 complement(2252740..2253057) 1 NC_007622.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 2253057 rplX 3795097 rplX Staphylococcus aureus RF122 50S ribosomal protein L24 YP_417569.1 2252740 R 273036 CDS YP_417570.1 82751829 3795087 complement(2253093..2253461) 1 NC_007622.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 2253461 rplN 3795087 rplN Staphylococcus aureus RF122 50S ribosomal protein L14 YP_417570.1 2253093 R 273036 CDS YP_417571.1 82751830 3794993 complement(2253493..2253756) 1 NC_007622.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 2253756 rpsQ 3794993 rpsQ Staphylococcus aureus RF122 30S ribosomal protein S17 YP_417571.1 2253493 R 273036 CDS YP_417572.1 82751831 3795100 complement(2253780..2253989) 1 NC_007622.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 2253989 rpmC 3795100 rpmC Staphylococcus aureus RF122 50S ribosomal protein L29 YP_417572.1 2253780 R 273036 CDS YP_417573.1 82751832 3795089 complement(2253979..2254413) 1 NC_007622.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 2254413 rplP 3795089 rplP Staphylococcus aureus RF122 50S ribosomal protein L16 YP_417573.1 2253979 R 273036 CDS YP_417574.1 82751833 3792934 complement(2254416..2255069) 1 NC_007622.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 2255069 rpsC 3792934 rpsC Staphylococcus aureus RF122 30S ribosomal protein S3 YP_417574.1 2254416 R 273036 CDS YP_417575.1 82751834 3795095 complement(2255093..2255446) 1 NC_007622.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 2255446 rplV 3795095 rplV Staphylococcus aureus RF122 50S ribosomal protein L22 YP_417575.1 2255093 R 273036 CDS YP_417576.1 82751835 3794995 complement(2255475..2255753) 1 NC_007622.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 2255753 rpsS 3794995 rpsS Staphylococcus aureus RF122 30S ribosomal protein S19 YP_417576.1 2255475 R 273036 CDS YP_417577.1 82751836 3793108 complement(2255820..2256653) 1 NC_007622.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 2256653 rplB 3793108 rplB Staphylococcus aureus RF122 50S ribosomal protein L2 YP_417577.1 2255820 R 273036 CDS YP_417578.1 82751837 3795096 complement(2256686..2256961) 1 NC_007622.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 2256961 rplW 3795096 rplW Staphylococcus aureus RF122 50S ribosomal protein L23 YP_417578.1 2256686 R 273036 CDS YP_417579.1 82751838 3793110 complement(2256961..2257584) 1 NC_007622.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 2257584 rplD 3793110 rplD Staphylococcus aureus RF122 50S ribosomal protein L4 YP_417579.1 2256961 R 273036 CDS YP_417580.1 82751839 3793109 complement(2257611..2258273) 1 NC_007622.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 2258273 rplC 3793109 rplC Staphylococcus aureus RF122 50S ribosomal protein L3 YP_417580.1 2257611 R 273036 CDS YP_417581.1 82751840 3794985 complement(2258301..2258609) 1 NC_007622.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 2258609 rpsJ 3794985 rpsJ Staphylococcus aureus RF122 30S ribosomal protein S10 YP_417581.1 2258301 R 273036 CDS YP_417582.1 82751841 3794509 2258960..2259355 1 NC_007622.1 hypothetical protein 2259355 3794509 SAB2124 Staphylococcus aureus RF122 hypothetical protein YP_417582.1 2258960 D 273036 CDS YP_417583.1 82751842 3794510 complement(2259549..2260883) 1 NC_007622.1 permease family protein 2260883 3794510 SAB2125c Staphylococcus aureus RF122 permease family protein YP_417583.1 2259549 R 273036 CDS YP_417584.1 82751843 3794512 2263317..2264204 1 NC_007622.1 hypothetical protein 2264204 3794512 SAB2127 Staphylococcus aureus RF122 hypothetical protein YP_417584.1 2263317 D 273036 CDS YP_417585.1 82751844 3793644 2264407..2265270 1 NC_007622.1 glucose uptake protein 2265270 glcU 3793644 glcU Staphylococcus aureus RF122 glucose uptake protein YP_417585.1 2264407 D 273036 CDS YP_417586.1 82751845 3794513 complement(2265378..2265551) 1 NC_007622.1 hypothetical protein 2265551 3794513 SAB2129c Staphylococcus aureus RF122 hypothetical protein YP_417586.1 2265378 R 273036 CDS YP_417587.1 82751846 3794514 complement(2265822..2266730) 1 NC_007622.1 hypothetical protein 2266730 3794514 SAB2130c Staphylococcus aureus RF122 hypothetical protein YP_417587.1 2265822 R 273036 CDS YP_417588.1 82751847 3793209 2266863..2267027 1 NC_007622.1 hypothetical protein 2267027 3793209 SAB2131 Staphylococcus aureus RF122 hypothetical protein YP_417588.1 2266863 D 273036 CDS YP_417589.1 82751848 3793210 2267272..2267589 1 NC_007622.1 hypothetical protein 2267589 3793210 SAB2132 Staphylococcus aureus RF122 hypothetical protein YP_417589.1 2267272 D 273036 CDS YP_417590.1 82751849 3793211 complement(2267776..2270943) 1 NC_007622.1 acriflavin resistance transport protein 2270943 3793211 SAB2133c Staphylococcus aureus RF122 acriflavin resistance transport protein YP_417590.1 2267776 R 273036 CDS YP_417591.1 82751850 3794741 complement(2271060..2272325) 1 NC_007622.1 methicillin resistance factor peptidoglycan pentaglycine interpeptide biosynthetic protein 2272325 fmhB 3794741 fmhB Staphylococcus aureus RF122 methicillin resistance factor peptidoglycan pentaglycine interpeptide biosynthetic protein YP_417591.1 2271060 R 273036 CDS YP_417592.1 82751851 3793212 2272714..2272965 1 NC_007622.1 hypothetical protein 2272965 3793212 SAB2135 Staphylococcus aureus RF122 hypothetical protein YP_417592.1 2272714 D 273036 CDS YP_417593.1 82751852 3793213 complement(2272957..2273721) 1 NC_007622.1 hypothetical protein 2273721 3793213 SAB2136c Staphylococcus aureus RF122 hypothetical protein YP_417593.1 2272957 R 273036 CDS YP_417594.1 82751853 3793214 2273884..2274324 1 NC_007622.1 hypothetical protein 2274324 3793214 SAB2137 Staphylococcus aureus RF122 hypothetical protein YP_417594.1 2273884 D 273036 CDS YP_417595.1 82751854 3793215 2274317..2275354 1 NC_007622.1 membrane transporter 2275354 3793215 SAB2138 Staphylococcus aureus RF122 membrane transporter YP_417595.1 2274317 D 273036 CDS YP_417596.1 82751855 3793216 complement(2275624..2275974) 1 NC_007622.1 hypothetical protein 2275974 3793216 SAB2139c Staphylococcus aureus RF122 hypothetical protein YP_417596.1 2275624 R 273036 CDS YP_417597.1 82751856 3792993 complement(2276497..2277519) 1 NC_007622.1 molybdenum cofactor biosynthesis protein A 2277519 moaA 3792993 moaA Staphylococcus aureus RF122 molybdenum cofactor biosynthesis protein A YP_417597.1 2276497 R 273036 CDS YP_417598.1 82751857 3793447 complement(2277539..2278138) 1 NC_007622.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2278138 mobA 3793447 mobA Staphylococcus aureus RF122 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_417598.1 2277539 R 273036 CDS YP_417599.1 82751858 3792996 complement(2278145..2278378) 1 NC_007622.1 molybdopterin converting factor small subunit 2278378 moaD 3792996 moaD Staphylococcus aureus RF122 molybdopterin converting factor small subunit YP_417599.1 2278145 R 273036 CDS YP_417600.1 82751859 3793446 complement(2278384..2278830) 1 NC_007622.1 molybdopterin converting factor small subunit 2278830 moaE 3793446 moaE Staphylococcus aureus RF122 molybdopterin converting factor small subunit YP_417600.1 2278384 R 273036 CDS YP_417601.1 82751860 3793448 complement(2278844..2279329) 1 NC_007622.1 molybdopterin-guanine dinucleotide biosynthesis protein 2279329 mobB 3793448 mobB Staphylococcus aureus RF122 molybdopterin-guanine dinucleotide biosynthesis protein YP_417601.1 2278844 R 273036 CDS YP_417602.1 82751861 3793452 complement(2279326..2280585) 1 NC_007622.1 molybdopterin biosynthesis protein 2280585 moeA 3793452 moeA Staphylococcus aureus RF122 molybdopterin biosynthesis protein YP_417602.1 2279326 R 273036 CDS YP_417603.1 82751862 3792995 2280648..2281142 1 NC_007622.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2281142 moaC 3792995 moaC Staphylococcus aureus RF122 molybdenum cofactor biosynthesis protein MoaC YP_417603.1 2280648 D 273036 CDS YP_417604.1 82751863 3792994 complement(2281144..2281650) 1 NC_007622.1 molybdenum cofactor biosynthesis protein 2281650 moaB 3792994 moaB Staphylococcus aureus RF122 molybdenum cofactor biosynthesis protein YP_417604.1 2281144 R 273036 CDS YP_417605.1 82751864 3793453 complement(2281681..2282685) 1 NC_007622.1 molybdopterin biosynthesis protein 2282685 moeB 3793453 moeB Staphylococcus aureus RF122 molybdopterin biosynthesis protein YP_417605.1 2281681 R 273036 CDS YP_417606.1 82751865 3793451 complement(2282854..2283459) 1 NC_007622.1 molybdenum transport ATP-binding protein 2283459 modC 3793451 modC Staphylococcus aureus RF122 molybdenum transport ATP-binding protein YP_417606.1 2282854 R 273036 CDS YP_417607.1 82751866 3793450 complement(2283460..2284131) 1 NC_007622.1 molybdate transport permease protein 2284131 modB 3793450 modB Staphylococcus aureus RF122 molybdate transport permease protein YP_417607.1 2283460 R 273036 CDS YP_417608.1 82751867 3793449 complement(2284145..2284927) 1 NC_007622.1 molybdate-binding protein 2284927 modA 3793449 modA Staphylococcus aureus RF122 molybdate-binding protein YP_417608.1 2284145 R 273036 CDS YP_417609.1 82751868 3793217 2285217..2286014 1 NC_007622.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 2286014 3793217 SAB2152 Staphylococcus aureus RF122 formate dehydrogenase accessory protein YP_417609.1 2285217 D 273036 CDS YP_417610.1 82751869 3793218 complement(2286186..2286956) 1 NC_007622.1 hypothetical protein 2286956 3793218 SAB2153c Staphylococcus aureus RF122 hypothetical protein YP_417610.1 2286186 R 273036 CDS YP_417611.1 82751870 3793219 complement(2287028..2287582) 1 NC_007622.1 hypothetical protein 2287582 3793219 SAB2154c Staphylococcus aureus RF122 hypothetical protein YP_417611.1 2287028 R 273036 CDS YP_417612.1 82751871 3793220 complement(2287703..2288644) 1 NC_007622.1 inosine-uridine preferring nucleoside hydrolase 2288644 3793220 SAB2155c Staphylococcus aureus RF122 inosine-uridine preferring nucleoside hydrolase YP_417612.1 2287703 R 273036 CDS YP_417613.1 82751872 3794738 complement(2289045..2289953) 1 NC_007622.1 ferrichrome-binding protein 2289953 fhuD2 3794738 fhuD2 Staphylococcus aureus RF122 ferrichrome-binding protein YP_417613.1 2289045 R 273036 CDS YP_417614.1 82751873 3793221 complement(2290168..2291322) 1 NC_007622.1 butyryl-CoA dehydrogenase-like protein 2291322 3793221 SAB2157c Staphylococcus aureus RF122 butyryl-CoA dehydrogenase-like protein YP_417614.1 2290168 R 273036 CDS YP_417615.1 82751874 3793222 complement(2291448..2291552) 1 NC_007622.1 hypothetical protein 2291552 3793222 SAB2158c Staphylococcus aureus RF122 hypothetical protein YP_417615.1 2291448 R 273036 CDS YP_417616.1 82751875 3793223 complement(2291711..2292610) 1 NC_007622.1 urea transporter 2292610 3793223 SAB2159c Staphylococcus aureus RF122 urea transporter YP_417616.1 2291711 R 273036 CDS YP_417617.1 82751876 3795138 2292876..2293178 1 NC_007622.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 2293178 ureA 3795138 ureA Staphylococcus aureus RF122 urease subunit gamma YP_417617.1 2292876 D 273036 CDS YP_417618.1 82751877 3795139 2293192..2293602 1 NC_007622.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Staphylococcus saprophyticus plays a role in bladder invasiveness and may induce the formation of kidney and bladder stones due to the alkalization of urine; urease subunit beta 2293602 ureB 3795139 ureB Staphylococcus aureus RF122 urease subunit beta YP_417618.1 2293192 D 273036 CDS YP_417619.1 82751878 3794164 2293599..2295314 1 NC_007622.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 2295314 ureC 3794164 ureC Staphylococcus aureus RF122 urease subunit alpha YP_417619.1 2293599 D 273036 CDS YP_417620.1 82751879 3794166 2295327..2295779 1 NC_007622.