-- dump date 20140620_074713 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 273036000001 SEQ_END SEQ_END NC_007622.1 2742531 2742531 DR NC_007622.1; contig end 2742531..2742531 Staphylococcus aureus RF122 YP_415519.1 CDS dnaA NC_007622.1 517 1878 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 517..1878 Staphylococcus aureus RF122 3794488 YP_415520.1 CDS dnaN NC_007622.1 2156 3289 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2156..3289 Staphylococcus aureus RF122 3793349 YP_415521.1 CDS SAB0003 NC_007622.1 3670 3915 D hypothetical protein 3670..3915 Staphylococcus aureus RF122 3793895 YP_415522.1 CDS recF NC_007622.1 3912 5024 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3912..5024 Staphylococcus aureus RF122 3794273 YP_415523.1 CDS gyrB NC_007622.1 5034 6968 D DNA gyrase subunit B 5034..6968 Staphylococcus aureus RF122 3794240 YP_415524.1 CDS gyrA NC_007622.1 7005 9665 D DNA gyrase subunit A 7005..9665 Staphylococcus aureus RF122 3794239 YP_415525.1 CDS SAB0007c NC_007622.1 9753 10583 R hypothetical protein complement(9753..10583) Staphylococcus aureus RF122 3793896 YP_415526.1 CDS hutH NC_007622.1 10890 12404 D catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 10890..12404 Staphylococcus aureus RF122 3794096 YP_415527.1 CDS serS NC_007622.1 12781 14067 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 12781..14067 Staphylococcus aureus RF122 3794621 YP_415528.1 CDS SAB0010 NC_007622.1 14706 15401 D hypothetical protein 14706..15401 Staphylococcus aureus RF122 3793897 YP_415529.1 CDS SAB0011 NC_007622.1 15398 15727 D hypothetical protein 15398..15727 Staphylococcus aureus RF122 3793898 YP_415530.1 CDS SAB0012 NC_007622.1 16090 17058 D homoserine-o-acetyltransferase 16090..17058 Staphylococcus aureus RF122 3793899 YP_415531.1 CDS SAB0013 NC_007622.1 17303 18289 D hypothetical protein 17303..18289 Staphylococcus aureus RF122 3793900 YP_415532.1 CDS SAB0014 NC_007622.1 18304 20271 D hypothetical protein 18304..20271 Staphylococcus aureus RF122 3793901 YP_415533.1 CDS rplI NC_007622.1 20268 20714 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 20268..20714 Staphylococcus aureus RF122 3795082 YP_415534.1 CDS dnaC NC_007622.1 20746 22146 D replicative DNA helicase 20746..22146 Staphylococcus aureus RF122 3794491 YP_415535.1 CDS purA NC_007622.1 22426 23709 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 22426..23709 Staphylococcus aureus RF122 3794043 YP_415536.1 CDS yycF NC_007622.1 25153 25860 D two-component response regulator 25153..25860 Staphylococcus aureus RF122 3794179 YP_415537.1 CDS yycG NC_007622.1 25873 27699 D two-component sensor histidine kinase 25873..27699 Staphylococcus aureus RF122 3794180 YP_415538.1 CDS yycH NC_007622.1 27683 29026 D hypothetical protein 27683..29026 Staphylococcus aureus RF122 3794181 YP_415539.1 CDS yycI NC_007622.1 29027 29815 D hypothetical protein 29027..29815 Staphylococcus aureus RF122 3794182 YP_415540.1 CDS yycJ NC_007622.1 30204 31004 D hypothetical protein 30204..31004 Staphylococcus aureus RF122 3794183 YP_415541.1 CDS SAB0023 NC_007622.1 31231 33549 D 5' nucleotidase 31231..33549 Staphylococcus aureus RF122 3793902 YP_415542.1 CDS SAB0024 NC_007622.1 33918 34397 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 33918..34397 Staphylococcus aureus RF122 3793903 YP_415543.1 CDS SAB0025 NC_007622.1 34735 35634 D hypothetical protein 34735..35634 Staphylococcus aureus RF122 3793904 YP_415544.1 CDS SAB0026 NC_007622.1 36930 37709 D enterotoxin protein 36930..37709 Staphylococcus aureus RF122 3793905 YP_415545.1 CDS SAB0027c NC_007622.1 37894 38373 R hypothetical protein complement(37894..38373) Staphylococcus aureus RF122 3793906 YP_415546.1 CDS SAB0028c NC_007622.1 38856 39611 R hypothetical protein complement(38856..39611) Staphylococcus aureus RF122 3793757 YP_415547.1 CDS SAB0029c NC_007622.1 39611 39877 R hypothetical protein complement(39611..39877) Staphylococcus aureus RF122 3793758 YP_415548.1 CDS SAB0030 NC_007622.1 40008 41075 D hypothetical protein 40008..41075 Staphylococcus aureus RF122 3793759 YP_415549.1 CDS SAB0031 NC_007622.1 41106 42440 D hydroxyacylglutathione hydrolase 41106..42440 Staphylococcus aureus RF122 3793760 YP_415550.1 CDS SAB0032 NC_007622.1 42459 43652 D sulfide-quinone reductase 42459..43652 Staphylococcus aureus RF122 3793761 YP_415551.1 CDS SAB0033c NC_007622.1 44316 45302 R hypothetical protein complement(44316..45302) Staphylococcus aureus RF122 3793762 YP_415552.1 CDS SAB0034 NC_007622.1 45611 45814 D hypothetical protein 45611..45814 Staphylococcus aureus RF122 3793763 YP_415553.1 CDS SAB0035 NC_007622.1 45864 46160 D hypothetical protein 45864..46160 Staphylococcus aureus RF122 3793764 YP_415554.1 CDS SAB0036 NC_007622.1 46608 47339 D hypothetical protein 46608..47339 Staphylococcus aureus RF122 3793765 YP_415555.1 CDS SAB0037 NC_007622.1 47495 48043 D hypothetical protein 47495..48043 Staphylococcus aureus RF122 3793766 YP_415556.1 CDS plc NC_007622.1 48181 49167 D 1-phosphatidylinositol phosphodiesterase 48181..49167 Staphylococcus aureus RF122 3794475 YP_415557.1 CDS SAB0040 NC_007622.1 50209 50979 D hypothetical protein 50209..50979 Staphylococcus aureus RF122 3793768 YP_415558.1 CDS SAB0041 NC_007622.1 51063 53300 D transcriptional regulator 51063..53300 Staphylococcus aureus RF122 3793769 YP_415559.1 CDS SAB0042 NC_007622.1 53451 54629 D aminoacylase 53451..54629 Staphylococcus aureus RF122 3793770 YP_415560.1 CDS SAB0043 NC_007622.1 54631 56019 D antibiotic resistance-related transmembrane efflux protein 54631..56019 Staphylococcus aureus RF122 3793771 YP_415561.1 CDS SAB0044c NC_007622.1 56508 58175 R membrane transporter complement(56508..58175) Staphylococcus aureus RF122 3793772 YP_415562.1 CDS SAB0045c NC_007622.1 58494 60269 R in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen complement(58494..60269) Staphylococcus aureus RF122 3793773 YP_415563.1 CDS SAB0046c NC_007622.1 60443 61315 R membrane transporter complement(60443..61315) Staphylococcus aureus RF122 3793774 YP_415564.1 CDS SAB0047 NC_007622.1 61429 62826 D transcriptional regulator 61429..62826 Staphylococcus aureus RF122 3793775 YP_415565.1 CDS SAB0048 NC_007622.1 63016 63489 D hypothetical protein 63016..63489 Staphylococcus aureus RF122 3794555 YP_415566.1 CDS lldP NC_007622.1 63751 65343 D L-lactate permease 63751..65343 Staphylococcus aureus RF122 3794753 YP_415567.1 CDS sarS NC_007622.1 67420 68172 R SarS family transcriptional regulator complement(67420..68172) Staphylococcus aureus RF122 3793175 YP_415568.1 CDS sirC NC_007622.1 68541 69536 R siderophore transport protein complement(68541..69536) Staphylococcus aureus RF122 3792997 YP_415569.1 CDS sirB NC_007622.1 69533 70528 R siderophore transport protein complement(69533..70528) Staphylococcus aureus RF122 3794633 YP_415570.1 CDS sirA NC_007622.1 70544 71536 R iron-regulated lipoprotein complement(70544..71536) Staphylococcus aureus RF122 3794632 YP_415571.1 CDS SAB0055 NC_007622.1 71767 72747 D cysteine synthase A protein 71767..72747 Staphylococcus aureus RF122 3794556 YP_415572.1 CDS SAB0056 NC_007622.1 72744 73754 D ornithine cyclodeaminase protein 72744..73754 Staphylococcus aureus RF122 3794557 YP_415573.1 CDS SAB0057 NC_007622.1 73775 75529 D siderophore biosynthesis protein 73775..75529 Staphylococcus aureus RF122 3794558 YP_415574.1 CDS SAB0058 NC_007622.1 75522 76778 D membrane transporter 75522..76778 Staphylococcus aureus RF122 3794559 YP_415575.1 CDS SAB0059 NC_007622.1 76768 78504 D siderophore biosynthesis protein 76768..78504 Staphylococcus aureus RF122 3794560 YP_415576.1 CDS SAB0060 NC_007622.1 78485 80263 D siderophore biosynthesis protein 78485..80263 Staphylococcus aureus RF122 3794561 YP_415577.1 CDS SAB0061 NC_007622.1 80238 81014 D aldolase 80238..81014 Staphylococcus aureus RF122 3794562 YP_415578.1 CDS SAB0062 NC_007622.1 81014 82216 D diaminopimelate decarboxylase protein 81014..82216 Staphylococcus aureus RF122 3794563 YP_415579.1 CDS SAB0063 NC_007622.1 82220 82984 D hypothetical protein 82220..82984 Staphylococcus aureus RF122 3794564 YP_415580.1 CDS SAB0065 NC_007622.1 83609 84403 D hypothetical protein 83609..84403 Staphylococcus aureus RF122 3794566 YP_415581.1 CDS SAB0066 NC_007622.1 84615 85391 D acetoin reductase 84615..85391 Staphylococcus aureus RF122 3794567 YP_415582.1 CDS SAB0067 NC_007622.1 85737 86708 D UDP-glucose 4-epimerase 85737..86708 Staphylococcus aureus RF122 3794568 YP_415583.1 CDS cap5M NC_007622.1 86671 87363 D capsular polysaccharide biosynthesis glycosyltransferase 86671..87363 Staphylococcus aureus RF122 3792662 YP_415584.1 CDS cap8H NC_007622.1 87573 88739 D capsular glycosyltransferase 87573..88739 Staphylococcus aureus RF122 3792663 YP_415585.1 CDS cps2H NC_007622.1 88720 89958 D hypothetical protein 88720..89958 Staphylococcus aureus RF122 3794845 YP_415586.1 CDS SAB0071 NC_007622.1 89948 91378 D lipopolysaccharide flipase protein 89948..91378 Staphylococcus aureus RF122 3794569 YP_415587.1 CDS sodM NC_007622.1 91647 92246 D [Mn/Fe]; manganese/iron superoxide dismutase 91647..92246 Staphylococcus aureus RF122 3793002 YP_415588.1 CDS SAB0073 NC_007622.1 92615 93340 D surface protein 92615..93340 Staphylococcus aureus RF122 3794570 YP_415589.1 CDS SAB0074c NC_007622.1 93531 94271 R transcriptional regulator complement(93531..94271) Staphylococcus aureus RF122 3794571 YP_415590.1 CDS deoD1 NC_007622.1 94522 95229 D catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 94522..95229 Staphylococcus aureus RF122 3794479 YP_415591.1 CDS SAB0076 NC_007622.1 95230 96588 D membrane transporter 95230..96588 Staphylococcus aureus RF122 3794572 YP_415592.1 CDS deoC1 NC_007622.1 96669 97331 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 96669..97331 Staphylococcus aureus RF122 3794477 YP_415593.1 CDS drm NC_007622.1 97359 98537 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 97359..98537 