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 2295779 ureE 3794166 ureE Staphylococcus aureus RF122 urease accessory protein UreE YP_417620.1 2295327 D 273036 CDS YP_417621.1 82751880 3794167 2295772..2296461 1 NC_007622.1 urease accessory protein UreF 2296461 ureF 3794167 ureF Staphylococcus aureus RF122 urease accessory protein UreF YP_417621.1 2295772 D 273036 CDS YP_417622.1 82751881 3794168 2296474..2297088 1 NC_007622.1 urease accessory protein UreG 2297088 ureG 3794168 ureG Staphylococcus aureus RF122 urease accessory protein UreG YP_417622.1 2296474 D 273036 CDS YP_417623.1 82751882 3794165 2297088..2297924 1 NC_007622.1 urease accessory protein UreD 2297924 ureD 3794165 ureD Staphylococcus aureus RF122 urease accessory protein UreD YP_417623.1 2297088 D 273036 CDS YP_417624.1 82751883 3793174 complement(2298113..2298460) 1 NC_007622.1 accessory regulator 2298460 sarR 3793174 sarR Staphylococcus aureus RF122 accessory regulator YP_417624.1 2298113 R 273036 CDS YP_417625.1 82751884 3793224 complement(2298888..2299214) 1 NC_007622.1 hypothetical protein 2299214 3793224 SAB2168c Staphylococcus aureus RF122 hypothetical protein YP_417625.1 2298888 R 273036 CDS YP_417626.1 82751885 3793225 complement(2299278..2300021) 1 NC_007622.1 hypothetical protein 2300021 3793225 SAB2169c Staphylococcus aureus RF122 hypothetical protein YP_417626.1 2299278 R 273036 CDS YP_417627.1 82751886 3793226 complement(2300047..2302002) 1 NC_007622.1 transcriptional regulator 2302002 3793226 SAB2170c Staphylococcus aureus RF122 transcriptional regulator YP_417627.1 2300047 R 273036 CDS YP_417628.1 82751887 3793227 2302406..2302522 1 NC_007622.1 hypothetical protein 2302522 3793227 SAB2171 Staphylococcus aureus RF122 hypothetical protein YP_417628.1 2302406 D 273036 CDS YP_417629.1 82751888 3793228 2302612..2303430 1 NC_007622.1 secretory antigen precursor 2303430 3793228 SAB2172 Staphylococcus aureus RF122 secretory antigen precursor YP_417629.1 2302612 D 273036 CDS YP_417630.1 82751889 3793602 complement(2303863..2305056) 1 NC_007622.1 hypothetical protein 2305056 3793602 SAB2173c Staphylococcus aureus RF122 hypothetical protein YP_417630.1 2303863 R 273036 CDS YP_417631.1 82751890 3793603 complement(2305359..2306441) 1 NC_007622.1 hypothetical protein 2306441 3793603 SAB2174c Staphylococcus aureus RF122 hypothetical protein YP_417631.1 2305359 R 273036 CDS YP_417632.1 82751891 3793604 2306689..2307111 1 NC_007622.1 hypothetical protein 2307111 3793604 SAB2175 Staphylococcus aureus RF122 hypothetical protein YP_417632.1 2306689 D 273036 CDS YP_417633.1 82751892 3793605 2307348..2307848 1 NC_007622.1 exported secretory antigen precursor 2307848 3793605 SAB2176 Staphylococcus aureus RF122 exported secretory antigen precursor YP_417633.1 2307348 D 273036 CDS YP_417634.1 82751893 3793606 2307859..2308152 1 NC_007622.1 hypothetical protein 2308152 3793606 SAB2177 Staphylococcus aureus RF122 hypothetical protein YP_417634.1 2307859 D 273036 CDS YP_417635.1 82751894 3793607 2308209..2309162 1 NC_007622.1 dehydrogenase 2309162 3793607 SAB2178 Staphylococcus aureus RF122 dehydrogenase YP_417635.1 2308209 D 273036 CDS YP_417636.1 82751895 3793608 2309331..2309831 1 NC_007622.1 transposase 2309831 3793608 SAB2179 Staphylococcus aureus RF122 transposase YP_417636.1 2309331 D 273036 CDS YP_417637.1 82751896 3793609 2309828..2310652 1 NC_007622.1 transposase 2310652 3793609 SAB2180 Staphylococcus aureus RF122 transposase YP_417637.1 2309828 D 273036 CDS YP_417638.1 82751897 3793610 complement(2310766..2311890) 1 NC_007622.1 hypothetical protein 2311890 3793610 SAB2181c Staphylococcus aureus RF122 hypothetical protein YP_417638.1 2310766 R 273036 CDS YP_417639.1 82751898 3793611 complement(2311963..2312157) 1 NC_007622.1 hypothetical protein 2312157 3793611 SAB2182c Staphylococcus aureus RF122 hypothetical protein YP_417639.1 2311963 R 273036 CDS YP_417640.1 82751899 3793612 complement(2312500..2313276) 1 NC_007622.1 autolysin E 2313276 3793612 SAB2183c Staphylococcus aureus RF122 autolysin E YP_417640.1 2312500 R 273036 CDS YP_417641.1 82751900 3793613 complement(2313298..2313549) 1 NC_007622.1 hypothetical protein 2313549 3793613 SAB2184c Staphylococcus aureus RF122 hypothetical protein YP_417641.1 2313298 R 273036 CDS YP_417642.1 82751901 3793614 complement(2313825..2314298) 1 NC_007622.1 hypothetical protein 2314298 3793614 SAB2185c Staphylococcus aureus RF122 hypothetical protein YP_417642.1 2313825 R 273036 CDS YP_417643.1 82751902 3793615 complement(2314298..2317252) 1 NC_007622.1 formate dehydrogenase alpha subunit 2317252 3793615 SAB2186c Staphylococcus aureus RF122 formate dehydrogenase alpha subunit YP_417643.1 2314298 R 273036 CDS YP_417644.1 82751903 3793616 complement(2317855..2318802) 1 NC_007622.1 transcriptional regulator 2318802 3793616 SAB2187c Staphylococcus aureus RF122 transcriptional regulator YP_417644.1 2317855 R 273036 CDS YP_417645.1 82751904 3793617 complement(2318935..2319732) 1 NC_007622.1 extragenic supressor protein 2319732 3793617 SAB2188c Staphylococcus aureus RF122 extragenic supressor protein YP_417645.1 2318935 R 273036 CDS YP_417646.1 82751905 3793618 2320117..2320809 1 NC_007622.1 DeoR family regulatory protein 2320809 3793618 SAB2189 Staphylococcus aureus RF122 DeoR family regulatory protein YP_417646.1 2320117 D 273036 CDS YP_417647.1 82751906 3793619 complement(2320834..2321571) 1 NC_007622.1 hypothetical protein 2321571 3793619 SAB2190c Staphylococcus aureus RF122 hypothetical protein YP_417647.1 2320834 R 273036 CDS YP_417648.1 82751907 3793620 2321620..2321949 1 NC_007622.1 hypothetical protein 2321949 3793620 SAB2191 Staphylococcus aureus RF122 hypothetical protein YP_417648.1 2321620 D 273036 CDS YP_417649.1 82751908 3793268 2322394..2323266 1 NC_007622.1 transcriptional regulator 2323266 3793268 SAB2192 Staphylococcus aureus RF122 transcriptional regulator YP_417649.1 2322394 D 273036 CDS YP_417650.1 82751909 3793269 complement(2323655..2325034) 1 NC_007622.1 amino acid permease 2325034 3793269 SAB2193c Staphylococcus aureus RF122 amino acid permease YP_417650.1 2323655 R 273036 CDS YP_417651.1 82751910 3793270 2325315..2325671 1 NC_007622.1 hypothetical protein 2325671 3793270 SAB2194 Staphylococcus aureus RF122 hypothetical protein YP_417651.1 2325315 D 273036 CDS YP_417652.1 82751911 3793271 2325668..2325853 1 NC_007622.1 hypothetical protein 2325853 3793271 SAB2195 Staphylococcus aureus RF122 hypothetical protein YP_417652.1 2325668 D 273036 CDS YP_417653.1 82751912 3793272 complement(2325949..2326140) 1 NC_007622.1 hypothetical protein 2326140 3793272 SAB2196c Staphylococcus aureus RF122 hypothetical protein YP_417653.1 2325949 R 273036 CDS YP_417654.1 82751913 3793273 complement(2326151..2326786) 1 NC_007622.1 hypothetical protein 2326786 3793273 SAB2197c Staphylococcus aureus RF122 hypothetical protein YP_417654.1 2326151 R 273036 CDS YP_417655.1 82751914 3793274 complement(2326861..2327778) 1 NC_007622.1 sodium-dependent transporter 2327778 3793274 SAB2198c Staphylococcus aureus RF122 sodium-dependent transporter YP_417655.1 2326861 R 273036 CDS YP_417656.1 82751915 3793275 2328046..2328576 1 NC_007622.1 hypothetical protein 2328576 3793275 SAB2199 Staphylococcus aureus RF122 hypothetical protein YP_417656.1 2328046 D 273036 CDS YP_417657.1 82751916 3793276 complement(2328642..2330246) 1 NC_007622.1 PTS system arbutin-like IIBC component 2330246 3793276 SAB2200c Staphylococcus aureus RF122 PTS system arbutin-like IIBC component YP_417657.1 2328642 R 273036 CDS YP_417658.1 82751917 3793277 2330576..2331340 1 NC_007622.1 transcriptional regulator 2331340 3793277 SAB2201 Staphylococcus aureus RF122 transcriptional regulator YP_417658.1 2330576 D 273036 CDS YP_417659.1 82751918 3793278 complement(2331398..2331904) 1 NC_007622.1 hypothetical protein 2331904 3793278 SAB2202c Staphylococcus aureus RF122 hypothetical protein YP_417659.1 2331398 R 273036 CDS YP_417660.1 82751919 3793279 complement(2332090..2333451) 1 NC_007622.1 Na+/H+ antiporter 2333451 3793279 SAB2203c Staphylococcus aureus RF122 Na+/H+ antiporter YP_417660.1 2332090 R 273036 CDS YP_417661.1 82751920 3793280 complement(2333604..2334173) 1 NC_007622.1 hypothetical protein 2334173 3793280 SAB2204c Staphylococcus aureus RF122 hypothetical protein YP_417661.1 2333604 R 273036 CDS YP_417662.1 82751921 3793281 complement(2334660..2335541) 1 NC_007622.1 oxidoreductase 2335541 3793281 SAB2205c Staphylococcus aureus RF122 oxidoreductase YP_417662.1 2334660 R 273036 CDS YP_417663.1 82751922 3793282 complement(2335652..2336773) 1 NC_007622.1 peptidase 2336773 3793282 SAB2206c Staphylococcus aureus RF122 peptidase YP_417663.1 2335652 R 273036 CDS YP_417664.1 82751923 3794097 complement(2337050..2338288) 1 NC_007622.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 2338288 hutI 3794097 hutI Staphylococcus aureus RF122 imidazolonepropionase YP_417664.1 2337050 R 273036 CDS YP_417665.1 82751924 3794098 complement(2338288..2339949) 1 NC_007622.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 2339949 hutU 3794098 hutU Staphylococcus aureus RF122 urocanate hydratase YP_417665.1 2338288 R 273036 CDS YP_417666.1 82751925 3793283 2340351..2340992 1 NC_007622.1 hypothetical protein 2340992 3793283 SAB2209 Staphylococcus aureus RF122 hypothetical protein YP_417666.1 2340351 D 273036 CDS YP_417667.1 82751926 3793284 complement(2341147..2342463) 1 NC_007622.1 transposase 2342463 3793284 SAB2210c Staphylococcus aureus RF122 transposase YP_417667.1 2341147 R 273036 CDS YP_417668.1 82751927 3794095 complement(2342751..2343686) 1 NC_007622.1 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase 2343686 hutG 3794095 hutG Staphylococcus aureus RF122 formimidoylglutamase YP_417668.1 2342751 R 273036 CDS YP_417669.1 82751928 3793285 2343976..2345232 1 NC_007622.1 hypothetical protein 2345232 3793285 SAB2212 Staphylococcus aureus RF122 hypothetical protein YP_417669.1 2343976 D 273036 CDS YP_417670.1 82751929 3793286 complement(2345297..2345983) 1 NC_007622.1 catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 2345983 3793286 SAB2213c Staphylococcus aureus RF122 ribose-5-phosphate isomerase A YP_417670.1 2345297 R 273036 CDS YP_417671.1 82751930 3793287 2346154..2346807 1 NC_007622.1 hypothetical protein 2346807 3793287 SAB2214 Staphylococcus aureus RF122 hypothetical protein YP_417671.1 2346154 D 273036 CDS YP_417672.1 82751931 3793249 complement(2347043..2348062) 1 NC_007622.1 epimerase 2348062 3793249 SAB2215c Staphylococcus aureus RF122 epimerase YP_417672.1 2347043 R 273036 CDS YP_417673.1 82751932 3793250 complement(2348092..2348418) 1 NC_007622.1 hypothetical protein 2348418 3793250 SAB2216c Staphylococcus aureus RF122 hypothetical protein YP_417673.1 2348092 R 273036 CDS YP_417674.1 82751933 3793251 complement(2348467..2348601) 1 NC_007622.1 hypothetical protein 2348601 3793251 SAB2217c Staphylococcus aureus RF122 hypothetical protein YP_417674.1 2348467 R 273036 CDS YP_417675.1 82751934 3793252 complement(2348636..2349868) 1 NC_007622.1 hypothetical protein 2349868 3793252 SAB2218c Staphylococcus aureus RF122 hypothetical protein YP_417675.1 2348636 R 273036 CDS YP_417676.1 82751935 3793253 complement(2349861..2350760) 1 NC_007622.1 sodium ABC transporter ATP-binding protein 2350760 3793253 SAB2219c Staphylococcus aureus RF122 sodium ABC transporter ATP-binding protein YP_417676.1 2349861 R 273036 CDS YP_417677.1 82751936 3793254 complement(2350991..2351638) 1 NC_007622.1 hypothetical protein 2351638 3793254 SAB2220c Staphylococcus aureus RF122 hypothetical protein YP_417677.1 2350991 R 273036 CDS YP_417678.1 82751937 3793255 2351806..2351949 1 NC_007622.1 hypothetical protein 2351949 3793255 SAB2221 Staphylococcus aureus RF122 hypothetical protein YP_417678.1 2351806 D 273036 CDS YP_417679.1 82751938 3793256 2352037..2352645 1 NC_007622.1 3-methyladenine DNA glycosylase 2352645 3793256 SAB2222 Staphylococcus aureus RF122 3-methyladenine DNA glycosylase YP_417679.1 2352037 D 273036 CDS YP_417680.1 82751939 3793257 2352646..2352834 1 NC_007622.1 3-methyladenine DNA glycosylase 2352834 3793257 SAB2223 Staphylococcus aureus RF122 3-methyladenine DNA glycosylase YP_417680.1 2352646 D 273036 CDS YP_417681.1 82751940 3793258 2352982..2354190 1 NC_007622.1 sodium/glutamate symporter 2354190 3793258 SAB2224 Staphylococcus aureus RF122 sodium/glutamate symporter YP_417681.1 2352982 D 273036 CDS YP_417682.1 82751941 3794746 complement(2354238..2355287) 1 NC_007622.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 2355287 fni 3794746 fni Staphylococcus aureus RF122 isopentenyl pyrophosphate isomerase YP_417682.1 2354238 R 273036 CDS YP_417683.1 82751942 3793259 complement(2355318..2356265) 1 NC_007622.1 divalent cation transporter 2356265 3793259 SAB2226c Staphylococcus aureus RF122 divalent cation transporter YP_417683.1 2355318 R 273036 CDS YP_417684.1 82751943 3793260 2356362..2356853 1 NC_007622.1 hypothetical protein 2356853 3793260 SAB2227 Staphylococcus aureus RF122 hypothetical protein YP_417684.1 2356362 D 273036 CDS YP_417685.1 82751944 3793261 2356850..2357269 1 NC_007622.1 hypothetical protein 2357269 3793261 SAB2228 Staphylococcus aureus RF122 hypothetical protein YP_417685.1 2356850 D 273036 CDS YP_417686.1 82751945 3793262 complement(2357379..2358299) 1 NC_007622.1 hypothetical protein 2358299 3793262 SAB2229c Staphylococcus aureus RF122 hypothetical protein YP_417686.1 2357379 R 273036 CDS YP_417687.1 82751946 3793263 2358507..2359145 1 NC_007622.1 hypothetical protein 2359145 3793263 SAB2230 Staphylococcus aureus RF122 hypothetical protein YP_417687.1 2358507 D 273036 CDS YP_417688.1 82751947 3793264 complement(2359392..2361323) 1 NC_007622.1 multidrug ABC transporter 2361323 3793264 SAB2231c Staphylococcus aureus RF122 multidrug ABC transporter YP_417688.1 2359392 R 273036 CDS YP_417689.1 82751948 3793265 complement(2361336..2361983) 1 NC_007622.1 hypothetical protein 2361983 3793265 SAB2232c Staphylococcus aureus RF122 hypothetical protein YP_417689.1 2361336 R 273036 CDS YP_417690.1 82751949 3793266 2362104..2362658 1 NC_007622.1 TetR family regulatory protein 2362658 3793266 SAB2233 Staphylococcus aureus RF122 TetR family regulatory protein YP_417690.1 2362104 D 273036 CDS YP_417691.1 82751950 3793323 complement(2362884..2364092) 1 NC_007622.1 bicyclomycin and teicoplanin resistance protein 2364092 tcaB 3793323 tcaB Staphylococcus aureus RF122 bicyclomycin and teicoplanin resistance protein YP_417691.1 2362884 R 273036 CDS YP_417692.1 82751951 3793322 complement(2364361..2365743) 1 NC_007622.1 bicyclomycin and teicoplanin resistance protein 2365743 tcaA 3793322 tcaA Staphylococcus aureus RF122 bicyclomycin and teicoplanin resistance protein YP_417692.1 2364361 R 273036 CDS YP_417693.1 82751952 3793324 complement(2365983..2366438) 1 NC_007622.1 bicyclomycin resistance transcriptional regulator 2366438 tcaR 3793324 tcaR Staphylococcus aureus RF122 bicyclomycin resistance transcriptional regulator YP_417693.1 2365983 R 273036 CDS YP_417694.1 82751953 3793267 2366633..2367601 1 NC_007622.1 hypothetical protein 2367601 3793267 SAB2237 Staphylococcus aureus RF122 hypothetical protein YP_417694.1 2366633 D 273036 CDS YP_417695.1 82751954 3793875 complement(2367832..2368497) 1 NC_007622.1 ABC transporter ATP-binding protein 2368497 3793875 SAB2238c Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_417695.1 2367832 R 273036 CDS YP_417696.1 82751955 3793876 complement(2368497..2369552) 1 NC_007622.1 permease protein 2369552 3793876 SAB2239c Staphylococcus aureus RF122 permease protein YP_417696.1 2368497 R 273036 CDS YP_417697.1 82751956 3793877 2369688..2370362 1 NC_007622.1 two-component response regulator 2370362 3793877 SAB2240 Staphylococcus aureus RF122 two-component response regulator YP_417697.1 2369688 D 273036 CDS YP_417698.1 82751957 3793878 2370355..2371728 1 NC_007622.1 two-component sensor histidine kinase sensor 2371728 3793878 SAB2241 Staphylococcus aureus RF122 two-component sensor histidine kinase sensor YP_417698.1 2370355 D 273036 CDS YP_417699.1 82751958 3793879 2371890..2372333 1 NC_007622.1 hypothetical protein 2372333 3793879 SAB2242 Staphylococcus aureus RF122 hypothetical protein YP_417699.1 2371890 D 273036 CDS YP_417700.1 82751959 3793880 2372330..2372785 1 NC_007622.1 hypothetical protein 2372785 3793880 SAB2243 Staphylococcus aureus RF122 hypothetical protein YP_417700.1 2372330 D 273036 CDS YP_417701.2 161777616 3793455 complement(2372851..2374329) 1 NC_007622.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 2374329 mqo 3793455 mqo Staphylococcus aureus RF122 malate:quinone oxidoreductase YP_417701.2 2372851 R 273036 CDS YP_417702.1 82751961 3794754 complement(2374710..2376308) 1 NC_007622.1 L-lactate permease 2376308 lldP 3794754 lldP Staphylococcus aureus RF122 L-lactate permease YP_417702.1 2374710 R 273036 CDS YP_417703.1 82751962 3793881 complement(2376302..2376430) 1 NC_007622.1 hypothetical protein 2376430 3793881 SAB2246c Staphylococcus aureus RF122 hypothetical protein YP_417703.1 2376302 R 273036 CDS YP_417704.1 82751963 3793882 2376625..2378298 1 NC_007622.1 hypothetical protein 2378298 3793882 SAB2247 Staphylococcus aureus RF122 hypothetical protein YP_417704.1 2376625 D 273036 CDS YP_417705.1 82751964 3793883 complement(2378451..2379080) 1 NC_007622.1 hypothetical protein 2379080 3793883 SAB2248c Staphylococcus aureus RF122 hypothetical protein YP_417705.1 2378451 R 273036 CDS YP_417706.1 82751965 3793884 complement(2379394..2379909) 1 NC_007622.1 transcriptional regulator 2379909 3793884 SAB2249c Staphylococcus aureus RF122 transcriptional regulator YP_417706.1 2379394 R 273036 CDS YP_417707.1 82751966 3793885 2380096..2381100 1 NC_007622.1 hypothetical protein 2381100 3793885 SAB2250 Staphylococcus aureus RF122 hypothetical protein YP_417707.1 2380096 D 273036 CDS YP_417708.1 82751967 3793886 complement(2381146..2381547) 1 NC_007622.1 hypothetical protein 2381547 3793886 SAB2251c Staphylococcus aureus RF122 hypothetical protein YP_417708.1 2381146 R 273036 CDS YP_417709.1 82751968 3793887 complement(2381583..2382617) 1 NC_007622.1 thioredoxin reductase 2382617 3793887 SAB2252c Staphylococcus aureus RF122 thioredoxin reductase YP_417709.1 2381583 R 273036 CDS YP_417710.1 82751969 3793888 complement(2382849..2383280) 1 NC_007622.1 hypothetical protein 2383280 3793888 SAB2253c Staphylococcus aureus RF122 hypothetical protein YP_417710.1 2382849 R 273036 CDS YP_417711.1 82751970 3793889 complement(2383486..2384712) 1 NC_007622.1 hypothetical protein 2384712 3793889 SAB2254c Staphylococcus aureus RF122 hypothetical protein YP_417711.1 2383486 R 273036 CDS YP_417712.1 82751971 3793890 2384873..2385496 1 NC_007622.1 hypothetical protein 2385496 3793890 SAB2255 Staphylococcus aureus RF122 hypothetical protein YP_417712.1 2384873 D 273036 CDS YP_417713.1 82751972 3793891 2385542..2386486 1 NC_007622.1 cationic membrane transport protein 2386486 3793891 SAB2256 Staphylococcus aureus RF122 cationic membrane transport protein YP_417713.1 2385542 D 273036 CDS YP_417714.1 82751973 3793178 complement(2386572..2388014) 1 NC_007622.1 PTS system sucrose-specific IIBC component 2388014 scrA 3793178 scrA Staphylococcus aureus RF122 PTS system sucrose-specific IIBC component YP_417714.1 2386572 R 273036 CDS YP_417715.1 82751974 3793892 2388197..2388580 1 NC_007622.1 hypothetical protein 2388580 3793892 SAB2258 Staphylococcus aureus RF122 hypothetical protein YP_417715.1 2388197 D 273036 CDS YP_417716.1 82751975 3793893 2389855..2390028 1 NC_007622.1 hypothetical protein 2390028 3793893 SAB2259 Staphylococcus aureus RF122 hypothetical protein YP_417716.1 2389855 D 273036 CDS YP_417717.1 82751976 3793894 2390068..2392173 1 NC_007622.1 hypothetical protein 2392173 3793894 SAB2260 Staphylococcus aureus RF122 hypothetical protein YP_417717.1 2390068 D 273036 CDS YP_417718.1 82751977 3792842 2392244..2392666 1 NC_007622.1 hypothetical protein 2392666 3792842 SAB2261 Staphylococcus aureus RF122 hypothetical protein YP_417718.1 2392244 D 273036 CDS YP_417719.1 82751978 3792843 2392944..2393312 1 NC_007622.1 hypothetical protein 2393312 3792843 SAB2262 Staphylococcus aureus RF122 hypothetical protein YP_417719.1 2392944 D 273036 CDS YP_417720.1 82751979 3793657 complement(2393507..2394784) 1 NC_007622.1 proton, sodium-glutamate symport protein 2394784 gltT 3793657 gltT Staphylococcus aureus RF122 proton, sodium-glutamate symport protein YP_417720.1 2393507 R 273036 CDS YP_417721.1 82751980 3792844 complement(2394966..2395331) 1 NC_007622.1 hypothetical protein 2395331 3792844 SAB2264c Staphylococcus aureus RF122 hypothetical protein YP_417721.1 2394966 R 273036 CDS YP_417722.1 82751981 3792845 2395729..2396175 1 NC_007622.1 MarR family transcriptional regulator 2396175 3792845 SAB2265 Staphylococcus aureus RF122 MarR family transcriptional regulator YP_417722.1 2395729 D 273036 CDS YP_417723.1 82751982 3792846 2396391..2396819 1 NC_007622.1 hypothetical protein 2396819 3792846 SAB2266 Staphylococcus aureus RF122 hypothetical protein YP_417723.1 2396391 D 273036 CDS YP_417724.1 82751983 3794144 complement(2396926..2398095) 1 NC_007622.1 nitrite extrusion protein 2398095 narT 3794144 narT Staphylococcus aureus RF122 nitrite extrusion protein YP_417724.1 2396926 R 273036 CDS YP_417725.1 82751984 3792847 2398454..2399368 1 NC_007622.1 hypothetical protein 2399368 3792847 SAB2268 Staphylococcus aureus RF122 hypothetical protein YP_417725.1 2398454 D 273036 CDS YP_417726.1 82751985 3792848 2399347..2400087 1 NC_007622.1 regulatory protein 2400087 3792848 SAB2269 Staphylococcus aureus RF122 regulatory protein YP_417726.1 2399347 D 273036 CDS YP_417727.1 82751986 3792849 complement(2400344..2400997) 1 NC_007622.1 two-component response regulator 2400997 3792849 SAB2270c Staphylococcus aureus RF122 two-component response regulator YP_417727.1 2400344 R 273036 CDS YP_417728.1 82751987 3792850 complement(2401020..2402054) 1 NC_007622.1 two component sensor histidine kinase 2402054 3792850 SAB2271c Staphylococcus aureus RF122 two component sensor histidine kinase YP_417728.1 2401020 R 273036 CDS YP_417729.1 82751988 3792851 complement(2402078..2402530) 1 NC_007622.1 hypothetical protein 2402530 3792851 SAB2272c Staphylococcus aureus RF122 hypothetical protein YP_417729.1 2402078 R 273036 CDS YP_417730.1 82751989 3794142 complement(2402550..2403227) 1 NC_007622.1 nitrate reductase gamma chain 2403227 narI 3794142 narI Staphylococcus aureus RF122 nitrate reductase gamma chain YP_417730.1 2402550 R 273036 CDS YP_417731.1 82751990 3794143 complement(2403220..2403795) 1 NC_007622.1 nitrate reductase delta chain 2403795 narJ 3794143 narJ Staphylococcus aureus RF122 nitrate reductase delta chain YP_417731.1 2403220 R 273036 CDS YP_417732.1 82751991 3794141 complement(2403788..2405347) 1 NC_007622.1 nitrate reductase beta chain 2405347 narH 3794141 narH Staphylococcus aureus RF122 nitrate reductase beta chain YP_417732.1 2403788 R 273036 CDS YP_417733.1 82751992 3794140 complement(2405337..2409026) 1 NC_007622.1 nitrate reductase alpha chain 2409026 narG 3794140 narG Staphylococcus aureus RF122 nitrate reductase alpha chain YP_417733.1 2405337 R 273036 CDS YP_417734.1 82751993 3792852 complement(2408998..2409123) 1 NC_007622.1 hypothetical protein 2409123 3792852 SAB2277c Staphylococcus aureus RF122 hypothetical protein YP_417734.1 2408998 R 273036 CDS YP_417735.1 82751994 3792853 complement(2409334..2410311) 1 NC_007622.1 uroporphyrin-III C-methyltransferase 2410311 3792853 SAB2278c Staphylococcus aureus RF122 uroporphyrin-III C-methyltransferase YP_417735.1 2409334 R 273036 CDS YP_417736.1 82751995 3793622 complement(2410302..2410616) 1 NC_007622.1 assimilatory nitrite reductase 2410616 nasE 3793622 nasE Staphylococcus aureus RF122 assimilatory nitrite reductase YP_417736.1 2410302 R 273036 CDS YP_417737.1 82751996 3793621 complement(2410620..2413025) 1 NC_007622.1 nitrite reductase 2413025 nasD 3793621 nasD Staphylococcus aureus RF122 nitrite reductase YP_417737.1 2410620 R 273036 CDS YP_417738.1 82751997 3792854 complement(2413053..2413838) 1 NC_007622.1 fumarate and nitrate reduction regulatory protein 2413838 3792854 SAB2281c Staphylococcus aureus RF122 fumarate and nitrate reduction regulatory protein YP_417738.1 2413053 R 273036 CDS YP_417739.1 82751998 3792855 complement(2414048..2414596) 1 NC_007622.1 hypothetical protein 2414596 3792855 SAB2282c Staphylococcus aureus RF122 hypothetical protein YP_417739.1 2414048 R 273036 CDS YP_417740.1 82751999 3792856 complement(2415028..2415852) 1 NC_007622.1 nitrite transporter 2415852 3792856 SAB2283c Staphylococcus aureus RF122 nitrite transporter YP_417740.1 2415028 R 273036 CDS YP_417741.1 82752000 3792857 complement(2416055..2416237) 1 NC_007622.1 hypothetical protein 2416237 3792857 SAB2284c Staphylococcus aureus RF122 hypothetical protein YP_417741.1 2416055 R 273036 CDS YP_417742.1 82752001 3792858 complement(2416324..2416791) 1 NC_007622.1 hypothetical protein 2416791 3792858 SAB2285c Staphylococcus aureus RF122 hypothetical protein YP_417742.1 2416324 R 273036 CDS YP_417743.1 82752002 3792859 complement(2416977..2418524) 