Staphylococcus aureus RF122 3793351 YP_415594.1 CDS SAB0079c NC_007622.1 98761 98985 R hypothetical protein complement(98761..98985) Staphylococcus aureus RF122 3794573 YP_415595.1 CDS SAB0080c NC_007622.1 99008 99547 R hypothetical protein complement(99008..99547) Staphylococcus aureus RF122 3794574 YP_415596.1 CDS SAB0081c NC_007622.1 99992 100807 R phosphonate ABC transporter permease complement(99992..100807) Staphylococcus aureus RF122 3795237 YP_415597.1 CDS SAB0083c NC_007622.1 101604 102377 R transport system protein complement(101604..102377) Staphylococcus aureus RF122 3795239 YP_415598.1 CDS SAB0084c NC_007622.1 102591 103547 R transport protein complement(102591..103547) Staphylococcus aureus RF122 3795240 YP_415599.1 CDS SAB0085 NC_007622.1 103777 105321 D hypothetical protein 103777..105321 Staphylococcus aureus RF122 3795241 YP_415600.1 CDS cpdB NC_007622.1 105372 106865 D 2',3'-cyclic-nucleotide 2'-phosphodiesterase 105372..106865 Staphylococcus aureus RF122 3794844 YP_415601.1 CDS SAB0088 NC_007622.1 107836 109011 D transcriptional regulator 107836..109011 Staphylococcus aureus RF122 3795243 YP_415602.1 CDS SAB0089 NC_007622.1 109399 112008 D bifunctional acetaldehyde-CoA/alcohol dehydrogenase 109399..112008 Staphylococcus aureus RF122 3795244 YP_415603.1 CDS capA NC_007622.1 112353 113021 D capsular polysaccharide synthesis enzyme CapA 112353..113021 Staphylococcus aureus RF122 3794399 YP_415604.1 CDS capB NC_007622.1 113037 113723 D capsular polysaccharide synthesis enzyme CapB 113037..113723 Staphylococcus aureus RF122 3794400 YP_415605.1 CDS capC NC_007622.1 113726 114490 D capsular polysaccharide synthesis enzyme CapC 113726..114490 Staphylococcus aureus RF122 3794401 YP_415606.1 CDS capD NC_007622.1 114510 116333 D capsular polysaccharide synthesis enzyme CapD 114510..116333 Staphylococcus aureus RF122 3794402 YP_415607.1 CDS capE NC_007622.1 116323 117351 D capsular polysaccharide synthesis enzyme CapE 116323..117351 Staphylococcus aureus RF122 3794403 YP_415608.1 CDS capF NC_007622.1 117364 118473 D capsular polysaccharide synthesis enzyme CapF 117364..118473 Staphylococcus aureus RF122 3794404 YP_415609.1 CDS capG NC_007622.1 118477 119601 D capsular polysaccharide synthesis enzyme CapG 118477..119601 Staphylococcus aureus RF122 3794405 YP_415610.1 CDS cap8H NC_007622.1 119604 120683 D capsular polysaccharide synthesis enzyme CapH 119604..120683 Staphylococcus aureus RF122 3792664 YP_415611.1 CDS cap8I NC_007622.1 120676 122070 D capsular polysaccharide synthesis enzyme CapI 120676..122070 Staphylococcus aureus RF122 3792665 YP_415612.1 CDS cap8J NC_007622.1 122067 122624 D capsular polysaccharide synthesis enzyme CapJ 122067..122624 Staphylococcus aureus RF122 3792666 YP_415613.1 CDS cap8K NC_007622.1 122633 123871 D capsular polysaccharide synthesis enzyme CapK 122633..123871 Staphylococcus aureus RF122 3792667 YP_415614.1 CDS capL NC_007622.1 123905 125110 D capsular polysaccharide synthesis enzyme CapL 123905..125110 Staphylococcus aureus RF122 3794406 YP_415615.1 CDS capM NC_007622.1 125121 125678 D capsular polysaccharide synthesis enzyme CapM 125121..125678 Staphylococcus aureus RF122 3794407 YP_415616.1 CDS capN NC_007622.1 125678 126565 D capsular polysaccharide synthesis enzyme CapN 125678..126565 Staphylococcus aureus RF122 3794408 YP_415617.1 CDS capO NC_007622.1 126619 127881 D capsular polysaccharide synthesis enzyme CapO 126619..127881 Staphylococcus aureus RF122 3794409 YP_415618.1 CDS capP NC_007622.1 127928 129103 D capsular polysaccharide synthesis enzyme CapP 127928..129103 Staphylococcus aureus RF122 3794410 YP_415619.1 CDS SAB0107c NC_007622.1 129501 129884 R hypothetical protein complement(129501..129884) Staphylococcus aureus RF122 3795246 YP_415620.1 CDS aldA NC_007622.1 130311 131798 D aldehyde dehdydrogenase 130311..131798 Staphylococcus aureus RF122 3794897 YP_415621.1 CDS SAB0109 NC_007622.1 132442 133401 D cation-efflux system membrane protein 132442..133401 Staphylococcus aureus RF122 3795247 YP_415622.1 CDS SAB0110c NC_007622.1 133462 133665 R hypothetical protein complement(133462..133665) Staphylococcus aureus RF122 3795248 YP_415623.1 CDS SAB0111 NC_007622.1 133844 134356 D hypothetical protein 133844..134356 Staphylococcus aureus RF122 3795249 YP_415624.1 CDS SAB0112 NC_007622.1 134697 135437 D nitrate/nitrite system ATP-binding ABC transporter 134697..135437 Staphylococcus aureus RF122 3795250 YP_415625.1 CDS SAB0113 NC_007622.1 135451 136425 D lipoprotein 135451..136425 Staphylococcus aureus RF122 3795251 YP_415626.1 CDS SAB0114 NC_007622.1 136422 137183 D ABC transporter permease 136422..137183 Staphylococcus aureus RF122 3795252 YP_415627.1 CDS SAB0115 NC_007622.1 137196 138227 D hypothetical protein 137196..138227 Staphylococcus aureus RF122 3795253 YP_415628.1 CDS SAB0116 NC_007622.1 138444 138698 D hypothetical protein 138444..138698 Staphylococcus aureus RF122 3795254 YP_415629.1 CDS SAB0117 NC_007622.1 138873 140000 D Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase 138873..140000 Staphylococcus aureus RF122 3795255 YP_415630.1 CDS SAB0118 NC_007622.1 140385 141635 D integral membrane transport protein 140385..141635 Staphylococcus aureus RF122 3793288 YP_415631.1 CDS SAB0119 NC_007622.1 142064 149254 D surfactin/siderophore synthetase 142064..149254 Staphylococcus aureus RF122 3793289 YP_415632.1 CDS SAB0120 NC_007622.1 149267 149911 D 4'-phosphopantetheinyl transferase superfamily protein 149267..149911 Staphylococcus aureus RF122 3793290 YP_415633.1 CDS SAB0121c NC_007622.1 150240 150734 R hypothetical protein complement(150240..150734) Staphylococcus aureus RF122 3793291 YP_415634.1 CDS SAB0122c NC_007622.1 151005 151775 R acetylglutamate kinase complement(151005..151775) Staphylococcus aureus RF122 3793292 YP_415635.1 CDS argJ NC_007622.1 151791 153032 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein complement(151791..153032) Staphylococcus aureus RF122 3793293 YP_415636.1 CDS SAB0125c NC_007622.1 154114 155298 R ornithine aminotransferase complement(154114..155298) Staphylococcus aureus RF122 3793295 YP_415637.1 CDS SAB0126c NC_007622.1 155547 156902 R branched chain amino acid ABC transporter carrier protein complement(155547..156902) Staphylococcus aureus RF122 3793296 YP_415638.1 CDS SAB0127c NC_007622.1 157179 157736 R hydrolase complement(157179..157736) Staphylococcus aureus RF122 3793297 YP_415639.1 CDS SAB0128c NC_007622.1 157802 159442 R pyruvate decarboxylase complement(157802..159442) Staphylococcus aureus RF122 3793298 YP_415640.1 CDS glcA NC_007622.1 159714 161759 R phosphotransferase system enzyme II glucose-specific factor IIA complement(159714..161759) Staphylococcus aureus RF122 3793642 YP_415641.1 CDS SAB0130 NC_007622.1 162345 163379 D hypothetical protein 162345..163379 Staphylococcus aureus RF122 3793299 YP_415642.1 CDS murQ NC_007622.1 163397 164296 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 163397..164296 Staphylococcus aureus RF122 3793300 YP_415643.1 CDS SAB0132 NC_007622.1 164308 165762 D PTS system sucrose-specific IIBC component 164308..165762 Staphylococcus aureus RF122 3793301 YP_415644.1 CDS SAB0133 NC_007622.1 165765 166640 D RpiR family transcriptional regulator 165765..166640 Staphylococcus aureus RF122 3793302 YP_415645.1 CDS SAB0134c NC_007622.1 166836 167117 R hypothetical protein complement(166836..167117) Staphylococcus aureus RF122 3793303 YP_415646.1 CDS SAB0135 NC_007622.1 167330 170119 D type I restriction enzyme restriction chain 167330..170119 Staphylococcus aureus RF122 3793304 YP_415647.1 CDS SAB0136c NC_007622.1 170266 170865 R hypothetical protein complement(170266..170865) Staphylococcus aureus RF122 3793305 YP_415648.1 CDS SAB0137 NC_007622.1 170989 172101 D hypothetical protein 170989..172101 Staphylococcus aureus RF122 3793306 YP_415649.1 CDS SAB0138 NC_007622.1 172098 172778 D ABC transporter ATP-binding protein 172098..172778 Staphylococcus aureus RF122 3793307 YP_415650.1 CDS SAB0139 NC_007622.1 172967 173953 D ABC transporter ATP-binding protein 172967..173953 Staphylococcus aureus RF122 3794575 YP_415651.1 CDS SAB0140 NC_007622.1 174161 174382 D hypothetical protein 174161..174382 Staphylococcus aureus RF122 3794576 YP_415652.1 CDS SAB0141 NC_007622.1 174453 176138 D hypothetical protein 174453..176138 Staphylococcus aureus RF122 3794577 YP_415653.1 CDS SAB0142 NC_007622.1 176196 176639 D hypothetical protein 176196..176639 Staphylococcus aureus RF122 3794578 YP_415654.1 CDS SAB0143 NC_007622.1 176651 177373 D ABC transporter ATP-binding protein 176651..177373 Staphylococcus aureus RF122 3794579 YP_415655.1 CDS SAB0145 NC_007622.1 179783 181261 D peptide ABC transporter permease 179783..181261 Staphylococcus aureus RF122 3794581 YP_415656.1 CDS SAB0146 NC_007622.1 181267 182430 D oligopeptide ABC transporter 181267..182430 Staphylococcus aureus RF122 3794582 YP_415657.1 CDS SAB0147 NC_007622.1 182447 184222 D RGD-containing lipoprotein 182447..184222 Staphylococcus aureus RF122 3794583 YP_415658.1 CDS SAB0148 NC_007622.1 184260 186266 D gamma-glutamyltransferase 184260..186266 Staphylococcus aureus RF122 3794584 YP_415659.2 CDS SAB0149c NC_007622.1 186804 187430 R FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase complement(186804..187430) Staphylococcus aureus RF122 3794585 YP_415660.1 CDS SAB0150 NC_007622.1 187639 188217 D hypothetical protein 187639..188217 Staphylococcus aureus RF122 3794586 YP_415661.1 CDS SAB0151 NC_007622.1 188600 189697 D multiple sugar-binding transport ATP-binding protein 188600..189697 Staphylococcus aureus RF122 3794587 YP_415662.1 CDS SAB0152 NC_007622.1 189710 190981 D maltose/maltodextrin transport system protein 189710..190981 Staphylococcus aureus RF122 3794588 YP_415663.1 CDS SAB0153 NC_007622.1 190984 192252 D maltose/maltodextrin transport permease protein 190984..192252 Staphylococcus aureus RF122 3794589 YP_415664.1 CDS SAB0154 NC_007622.1 192254 193093 D maltose/maltodextrin transport system protein 192254..193093 Staphylococcus aureus RF122 3794590 YP_415665.1 CDS SAB0155 NC_007622.1 193135 193392 D hypothetical protein 193135..193392 Staphylococcus aureus RF122 3794591 YP_415666.1 CDS SAB0156 NC_007622.1 193451 194530 D NADH-dependent dehydrogenase 193451..194530 Staphylococcus aureus RF122 3794592 YP_415667.1 CDS SAB0157 NC_007622.1 194555 195595 D NADH-dependent dehydrogenase 194555..195595 Staphylococcus aureus RF122 3794593 YP_415668.1 CDS SAB0158 NC_007622.1 195650 196618 D hypothetical protein 195650..196618 Staphylococcus aureus RF122 3794301 YP_415669.1 CDS SAB0159c NC_007622.1 196979 197473 R hypothetical protein complement(196979..197473) Staphylococcus aureus RF122 3794302 YP_415670.1 CDS uhpT NC_007622.1 197706 199085 D cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter 197706..199085 Staphylococcus aureus RF122 3795134 YP_415671.1 CDS SAB0161c NC_007622.1 199444 200202 R two-component response regulator complement(199444..200202) Staphylococcus aureus RF122 3794303 YP_415672.1 CDS SAB0162c NC_007622.1 200195 201751 R two-component sensor histidine kinase complement(200195..201751) Staphylococcus aureus RF122 3794304 YP_415673.1 CDS SAB0163c NC_007622.1 201748 202716 R similar to S. epidermidis BitC protein; periplasmic iron binding protein complement(201748..202716) Staphylococcus aureus RF122 3794305 YP_415674.1 CDS SAB0164 NC_007622.1 203304 205553 D formate acetyltransferase 203304..205553 Staphylococcus aureus RF122 3794306 YP_415675.1 CDS SAB0165 NC_007622.1 205576 206331 D formate acetyltransferase activating enzyme 205576..206331 Staphylococcus aureus RF122 3794307 YP_415676.1 CDS SAB0166 NC_007622.1 206321 206629 D hypothetical protein 206321..206629 Staphylococcus aureus RF122 3794308 YP_415677.1 CDS SAB0167 NC_007622.1 206667 208430 D hypothetical protein 206667..208430 Staphylococcus aureus RF122 3794309 YP_415678.1 CDS SAB0168c NC_007622.1 208595 208939 R hypothetical protein complement(208595..208939) Staphylococcus aureus RF122 3794310 YP_415679.1 CDS SAB0169 NC_007622.1 209129 211012 D staphylocoagulase precursor 209129..211012 Staphylococcus aureus RF122 3794311 YP_415680.1 CDS SAB0170c NC_007622.1 211599 212792 R 3-ketoacyl-CoA transferase complement(211599..212792) Staphylococcus aureus RF122 3794312 YP_415681.1 CDS SAB0171c NC_007622.1 212813 215074 R 3-hydroxyacyl-CoA dehydrogenase complement(212813..215074) Staphylococcus aureus RF122 3794313 YP_415682.1 CDS SAB0173c NC_007622.1 216583 218088 R acyl-CoA synthetase complement(216583..218088) Staphylococcus aureus RF122 3794314 YP_415683.1 CDS SAB0174c NC_007622.1 218114 219694 R acetyl-CoA/acetoacetyl-CoA transferase complement(218114..219694) Staphylococcus aureus RF122 3794315 YP_415684.1 CDS SAB0175 NC_007622.1 220045 221274 D hypothetical protein 220045..221274 Staphylococcus aureus RF122 3794316 YP_415685.1 CDS SAB0176c NC_007622.1 221588 223063 R peptide ABC transporter complement(221588..223063) Staphylococcus aureus RF122 3794317 YP_415686.1 CDS SAB0177c NC_007622.1 223261 223617 R hypothetical protein complement(223261..223617) Staphylococcus aureus RF122 3794318 YP_415687.1 CDS SAB0178c NC_007622.1 223774 223947 R hypothetical protein complement(223774..223947) Staphylococcus aureus RF122 3794319 YP_415688.1 CDS SAB0179c NC_007622.1 223973 225118 R flavohemoprotein complement(223973..225118) Staphylococcus aureus RF122 3794320 YP_415689.1 CDS SAB0180 NC_007622.1 225690 226643 D L-lactate dehydrogenase 225690..226643 Staphylococcus aureus RF122 3793564 YP_415690.1 CDS SAB0181c NC_007622.1 226964 228412 R phosphotransferase system enzyme II complement(226964..228412) Staphylococcus aureus RF122 3793565 YP_415691.1 CDS SAB0182 NC_007622.1 228854 229789 D inosine-uridine preferring nucleoside hydrolase family protein 228854..229789 Staphylococcus aureus RF122 3793566 YP_415692.1 CDS SAB0184 NC_007622.1 232214 232681 D phosphotransferase system enzyme 232214..232681 Staphylococcus aureus RF122 3793568 YP_415693.1 CDS SAB0185 NC_007622.1 232704 232922 D phosphotransferase system galactitol-specific enzyme II, B component 232704..232922 Staphylococcus aureus RF122 3793569 YP_415694.1 CDS SAB0186 NC_007622.1 233205 234464 D phosphotransferase system galactitol-specific enzyme II, C component 233205..234464 Staphylococcus aureus RF122 3793570 YP_415695.1 CDS SAB0187 NC_007622.1 234482 235537 D zinc-binding sorbitol dehydrogenase 234482..235537 Staphylococcus aureus RF122 3793571 YP_415696.1 CDS SAB0188 NC_007622.1 235539 235685 D hypothetical protein 235539..235685 Staphylococcus aureus RF122 3793572 YP_415697.1 CDS SAB0189 NC_007622.1 235709 236752 D zinc-binding sorbitol dehydrogenase 235709..236752 Staphylococcus aureus RF122 3793573 YP_415698.1 CDS SAB0190 NC_007622.1 237280 237996 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 237280..237996 Staphylococcus aureus RF122 3793574 YP_415699.1 CDS SAB0192 NC_007622.1 239037 240731 D teichoic acid biosynthesis protein B 239037..240731 Staphylococcus aureus RF122 3793576 YP_415700.1 CDS SAB0193 NC_007622.1 241159 242328 D teichoic acid biosynthesis protein F 241159..242328 Staphylococcus aureus RF122 3793577 YP_415701.1 CDS ispD NC_007622.1 242604 243320 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 242604..243320 Staphylococcus aureus RF122 3793578 YP_415702.1 CDS SAB0195 NC_007622.1 243313 244338 D xylitol dehydrogenase 243313..244338 Staphylococcus aureus RF122 3793579 YP_415703.1 CDS SAB0196 NC_007622.1 244360 246048 D teichoic acid biosynthesis protein B 244360..246048 Staphylococcus aureus RF122 3793580 YP_415704.1 CDS SAB0197 NC_007622.1 246081 247802 D glycosyl transferase 246081..247802 Staphylococcus aureus RF122 3793581 YP_415705.1 CDS scdA NC_007622.1 247946 248620 D involved in peptidoglycan cross-linking; cell wall biosynthesis protein ScdA 247946..248620 Staphylococcus aureus RF122 3793177 YP_415706.1 CDS lytS NC_007622.1 248866 250620 D two-component sensor histidine kinase 248866..250620 Staphylococcus aureus RF122 3794767 YP_415707.1 CDS lytR NC_007622.1 250623 251363 D two-component response regulator 250623..251363 Staphylococcus aureus RF122 3794766 YP_415708.1 CDS lrgA NC_007622.1 251476 251919 D negatively regulates murein hydrolase activity; murein hydrolase regulator LrgA 251476..251919 Staphylococcus aureus RF122 3794755 YP_415709.1 CDS lrgB NC_007622.1 251912 252613 D in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases; antiholin-like protein LrgB 251912..252613 Staphylococcus aureus RF122 3794756 YP_415710.1 CDS SAB0203c NC_007622.1 252721 253425 R GntR family transcriptional regulator complement(252721..253425) Staphylococcus aureus RF122 3793582 YP_415711.1 CDS SAB0204 NC_007622.1 253574 254365 D PTS system transport protein 253574..254365 Staphylococcus aureus RF122 3793328 YP_415712.1 CDS bglA NC_007622.1 254405 255817 D 6-phospho-beta-glucosidase 254405..255817 Staphylococcus aureus RF122 3792658 YP_415713.1 CDS SAB0206 NC_007622.1 255881 256174 D hypothetical protein 255881..256174 Staphylococcus aureus RF122 3793329 YP_415714.1 CDS SAB0207c NC_007622.1 256336 257097 R hypothetical protein complement(256336..257097) Staphylococcus aureus RF122 3793330 YP_415715.1 CDS SAB0208c NC_007622.1 257347 258261 R ribokinase complement(257347..258261) Staphylococcus aureus RF122 3793331 YP_415716.1 CDS SAB0209c NC_007622.1 258289 258693 R cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase complement(258289..258693) Staphylococcus aureus RF122 3793332 YP_415717.1 CDS SAB0210c NC_007622.1 258708 259589 R ribose transporter complement(258708..259589) Staphylococcus aureus RF122 3793333 YP_415718.1 CDS SAB0211c NC_007622.1 259821 260819 R ribose operon transcriptional regulator complement(259821..260819) Staphylococcus aureus RF122 3793334 YP_415719.1 CDS SAB0212 NC_007622.1 261200 261589 D hypothetical protein 261200..261589 Staphylococcus aureus RF122 3793335 YP_415720.1 CDS SAB0213c NC_007622.1 261718 263094 R membrane transporter complement(261718..263094) Staphylococcus aureus RF122 3793336 YP_415721.1 CDS SAB0214 NC_007622.1 263328 264320 D penicillin-related choloylglycine hydrolase 263328..264320 Staphylococcus aureus RF122 3793337 YP_415722.1 CDS lytM NC_007622.1 264640 265590 D peptidoglycan hydrolase 264640..265590 Staphylococcus aureus RF122 3794765 YP_415723.1 CDS SAB0216c NC_007622.1 265642 266301 R ABC transporter ATP-binding protein complement(265642..266301) Staphylococcus aureus RF122 3793338 YP_415724.1 CDS SAB0217c NC_007622.1 266315 267235 R hypothetical protein complement(266315..267235) Staphylococcus aureus RF122 3793339 YP_415725.1 CDS SAB0218c NC_007622.1 267232 268398 R hypothetical protein complement(267232..268398) Staphylococcus aureus RF122 3793340 YP_415726.1 CDS SAB0219c NC_007622.1 268466 269989 R hypothetical protein complement(268466..269989) Staphylococcus aureus RF122 3793341 YP_415727.1 CDS SAB0220 NC_007622.1 270492 270911 D hypothetical protein 270492..270911 Staphylococcus aureus RF122 3793342 YP_415728.1 CDS SAB0221 NC_007622.1 270945 271547 D hypothetical protein 270945..271547 Staphylococcus aureus RF122 3793343 YP_415729.1 CDS SAB0223 NC_007622.1 272817 273110 D hypothetical protein 272817..273110 Staphylococcus aureus RF122 3793345 YP_415730.1 CDS SAB0224 NC_007622.1 273193 276222 D hypothetical protein 273193..276222 Staphylococcus aureus RF122 3793346 YP_415731.1 CDS SAB0226 NC_007622.1 276651 276893 D hypothetical protein 276651..276893 Staphylococcus aureus RF122 3792746 YP_415732.1 CDS SAB0227 NC_007622.1 276906 278240 D hypothetical protein 276906..278240 Staphylococcus aureus RF122 3792747 YP_415733.1 CDS SAB0228 NC_007622.1 278262 282701 D DNA segregation ATPase and related protein 278262..282701 Staphylococcus aureus RF122 3792748 YP_415734.1 CDS SAB0229 NC_007622.1 282731 283123 D hypothetical protein 