1 NC_007622.1 zinc-binding lipoprotein 2418524 3792859 SAB2286c Staphylococcus aureus RF122 zinc-binding lipoprotein YP_417743.1 2416977 R 273036 CDS YP_417744.1 82752003 3792860 complement(2418818..2419084) 1 NC_007622.1 hypothetical protein 2419084 3792860 SAB2287c Staphylococcus aureus RF122 hypothetical protein YP_417744.1 2418818 R 273036 CDS YP_417745.1 82752004 3794046 complement(2419084..2419335) 1 NC_007622.1 hypothetical protein 2419335 3794046 SAB2288c Staphylococcus aureus RF122 hypothetical protein YP_417745.1 2419084 R 273036 CDS YP_417746.1 82752005 3794047 complement(2419606..2420205) 1 NC_007622.1 lipoprotein 2420205 3794047 SAB2289c Staphylococcus aureus RF122 lipoprotein YP_417746.1 2419606 R 273036 CDS YP_417747.1 82752006 3794048 complement(2420224..2420586) 1 NC_007622.1 lipoprotein 2420586 3794048 SAB2290c Staphylococcus aureus RF122 lipoprotein YP_417747.1 2420224 R 273036 CDS YP_417748.1 82752007 3794049 complement(2422187..2422918) 1 NC_007622.1 ABC transporter 2422918 3794049 SAB2292c Staphylococcus aureus RF122 ABC transporter YP_417748.1 2422187 R 273036 CDS YP_417749.1 82752008 3794050 complement(2422915..2423634) 1 NC_007622.1 ABC transporter permease 2423634 3794050 SAB2293c Staphylococcus aureus RF122 ABC transporter permease YP_417749.1 2422915 R 273036 CDS YP_417750.1 82752009 3794051 complement(2423615..2424394) 1 NC_007622.1 extracellular amino acid binding ABC transporter 2424394 3794051 SAB2294c Staphylococcus aureus RF122 extracellular amino acid binding ABC transporter YP_417750.1 2423615 R 273036 CDS YP_417751.1 82752010 3794052 complement(2424515..2425954) 1 NC_007622.1 multidrug resistanc-related transport system protein 2425954 3794052 SAB2295c Staphylococcus aureus RF122 multidrug resistanc-related transport system protein YP_417751.1 2424515 R 273036 CDS YP_417752.1 82752011 3794053 complement(2426387..2427073) 1 NC_007622.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 2427073 gpmA 3794053 gpmA Staphylococcus aureus RF122 phosphoglyceromutase YP_417752.1 2426387 R 273036 CDS YP_417753.1 82752012 3794054 complement(2427400..2428266) 1 NC_007622.1 cation efflux family protein 2428266 3794054 SAB2297c Staphylococcus aureus RF122 cation efflux family protein YP_417753.1 2427400 R 273036 CDS YP_417754.1 82752013 3793176 2428895..2430205 1 NC_007622.1 immunoglobulin G-binding protein 2430205 sbi 3793176 sbi Staphylococcus aureus RF122 immunoglobulin G-binding protein YP_417754.1 2428895 D 273036 CDS YP_417755.1 82752014 3794055 complement(2430378..2430560) 1 NC_007622.1 hypothetical protein 2430560 3794055 SAB2299c Staphylococcus aureus RF122 hypothetical protein YP_417755.1 2430378 R 273036 CDS YP_417756.1 82752015 3794922 2430695..2431624 1 NC_007622.1 gamma-hemolysin component A precursor 2431624 hlgA 3794922 hlgA Staphylococcus aureus RF122 gamma-hemolysin component A precursor YP_417756.1 2430695 D 273036 CDS YP_417757.1 82752016 3794924 2432192..2433139 1 NC_007622.1 gamma-hemolysin component C 2433139 hlgC 3794924 hlgC Staphylococcus aureus RF122 gamma-hemolysin component C YP_417757.1 2432192 D 273036 CDS YP_417758.1 82752017 3794923 2433141..2433947 1 NC_007622.1 gamma-hemolysin component B 2433947 hlgB 3794923 hlgB Staphylococcus aureus RF122 gamma-hemolysin component B YP_417758.1 2433141 D 273036 CDS YP_417759.1 82752018 3794056 complement(2434169..2434636) 1 NC_007622.1 hypothetical protein 2434636 3794056 SAB2303c Staphylococcus aureus RF122 hypothetical protein YP_417759.1 2434169 R 273036 CDS YP_417760.1 82752019 3794057 complement(2434647..2435339) 1 NC_007622.1 catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A; 6-carboxyhexanoate--CoA ligase 2435339 3794057 SAB2304c Staphylococcus aureus RF122 6-carboxyhexanoate--CoA ligase YP_417760.1 2434647 R 273036 CDS YP_417761.1 82752020 3794058 complement(2435350..2436465) 1 NC_007622.1 hypothetical protein 2436465 3794058 SAB2305c Staphylococcus aureus RF122 hypothetical protein YP_417761.1 2435350 R 273036 CDS YP_417762.1 82752021 3792660 complement(2436443..2437450) 1 NC_007622.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase 2437450 bioB 3792660 bioB Staphylococcus aureus RF122 biotin synthase YP_417762.1 2436443 R 273036 CDS YP_417763.1 82752022 3792659 complement(2437452..2438810) 1 NC_007622.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2438810 bioA 3792659 bioA Staphylococcus aureus RF122 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_417763.1 2437452 R 273036 CDS YP_417764.1 82752023 3794059 complement(2438788..2439474) 1 NC_007622.1 dethiobiotin synthetase 2439474 3794059 SAB2308c Staphylococcus aureus RF122 dethiobiotin synthetase YP_417764.1 2438788 R 273036 CDS YP_417765.1 82752024 3794061 complement(2441663..2443360) 1 NC_007622.1 truncated ATP-binding ABC transporter 2443360 3794061 SAB2310c Staphylococcus aureus RF122 truncated ATP-binding ABC transporter YP_417765.1 2441663 R 273036 CDS YP_417766.1 82752025 3794062 complement(2443573..2443767) 1 NC_007622.1 hypothetical protein 2443767 3794062 SAB2311c Staphylococcus aureus RF122 hypothetical protein YP_417766.1 2443573 R 273036 CDS YP_417767.1 82752026 3794063 2443995..2444231 1 NC_007622.1 hypothetical protein 2444231 3794063 SAB2312 Staphylococcus aureus RF122 hypothetical protein YP_417767.1 2443995 D 273036 CDS YP_417768.1 82752027 3794064 complement(2444233..2444619) 1 NC_007622.1 hypothetical protein 2444619 3794064 SAB2313c Staphylococcus aureus RF122 hypothetical protein YP_417768.1 2444233 R 273036 CDS YP_417769.1 82752028 3794065 2444887..2446029 1 NC_007622.1 glycerate kinase 2446029 3794065 SAB2314 Staphylococcus aureus RF122 glycerate kinase YP_417769.1 2444887 D 273036 CDS YP_417770.1 82752029 3793388 2446089..2446748 1 NC_007622.1 hypothetical protein 2446748 3793388 SAB2315 Staphylococcus aureus RF122 hypothetical protein YP_417770.1 2446089 D 273036 CDS YP_417771.1 82752030 3793389 2446931..2448142 1 NC_007622.1 transporter protein 2448142 3793389 SAB2316 Staphylococcus aureus RF122 transporter protein YP_417771.1 2446931 D 273036 CDS YP_417772.1 82752031 3793390 complement(2448265..2448738) 1 NC_007622.1 hypothetical protein 2448738 3793390 SAB2317c Staphylococcus aureus RF122 hypothetical protein YP_417772.1 2448265 R 273036 CDS YP_417773.1 82752032 3793391 2448851..2449507 1 NC_007622.1 hypothetical protein 2449507 3793391 SAB2318 Staphylococcus aureus RF122 hypothetical protein YP_417773.1 2448851 D 273036 CDS YP_417774.1 82752033 3793392 complement(2449570..2450376) 1 NC_007622.1 hypothetical protein 2450376 3793392 SAB2319c Staphylococcus aureus RF122 hypothetical protein YP_417774.1 2449570 R 273036 CDS YP_417775.1 82752034 3793393 2450662..2452071 1 NC_007622.1 amino acid ABC transporter 2452071 3793393 SAB2320 Staphylococcus aureus RF122 amino acid ABC transporter YP_417775.1 2450662 D 273036 CDS YP_417776.1 82752035 3793394 2452208..2454286 1 NC_007622.1 sodium hydrogen exchanger family protein 2454286 3793394 SAB2321 Staphylococcus aureus RF122 sodium hydrogen exchanger family protein YP_417776.1 2452208 D 273036 CDS YP_417777.1 82752036 3793395 complement(2454427..2456256) 1 NC_007622.1 hypothetical protein 2456256 3793395 SAB2322c Staphylococcus aureus RF122 hypothetical protein YP_417777.1 2454427 R 273036 CDS YP_417778.1 82752037 3793396 2456488..2457987 1 NC_007622.1 drug resistance-involved membrane protein 2457987 3793396 SAB2323 Staphylococcus aureus RF122 drug resistance-involved membrane protein YP_417778.1 2456488 D 273036 CDS YP_417779.1 82752038 3793397 complement(2458094..2458936) 1 NC_007622.1 hypothetical protein 2458936 3793397 SAB2324c Staphylococcus aureus RF122 hypothetical protein YP_417779.1 2458094 R 273036 CDS YP_417780.1 82752039 3793398 complement(2459278..2460213) 1 NC_007622.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2460213 3793398 SAB2325c Staphylococcus aureus RF122 2-dehydropantoate 2-reductase YP_417780.1 2459278 R 273036 CDS YP_417781.1 82752040 3793399 complement(2460439..2461839) 1 NC_007622.1 transmembrane efflux protein 2461839 3793399 SAB2326c Staphylococcus aureus RF122 transmembrane efflux protein YP_417781.1 2460439 R 273036 CDS YP_417782.1 82752041 3794110 complement(2462133..2462828) 1 NC_007622.1 betaine-carnitine-choline ABC transporter 2462828 opuCD 3794110 opuCD Staphylococcus aureus RF122 betaine-carnitine-choline ABC transporter YP_417782.1 2462133 R 273036 CDS YP_417783.1 82752042 3794109 complement(2462828..2463769) 1 NC_007622.1 betaine-carnitine-choline ABC transporter 2463769 opuCC 3794109 opuCC Staphylococcus aureus RF122 betaine-carnitine-choline ABC transporter YP_417783.1 2462828 R 273036 CDS YP_417784.1 82752043 3794108 complement(2463786..2464421) 1 NC_007622.1 betaine-carnitine-choline ABC transporter 2464421 opuCB 3794108 opuCB Staphylococcus aureus RF122 betaine-carnitine-choline ABC transporter YP_417784.1 2463786 R 273036 CDS YP_417785.1 82752044 3794107 complement(2464418..2465644) 1 NC_007622.1 betaine-carnitine-choline ABC transporter 2465644 opuCA 3794107 opuCA Staphylococcus aureus RF122 betaine-carnitine-choline ABC transporter YP_417785.1 2464418 R 273036 CDS YP_417786.1 82752045 3793401 2467092..2468729 1 NC_007622.1 amino acid transporter permease 2468729 3793401 SAB2332 Staphylococcus aureus RF122 amino acid transporter permease YP_417786.1 2467092 D 273036 CDS YP_417787.1 82752046 3793402 2468957..2470309 1 NC_007622.1 carboxylesterase 2470309 3793402 SAB2333 Staphylococcus aureus RF122 carboxylesterase YP_417787.1 2468957 D 273036 CDS YP_417788.1 82752047 3793403 complement(2470371..2471555) 1 NC_007622.1 membrane transporter 2471555 3793403 SAB2334c Staphylococcus aureus RF122 membrane transporter YP_417788.1 2470371 R 273036 CDS YP_417789.1 82752048 3793404 complement(2471951..2472727) 1 NC_007622.1 hypothetical protein 2472727 3793404 SAB2335c Staphylococcus aureus RF122 hypothetical protein YP_417789.1 2471951 R 273036 CDS YP_417790.1 82752049 3793405 complement(2472720..2473382) 1 NC_007622.1 ATP-binding ABC transporter 2473382 3793405 SAB2336c Staphylococcus aureus RF122 ATP-binding ABC transporter YP_417790.1 2472720 R 273036 CDS YP_417791.1 82752050 3793406 complement(2473470..2473598) 1 NC_007622.1 hypothetical protein 2473598 3793406 SAB2337c Staphylococcus aureus RF122 hypothetical protein YP_417791.1 2473470 R 273036 CDS YP_417792.1 82752051 3793947 complement(2473728..2474804) 1 NC_007622.1 endo-1,4-beta-glucanase 2474804 3793947 SAB2338c Staphylococcus aureus RF122 endo-1,4-beta-glucanase YP_417792.1 2473728 R 273036 CDS YP_417793.1 82752052 3793948 complement(2475160..2475426) 1 NC_007622.1 hypothetical protein 2475426 3793948 SAB2339c Staphylococcus aureus RF122 hypothetical protein YP_417793.1 2475160 R 273036 CDS YP_417794.1 82752053 3793949 complement(2475426..2475683) 1 NC_007622.1 hypothetical protein 2475683 3793949 SAB2340c Staphylococcus aureus RF122 hypothetical protein YP_417794.1 2475426 R 273036 CDS YP_417795.1 82752054 3793950 complement(2475807..2475983) 1 NC_007622.1 hypothetical protein 2475983 3793950 SAB2341c Staphylococcus aureus RF122 hypothetical protein YP_417795.1 2475807 R 273036 CDS YP_417796.1 82752055 3793951 2476042..2476497 1 NC_007622.1 lipoprotein 2476497 3793951 SAB2342 Staphylococcus aureus RF122 lipoprotein YP_417796.1 2476042 D 273036 CDS YP_417797.1 82752056 3793952 complement(2476665..2478242) 1 NC_007622.1 glutamate synthase-ferredoxin large subunit 2478242 3793952 SAB2343c Staphylococcus aureus RF122 glutamate synthase-ferredoxin large subunit YP_417797.1 2476665 R 273036 CDS YP_417798.1 82752057 3793953 2478436..2479185 1 NC_007622.1 hypothetical protein 2479185 3793953 SAB2344 Staphylococcus aureus RF122 hypothetical protein YP_417798.1 2478436 D 273036 CDS YP_417799.1 82752058 3793954 complement(2479409..2480602) 1 NC_007622.1 antibiotic resistance transport protein 2480602 3793954 SAB2345c Staphylococcus aureus RF122 antibiotic resistance transport protein YP_417799.1 2479409 R 273036 CDS YP_417800.1 82752059 3793637 complement(2480614..2481363) 1 NC_007622.1 oligopeptide transporter ATPase subunit 2481363 opp1F 3793637 opp1F Staphylococcus aureus RF122 oligopeptide transporter ATPase subunit YP_417800.1 2480614 R 273036 CDS YP_417801.1 82752060 3793636 