282731..283123 Staphylococcus aureus RF122 3792749 YP_415735.1 CDS SAB0230 NC_007622.1 283139 283453 D hypothetical protein 283139..283453 Staphylococcus aureus RF122 3792750 YP_415736.1 CDS SAB0231 NC_007622.1 283450 284127 D hypothetical protein 283450..284127 Staphylococcus aureus RF122 3792751 YP_415737.1 CDS SAB0232 NC_007622.1 284127 284444 D hypothetical protein 284127..284444 Staphylococcus aureus RF122 3792752 YP_415738.1 CDS SAB0234 NC_007622.1 286309 286800 D hypothetical protein 286309..286800 Staphylococcus aureus RF122 3792754 YP_415739.1 CDS SAB0235 NC_007622.1 287002 287685 D hypothetical protein 287002..287685 Staphylococcus aureus RF122 3792755 YP_415740.1 CDS SAB0236 NC_007622.1 287954 288442 D hypothetical protein 287954..288442 Staphylococcus aureus RF122 3792756 YP_415741.1 CDS SAB0237 NC_007622.1 288660 289160 D hypothetical protein 288660..289160 Staphylococcus aureus RF122 3792757 YP_415742.1 CDS SAB0238 NC_007622.1 289171 289671 D hypothetical protein 289171..289671 Staphylococcus aureus RF122 3792758 YP_415743.2 CDS SAB0239 NC_007622.1 289682 290170 D hypothetical protein 289682..290170 Staphylococcus aureus RF122 3792759 YP_415744.1 CDS SAB0240 NC_007622.1 290773 291150 D hypothetical protein 290773..291150 Staphylococcus aureus RF122 3792760 YP_415745.1 CDS SAB0241 NC_007622.1 291321 291695 D hypothetical protein 291321..291695 Staphylococcus aureus RF122 3792761 YP_415746.1 CDS SAB0242c NC_007622.1 291949 292770 R formate/nitrate transporter complement(291949..292770) Staphylococcus aureus RF122 3792762 YP_415747.1 CDS SAB0243c NC_007622.1 293009 294316 R branched chain amino acid ABC transporter carrier protein complement(293009..294316) Staphylococcus aureus RF122 3792763 YP_415748.1 CDS SAB0244 NC_007622.1 294899 295789 D hypothetical protein 294899..295789 Staphylococcus aureus RF122 3792764 YP_415749.1 CDS SAB0245 NC_007622.1 296038 297087 D ABC transporter permease 296038..297087 Staphylococcus aureus RF122 3794515 YP_415750.1 CDS SAB0246 NC_007622.1 297100 297777 D ABC transporter ATP-binding protein 297100..297777 Staphylococcus aureus RF122 3794516 YP_415751.1 CDS SAB0247 NC_007622.1 297979 299016 D perfringolysin O regulatory protein 297979..299016 Staphylococcus aureus RF122 3794517 YP_415752.1 CDS SAB0248 NC_007622.1 299359 300477 D carbohydrate kinase 299359..300477 Staphylococcus aureus RF122 3794518 YP_415753.1 CDS SAB0249 NC_007622.1 300452 301375 D hypothetical protein 300452..301375 Staphylococcus aureus RF122 3794519 YP_415754.1 CDS SAB0250 NC_007622.1 301386 302606 D nucleoside transporter permease 301386..302606 Staphylococcus aureus RF122 3794520 YP_415755.1 CDS SAB0251c NC_007622.1 302711 304243 R transport protein complement(302711..304243) Staphylococcus aureus RF122 3794521 YP_415756.1 CDS SAB0252c NC_007622.1 304283 305164 R catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase complement(304283..305164) Staphylococcus aureus RF122 3794522 YP_415757.1 CDS SAB0253 NC_007622.1 305281 306183 D kinase 305281..306183 Staphylococcus aureus RF122 3794523 YP_415758.1 CDS SAB0254c NC_007622.1 306460 307260 R hypothetical protein complement(306460..307260) Staphylococcus aureus RF122 3794524 YP_415759.1 CDS SAB0255 NC_007622.1 307400 308068 D Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 307400..308068 Staphylococcus aureus RF122 3794525 YP_415760.1 CDS SAB0256c NC_007622.1 308198 309559 R hypothetical protein complement(308198..309559) Staphylococcus aureus RF122 3794526 YP_415761.1 CDS geh NC_007622.1 309929 311887 D glycerol ester hydrolase 309929..311887 Staphylococcus aureus RF122 3794358 YP_415762.1 CDS SAB0258c NC_007622.1 311957 313162 R phage-related integrase complement(311957..313162) Staphylococcus aureus RF122 3794527 YP_415763.1 CDS SAB0259c NC_007622.1 313262 313915 R hypothetical protein complement(313262..313915) Staphylococcus aureus RF122 3794528 YP_415764.1 CDS SAB0260 NC_007622.1 314357 314611 D phage-like protein 314357..314611 Staphylococcus aureus RF122 3794529 YP_415765.1 CDS SAB0261 NC_007622.1 314611 316077 D phage-like protein 314611..316077 Staphylococcus aureus RF122 3794530 YP_415766.1 CDS SAB0262 NC_007622.1 316077 316466 D phage-like protein 316077..316466 Staphylococcus aureus RF122 3794531 YP_415767.1 CDS SAB0263 NC_007622.1 316459 316623 D phage-like protein 316459..316623 Staphylococcus aureus RF122 3794532 YP_415768.1 CDS SAB0264 NC_007622.1 316669 316968 D phage-like protein 316669..316968 Staphylococcus aureus RF122 3794533 YP_415769.1 CDS SAB0265 NC_007622.1 317562 318794 D type-I specificity determinant subunit 317562..318794 Staphylococcus aureus RF122 3794534 YP_415770.1 CDS SAB0266 NC_007622.1 318846 319148 D phage-related holin 318846..319148 Staphylococcus aureus RF122 3792668 YP_415771.1 CDS SAB0268 NC_007622.1 320847 321056 D hypothetical protein 320847..321056 Staphylococcus aureus RF122 3792670 YP_415772.1 CDS SAB0269 NC_007622.1 321668 322255 D hypothetical protein 321668..322255 Staphylococcus aureus RF122 3792671 YP_415773.1 CDS SAB0270 NC_007622.1 322252 322707 D hypothetical protein 322252..322707 Staphylococcus aureus RF122 3792672 YP_415774.1 CDS SAB0271c NC_007622.1 323332 324159 R hypothetical protein complement(323332..324159) Staphylococcus aureus RF122 3792673 YP_415775.1 CDS SAB0272c NC_007622.1 324232 325431 R trimethylamine dehydrogenase complement(324232..325431) Staphylococcus aureus RF122 3792674 YP_415776.1 CDS SAB0273 NC_007622.1 325733 326734 D luciferase family protein 325733..326734 Staphylococcus aureus RF122 3792675 YP_415777.1 CDS SAB0274 NC_007622.1 326768 327100 D glycine cleavage system H protein 326768..327100 Staphylococcus aureus RF122 3792676 YP_415778.1 CDS SAB0275 NC_007622.1 327101 327901 D hypothetical protein 327101..327901 Staphylococcus aureus RF122 3792677 YP_415779.1 CDS SAB0276 NC_007622.1 327888 328835 D hypothetical protein 327888..328835 Staphylococcus aureus RF122 3792678 YP_415780.1 CDS SAB0277 NC_007622.1 328813 329835 D lipoate-protein ligase 328813..329835 Staphylococcus aureus RF122 3792679 YP_415781.1 CDS ulaA NC_007622.1 329979 331325 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(329979..331325) Staphylococcus aureus RF122 3792680 YP_415782.1 CDS SAB0279c NC_007622.1 331340 331624 R PTS system component complement(331340..331624) Staphylococcus aureus RF122 3792681 YP_415783.1 CDS SAB0280c NC_007622.1 331626 332069 R PTS system component complement(331626..332069) Staphylococcus aureus RF122 3792682 YP_415784.1 CDS SAB0281c NC_007622.1 332074 334029 R PTS system regulator complement(332074..334029) Staphylococcus aureus RF122 3792683 YP_415785.1 CDS SAB0282c NC_007622.1 334016 334237 R hypothetical protein complement(334016..334237) Staphylococcus aureus RF122 3792684 YP_415786.1 CDS SAB0283 NC_007622.1 334241 334660 D MarR family regulatory protein 334241..334660 Staphylococcus aureus RF122 3792685 YP_415787.1 CDS SAB0284 NC_007622.1 334767 336122 D hypothetical protein 334767..336122 Staphylococcus aureus RF122 3792686 YP_415788.1 CDS SAB0285 NC_007622.1 336229 336669 D hypothetical protein 336229..336669 Staphylococcus aureus RF122 3793524 YP_415789.1 CDS SAB0286c NC_007622.1 336753 338111 R glycerol-3-phosphate transporter complement(336753..338111) Staphylococcus aureus RF122 3793525 YP_415790.1 CDS SAB0287 NC_007622.1 338423 339349 D glyoxylase family protein 338423..339349 Staphylococcus aureus RF122 3793526 YP_415791.1 CDS SAB0288 NC_007622.1 339363 340424 D luciferase-like monooxygenase 339363..340424 Staphylococcus aureus RF122 3793527 YP_415792.1 CDS SAB0289 NC_007622.1 340438 341004 D NADH-dependent FMN reductase 340438..341004 Staphylococcus aureus RF122 3793528 YP_415793.1 CDS SAB0290c NC_007622.1 341064 342059 R hypothetical protein complement(341064..342059) Staphylococcus aureus RF122 3793529 YP_415794.1 CDS SAB0291 NC_007622.1 342058 342351 D hypothetical protein 342058..342351 Staphylococcus aureus RF122 3793530 YP_415795.1 CDS SAB0292 NC_007622.1 342364 342909 D serine N-acetyltransferase 342364..342909 Staphylococcus aureus RF122 3793531 YP_415796.1 CDS SAB0293 NC_007622.1 343174 344028 D lipoprotein 343174..344028 Staphylococcus aureus RF122 3793532 YP_415797.1 CDS SAB0295 NC_007622.1 345235 346947 D hypothetical protein 345235..346947 Staphylococcus aureus RF122 3793534 YP_415798.1 CDS SAB0296c NC_007622.1 347196 347897 R sec-independent protein translocase protein complement(347196..347897) Staphylococcus aureus RF122 3793535 YP_415799.1 CDS SAB0297c NC_007622.1 347914 348129 R protein translocase subunit complement(347914..348129) Staphylococcus aureus RF122 3793536 YP_415800.1 CDS SAB0298c NC_007622.1 348237 348626 R hypothetical protein complement(348237..348626) Staphylococcus aureus RF122 3793537 YP_415801.1 CDS SAB0299 NC_007622.1 348866 349069 D DNA-binding protein 348866..349069 Staphylococcus aureus RF122 3793538 YP_415802.1 CDS SAB0300 NC_007622.1 349066 349779 D hypothetical protein 349066..349779 Staphylococcus aureus RF122 3793539 YP_415803.1 CDS SAB0301 NC_007622.1 349804 350646 D ABC transporter ATP-binding protein 349804..350646 Staphylococcus aureus RF122 3793540 YP_415804.1 CDS SAB0302 NC_007622.1 350646 351275 D hypothetical protein 350646..351275 Staphylococcus aureus RF122 3793541 YP_415805.1 CDS SAB0303c NC_007622.1 351665 352798 R hypothetical protein complement(351665..352798) Staphylococcus aureus RF122 3793542 YP_415806.1 CDS th1 NC_007622.1 353336 354517 D acetyl-CoA acetyltransferase protein 353336..354517 Staphylococcus aureus RF122 3794322 YP_415807.1 CDS SAB0305c NC_007622.1 354600 355352 R hypothetical protein complement(354600..355352) Staphylococcus aureus RF122 3793543 YP_415808.1 CDS metE1 NC_007622.1 355395 357623 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(355395..357623) Staphylococcus aureus RF122 3792978 YP_415809.1 CDS metE2 NC_007622.1 357620 359461 R catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein complement(357620..359461) Staphylococcus aureus RF122 3792979 YP_415810.1 CDS SAB0308c NC_007622.1 359430 360590 R cystathionine beta-lyase complement(359430..360590) Staphylococcus aureus RF122 3794242 YP_415811.1 CDS SAB0309c NC_007622.1 360587 361690 R cystathionine gamma-synthase complement(360587..361690) Staphylococcus aureus RF122 3794243 YP_415812.1 CDS SAB0310 NC_007622.1 361898 362236 D hypothetical protein 361898..362236 Staphylococcus aureus RF122 3794244 YP_415813.1 CDS SAB0311 NC_007622.1 362354 363199 D hypothetical protein 362354..363199 Staphylococcus aureus RF122 3794245 YP_415814.1 CDS SAB0312 NC_007622.1 363353 364234 D hypothetical protein 363353..364234 Staphylococcus aureus RF122 3794246 YP_415815.1 CDS SAB0313 NC_007622.1 364264 364467 D hypothetical protein 364264..364467 Staphylococcus aureus RF122 3794247 YP_415816.1 CDS SAB0314 NC_007622.1 364479 365576 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 364479..365576 Staphylococcus aureus RF122 3794248 YP_415817.1 CDS SAB0315c NC_007622.1 365662 365853 R hypothetical protein complement(365662..365853) Staphylococcus aureus RF122 3794249 YP_415818.1 CDS rpsF NC_007622.1 366097 366393 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 366097..366393 Staphylococcus aureus RF122 3792937 YP_415819.1 CDS ssb NC_007622.1 366414 366917 D single-strand DNA-binding protein 366414..366917 Staphylococcus aureus RF122 3793015 YP_415820.1 CDS rpsR NC_007622.1 366969 367211 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 366969..367211 Staphylococcus aureus RF122 3794994 YP_415821.1 CDS SAB0319c NC_007622.1 367487 368479 R hypothetical protein complement(367487..368479) Staphylococcus aureus RF122 3794250 YP_415823.1 CDS SAB0321 NC_007622.1 369384 369995 D hypothetical protein 369384..369995 Staphylococcus aureus RF122 3794252 YP_415824.1 CDS SAB0322 NC_007622.1 370364 370732 D hypothetical protein 370364..370732 Staphylococcus aureus RF122 3794253 YP_415825.1 CDS SAB0323 NC_007622.1 370912 371484 D hypothetical protein 370912..371484 Staphylococcus aureus RF122 3794254 YP_415826.1 CDS SAB0324c NC_007622.1 371622 371885 R hypothetical protein complement(371622..371885) Staphylococcus aureus RF122 3794255 YP_415827.1 CDS SAB0325 NC_007622.1 372178 372432 D hypothetical protein 372178..372432 Staphylococcus aureus RF122 3794256 YP_415828.1 CDS SAB0326 NC_007622.1 372858 373439 D hypothetical protein 372858..373439 Staphylococcus aureus RF122 3794257 YP_415829.1 CDS SAB0327c NC_007622.1 373505 373897 R hypothetical protein complement(373505..373897) Staphylococcus aureus RF122 3794258 YP_415830.1 CDS SAB0328c NC_007622.1 374157 374783 R hypothetical protein complement(374157..374783) Staphylococcus aureus RF122 3794259 YP_415831.1 CDS SAB0329c NC_007622.1 374855 375148 R hypothetical protein complement(374855..375148) Staphylococcus aureus RF122 3794260 YP_415832.1 CDS ahpF NC_007622.1 375227 376750 R alkyl hydroperoxide reductase subunit F complement(375227..376750) Staphylococcus aureus RF122 3794893 YP_415833.1 CDS ahpC NC_007622.1 376766 377335 R alkyl hydroperoxide reductase subunit C complement(376766..377335) Staphylococcus aureus RF122 3794892 YP_415834.1 CDS SAB0332 NC_007622.1 377827 378582 D nitro/flavin reductase 377827..378582 Staphylococcus aureus RF122 3795197 YP_415835.1 CDS SAB0333c NC_007622.1 378662 380050 R proton/sodium-glutamate symport protein complement(378662..380050) Staphylococcus aureus RF122 3795198 YP_415836.1 CDS SAB0334c NC_007622.1 380315 380692 R hypothetical protein complement(380315..380692) Staphylococcus aureus RF122 3795199 YP_415837.1 CDS SAB0335c NC_007622.1 381031 381987 R hypothetical protein complement(381031..381987) Staphylococcus aureus RF122 3795200 YP_415838.1 CDS SAB0336c NC_007622.1 382105 382767 R hypothetical protein complement(382105..382767) Staphylococcus aureus RF122 3795201 YP_415839.1 CDS SAB0337c NC_007622.1 382910 383317 R hypothetical protein complement(382910..383317) Staphylococcus aureus RF122 3795202 YP_415840.1 CDS xpt NC_007622.1 383830 384408 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 383830..384408 Staphylococcus aureus RF122 3794177 YP_415841.1 CDS pbuX NC_007622.1 384408 385676 D xanthine permease 384408..385676 Staphylococcus aureus RF122 3794121 YP_415842.1 CDS guaB NC_007622.1 385714 387180 D inositol-monophosphate dehydrogenase 385714..387180 Staphylococcus aureus RF122 3794238 YP_415843.1 CDS guaA NC_007622.1 387205 388746 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 387205..388746 Staphylococcus aureus RF122 3794237 YP_415844.1 CDS SAB0342c NC_007622.1 388840 389976 R integrase complement(388840..389976) Staphylococcus aureus RF122 3795203 YP_415845.1 CDS SAB0343c NC_007622.1 390060 390845 R pathogenicity island protein complement(390060..390845) Staphylococcus aureus RF122 3795204 YP_415846.1 CDS SAB0344 NC_007622.1 390962 391189 D pathogenicity island protein 390962..391189 Staphylococcus aureus RF122 3795205 YP_415847.1 CDS SAB0345 NC_007622.1 391235 391495 D pathogenicity island protein 391235..391495 Staphylococcus aureus RF122 3795206 YP_415848.1 CDS SAB0346 NC_007622.1 391542 391697 D pathogenicity island protein 391542..391697 Staphylococcus aureus RF122 3795207 YP_415849.1 CDS SAB0347 NC_007622.1 391682 391885 D pathogenicity island protein 391682..391885 Staphylococcus aureus RF122 3795208 YP_415850.1 CDS SAB0348 NC_007622.1 391887 392270 D pathogenicity island protein 391887..392270 Staphylococcus aureus RF122 3795209 YP_415851.1 CDS SAB0349 NC_007622.1 392271 392588 D pathogenicity island protein 392271..392588 Staphylococcus aureus RF122 3795210 YP_415852.1 CDS SAB0350 NC_007622.1 392652 393521 D pathogenicity island protein 392652..393521 Staphylococcus aureus RF122 3795211 YP_415853.1 CDS SAB0351 NC_007622.1 393535 395244 D pathogenicity island protein 393535..395244 Staphylococcus aureus RF122 3795212 YP_415854.1 CDS SAB0352 NC_007622.1 395575 395955 D pathogenicity island protein 395575..395955 Staphylococcus aureus RF122 3795213 YP_415855.1 CDS SAB0353 NC_007622.1 395952 396593 D pathogenicity island protein 395952..396593 Staphylococcus aureus RF122 3795214 YP_415856.1 CDS SAB0354 NC_007622.1 396940 397281 D pathogenicity island protein 396940..397281 Staphylococcus aureus RF122 3795215 YP_415857.1 CDS SAB0355 NC_007622.1 397293 397871 D pathogenicity island protein 397293..397871 Staphylococcus aureus RF122 3795216 YP_415858.1 CDS SAB0356 NC_007622.1 397889 398107 D pathogenicity island protein 397889..398107 Staphylococcus aureus RF122 3793113 YP_415859.1 CDS SAB0357 NC_007622.1 398110 398685 D pathogenicity island protein 398110..398685 Staphylococcus aureus RF122 3793114 YP_415860.1 CDS SAB0358 NC_007622.1 398688 399029 D pathogenicity island protein 398688..399029 Staphylococcus aureus RF122 3793115 YP_415861.1 CDS SAB0359 NC_007622.1 399026 399595 D pathogenicity island protein 399026..399595 Staphylococcus aureus RF122 3793116 YP_415862.1 CDS tsst-1 NC_007622.1 399750 400454 R toxic shock syndrome toxin-1 complement(399750..400454) Staphylococcus aureus RF122 3795130 YP_415863.1 CDS SAB0361 NC_007622.1 400915 401265 D pathogenicity island protein 400915..401265 Staphylococcus aureus RF122 3793117 YP_415864.1 CDS SAB0362 NC_007622.1 401383 401895 D pathogenicity island protein 401383..401895 Staphylococcus aureus RF122 3793118 YP_415865.1 CDS sec-bov NC_007622.1 402652 403467 D enterotoxin C-bovine 402652..403467 Staphylococcus aureus RF122 3793185 YP_415866.1 CDS sel NC_007622.1 403634 404356 R enterotoxin L complement(403634..404356) Staphylococcus aureus RF122 3794617 YP_415867.1 CDS SAB0365c NC_007622.1 404861 405253 R hypothetical protein complement(404861..405253) Staphylococcus aureus RF122 3793119 YP_415868.1 CDS SAB0367c NC_007622.1 405878 406078 R hypothetical protein complement(405878..406078) Staphylococcus aureus RF122 3793121 YP_415869.1 CDS SAB0368 NC_007622.1 406679 406942 D hypothetical protein 406679..406942 Staphylococcus aureus RF122 3793122 YP_415870.1 CDS SAB0369c NC_007622.1 407602 408186 R hypothetical protein complement(407602..408186) Staphylococcus aureus RF122 3793123 YP_415871.1 CDS SAB0370 NC_007622.1 408432 408599 D hypothetical protein 408432..408599 Staphylococcus aureus RF122 3793124 YP_415872.1 CDS SAB0371 NC_007622.1 408681 409088 D hypothetical protein 408681..409088 Staphylococcus aureus RF122 3793125 YP_415873.1 CDS SAB0372 NC_007622.1 409135 409617 D hypothetical protein 409135..409617 Staphylococcus aureus RF122 3793126 YP_415874.1 CDS SAB0373c NC_007622.1 410029 410388 R hypothetical protein complement(410029..410388) Staphylococcus aureus RF122 3793127 YP_415875.1 CDS SAB0374c NC_007622.1 410464 411252 R hypothetical protein complement(410464..411252) Staphylococcus aureus RF122 3793128 YP_415876.1 CDS SAB0375c NC_007622.1 411321 411581 R hypothetical protein complement(411321..411581) Staphylococcus aureus RF122 3793129 YP_415877.1 CDS set11 NC_007622.1 411724 412404 D these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 411724..412404 Staphylococcus aureus RF122 3794624 YP_415878.1 CDS set10 NC_007622.1 412692 413387 D these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 412692..413387 Staphylococcus aureus RF122 3794623 YP_415879.1 CDS set9 NC_007622.1 413678 414724 D these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 413678..414724 Staphylococcus aureus RF122 3794630 YP_415880.1 CDS set7 NC_007622.1 415089 415739 D SSL5, SET3, SET10; bind P-selectin glycoprotein ligand-1 and inhibit P-selectin-mediated neutrophil rolling along the endothelium; these proteins share structural homology to known superantigens but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 5 415089..415739 Staphylococcus aureus RF122 3794629 YP_415881.1 CDS set5 NC_007622.1 416237 416932 D SSL7, SET1; blocks IgA-FcR interactions and inhibits complement, leading to increased