complement(2481356..2482171) 1 NC_007622.1 oligopeptide transporter ATPase subunit 2482171 opp1D 3793636 opp1D Staphylococcus aureus RF122 oligopeptide transporter ATPase subunit YP_417801.1 2481356 R 273036 CDS YP_417802.1 82752061 3793635 complement(2482168..2483037) 1 NC_007622.1 oligopeptide transporter permease 2483037 opp1C 3793635 opp1C Staphylococcus aureus RF122 oligopeptide transporter permease YP_417802.1 2482168 R 273036 CDS YP_417803.1 82752062 3793634 complement(2483034..2483969) 1 NC_007622.1 oligopeptide transporter permease 2483969 opp1B 3793634 opp1B Staphylococcus aureus RF122 oligopeptide transporter permease YP_417803.1 2483034 R 273036 CDS YP_417804.1 82752063 3793633 complement(2483982..2485580) 1 NC_007622.1 peptide ABC transporter substrate-binding protein 2485580 opp1A 3793633 opp1A Staphylococcus aureus RF122 peptide ABC transporter substrate-binding protein YP_417804.1 2483982 R 273036 CDS YP_417805.1 82752064 3793955 complement(2485723..2487024) 1 NC_007622.1 hypothetical protein 2487024 3793955 SAB2351c Staphylococcus aureus RF122 hypothetical protein YP_417805.1 2485723 R 273036 CDS YP_417806.1 82752065 3793956 complement(2487017..2487835) 1 NC_007622.1 hypothetical protein 2487835 3793956 SAB2352c Staphylococcus aureus RF122 hypothetical protein YP_417806.1 2487017 R 273036 CDS YP_417807.1 82752066 3793957 complement(2487846..2488667) 1 NC_007622.1 hypothetical protein 2488667 3793957 SAB2353c Staphylococcus aureus RF122 hypothetical protein YP_417807.1 2487846 R 273036 CDS YP_417808.1 82752067 3793958 complement(2489356..2490123) 1 NC_007622.1 hypothetical protein 2490123 3793958 SAB2354c Staphylococcus aureus RF122 hypothetical protein YP_417808.1 2489356 R 273036 CDS YP_417809.1 82752068 3793959 complement(2490224..2491042) 1 NC_007622.1 short chain dehydrogenase 2491042 3793959 SAB2355c Staphylococcus aureus RF122 short chain dehydrogenase YP_417809.1 2490224 R 273036 CDS YP_417810.1 82752069 3793960 2491276..2492814 1 NC_007622.1 transport protein 2492814 3793960 SAB2356 Staphylococcus aureus RF122 transport protein YP_417810.1 2491276 D 273036 CDS YP_417811.1 82752070 3793961 complement(2492926..2493348) 1 NC_007622.1 hypothetical protein 2493348 3793961 SAB2357c Staphylococcus aureus RF122 hypothetical protein YP_417811.1 2492926 R 273036 CDS YP_417812.1 82752071 3793962 complement(2493804..2494223) 1 NC_007622.1 hypothetical protein 2494223 3793962 SAB2358c Staphylococcus aureus RF122 hypothetical protein YP_417812.1 2493804 R 273036 CDS YP_417813.1 82752072 3793965 2496540..2496821 1 NC_007622.1 hypothetical protein 2496821 3793965 SAB2362 Staphylococcus aureus RF122 hypothetical protein YP_417813.1 2496540 D 273036 CDS YP_417814.1 82752073 3793966 complement(2497081..2497272) 1 NC_007622.1 hypothetical protein 2497272 3793966 SAB2363c Staphylococcus aureus RF122 hypothetical protein YP_417814.1 2497081 R 273036 CDS YP_417815.1 82752074 3792784 complement(2497340..2497495) 1 NC_007622.1 hypothetical protein 2497495 3792784 SAB2364c Staphylococcus aureus RF122 hypothetical protein YP_417815.1 2497340 R 273036 CDS YP_417816.1 82752075 3792785 complement(2498278..2498565) 1 NC_007622.1 hypothetical protein 2498565 3792785 SAB2365c Staphylococcus aureus RF122 hypothetical protein YP_417816.1 2498278 R 273036 CDS YP_417817.1 82752076 3792786 complement(2498568..2498831) 1 NC_007622.1 hypothetical protein 2498831 3792786 SAB2366c Staphylococcus aureus RF122 hypothetical protein YP_417817.1 2498568 R 273036 CDS YP_417818.1 82752077 3792787 complement(2498894..2500219) 1 NC_007622.1 hypothetical protein 2500219 3792787 SAB2367c Staphylococcus aureus RF122 hypothetical protein YP_417818.1 2498894 R 273036 CDS YP_417819.1 82752078 3792789 complement(2501562..2502770) 1 NC_007622.1 DNA modification methylase 2502770 3792789 SAB2369c Staphylococcus aureus RF122 DNA modification methylase YP_417819.1 2501562 R 273036 CDS YP_417820.1 82752079 3792790 complement(2502840..2504432) 1 NC_007622.1 hypothetical protein 2504432 3792790 SAB2370c Staphylococcus aureus RF122 hypothetical protein YP_417820.1 2502840 R 273036 CDS YP_417821.1 82752080 3792791 2504564..2506327 1 NC_007622.1 phosphoglucomutase 2506327 3792791 SAB2371 Staphylococcus aureus RF122 phosphoglucomutase YP_417821.1 2504564 D 273036 CDS YP_417822.1 82752081 3792792 2506611..2506877 1 NC_007622.1 hypothetical protein 2506877 3792792 SAB2372 Staphylococcus aureus RF122 hypothetical protein YP_417822.1 2506611 D 273036 CDS YP_417823.1 82752082 3792793 2507022..2507330 1 NC_007622.1 hypothetical protein 2507330 3792793 SAB2373 Staphylococcus aureus RF122 hypothetical protein YP_417823.1 2507022 D 273036 CDS YP_417824.1 82752083 3794236 complement(2507457..2508323) 1 NC_007622.1 UTP-glucose-1-phosphate uridyltransferase 2508323 gtaB 3794236 gtaB Staphylococcus aureus RF122 UTP-glucose-1-phosphate uridyltransferase YP_417824.1 2507457 R 273036 CDS YP_417825.1 82752084 3794745 complement(2508503..2511475) 1 NC_007622.1 fibronectin-binding protein 2511475 fnbA 3794745 fnbA Staphylococcus aureus RF122 fibronectin-binding protein YP_417825.1 2508503 R 273036 CDS YP_417826.1 82752085 3792794 complement(2511675..2511884) 1 NC_007622.1 hypothetical protein 2511884 3792794 SAB2376c Staphylococcus aureus RF122 hypothetical protein YP_417826.1 2511675 R 273036 CDS YP_417827.1 82752086 3794227 complement(2511931..2513289) 1 NC_007622.1 gluconate permease 2513289 gntP 3794227 gntP Staphylococcus aureus RF122 gluconate permease YP_417827.1 2511931 R 273036 CDS YP_417828.1 82752087 3794226 complement(2513406..2514959) 1 NC_007622.1 gluconokinase 2514959 gntK 3794226 gntK Staphylococcus aureus RF122 gluconokinase YP_417828.1 2513406 R 273036 CDS YP_417829.1 82752088 3794228 complement(2514984..2515664) 1 NC_007622.1 gluconate operon transcriptional repressor 2515664 gntR 3794228 gntR Staphylococcus aureus RF122 gluconate operon transcriptional repressor YP_417829.1 2514984 R 273036 CDS YP_417830.1 82752089 3792795 complement(2515817..2516581) 1 NC_007622.1 MerR family transcriptional regulator 2516581 3792795 SAB2380c Staphylococcus aureus RF122 MerR family transcriptional regulator YP_417830.1 2515817 R 273036 CDS YP_417831.1 82752090 3792796 complement(2516746..2517438) 1 NC_007622.1 hypothetical protein 2517438 3792796 SAB2381c Staphylococcus aureus RF122 hypothetical protein YP_417831.1 2516746 R 273036 CDS YP_417832.1 82752091 3792797 complement(2517669..2518157) 1 NC_007622.1 hypothetical protein 2518157 3792797 SAB2382c Staphylococcus aureus RF122 hypothetical protein YP_417832.1 2517669 R 273036 CDS YP_417833.1 82752092 3792798 complement(2518225..2520225) 1 NC_007622.1 hypothetical protein 2520225 3792798 SAB2383c Staphylococcus aureus RF122 hypothetical protein YP_417833.1 2518225 R 273036 CDS YP_417834.1 82752093 3792799 complement(2520560..2520763) 1 NC_007622.1 hypothetical protein 2520763 3792799 SAB2384c Staphylococcus aureus RF122 hypothetical protein YP_417834.1 2520560 R 273036 CDS YP_417835.1 82752094 3792800 complement(2520959..2522236) 1 NC_007622.1 transport protein 2522236 3792800 SAB2385c Staphylococcus aureus RF122 transport protein YP_417835.1 2520959 R 273036 CDS YP_417836.1 82752095 3792801 2522783..2523394 1 NC_007622.1 alkaline phosphatase 2523394 3792801 SAB2386 Staphylococcus aureus RF122 alkaline phosphatase YP_417836.1 2522783 D 273036 CDS YP_417837.1 82752096 3792802 2523470..2523691 1 NC_007622.1 hypothetical protein 2523691 3792802 SAB2387 Staphylococcus aureus RF122 hypothetical protein YP_417837.1 2523470 D 273036 CDS YP_417838.1 82752097 3792726 2523912..2524607 1 NC_007622.1 ABC transporter 2524607 3792726 SAB2388 Staphylococcus aureus RF122 ABC transporter YP_417838.1 2523912 D 273036 CDS YP_417839.1 82752098 3792727 2524609..2525379 1 NC_007622.1 membrane-spanning protein 2525379 3792727 SAB2389 Staphylococcus aureus RF122 membrane-spanning protein YP_417839.1 2524609 D 273036 CDS YP_417840.1 82752099 3792728 2525882..2527846 1 NC_007622.1 fructose-bisphosphatase 2527846 3792728 SAB2390 Staphylococcus aureus RF122 fructose-bisphosphatase YP_417840.1 2525882 D 273036 CDS YP_417841.1 82752100 3792729 2528189..2529268 1 NC_007622.1 hypothetical protein 2529268 3792729 SAB2391 Staphylococcus aureus RF122 hypothetical protein YP_417841.1 2528189 D 273036 CDS YP_417842.1 82752101 3792730 complement(2529373..2529966) 1 NC_007622.1 hypothetical protein 2529966 3792730 SAB2392c Staphylococcus aureus RF122 hypothetical protein YP_417842.1 2529373 R 273036 CDS YP_417843.1 82752102 3792731 complement(2529988..2530956) 1 NC_007622.1 glyoxylase family protein 2530956 3792731 SAB2393c Staphylococcus aureus RF122 glyoxylase family protein YP_417843.1 2529988 R 273036 CDS YP_417844.1 82752103 3792732 complement(2531034..2531468) 1 NC_007622.1 MarR family transcriptional regulator 2531468 3792732 SAB2394c Staphylococcus aureus RF122 MarR family transcriptional regulator YP_417844.1 2531034 R 273036 CDS YP_417845.1 82752104 3792733 2531694..2531978 1 NC_007622.1 hypothetical protein 2531978 3792733 SAB2395 Staphylococcus aureus RF122 hypothetical protein YP_417845.1 2531694 D 273036 CDS YP_417846.1 82752105 3792734 2532153..2532959 1 NC_007622.1 hypothetical protein 2532959 3792734 SAB2396 Staphylococcus aureus RF122 hypothetical protein YP_417846.1 2532153 D 273036 CDS YP_417847.1 82752106 3792735 complement(2533078..2533749) 1 NC_007622.1 NADH-dependent flavin reductase 2533749 3792735 SAB2397c Staphylococcus aureus RF122 NADH-dependent flavin reductase YP_417847.1 2533078 R 273036 CDS YP_417848.1 82752107 3795293 2533956..2534765 1 NC_007622.1 D-lactate dehydrogenase 2534765 ddh 3795293 ddh Staphylococcus aureus RF122 D-lactate dehydrogenase YP_417848.1 2533956 D 273036 CDS YP_417849.1 82752108 3792736 complement(2535012..2535812) 1 NC_007622.1 hypothetical protein 2535812 3792736 SAB2399c Staphylococcus aureus RF122 hypothetical protein YP_417849.1 2535012 R 273036 CDS YP_417850.1 82752109 3792737 2536133..2536768 1 NC_007622.1 ABC transporter ATP-binding protein 2536768 3792737 SAB2400 Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_417850.1 2536133 D 273036 CDS YP_417851.1 82752110 3792738 2536783..2537505 1 NC_007622.1 hypothetical protein 2537505 3792738 SAB2401 Staphylococcus aureus RF122 hypothetical protein YP_417851.1 2536783 D 273036 CDS YP_417852.1 82752111 3793012 complement(2537666..2538286) 1 NC_007622.1 sortase 2538286 srtA 3793012 srtA Staphylococcus aureus RF122 sortase YP_417852.1 2537666 R 273036 CDS YP_417853.1 82752112 3792739 2538480..2538971 1 NC_007622.1 phosphinothricin N-acetyltransferase 2538971 3792739 SAB2403 Staphylococcus aureus RF122 phosphinothricin N-acetyltransferase YP_417853.1 2538480 D 273036 CDS YP_417854.1 82752113 3792740 complement(2539469..2540368) 1 NC_007622.1 L-serine dehydratase alpha subunit 2540368 3792740 SAB2404c Staphylococcus aureus RF122 L-serine dehydratase alpha subunit YP_417854.1 2539469 R 273036 CDS YP_417855.1 82752114 3792741 complement(2540382..2541062) 1 NC_007622.1 L-serine dehydratase beta subunit 2541062 3792741 SAB2405c Staphylococcus aureus RF122 L-serine dehydratase beta subunit YP_417855.1 2540382 R 273036 CDS YP_417856.1 82752115 3792742 complement(2541065..2542108) 1 NC_007622.1 surface-exposed regulatory protein 2542108 3792742 SAB2406c Staphylococcus aureus RF122 surface-exposed regulatory protein YP_417856.1 2541065 R 273036 CDS YP_417857.1 82752116 3792743 2542989..2543153 1 NC_007622.1 hypothetical protein 2543153 3792743 SAB2407 Staphylococcus aureus RF122 hypothetical protein YP_417857.1 2542989 D 273036 CDS YP_417858.1 82752117 3792744 2543199..2543951 1 NC_007622.1 hypothetical protein 2543951 3792744 SAB2408 Staphylococcus aureus RF122 hypothetical protein YP_417858.1 2543199 D 273036 CDS YP_417859.1 82752118 3792745 complement(2544031..2544999) 1 NC_007622.1 hypothetical protein 2544999 3792745 SAB2409c Staphylococcus aureus RF122 hypothetical protein YP_417859.1 2544031 R 273036 CDS YP_417860.1 82752119 3794184 complement(2545132..2545476) 1 NC_007622.1 hypothetical protein 2545476 3794184 SAB2410c Staphylococcus aureus RF122 hypothetical protein YP_417860.1 2545132 R 273036 CDS YP_417861.1 82752120 3794185 complement(2545518..2545928) 1 NC_007622.1 