survival of a sensitive bacterium in blood; superantigen-like protein 7 416237..416932 Staphylococcus aureus RF122 3794628 YP_415882.1 CDS set4 NC_007622.1 417271 417969 D these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 417271..417969 Staphylococcus aureus RF122 3794627 YP_415883.1 CDS set3 NC_007622.1 418346 419044 D these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 418346..419044 Staphylococcus aureus RF122 3794626 YP_415884.1 CDS set2 NC_007622.1 419410 420069 D these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 419410..420069 Staphylococcus aureus RF122 3794625 YP_415885.1 CDS hsdM NC_007622.1 420356 421912 D type I site-specific deoxyribonuclease 420356..421912 Staphylococcus aureus RF122 3794089 YP_415886.1 CDS set1 NC_007622.1 423535 424230 D these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 423535..424230 Staphylococcus aureus RF122 3794622 YP_415887.1 CDS SAB0387 NC_007622.1 424252 425760 D hypothetical protein 424252..425760 Staphylococcus aureus RF122 3793130 YP_415888.1 CDS SAB0388c NC_007622.1 425869 426177 R hypothetical protein complement(425869..426177) Staphylococcus aureus RF122 3793131 YP_415889.1 CDS SAB0389 NC_007622.1 426542 427324 D lipoprotein 426542..427324 Staphylococcus aureus RF122 3793151 YP_415890.1 CDS SAB0390 NC_007622.1 427372 427785 D lipoprotein 427372..427785 Staphylococcus aureus RF122 3793152 YP_415891.1 CDS SAB0391 NC_007622.1 427791 428153 D hypothetical protein 427791..428153 Staphylococcus aureus RF122 3793153 YP_415892.1 CDS SAB0392 NC_007622.1 428201 428986 D hypothetical protein 428201..428986 Staphylococcus aureus RF122 3793154 YP_415893.1 CDS SAB0393 NC_007622.1 429014 429784 D hypothetical protein 429014..429784 Staphylococcus aureus RF122 3793155 YP_415894.1 CDS SAB0394 NC_007622.1 429813 430607 D hypothetical protein 429813..430607 Staphylococcus aureus RF122 3793156 YP_415895.1 CDS SAB0395 NC_007622.1 430677 431453 D hypothetical protein 430677..431453 Staphylococcus aureus RF122 3793157 YP_415896.1 CDS SAB0396 NC_007622.1 431654 432442 D hypothetical protein 431654..432442 Staphylococcus aureus RF122 3793158 YP_415897.1 CDS SAB0397 NC_007622.1 432435 433760 D hypothetical protein 432435..433760 Staphylococcus aureus RF122 3793159 YP_415898.1 CDS SAB0398 NC_007622.1 433757 434080 D hypothetical protein 433757..434080 Staphylococcus aureus RF122 3793160 YP_415899.1 CDS SAB0400c NC_007622.1 434713 434907 R hypothetical protein complement(434713..434907) Staphylococcus aureus RF122 3793162 YP_415900.1 CDS SAB0401 NC_007622.1 435092 436294 D hypothetical protein 435092..436294 Staphylococcus aureus RF122 3793163 YP_415901.1 CDS SAB0402 NC_007622.1 437880 439364 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit 5 437880..439364 Staphylococcus aureus RF122 3793164 YP_415902.1 CDS SAB0403 NC_007622.1 439377 442082 D hypothetical protein 439377..442082 Staphylococcus aureus RF122 3793165 YP_415903.1 CDS SAB0404 NC_007622.1 442244 442606 D hypothetical protein 442244..442606 Staphylococcus aureus RF122 3793166 YP_415904.1 CDS SAB0405c NC_007622.1 442835 443170 R hypothetical protein complement(442835..443170) Staphylococcus aureus RF122 3793167 YP_415905.1 CDS SAB0406 NC_007622.1 443289 443963 D hypothetical protein 443289..443963 Staphylococcus aureus RF122 3793168 YP_415906.1 CDS SAB0407 NC_007622.1 444000 444734 D hypothetical protein 444000..444734 Staphylococcus aureus RF122 3793169 YP_415907.1 CDS SAB0408 NC_007622.1 445139 446479 D sodium-dependent transporter 445139..446479 Staphylococcus aureus RF122 3793170 YP_415908.1 CDS SAB0409 NC_007622.1 446675 447601 D cysteine synthase 446675..447601 Staphylococcus aureus RF122 3792706 YP_415909.1 CDS SAB0410 NC_007622.1 447594 448736 D cystathionine gamma-synthase 447594..448736 Staphylococcus aureus RF122 3792707 YP_415910.1 CDS SAB0411 NC_007622.1 449031 450056 D ABC transporter ATP-binding protein 449031..450056 Staphylococcus aureus RF122 3792708 YP_415911.1 CDS SAB0412 NC_007622.1 450060 450719 D ABC transporter ATP-binding protein 450060..450719 Staphylococcus aureus RF122 3792709 YP_415912.1 CDS SAB0413 NC_007622.1 450756 451598 D membrane lipoprotein 450756..451598 Staphylococcus aureus RF122 3792710 YP_415913.1 CDS SAB0414 NC_007622.1 451931 452938 D autolysin 451931..452938 Staphylococcus aureus RF122 3792711 YP_415914.1 CDS SAB0415c NC_007622.1 453125 453394 R hypothetical protein complement(453125..453394) Staphylococcus aureus RF122 3792712 YP_415915.1 CDS SAB0416 NC_007622.1 453535 453939 D hypothetical protein 453535..453939 Staphylococcus aureus RF122 3792713 YP_415916.1 CDS SAB0417 NC_007622.1 453929 454414 D hypothetical protein 453929..454414 Staphylococcus aureus RF122 3792714 YP_415917.1 CDS SAB0418c NC_007622.1 454583 455365 R hypothetical protein complement(454583..455365) Staphylococcus aureus RF122 3792715 YP_415918.1 CDS SAB0419c NC_007622.1 455362 456480 R hypothetical protein complement(455362..456480) Staphylococcus aureus RF122 3792716 YP_415919.1 CDS SAB0420c NC_007622.1 456595 457479 R transcriptional activator of glutamate synthase operon complement(456595..457479) Staphylococcus aureus RF122 3792717 YP_415920.1 CDS gltA NC_007622.1 457660 462159 D glutamate synthase large subunit 457660..462159 Staphylococcus aureus RF122 3793655 YP_415921.1 CDS gltD NC_007622.1 462177 463640 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 462177..463640 Staphylococcus aureus RF122 3793656 YP_415922.1 CDS SAB0423 NC_007622.1 464475 465902 D PTS system trehalose-specific IIBC component 464475..465902 Staphylococcus aureus RF122 3792718 YP_415923.1 CDS SAB0424 NC_007622.1 465966 467606 D alpha-glucosidase 465966..467606 Staphylococcus aureus RF122 3792719 YP_415924.1 CDS SAB0425 NC_007622.1 467652 468359 D trehalose operon transcriptional repressor 467652..468359 Staphylococcus aureus RF122 3792720 YP_415925.1 CDS SAB0426 NC_007622.1 469000 469524 D acetyltransferase family protein 469000..469524 Staphylococcus aureus RF122 3792721 YP_415926.1 CDS dnaX NC_007622.1 469593 471290 D DNA polymerase III gamma and tau subunits 469593..471290 Staphylococcus aureus RF122 3793350 YP_415927.1 CDS SAB0428 NC_007622.1 471380 471697 D hypothetical protein 471380..471697 Staphylococcus aureus RF122 3792722 YP_415928.1 CDS recR NC_007622.1 471704 472300 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 471704..472300 Staphylococcus aureus RF122 3794275 YP_415929.1 CDS SAB0430 NC_007622.1 478882 480219 D lysine decarboxylase 478882..480219 Staphylococcus aureus RF122 3792723 YP_415930.1 CDS tmk NC_007622.1 480221 480838 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 480221..480838 Staphylococcus aureus RF122 3794331 YP_415931.1 CDS SAB0432 NC_007622.1 480866 481195 D hypothetical protein 480866..481195 Staphylococcus aureus RF122 3792724 YP_415932.1 CDS holB NC_007622.1 481409 482335 D DNA polymerase III delta prime subunit 481409..482335 Staphylococcus aureus RF122 3794085 YP_415933.1 CDS SAB0434 NC_007622.1 482336 483139 D signal peptidase II 482336..483139 Staphylococcus aureus RF122 3793229 YP_415934.1 CDS SAB0435 NC_007622.1 483156 483503 D in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 483156..483503 Staphylococcus aureus RF122 3793230 YP_415935.1 CDS SAB0436 NC_007622.1 483777 484502 D hypothetical protein 483777..484502 Staphylococcus aureus RF122 3793231 YP_415936.1 CDS SAB0437 NC_007622.1 484495 484743 D hypothetical protein 484495..484743 Staphylococcus aureus RF122 3793232 YP_415937.1 CDS SAB0438 NC_007622.1 484745 485584 D tetrapyrrole methylase family protein 484745..485584 Staphylococcus aureus RF122 3793233 YP_415938.1 CDS metG NC_007622.1 485869 487842 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 485869..487842 Staphylococcus aureus RF122 3792980 YP_415939.1 CDS SAB0440 NC_007622.1 487873 488646 D sec-independent hydrolase 487873..488646 Staphylococcus aureus RF122 3793234 YP_415940.1 CDS SAB0441 NC_007622.1 488813 489349 D hypothetical protein 488813..489349 Staphylococcus aureus RF122 3793235 YP_415941.1 CDS ksgA NC_007622.1 489342 490253 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 489342..490253 Staphylococcus aureus RF122 3793236 YP_415942.1 CDS SAB0443 NC_007622.1 490353 490616 D hypothetical protein 490353..490616 Staphylococcus aureus RF122 3793237 YP_415943.1 CDS ipk NC_007622.1 490926 491774 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 490926..491774 Staphylococcus aureus RF122 3793238 YP_415944.1 CDS purR NC_007622.1 491788 492612 D pur operon repressor 491788..492612 Staphylococcus aureus RF122 3794682 YP_415945.1 CDS yabJ NC_007622.1 492629 493009 D translation initiation inhibitor 492629..493009 Staphylococcus aureus RF122 3794178 YP_415946.1 CDS spoVG NC_007622.1 493081 493383 D stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 493081..493383 Staphylococcus aureus RF122 3793007 YP_415947.1 CDS glmU NC_007622.1 493720 495078 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 493720..495078 Staphylococcus aureus RF122 3794355 YP_415948.1 CDS prs NC_007622.1 495225 496190 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 495225..496190 Staphylococcus aureus RF122 3794038 YP_415949.1 CDS prs NC_007622.1 496340 496993 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 496340..496993 Staphylococcus aureus RF122 3794039 YP_415950.1 CDS SAB0451 NC_007622.1 497304 497876 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 497304..497876 Staphylococcus aureus RF122 3793239 YP_415951.1 CDS SAB0452 NC_007622.1 497876 501382 D transcription-repair coupling factor 497876..501382 Staphylococcus aureus RF122 3793240 YP_415952.1 CDS SAB0453 NC_007622.1 501372 502898 D membrane spanning protein 501372..502898 Staphylococcus aureus RF122 3793241 YP_415953.1 CDS SAB0454 NC_007622.1 502898 504091 D tetrapyrrole methylase 502898..504091 Staphylococcus aureus RF122 3793242 YP_415954.1 CDS SAB0455 NC_007622.1 504088 504351 D hypothetical protein 504088..504351 Staphylococcus aureus RF122 3793243 YP_415955.1 CDS SAB0456 NC_007622.1 504369 504761 D hypothetical protein 504369..504761 Staphylococcus aureus RF122 3793244 YP_415956.1 CDS SAB0457 NC_007622.1 504866 505267 D hypothetical protein 504866..505267 Staphylococcus aureus RF122 3793245 YP_415957.1 CDS SAB0458 NC_007622.1 505447 506742 D hypothetical protein 505447..506742 Staphylococcus aureus RF122 3793246 YP_415958.1 CDS hpt NC_007622.1 506747 507286 D hypoxanthine-guanine phosphoribosyltransferase 506747..507286 Staphylococcus aureus RF122 3794087 YP_415959.1 CDS ftsH NC_007622.1 507544 509637 D cell division protein 507544..509637 Staphylococcus aureus RF122 3794345 YP_415960.1 CDS hslO NC_007622.1 510107 510988 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 510107..510988 Staphylococcus aureus RF122 3793247 YP_415961.1 CDS SAB0462 NC_007622.1 511167 512099 D cysteine synthase 511167..512099 Staphylococcus aureus RF122 3793248 YP_415962.1 CDS folP NC_007622.1 512315 513118 D dihydropteroate synthase 512315..513118 Staphylococcus aureus RF122 3794340 YP_415963.1 CDS folB NC_007622.1 513096 513461 D dihydroneopterin aldolase 513096..513461 Staphylococcus aureus RF122 3794747 YP_415964.1 CDS folK NC_007622.1 513458 513934 D 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 513458..513934 Staphylococcus aureus RF122 3794750 YP_415965.1 CDS lysS NC_007622.1 514473 515960 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 514473..515960 Staphylococcus aureus RF122 3794764 YP_415966.1 CDS SAB0468c NC_007622.1 524654 526036 R GntR family transcriptional regulator complement(524654..526036) Staphylococcus aureus RF122 3793584 YP_415967.1 CDS SAB0469 NC_007622.1 526153 527028 D with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 526153..527028 Staphylococcus aureus RF122 3793585 YP_415968.1 CDS SAB0470 NC_007622.1 527032 527592 D with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 527032..527592 Staphylococcus aureus RF122 3793586 YP_415969.1 CDS nupC NC_007622.1 527800 529014 R pyrimidine nucleoside transport protein complement(527800..529014) Staphylococcus aureus RF122 3793628 YP_415970.1 CDS SAB0472 NC_007622.1 529172 529633 D transcriptional repressor of stress genes 529172..529633 Staphylococcus aureus RF122 3793587 YP_415971.1 CDS SAB0473 NC_007622.1 529652 530218 D hypothetical protein 529652..530218 Staphylococcus aureus RF122 3793588 YP_415972.1 CDS SAB0474 NC_007622.1 530208 531215 D ATP:guanido phosphotransferase 530208..531215 Staphylococcus aureus RF122 3793589 YP_415973.1 CDS clpC NC_007622.1 531229 533685 D endopeptidase 531229..533685 Staphylococcus aureus RF122 3794833 YP_415974.1 CDS radA NC_007622.1 534176 535540 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 534176..535540 Staphylococcus aureus RF122 3794269 YP_415975.1 CDS SAB0477 NC_007622.1 535565 536638 D hypothetical protein 535565..536638 Staphylococcus aureus RF122 3793590 YP_415976.1 CDS gltX NC_007622.1 537195 538649 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 537195..538649 Staphylococcus aureus RF122 3793658 YP_415977.1 CDS cysE NC_007622.1 539073 539720 D serine acetyltransferase 539073..539720 Staphylococcus aureus RF122 3795284 YP_415978.1 CDS cysS NC_007622.1 539704 541104 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 539704..541104 Staphylococcus aureus RF122 3795286 YP_415979.1 CDS SAB0481 NC_007622.1 541097 541501 D hypothetical protein 541097..541501 Staphylococcus aureus RF122 3793591 YP_415980.1 CDS SAB0482 NC_007622.1 541509 542255 D tRNA/rRNA methyltransferase 541509..542255 Staphylococcus aureus RF122 3793592 YP_415981.1 CDS SAB0483 NC_007622.1 542255 542779 D hypothetical protein 542255..542779 Staphylococcus aureus RF122 3793593 YP_415982.1 CDS SAB0484 NC_007622.1 542860 543429 D hypothetical protein 542860..543429 Staphylococcus aureus RF122 3793594 YP_415983.1 CDS rpmG NC_007622.1 543544 543687 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 543544..543687 Staphylococcus aureus RF122 3792922 YP_415984.1 CDS secE NC_007622.1 543743 543925 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 543743..543925 Staphylococcus aureus RF122 3793189 YP_415985.1 CDS nusG NC_007622.1 543938 544486 D transcription antitermination protein 543938..544486 Staphylococcus aureus RF122 3793630 YP_415986.1 CDS rplK NC_007622.1 544667 545089 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 544667..545089 Staphylococcus aureus RF122 3795084 YP_415987.1 CDS rplA NC_007622.1 545297 545989 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 545297..545989 Staphylococcus aureus RF122 3793107 YP_415988.1 CDS rplJ NC_007622.1 546261 546761 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 546261..546761 Staphylococcus aureus RF122 3795083 YP_415990.1 CDS SAB0492 NC_007622.1 547344 547952 D hypothetical protein 547344..547952 Staphylococcus aureus RF122 3793595 YP_415991.1 CDS rpoB NC_007622.1 548167 551718 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 548167..551718 Staphylococcus aureus RF122 3792928 YP_415992.1 CDS rpoC NC_007622.1 551855 555478 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 551855..555478 Staphylococcus aureus RF122 3792929 YP_415993.1 CDS SAB0495 NC_007622.1 555600 555869 D in Bacillus subtilis this non-essential protein associates with the ribosome; ribosomal protein L7Ae-like 555600..555869 Staphylococcus aureus RF122 3793596 YP_415994.1 CDS rpsL NC_007622.1 555967 556380 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 555967..556380 Staphylococcus aureus RF122 3794987 YP_415995.1 CDS rpsG NC_007622.1 556446 556916 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 556446..556916 Staphylococcus aureus RF122 3792938 YP_415996.1 CDS fus NC_007622.1 557039 559120 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 557039..559120 Staphylococcus aureus RF122 3794348 YP_415997.1 CDS tuf NC_007622.1 559337 560521 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 559337..560521 Staphylococcus aureus RF122 3795131 YP_415998.1 CDS SAB0500c NC_007622.1 560803 561978 R N-acyl-L-amino acid amidohydrolase complement(560803..561978) Staphylococcus aureus RF122 3793597 YP_415999.1 CDS kbl NC_007622.1 562149 563336 D catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 562149..563336 Staphylococcus aureus RF122 3795273 YP_416000.1 CDS SAB0502 NC_007622.1 563603 564481 D Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; chaperone protein HchA 563603..564481 Staphylococcus aureus RF122 3793598 YP_416001.1 CDS SAB0503 NC_007622.1 564640 566277 D catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 564640..566277 Staphylococcus aureus RF122 3793599 YP_416002.1 CDS SAB0504 NC_007622.1 566491 567456 D L-threonine 3-dehydrogenase 566491..567456 Staphylococcus aureus RF122 3793600 YP_416003.1 CDS SAB0505 NC_007622.1 567791 568867 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 567791..568867 Staphylococcus aureus RF122 3793601 YP_416004.1 CDS SAB0506 NC_007622.1 569118 569801 D hypothetical protein 569118..569801 Staphylococcus aureus RF122 3794712 YP_416005.1 CDS SAB0507c NC_007622.1 569917 570579 R deoxypurine kinase subunit complement(569917..570579) Staphylococcus aureus RF122 3794713 YP_416006.1 CDS SAB0508c NC_007622.1 570572 571189 R deoxypurine kinase subunit complement(570572..571189) Staphylococcus aureus RF122 3794714 YP_416007.1 CDS SAB0510 NC_007622.1 571874 572743 D hypothetical protein 571874..572743 Staphylococcus aureus RF122 3794716 YP_416008.1 CDS SAB0511 NC_007622.1 572763 573329 D hypothetical protein 572763..573329 Staphylococcus aureus RF122 3794717 YP_416009.1 CDS SAB0513 NC_007622.1 577061 580402 D Ser-Asp rich fibrinogen-binding/bone sialoprotein-binding protein 577061..580402 Staphylococcus aureus RF122 3794718 YP_416010.1 CDS SAB0514 NC_007622.1 580521 581993 D poly(glycerol-phosphate) alpha-glucosyltransferase 580521..581993 Staphylococcus aureus RF122 3794719 YP_416011.1 CDS SAB0515c NC_007622.1 582117 583610 R poly(glycerol-phosphate) alpha-glucosyltransferase complement(582117..583610) Staphylococcus aureus RF122 3794720 YP_416012.1 CDS SAB0516c NC_007622.1 583893 584771 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase complement(583893..584771) Staphylococcus aureus RF122 3794721 YP_416013.1 CDS SAB0517c NC_007622.1 584784 585449 R hypothetical protein complement(584784..585449) Staphylococcus aureus RF122 3794722 YP_416014.1 CDS SAB0518c NC_007622.1 585463 585822 R hypothetical protein complement(585463..585822) Staphylococcus aureus RF122 3794723 YP_416015.1 CDS SAB0519 NC_007622.1 586101 586859 D glucosamine-6-phosphate deaminase 586101..586859 Staphylococcus aureus RF122 3794724 YP_416016.1 CDS SAB0520 NC_007622.1 586936 587568 D 3-hexulose-6-phosphate synthase 586936..587568 Staphylococcus aureus RF122 3794725 YP_416017.1 CDS SAB0521 NC_007622.1 587570 588118 D 6-phospho-3-hexuloisomerase 587570..588118 Staphylococcus aureus RF122 3794726 YP_416018.1 CDS SAB0522 NC_007622.1 588231 588878 D hypothetical protein 588231..588878 Staphylococcus aureus RF122 3794727 YP_416019.1 CDS proP NC_007622.1 589380 590780 D proline/betaine transporter 589380..590780 Staphylococcus aureus RF122 3794036 YP_416020.1 CDS SAB0524 NC_007622.1 591030 591242 D hypothetical protein 591030..591242 Staphylococcus aureus RF122 3794728 YP_416021.1 CDS SAB0525 NC_007622.1 591323 592699 D long chain fatty acid CoA ligase 591323..592699 Staphylococcus aureus RF122 3794729 YP_416022.1 CDS SAB0526 NC_007622.1 592701 593840 D acetyl-CoA c-acetyltransferase 592701..593840 Staphylococcus aureus RF122 3794730 YP_416023.1 CDS SAB0527 NC_007622.1 593815 594180 D hypothetical protein 593815..594180 Staphylococcus aureus RF122 3794731 YP_416024.1 CDS SAB0528 NC_007622.1 594183 594461 D hypothetical protein 594183..594461 Staphylococcus aureus RF122 3795140 YP_416025.1 CDS SAB0529c NC_007622.1 594652 594819 R