hypothetical protein 2545928 3794185 SAB2411c Staphylococcus aureus RF122 hypothetical protein YP_417861.1 2545518 R 273036 CDS YP_417862.1 82752121 3793643 complement(2546308..2548374) 1 NC_007622.1 PTS system glucose-specific IIABC component 2548374 glcB 3793643 glcB Staphylococcus aureus RF122 PTS system glucose-specific IIABC component YP_417862.1 2546308 R 273036 CDS YP_417863.1 82752122 3794186 complement(2548674..2550413) 1 NC_007622.1 catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase 2550413 3794186 SAB2413c Staphylococcus aureus RF122 pyruvate oxidase YP_417863.1 2548674 R 273036 CDS YP_417864.1 82752123 3794187 complement(2550453..2551142) 1 NC_007622.1 hypothetical protein 2551142 3794187 SAB2414c Staphylococcus aureus RF122 hypothetical protein YP_417864.1 2550453 R 273036 CDS YP_417865.1 82752124 3794189 complement(2551743..2552627) 1 NC_007622.1 LysR family transcriptional regulator 2552627 3794189 SAB2416c Staphylococcus aureus RF122 LysR family transcriptional regulator YP_417865.1 2551743 R 273036 CDS YP_417866.1 82752125 3794190 2552788..2553006 1 NC_007622.1 hypothetical protein 2553006 3794190 SAB2417 Staphylococcus aureus RF122 hypothetical protein YP_417866.1 2552788 D 273036 CDS YP_417867.1 82752126 3794191 2553396..2553827 1 NC_007622.1 secretory antigen SsaA-like protein 2553827 3794191 SAB2418 Staphylococcus aureus RF122 secretory antigen SsaA-like protein YP_417867.1 2553396 D 273036 CDS YP_417868.1 82752127 3794135 complement(2553966..2555246) 1 NC_007622.1 hydroxymethylglutaryl-CoA reductase 2555246 mvaA 3794135 mvaA Staphylococcus aureus RF122 hydroxymethylglutaryl-CoA reductase YP_417868.1 2553966 R 273036 CDS YP_417869.1 82752128 3794139 2555500..2556666 1 NC_007622.1 3-hydroxy-3-methylglutaryl CoA synthase 2556666 mvaS 3794139 mvaS Staphylococcus aureus RF122 3-hydroxy-3-methylglutaryl CoA synthase YP_417869.1 2555500 D 273036 CDS YP_417870.1 82752129 3794192 complement(2556895..2557560) 1 NC_007622.1 similar to streptococcal exotoxin G; hypothetical protein 2557560 3794192 SAB2421c Staphylococcus aureus RF122 hypothetical protein YP_417870.1 2556895 R 273036 CDS YP_417871.1 82752130 3794828 complement(2557761..2558282) 1 NC_007622.1 methylated-DNA-protein-cysteine S-methyltransferase 2558282 adaB 3794828 adaB Staphylococcus aureus RF122 methylated-DNA-protein-cysteine S-methyltransferase YP_417871.1 2557761 R 273036 CDS YP_417872.1 82752131 3794834 2558644..2560752 1 NC_007622.1 ATP-dependent proteinase chain 2560752 clpL 3794834 clpL Staphylococcus aureus RF122 ATP-dependent proteinase chain YP_417872.1 2558644 D 273036 CDS YP_417873.1 82752132 3794732 complement(2561002..2562996) 1 NC_007622.1 ferrous iron transport protein B 2562996 feoB 3794732 feoB Staphylococcus aureus RF122 ferrous iron transport protein B YP_417873.1 2561002 R 273036 CDS YP_417874.1 82752133 3794193 complement(2563008..2563235) 1 NC_007622.1 hypothetical protein 2563235 3794193 SAB2425c Staphylococcus aureus RF122 hypothetical protein YP_417874.1 2563008 R 273036 CDS YP_417875.1 82752134 3794194 complement(2563452..2565941) 1 NC_007622.1 membrane transporter 2565941 3794194 SAB2426c Staphylococcus aureus RF122 membrane transporter YP_417875.1 2563452 R 273036 CDS YP_417876.1 82752135 3794195 2566085..2566633 1 NC_007622.1 hypothetical protein 2566633 3794195 SAB2427 Staphylococcus aureus RF122 hypothetical protein YP_417876.1 2566085 D 273036 CDS YP_417877.1 82752136 3794196 complement(2566988..2568532) 1 NC_007622.1 catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; 1-pyrroline-5-carboxylate dehydrogenase 2568532 3794196 SAB2428c Staphylococcus aureus RF122 1-pyrroline-5-carboxylate dehydrogenase YP_417877.1 2566988 R 273036 CDS YP_417878.1 82752137 3794197 complement(2568722..2569303) 1 NC_007622.1 galactoside-O-acetyltransferase 2569303 3794197 SAB2429c Staphylococcus aureus RF122 galactoside-O-acetyltransferase YP_417878.1 2568722 R 273036 CDS YP_417879.1 82752138 3794198 2569548..2569748 1 NC_007622.1 hypothetical protein 2569748 3794198 SAB2430 Staphylococcus aureus RF122 hypothetical protein YP_417879.1 2569548 D 273036 CDS YP_417880.1 82752139 3794843 2569988..2572396 1 NC_007622.1 copper-transporting ATPase 2572396 copA 3794843 copA Staphylococcus aureus RF122 copper-transporting ATPase YP_417880.1 2569988 D 273036 CDS YP_417881.1 82752140 3794199 complement(2572845..2573843) 1 NC_007622.1 catalyzes the formation of pyruvate from lactate; D-lactate dehydrogenase 2573843 3794199 SAB2432c Staphylococcus aureus RF122 D-lactate dehydrogenase YP_417881.1 2572845 R 273036 CDS YP_417882.1 82752141 3794200 complement(2573866..2575020) 1 NC_007622.1 aminotransferase 2575020 3794200 SAB2433c Staphylococcus aureus RF122 aminotransferase YP_417882.1 2573866 R 273036 CDS YP_417883.1 82752142 3794847 complement(2575447..2576955) 1 NC_007622.1 squalene synthase 2576955 crtN 3794847 crtN Staphylococcus aureus RF122 squalene synthase YP_417883.1 2575447 R 273036 CDS YP_417884.1 82752143 3794846 complement(2576967..2577830) 1 NC_007622.1 squalene desaturase 2577830 crtM 3794846 crtM Staphylococcus aureus RF122 squalene desaturase YP_417884.1 2576967 R 273036 CDS YP_417885.1 82752144 3794201 complement(2577867..2578994) 1 NC_007622.1 hypothetical protein 2578994 3794201 SAB2436c Staphylococcus aureus RF122 hypothetical protein YP_417885.1 2577867 R 273036 CDS YP_417886.1 82752145 3794202 complement(2579000..2580493) 1 NC_007622.1 phytoene dehydrogenase 2580493 3794202 SAB2437c Staphylococcus aureus RF122 phytoene dehydrogenase YP_417886.1 2579000 R 273036 CDS YP_417887.1 82752146 3794438 complement(2580486..2580983) 1 NC_007622.1 hypothetical protein 2580983 3794438 SAB2438c Staphylococcus aureus RF122 hypothetical protein YP_417887.1 2580486 R 273036 CDS YP_417888.1 82752147 3793014 complement(2581149..2581916) 1 NC_007622.1 secretory antigen precursor 2581916 ssaA 3793014 ssaA Staphylococcus aureus RF122 secretory antigen precursor YP_417888.1 2581149 R 273036 CDS YP_417889.1 82752148 3794439 complement(2582028..2582174) 1 NC_007622.1 hypothetical protein 2582174 3794439 SAB2440c Staphylococcus aureus RF122 hypothetical protein YP_417889.1 2582028 R 273036 CDS YP_417890.1 82752149 3794440 complement(2582277..2584088) 1 NC_007622.1 membrane-embedded acyltransferase 2584088 3794440 SAB2441c Staphylococcus aureus RF122 membrane-embedded acyltransferase YP_417890.1 2582277 R 273036 CDS YP_417891.1 82752150 3794441 complement(2584592..2585080) 1 NC_007622.1 acetyltransferase 2585080 3794441 SAB2442c Staphylococcus aureus RF122 acetyltransferase YP_417891.1 2584592 R 273036 CDS YP_417892.1 82752151 3795265 complement(2585356..2586057) 1 NC_007622.1 immunodominant antigen A 2586057 isaA 3795265 isaA Staphylococcus aureus RF122 immunodominant antigen A YP_417892.1 2585356 R 273036 CDS YP_417893.1 82752152 3794442 complement(2586665..2587720) 1 NC_007622.1 hypothetical protein 2587720 3794442 SAB2444c Staphylococcus aureus RF122 hypothetical protein YP_417893.1 2586665 R 273036 CDS YP_417894.1 82752153 3794443 2588130..2588699 1 NC_007622.1 TetR family regulatory protein 2588699 3794443 SAB2445 Staphylococcus aureus RF122 TetR family regulatory protein YP_417894.1 2588130 D 273036 CDS YP_417895.1 82752154 3794444 2588897..2589397 1 NC_007622.1 hypothetical protein 2589397 3794444 SAB2446 Staphylococcus aureus RF122 hypothetical protein YP_417895.1 2588897 D 273036 CDS YP_417896.1 82752155 3794445 2589617..2589847 1 NC_007622.1 hypothetical protein 2589847 3794445 SAB2447 Staphylococcus aureus RF122 hypothetical protein YP_417896.1 2589617 D 273036 CDS YP_417897.1 82752156 3794446 complement(2589978..2590355) 1 NC_007622.1 hypothetical protein 2590355 3794446 SAB2448c Staphylococcus aureus RF122 hypothetical protein YP_417897.1 2589978 R 273036 CDS YP_417898.1 82752157 3794447 complement(2590372..2590926) 1 NC_007622.1 hypothetical protein 2590926 3794447 SAB2449c Staphylococcus aureus RF122 hypothetical protein YP_417898.1 2590372 R 273036 CDS YP_417899.1 82752158 3794448 complement(2590935..2591195) 1 NC_007622.1 hypothetical protein 2591195 3794448 SAB2450c Staphylococcus aureus RF122 hypothetical protein YP_417899.1 2590935 R 273036 CDS YP_417900.1 82752159 3794449 complement(2591214..2591513) 1 NC_007622.1 hypothetical protein 2591513 3794449 SAB2451c Staphylococcus aureus RF122 hypothetical protein YP_417900.1 2591214 R 273036 CDS YP_417901.1 82752160 3794450 2591644..2592201 1 NC_007622.1 hypothetical protein 2592201 3794450 SAB2452 Staphylococcus aureus RF122 hypothetical protein YP_417901.1 2591644 D 273036 CDS YP_417902.1 82752161 3794451 2592194..2592898 1 NC_007622.1 short chain oxidoreductase 2592898 3794451 SAB2453 Staphylococcus aureus RF122 short chain oxidoreductase YP_417902.1 2592194 D 273036 CDS YP_417903.1 82752162 3794453 2594021..2594851 1 NC_007622.1 hypothetical protein 2594851 3794453 SAB2455 Staphylococcus aureus RF122 hypothetical protein YP_417903.1 2594021 D 273036 CDS YP_417904.1 82752163 3794454 complement(2594998..2595888) 1 NC_007622.1 cobalmin synthesis protein 2595888 3794454 SAB2456c Staphylococcus aureus RF122 cobalmin synthesis protein YP_417904.1 2594998 R 273036 CDS YP_417905.1 82752164 3794455 complement(2595988..2597328) 1 NC_007622.1 hypothetical protein 2597328 3794455 SAB2457c Staphylococcus aureus RF122 hypothetical protein YP_417905.1 2595988 R 273036 CDS YP_417906.1 82752165 3794456 complement(2597322..2598428) 1 NC_007622.1 hypothetical protein 2598428 3794456 SAB2458c Staphylococcus aureus RF122 hypothetical protein YP_417906.1 2597322 R 273036 CDS YP_417907.1 82752166 3794457 complement(2598488..2598661) 1 NC_007622.1 hypothetical protein 2598661 3794457 SAB2459c Staphylococcus aureus RF122 hypothetical protein YP_417907.1 2598488 R 273036 CDS YP_417908.1 82752167 3795003 complement(2598764..2599060) 1 NC_007622.1 hypothetical protein 2599060 3795003 SAB2460c Staphylococcus aureus RF122 hypothetical protein YP_417908.1 2598764 R 273036 CDS YP_417909.1 82752168 3795004 complement(2599048..2599416) 1 NC_007622.1 hypothetical protein 2599416 3795004 SAB2461c Staphylococcus aureus RF122 hypothetical protein YP_417909.1 2599048 R 273036 CDS YP_417910.1 82752169 3795005 complement(2599431..2599706) 1 NC_007622.1 hypothetical protein 2599706 3795005 SAB2462c Staphylococcus aureus RF122 hypothetical protein YP_417910.1 2599431 R 273036 CDS YP_417911.1 82752170 3795006 complement(2600046..2600912) 1 NC_007622.1 hypothetical protein 2600912 3795006 SAB2463c Staphylococcus aureus RF122 hypothetical protein YP_417911.1 2600046 R 273036 CDS YP_417912.1 82752171 3795007 2601130..2602194 1 NC_007622.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2602194 3795007 SAB2464 Staphylococcus aureus RF122 dihydroorotate dehydrogenase 2 YP_417912.1 2601130 D 273036 CDS YP_417913.1 82752172 3795008 2602349..2602624 1 NC_007622.1 hypothetical protein 2602624 3795008 SAB2465 Staphylococcus aureus RF122 hypothetical protein YP_417913.1 2602349 D 273036 CDS YP_417914.1 82752173 3795009 complement(2602810..2603532) 1 NC_007622.1 hypothetical protein 2603532 3795009 SAB2466c Staphylococcus aureus RF122 hypothetical protein YP_417914.1 2602810 R 273036 CDS YP_417915.1 82752174 3795010 2603882..2604331 1 NC_007622.1 hypothetical protein 2604331 3795010 SAB2467 Staphylococcus aureus RF122 hypothetical protein YP_417915.1 2603882 D 273036 CDS YP_417916.1 82752175 3795011 complement(2604412..2604999) 1 NC_007622.1 hypothetical protein 2604999 3795011 SAB2468c Staphylococcus aureus RF122 hypothetical protein YP_417916.1 2604412 R 273036 CDS YP_417917.1 82752176 3795012 2605142..2606824 1 NC_007622.1 hypothetical protein 2606824 3795012 SAB2469 Staphylococcus aureus RF122 hypothetical protein YP_417917.1 2605142 D 273036 CDS YP_417918.1 82752177 3794115 complement(2606953..2607336) 1 NC_007622.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2607336 panD 3794115 panD Staphylococcus aureus RF122 aspartate alpha-decarboxylase YP_417918.1 2606953 R 273036 CDS YP_417919.1 82752178 3794114 complement(2607338..2608189) 1 NC_007622.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2608189 panC 3794114 panC Staphylococcus aureus RF122 pantoate--beta-alanine ligase YP_417919.1 2607338 R 273036 CDS YP_417920.1 82752179 3794113 complement(2608182..2609000) 1 NC_007622.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2609000 panB 3794113 panB Staphylococcus aureus RF122 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_417920.1 2608182 R 273036 CDS YP_417921.1 82752180 3795013 2609073..2609933 1 NC_007622.1 2-dehydropantoate 2-reductase 2609933 3795013 SAB2473 Staphylococcus aureus RF122 2-dehydropantoate 2-reductase YP_417921.1 2609073 D 273036 CDS YP_417922.1 82752181 3795014 complement(2610019..2610723) 1 NC_007622.1 alpha-acetolactate decarboxylase 2610723 3795014 SAB2474c Staphylococcus aureus RF122 alpha-acetolactate decarboxylase YP_417922.1 2610019 R 273036 CDS YP_417923.1 82752182 3794802 complement(2611001..2611960) 1 NC_007622.1 L-lactate dehydrogenase 2611960 ldh 3794802 ldh Staphylococcus aureus RF122 L-lactate dehydrogenase YP_417923.1 2611001 R 273036 CDS YP_417924.1 82752183 3795015 2612647..2614095 1 NC_007622.1 cationic amino acid transporter 2614095 3795015 SAB2476 Staphylococcus aureus RF122 cationic amino acid transporter YP_417924.1 2612647 D 273036 CDS YP_417925.1 82752184 3795017 2615766..2616182 1 NC_007622.1 hypothetical protein 2616182 3795017 SAB2478 Staphylococcus aureus RF122 hypothetical protein YP_417925.1 2615766 D 273036 CDS YP_417926.1 82752185 3793365 2616305..2617195 1 NC_007622.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 2617195 fda 3793365 fda Staphylococcus aureus RF122 fructose-1,6-bisphosphate aldolase YP_417926.1 2616305 D 273036 CDS YP_417927.1 82752186 3793456 complement(2617390..2618886) 1 NC_007622.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 2618886 mqo 3793456 mqo Staphylococcus aureus RF122 malate:quinone oxidoreductase YP_417927.1 2617390 R 273036 CDS YP_417928.1 82752187 3795018 2619263..2619511 1 NC_007622.1 hypothetical protein 2619511 3795018 SAB2481 Staphylococcus aureus RF122 hypothetical protein YP_417928.1 2619263 D 273036 CDS YP_417929.1 82752188 3795019 complement(2619571..2621190) 1 NC_007622.1 acetate-CoA ligase 2621190 3795019 SAB2482c Staphylococcus aureus RF122 acetate-CoA ligase YP_417929.1 2619571 R 273036 CDS YP_417930.1 82752189 3795020 complement(2621363..2621806) 1 NC_007622.1 hypothetical protein 2621806 3795020 SAB2483c Staphylococcus aureus RF122 hypothetical protein YP_417930.1 2621363 R 273036 CDS YP_417931.1 82752190 3795021 complement(2621844..2622011) 1 NC_007622.1 hypothetical protein 2622011 3795021 SAB2484c Staphylococcus aureus RF122 hypothetical protein YP_417931.1 2621844 R 273036 CDS YP_417932.1 82752191 3793986 complement(2622086..2622298) 1 NC_007622.1 hypothetical protein 2622298 3793986 SAB2485c Staphylococcus aureus RF122 hypothetical protein YP_417932.1 2622086 R 273036 CDS YP_417933.1 82752192 3795281 complement(2622578..2624287) 1 NC_007622.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 2624287 cudB 3795281 cudB Staphylococcus aureus RF122 choline dehydrogenase YP_417933.1 2622578 R 273036 CDS YP_417934.1 82752193 3795280 complement(2624548..2626038) 1 NC_007622.1 glycine betaine aldehyde dehydrogenase 2626038 cudA 3795280 cudA Staphylococcus aureus RF122 glycine betaine aldehyde dehydrogenase YP_417934.1 2624548 R 273036 CDS YP_417935.1 82752194 3793987 2626270..2626854 1 NC_007622.1 hypothetical protein 2626854 3793987 SAB2488 Staphylococcus aureus RF122 hypothetical protein YP_417935.1 2626270 D 273036 CDS YP_417936.1 82752195 3795282 complement(2627024..2628646) 1 NC_007622.1 choline transporter 2628646 cudT 3795282 cudT Staphylococcus aureus RF122 choline transporter YP_417936.1 2627024 R 273036 CDS YP_417937.1 82752196 3793625 complement(2629163..2629699) 1 NC_007622.1 anaerobic ribonucleotide reductase small subunit 2629699 nrdG 3793625 nrdG Staphylococcus aureus RF122 anaerobic ribonucleotide reductase small subunit YP_417937.1 2629163 R 273036 CDS YP_417938.1 82752197 3793624 complement(2629696..2631546) 1 NC_007622.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2631546 nrdD 3793624 nrdD Staphylococcus aureus RF122 anaerobic ribonucleoside triphosphate reductase YP_417938.1 2629696 R 273036 CDS YP_417939.1 82752198 3793988 complement(2631793..2633163) 1 NC_007622.1 magnesium citrate secondary transporter 2633163 3793988 SAB2492c Staphylococcus aureus RF122 magnesium citrate secondary transporter YP_417939.1 2631793 R 273036 CDS YP_417940.1 82752199 3793989 complement(2633637..2634242) 1 NC_007622.1 catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 2634242 3793989 SAB2493c Staphylococcus aureus RF122 precorrin-2 dehydrogenase YP_417940.1 2633637 R 273036 CDS YP_417941.1 82752200 3795285 complement(2634305..2636185) 1 NC_007622.1 sulfite reductase flavoprotein 2636185 cysJ 3795285 cysJ Staphylococcus aureus RF122 sulfite reductase flavoprotein YP_417941.1 2634305 R 273036 CDS YP_417942.1 82752201 3793990 complement(2636580..2637077) 1 NC_007622.1 glutathione peroxidase 2637077 3793990 SAB2495c Staphylococcus aureus RF122 glutathione peroxidase YP_417942.1 2636580 R 273036 CDS YP_417943.1 82752202 3793991 complement(2637087..2637347) 1 NC_007622.1 hypothetical protein 2637347 3793991 SAB2496c Staphylococcus aureus RF122 hypothetical protein YP_417943.1 2637087 R 273036 CDS YP_417944.1 82752203 3793992 complement(2638501..2640501) 1 NC_007622.1 hypothetical protein 2640501 3793992 SAB2497c Staphylococcus aureus RF122 hypothetical protein YP_417944.1 2638501 R 273036 CDS YP_417945.1 82752204 3793993 complement(2640498..2641253) 1 NC_007622.1 ABC transporter ATP-binding protein 2641253 3793993 SAB2498c Staphylococcus aureus RF122 ABC transporter ATP-binding protein YP_417945.1 2640498 R 273036 CDS YP_417946.1 82752205 3793994 complement(2641361..2642248) 1 NC_007622.1 two-component sensor histidine kinase 2642248 3793994 SAB2499c Staphylococcus aureus RF122 two-component sensor histidine kinase YP_417946.1 2641361 R 273036 CDS YP_417947.1 82752206 3793995 complement(2642259..2642924) 1 NC_007622.1 two-component sensor response regulator 2642924 3793995 SAB2500c Staphylococcus aureus RF122 two-component sensor response regulator YP_417947.1 2642259 R 273036 CDS YP_417948.1 82752207 3793996 complement(2642950..2643150) 1 NC_007622.1 hypothetical protein 2643150 3793996 SAB2501c Staphylococcus aureus RF122 hypothetical protein YP_417948.1 2642950 R 273036 CDS YP_417949.1 82752208 3794471 2643348..2644772 1 NC_007622.1 alkaline phosphatase III precursor 2644772 phoB 3794471 phoB Staphylococcus aureus RF122 alkaline phosphatase III precursor YP_417949.1 2643348 D 273036 CDS YP_417950.1 82752209 3793997 complement(2645055..2645510) 1 NC_007622.1 MarR family transcriptional regulator 2645510 3793997 SAB2503c Staphylococcus aureus RF122 MarR family transcriptional regulator YP_417950.1 2645055 R 273036 CDS YP_417951.1 82752210 3793998 complement(2645755..2646516) 1 NC_007622.1 tributyrin esterase 2646516 3793998 SAB2504c Staphylococcus aureus RF122 tributyrin esterase YP_417951.1 2645755 R 273036 CDS YP_417952.1 82752211 3794831 complement(2646630..2649215) 1 NC_007622.1 clumping factor B 2649215 clfB 3794831 clfB Staphylococcus aureus RF122 clumping factor B YP_417952.1 2646630 R 273036 CDS YP_417953.1 82752212 3793999 complement(2649565..2650269) 1 NC_007622.1 transcriptional regulator 2650269 3793999 SAB2506c Staphylococcus aureus RF122 transcriptional regulator YP_417953.1 2649565 R 273036 CDS YP_417954.2 161777615 3794904 complement(2650368..2651309) 1 NC_007622.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2651309 arcC 3794904 arcC Staphylococcus aureus RF122 carbamate kinase YP_417954.2 2650368 R 273036 CDS YP_417955.1 82752214 3794905 complement(2651326..2652756) 1 NC_007622.1 arginine-ornithine antiporter 2652756 arcD 3794905 arcD Staphylococcus aureus RF122 arginine-ornithine antiporter YP_417955.1 2651326 R 273036 CDS YP_417956.1 82752215 3794903 complement(2652847..2653857) 1 NC_007622.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 2653857 arcB 3794903 arcB Staphylococcus aureus RF122 ornithine carbamoyltransferase YP_417956.1 2652847 R 273036 CDS YP_417957.1 82752216 3794902 complement(2653890..2655125) 1 NC_007622.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 2655125 arcA 3794902 arcA Staphylococcus aureus RF122 arginine deiminase YP_417957.1 2653890 R 273036 CDS YP_417958.1 82752217 3794947 complement(2655472..2655921) 1 NC_007622.1 arginine repressor 2655921 argR 3794947 argR Staphylococcus aureus RF122 arginine repressor YP_417958.1 2655472 R 273036 CDS YP_417959.1 82752218 3792656 complement(2656287..2657816) 1 NC_007622.1 zinc metalloproteinase aureolysin 2657816 aur 3792656 aur Staphylococcus aureus RF122 zinc metalloproteinase aureolysin YP_417959.1 2656287 R 273036 CDS YP_417960.1 82752219 3795266 complement(2658240..2658767) 1 NC_007622.1 immunodominant antigen B 2658767 isaB 3795266 isaB Staphylococcus aureus RF122 immunodominant antigen B YP_417960.1 2658240 R 273036 CDS YP_417961.1 82752220 3794000 2659025..2659483 1 NC_007622.1 hypothetical protein 2659483 3794000 SAB2514 Staphylococcus aureus RF122 hypothetical protein YP_417961.1 2659025 D 273036 CDS YP_417962.1 82752221 3794001 2659723..2661597 1 NC_007622.1 antiterminator transcriptional regulator 2661597 3794001 SAB2515 Staphylococcus aureus RF122 antiterminator transcriptional regulator YP_417962.1 2659723 D 273036 CDS YP_417963.1 82752222 3794002 2661673..2663625 1 NC_007622.1 PTS system fructose-specific II component 2663625 3794002 SAB2516 Staphylococcus aureus RF122 PTS system fructose-specific II component YP_417963.1 2661673 D 273036 CDS YP_417964.1 82752223 3794476 2663639..2664577 1 NC_007622.1 mannose-6-phosphate isomerase 2664577 pmi 3794476 pmi Staphylococcus aureus RF122 mannose-6-phosphate isomerase YP_417964.1 2663639 D 273036 CDS YP_417965.1 82752224 3794003 complement(2664689..2667664) 1 NC_007622.1 hypothetical protein 2667664 3794003 SAB2518c Staphylococcus aureus RF122 hypothetical protein YP_417965.1 2664689 R 273036 CDS YP_417966.1 82752225 3794004 2667875..2669734 1 NC_007622.1 N-acetylmuramoyl-L-alanine amidase 2669734 3794004 SAB2519 Staphylococcus aureus RF122 N-acetylmuramoyl-L-alanine amidase YP_417966.1 2667875 D 273036 CDS YP_417967.1 82752226 3794005 complement(2670001..2670561) 1 NC_007622.1 hypothetical protein 2670561 3794005 SAB2520c Staphylococcus aureus RF122 hypothetical protein YP_417967.1 2670001 R 273036 CDS YP_417968.1 82752227 3793967 complement(2670733..2672628) 1 NC_007622.1 surface anchored protein 2672628 3793967 SAB2521c Staphylococcus aureus RF122 surface anchored protein YP_417968.1 2670733 R 273036 CDS YP_417969.1 82752228 3793968 complement(2672870..2674228) 1 NC_007622.1 hypothetical protein 2674228 3793968 SAB2522c Staphylococcus aureus RF122 hypothetical protein YP_417969.1 2672870 R 273036 CDS YP_417970.1 82752229 3793969 complement(2674221..2675729) 1 NC_007622.1 glycosyl transferase 2675729 3793969 SAB2523c Staphylococcus aureus RF122 glycosyl transferase YP_417970.1 2674221 R 273036 CDS YP_417971.1 82752230 3793971 complement(2678127..2679086) 1 NC_007622.1 hypothetical protein 2679086 3793971 SAB2525c Staphylococcus aureus RF122 hypothetical protein YP_417971.1 2678127 R 273036 CDS YP_417972.1 82752231 3793972 complement(2679064..2680632) 1 NC_007622.1 hypothetical protein 2680632 3793972 SAB2526c Staphylococcus aureus RF122 hypothetical protein YP_417972.1 2679064 R 273036 CDS YP_417973.1 82752232 3793973 complement(2680622..2682175) 1 NC_007622.1 hypothetical protein 2682175 3793973 SAB2527c Staphylococcus aureus RF122 hypothetical protein YP_417973.1 2680622 R 273036 CDS YP_417974.1 82752233 3793974 complement(2682186..2683232) 1 NC_007622.1 preprotein translocase subunit SecY 2683232 3793974 SAB2528c Staphylococcus aureus RF122 preprotein translocase subunit SecY YP_417974.1 2682186 R 273036 CDS YP_417975.1 82752234 3793977 2689915..2690859 1 NC_007622.1 lipoprotein 2690859 3793977 SAB2531 Staphylococcus aureus RF122 lipoprotein YP_417975.1 2689915 D 273036 CDS YP_417976.1 82752235 3793978 2690843..2691148 1 NC_007622.1 hypothetical protein 2691148 3793978 SAB2532 Staphylococcus aureus RF122 hypothetical protein YP_417976.1 2690843 D 273036 CDS YP_417977.1 82752236 3793979 2691297..2691656 1 NC_007622.1 hypothetical protein 2691656 3793979 SAB2533 Staphylococcus aureus RF122 hypothetical protein YP_417977.1 2691297 D 273036 CDS YP_417978.1 82752237 3793980 complement(2691741..2692352) 1 NC_007622.1 hypothetical protein 2692352 3793980 SAB2534c Staphylococcus aureus RF122 hypothetical protein YP_417978.1 2691741 R 273036 CDS YP_417979.1 82752238 3793981 complement(2692431..2692907) 1 NC_007622.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase A 2692907 3793981 SAB2535c Staphylococcus aureus RF122 methionine sulfoxide reductase A YP_417979.1 2692431 R 273036 CDS YP_417980.1 82752239 3793982 complement(2692910..2693410) 1 NC_007622.1 acetyltransferase 2693410 3793982 SAB2536c Staphylococcus aureus RF122 acetyltransferase YP_417980.1 2692910 R 273036 CDS YP_417981.1 82752240 3793983 complement(2693645..2694412) 1 NC_007622.1 capsular polysaccharide biosynthesis protein 2694412 3793983 SAB2537c Staphylococcus aureus RF122 capsular polysaccharide biosynthesis protein YP_417981.1 2693645 R 273036 CDS YP_417982.1 82752241 3793984 complement(2694409..2695101) 1 NC_007622.1 capsular polysaccharide biosynthesis protein 2695101 3793984 SAB2538c Staphylococcus aureus RF122 capsular polysaccharide biosynthesis protein YP_417982.1 2694409 R 273036 CDS YP_417983.1 82752242 3793985 complement(2695118..2695804) 1 NC_007622.1 capsular polysaccharide biosynthesis protein 2695804 3793985 SAB2539c Staphylococcus aureus RF122 capsular polysaccharide biosynthesis protein YP_417983.1 2695118 R 273036 CDS YP_417984.1 82752243 3795256 complement(2696628..2697188) 1 NC_007622.1 ica operon transcription regulator 2697188 icaR 3795256 icaR Staphylococcus aureus RF122 ica operon transcription regulator YP_417984.1 2696628 R 273036 CDS YP_417985.1 82752244 3794101 2697352..2698590 1 NC_007622.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 2698590 icaA 3794101 icaA Staphylococcus aureus RF122 N-glycosyltransferase YP_417985.1 2697352 D 273036 CDS YP_417986.1 82752245 3794104 2698541..2698858 1 NC_007622.1 intercellular adhesion protein D 2698858 icaD 3794104 icaD Staphylococcus aureus RF122 intercellular adhesion protein D YP_417986.1 2698541 D 273036 CDS YP_417987.1 82752246 3794102 2698855..2699727 1 NC_007622.1 intercellular adhesion protein B 2699727 icaB 3794102 icaB Staphylococcus aureus RF122 intercellular adhesion protein B YP_417987.1 2698855 D 273036 CDS YP_417988.1 82752247 3794103 2699714..2700766 1 NC_007622.1 intercellular adhesion protein C 2700766 icaC 3794103 icaC Staphylococcus aureus RF122 intercellular adhesion protein C YP_417988.1 2699714 D 273036 CDS YP_417989.1 82752248 3794692 complement(2700775..2700930) 1 NC_007622.1 hypothetical protein 2700930 3794692 SAB2545c Staphylococcus aureus RF122 hypothetical protein YP_417989.1 2700775 R 273036 CDS YP_417990.1 82752249 3794752 complement(2701076..2703121) 1 NC_007622.1 triacylglycerol lipase precursor 2703121 lip 3794752 lip Staphylococcus aureus RF122 triacylglycerol lipase precursor YP_417990.1 2701076 R 273036 CDS YP_417991.1 82752250 3794693 complement(2703841..2704104) 1 NC_007622.1 hypothetical protein 2704104 3794693 SAB2547c Staphylococcus aureus RF122 hypothetical protein YP_417991.1 2703841 R 273036 CDS YP_417992.1 82752251 3794919 complement(2704640..2705272) 1 NC_007622.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 2705272 hisIE 3794919 hisIE Staphylococcus aureus RF122 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_417992.1 2704640 R 273036 CDS YP_417993.1 82752252 3794916 complement(2705269..2706027) 1 NC_007622.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2706027 hisF 3794916 hisF Staphylococcus aureus RF122 imidazole glycerol phosphate synthase subunit HisF YP_417993.1 2705269 R 273036 CDS YP_417994.1 82752253 3794913 complement(2706024..2706728) 1 NC_007622.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-hosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2706728 hisA 3794913 hisA Staphylococcus aureus RF122 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_417994.1 2706024 R 273036 CDS YP_417995.1 82752254 3794918 complement(2706721..2707299) 1 NC_007622.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2707299 hisH 3794918 hisH Staphylococcus aureus RF122 imidazole glycerol phosphate synthase subunit HisH YP_417995.1 2706721 R 273036 CDS YP_417996.1 82752255 3794914 complement(2707296..2707874) 1 NC_007622.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 2707874 hisB 3794914 hisB Staphylococcus aureus RF122 imidazoleglycerol-phosphate dehydratase YP_417996.1 2707296 R 273036 CDS YP_417997.1 82752256 3794915 complement(2708871..2710121) 1 NC_007622.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2710121 hisD 3794915 hisD Staphylococcus aureus RF122 histidinol dehydrogenase YP_417997.1 2708871 R 273036 CDS YP_417998.1 82752257 3794917 complement(2710114..2710728) 1 NC_007622.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 2710728 hisG 3794917 hisG Staphylococcus aureus RF122 ATP phosphoribosyltransferase catalytic subunit YP_417998.1 2710114 R 273036 CDS YP_417999.1 82752258 3794695 complement(2710746..2711564) 1 NC_007622.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 2711564 hisZ 3794695 hisZ Staphylococcus aureus RF122 ATP phosphoribosyltransferase regulatory subunit YP_417999.1 2710746 R 273036 CDS YP_418000.1 82752259 3794696 complement(2711868..2712992) 1 NC_007622.1 hypothetical protein 2712992 3794696 SAB2557c Staphylococcus aureus RF122 hypothetical protein YP_418000.1 2711868 R 273036 CDS YP_418001.1 82752260 3794697 complement(2713110..2713607) 1 NC_007622.1 hypothetical protein 2713607 3794697 SAB2558c Staphylococcus aureus RF122 hypothetical protein YP_418001.1 2713110 R 273036 CDS YP_418002.1 82752261 3794698 complement(2713654..2714487) 1 NC_007622.1 cobalt ABC transporter 2714487 3794698 SAB2559c Staphylococcus aureus RF122 cobalt ABC transporter YP_418002.1 2713654 R 273036 CDS YP_418003.1 82752262 3794699 complement(2714484..2716196) 1 NC_007622.1 ATP-binding ABC transporter 2716196 3794699 SAB2560c Staphylococcus aureus RF122 ATP-binding ABC transporter YP_418003.1 2714484 R 273036 CDS YP_418004.1 82752263 3794700 complement(2716249..2716803) 1 NC_007622.1 hypothetical protein 2716803 3794700 SAB2561c Staphylococcus aureus RF122 hypothetical protein YP_418004.1 2716249 R 273036 CDS YP_418005.1 82752264 3794701 complement(2716832..2717680) 1 NC_007622.1 hypothetical protein 2717680 3794701 SAB2562c Staphylococcus aureus RF122 hypothetical protein YP_418005.1 2716832 R 273036 CDS YP_418006.1 82752265 3794702 2718062..2718577 1 NC_007622.1 hypothetical protein 2718577 3794702 SAB2563 Staphylococcus aureus RF122 hypothetical protein YP_418006.1 2718062 D 273036 CDS YP_418007.1 82752266 3793352 complement(2719052..2720026) 1 NC_007622.1 antibiotic-induced protein 2720026 drp35 3793352 drp35 Staphylococcus aureus RF122 antibiotic-induced protein YP_418007.1 2719052 R 273036 CDS YP_418008.1 82752267 3794703 2720267..2721223 1 NC_007622.1 hypothetical protein 2721223 3794703 SAB2565 Staphylococcus aureus RF122 hypothetical protein YP_418008.1 2720267 D 273036 CDS YP_418009.1 82752268 3794123 2721375..2722013 1 NC_007622.1 catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase 2722013 pcp 3794123 pcp Staphylococcus aureus RF122 pyrrolidone-carboxylate peptidase YP_418009.1 2721375 D 273036 CDS YP_418010.1 82752269 3794704 complement(2722132..2722899) 1 NC_007622.1 hypothetical protein 2722899 3794704 SAB2567c Staphylococcus aureus RF122 hypothetical protein YP_418010.1 2722132 R 273036 CDS YP_418011.1 82752270 3794705 complement(2722889..2723233) 1 NC_007622.1 hypothetical protein 2723233 3794705 SAB2568c Staphylococcus aureus RF122 hypothetical protein YP_418011.1 2722889 R 273036 CDS YP_418012.1 82752271 3794706 2723394..2723858 1 NC_007622.1 hypothetical protein 2723858 3794706 SAB2569 Staphylococcus aureus RF122 hypothetical protein YP_418012.1 2723394 D 273036 CDS YP_418013.1 82752272 3794707 2723861..2724004 1 NC_007622.1 hypothetical protein 2724004 3794707 SAB2570 Staphylococcus aureus RF122 hypothetical protein YP_418013.1 2723861 D 273036 CDS YP_418014.1 82752273 3794708 2724097..2725515 1 NC_007622.1 2-oxoglutarate-malate translocator 2725515 3794708 SAB2571 Staphylococcus aureus RF122 2-oxoglutarate-malate translocator YP_418014.1 2724097 D 273036 CDS YP_418015.1 82752274 3794709 complement(2725928..2726836) 1 NC_007622.1 hypothetical protein 2726836 3794709 SAB2572c Staphylococcus aureus RF122 hypothetical protein YP_418015.1 2725928 R 273036 CDS YP_418016.1 82752275 3794710 2727058..2727633 1 NC_007622.1 hypothetical protein 2727633 3794710 SAB2573 Staphylococcus aureus RF122 hypothetical protein YP_418016.1 2727058 D 273036 CDS YP_418017.1 82752276 3794711 2727799..2728815 1 NC_007622.1 high-affinity nickel-transport protein 2728815 3794711 SAB2574 Staphylococcus aureus RF122 high-affinity nickel-transport protein YP_418017.1 2727799 D 273036 CDS YP_418018.1 82752277 3795159 2729052..2729870 1 NC_007622.1 hypothetical protein 2729870 3795159 SAB2575 Staphylococcus aureus RF122 hypothetical protein YP_418018.1 2729052 D 273036 CDS YP_418019.1 82752278 3795160 complement(2729912..2730109) 1 NC_007622.1 hypothetical protein 2730109 3795160 SAB2576c Staphylococcus aureus RF122 hypothetical protein YP_418019.1 2729912 R 273036 CDS YP_418020.1 82752279 3795161 complement(2730244..2730756) 1 NC_007622.1 hypothetical protein 2730756 3795161 SAB2577c Staphylococcus aureus RF122 hypothetical protein YP_418020.1 2730244 R 273036 CDS YP_418021.1 82752280 3794173 2731046..2731804 1 NC_007622.1 ABC transporter 2731804 vraD 3794173 vraD Staphylococcus aureus RF122 ABC transporter YP_418021.1 2731046 D 273036 CDS YP_418022.1 82752281 3794174 2731794..2733674 1 NC_007622.1 ABC transporter permease 2733674 vraE 3794174 vraE Staphylococcus aureus RF122 ABC transporter permease YP_418022.1 2731794 D 273036 CDS YP_418023.1 82752282 3795162 2733767..2733958 1 NC_007622.1 hypothetical protein 2733958 3795162 SAB2580 Staphylococcus aureus RF122 hypothetical protein YP_418023.1 2733767 D 273036 CDS YP_418024.1 82752283 3795276 2734351..2734551 1 NC_007622.1 cold shock protein 2734551 cspB 3795276 cspB Staphylococcus aureus RF122 cold shock protein YP_418024.1 2734351 D 273036 CDS YP_418025.1 82752284 3795163 complement(2734678..2735247) 1 NC_007622.1 hypothetical protein 2735247 3795163 SAB2582c Staphylococcus aureus RF122 hypothetical protein YP_418025.1 2734678 R 273036 CDS YP_418026.1 82752285 3795164 complement(2735507..2735902) 1 NC_007622.1 hypothetical protein 2735902 3795164 SAB2583c Staphylococcus aureus RF122 hypothetical protein YP_418026.1 2735507 R 273036 CDS YP_418027.1 82752286 3795165 complement(2735970..2736323) 1 NC_007622.1 hypothetical protein 2736323 3795165 SAB2584c Staphylococcus aureus RF122 hypothetical protein YP_418027.1 2735970 R 273036 CDS YP_418028.1 82752287 3795166 complement(2736640..2737479) 1 NC_007622.1 hypothetical protein 2737479 3795166 SAB2585c Staphylococcus aureus RF122 hypothetical protein YP_418028.1 2736640 R 273036 CDS YP_418029.1 82752288 3793641 complement(2737522..2738241) 1 NC_007622.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 2738241 gidB 3793641 gidB Staphylococcus aureus RF122 16S rRNA methyltransferase GidB YP_418029.1 2737522 R 273036 CDS YP_418030.1 82752289 3793640 complement(2738241..2740118) 1 NC_007622.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2740118 gidA 3793640 gidA Staphylococcus aureus RF122 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_418030.1 2738241 R 273036 CDS YP_418031.1 82752290 3795167 complement(2740185..2741564) 1 NC_007622.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 2741564 trmE 3795167 trmE Staphylococcus aureus RF122 tRNA modification GTPase TrmE YP_418031.1 2740185 R 273036 CDS YP_418032.1 82752291 3793102 complement(2741706..2742059) 1 NC_007622.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 2742059 rnpA 3793102 rnpA Staphylococcus aureus RF122 ribonuclease P YP_418032.1 2741706 R 273036 CDS YP_418033.1 82752292 3792925 complement(2742180..2742317) 1 NC_007622.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 2742317 rpmH 3792925 rpmH Staphylococcus aureus RF122 50S ribosomal protein L34 YP_418033.1 2742180 R 273036 CDS