hypothetical protein complement(594652..594819) Staphylococcus aureus RF122 3795141 YP_416026.1 CDS SAB0530c NC_007622.1 595352 596182 R phosphomethylpyrimidine kinase complement(595352..596182) Staphylococcus aureus RF122 3795142 YP_416027.1 CDS ung NC_007622.1 596366 597022 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 596366..597022 Staphylococcus aureus RF122 3795135 YP_416028.1 CDS SAB0532 NC_007622.1 597023 597403 D hypothetical protein 597023..597403 Staphylococcus aureus RF122 3795143 YP_416029.1 CDS SAB0533 NC_007622.1 597536 597904 D hypothetical protein 597536..597904 Staphylococcus aureus RF122 3795144 YP_416030.1 CDS SAB0534 NC_007622.1 598025 599509 D amino acid transporter 598025..599509 Staphylococcus aureus RF122 3795145 YP_416031.1 CDS SAB0535c NC_007622.1 599651 600103 R hypothetical protein complement(599651..600103) Staphylococcus aureus RF122 3795146 YP_416032.1 CDS SAB0536c NC_007622.1 600116 600880 R hypothetical protein complement(600116..600880) Staphylococcus aureus RF122 3795147 YP_416033.1 CDS SAB0537c NC_007622.1 601427 602179 R heme peroxidase complement(601427..602179) Staphylococcus aureus RF122 3795148 YP_416034.1 CDS eutD NC_007622.1 602347 603333 D in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 602347..603333 Staphylococcus aureus RF122 3794040 YP_416035.1 CDS SAB0539 NC_007622.1 603336 604172 D lipoate-protein ligase A protein 603336..604172 Staphylococcus aureus RF122 3795149 YP_416036.1 CDS mvaK1 NC_007622.1 604759 605679 D mevalonate kinase 604759..605679 Staphylococcus aureus RF122 3794137 YP_416037.1 CDS mvaD NC_007622.1 605684 606667 D mevalonate diphosphate decarboxylase 605684..606667 Staphylococcus aureus RF122 3794136 YP_416038.1 CDS mvaK2 NC_007622.1 606680 607756 D phosphomevalonate kinase 606680..607756 Staphylococcus aureus RF122 3794138 YP_416039.1 CDS SAB0543 NC_007622.1 607933 608274 D hypothetical protein 607933..608274 Staphylococcus aureus RF122 3795150 YP_416040.1 CDS SAB0544c NC_007622.1 608326 609648 R mercury(II) reductase complement(608326..609648) Staphylococcus aureus RF122 3795151 YP_416041.1 CDS SAB0545c NC_007622.1 609635 610075 R hypothetical protein complement(609635..610075) Staphylococcus aureus RF122 3795152 YP_416042.1 CDS SAB0546 NC_007622.1 610699 612096 D hypothetical protein 610699..612096 Staphylococcus aureus RF122 3795153 YP_416043.1 CDS SAB0547 NC_007622.1 612100 612729 D hypothetical protein 612100..612729 Staphylococcus aureus RF122 3795154 YP_416044.1 CDS SAB0548 NC_007622.1 613195 613824 D hypothetical protein 613195..613824 Staphylococcus aureus RF122 3795155 YP_416045.1 CDS SAB0549 NC_007622.1 614042 614590 D hypothetical protein 614042..614590 Staphylococcus aureus RF122 3795156 YP_416046.1 CDS SAB0550 NC_007622.1 614627 615169 D hypothetical protein 614627..615169 Staphylococcus aureus RF122 3795157 YP_416047.1 CDS SAB0551 NC_007622.1 615494 616120 D hypothetical protein 615494..616120 Staphylococcus aureus RF122 3795158 YP_416048.1 CDS SAB0552 NC_007622.1 616390 617328 D oxidoreductase 616390..617328 Staphylococcus aureus RF122 3793368 YP_416049.1 CDS SAB0553 NC_007622.1 617538 618074 D hypothetical protein 617538..618074 Staphylococcus aureus RF122 3793369 YP_416050.1 CDS SAB0554 NC_007622.1 618243 618719 D hypothetical protein 618243..618719 Staphylococcus aureus RF122 3793370 YP_416051.1 CDS SAB0555 NC_007622.1 618759 620054 D hypothetical protein 618759..620054 Staphylococcus aureus RF122 3793371 YP_416052.1 CDS SAB0556 NC_007622.1 620097 620603 D hypothetical protein 620097..620603 Staphylococcus aureus RF122 3793372 YP_416053.1 CDS adhA NC_007622.1 621102 622112 D similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 621102..622112 Staphylococcus aureus RF122 3794829 YP_416054.1 CDS SAB0558 NC_007622.1 622375 622803 D hypothetical protein 622375..622803 Staphylococcus aureus RF122 3793373 YP_416055.1 CDS argS NC_007622.1 622800 624461 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 622800..624461 Staphylococcus aureus RF122 3793374 YP_416056.1 CDS SAB0561 NC_007622.1 626171 626806 D DNA repair endonuclease 626171..626806 Staphylococcus aureus RF122 3793376 YP_416057.1 CDS SAB0562 NC_007622.1 627054 627941 D similar to Bacillus spp. YvrC protein; iron-binding transport protein 627054..627941 Staphylococcus aureus RF122 3793377 YP_416058.1 CDS SAB0563 NC_007622.1 628092 629042 D similar to Bacillus spp. YvrB protein; iron(III) ABC transporter permease protein 628092..629042 Staphylococcus aureus RF122 3793378 YP_416059.1 CDS SAB0564 NC_007622.1 629097 629816 D haloacid dehalogenase hydrolase 629097..629816 Staphylococcus aureus RF122 3793379 YP_416060.1 CDS SAB0565 NC_007622.1 629800 630600 D hydrolase 629800..630600 Staphylococcus aureus RF122 3793380 YP_416061.1 CDS SAB0566 NC_007622.1 630736 631242 D hypothetical protein 630736..631242 Staphylococcus aureus RF122 3793381 YP_416062.1 CDS SAB0567 NC_007622.1 631404 632120 D hypothetical protein 631404..632120 Staphylococcus aureus RF122 3793382 YP_416063.1 CDS SAB0568 NC_007622.1 632288 633076 D esterase or lipase 632288..633076 Staphylococcus aureus RF122 3793383 YP_416064.1 CDS sarA NC_007622.1 633329 633703 R accessory regulator A complement(633329..633703) Staphylococcus aureus RF122 3793173 YP_416065.1 CDS SAB0570c NC_007622.1 634651 635580 R hypothetical protein complement(634651..635580) Staphylococcus aureus RF122 3793384 YP_416066.1 CDS SAB0572 NC_007622.1 636378 636938 D phage recombinase/integrase 636378..636938 Staphylococcus aureus RF122 3793386 YP_416067.1 CDS SAB0573 NC_007622.1 636957 639359 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 636957..639359 Staphylococcus aureus RF122 3793387 YP_416068.1 CDS SAB0574 NC_007622.1 639346 639771 D subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 639346..639771 Staphylococcus aureus RF122 3794925 YP_416069.1 CDS SAB0575 NC_007622.1 639768 640112 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 639768..640112 Staphylococcus aureus RF122 3794926 YP_416070.1 CDS SAB0576 NC_007622.1 640102 641598 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit D 640102..641598 Staphylococcus aureus RF122 3794927 YP_416071.1 CDS SAB0577 NC_007622.1 641599 642081 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 641599..642081 Staphylococcus aureus RF122 3794928 YP_416072.1 CDS SAB0578 NC_007622.1 642078 642380 D subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 642078..642380 Staphylococcus aureus RF122 3794929 YP_416073.1 CDS SAB0579 NC_007622.1 642355 642792 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 642355..642792 Staphylococcus aureus RF122 3794930 YP_416074.1 CDS SAB0580 NC_007622.1 643132 645174 D sodium-hydrogen exhange family protein 643132..645174 Staphylococcus aureus RF122 3794931 YP_416075.1 CDS mntC NC_007622.1 646068 646997 R iron-repressed lipoprotein complement(646068..646997) Staphylococcus aureus RF122 3792991 YP_416076.1 CDS mntB NC_007622.1 646994 647830 R cation ABC transporter complement(646994..647830) Staphylococcus aureus RF122 3792990 YP_416077.1 CDS mntA NC_007622.1 647824 648567 R cation ATP-binding ABC transporter complement(647824..648567) Staphylococcus aureus RF122 3792989 YP_416078.1 CDS mntR NC_007622.1 648689 649333 D iron dependent repressor 648689..649333 Staphylococcus aureus RF122 3792992 YP_416079.1 CDS SAB0585c NC_007622.1 649413 650165 R hypothetical protein complement(649413..650165) Staphylococcus aureus RF122 3794932 YP_416080.1 CDS tagA NC_007622.1 650401 651165 D teichoic acid biosynthesis protein 650401..651165 Staphylococcus aureus RF122 3793317 YP_416081.1 CDS tagH NC_007622.1 651226 652041 R with TagG is involved in the export of teichoic acids; teichoic acids export protein ATP-binding subunit complement(651226..652041) Staphylococcus aureus RF122 3793321 YP_416082.1 CDS tagG NC_007622.1 652346 653179 D teichoic acid translocation permease protein 652346..653179 Staphylococcus aureus RF122 3793320 YP_416083.1 CDS tagB NC_007622.1 653278 654381 D teichoic acid biosynthesis protein 653278..654381 Staphylococcus aureus RF122 3793318 YP_416084.1 CDS SAB0590 NC_007622.1 654378 655439 D teichoic acid biosynthesis enzyme 654378..655439 Staphylococcus aureus RF122 3794933 YP_416085.1 CDS tagD NC_007622.1 655502 655900 D glycerol-3-phosphate cytidylyltransferase 655502..655900 Staphylococcus aureus RF122 3793319 YP_416086.1 CDS pbp4 NC_007622.1 656017 657312 R penicillin binding protein 4 complement(656017..657312) Staphylococcus aureus RF122 3794118 YP_416087.1 CDS SAB0593 NC_007622.1 657733 659460 D ATP-binding cassette transporter A 657733..659460 Staphylococcus aureus RF122 3794934 YP_416088.1 CDS SAB0594 NC_007622.1 659815 661044 D nucleoside transport protein 659815..661044 Staphylococcus aureus RF122 3794935 YP_416089.1 CDS SAB0595 NC_007622.1 661569 662402 D hypothetical protein 661569..662402 Staphylococcus aureus RF122 3794936 YP_416090.1 CDS fhuA NC_007622.1 662682 663479 D ferrichrome transport ATP-binding protein 662682..663479 Staphylococcus aureus RF122 3794735 YP_416091.1 CDS fhuB NC_007622.1 663515 664519 D ferrichrome transport permease 663515..664519 Staphylococcus aureus RF122 3794736 YP_416092.1 CDS fhuD NC_007622.1 664516 665532 D ferrichrome transport permease 664516..665532 Staphylococcus aureus RF122 3794737 YP_416093.1 CDS SAB0599 NC_007622.1 665766 666734 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 665766..666734 Staphylococcus aureus RF122 3794937 YP_416094.1 CDS SAB0600 NC_007622.1 666776 667360 D dihydroxyacetone kinase 666776..667360 Staphylococcus aureus RF122 3794938 YP_416095.1 CDS SAB0601 NC_007622.1 667353 667715 D phosphotransferase mannnose-specific family component IIA 667353..667715 Staphylococcus aureus RF122 3794939 YP_416096.1 CDS SAB0602 NC_007622.1 667831 668328 D hypothetical protein 667831..668328 Staphylococcus aureus RF122 3794940 YP_416097.1 CDS SAB0603 NC_007622.1 668785 669852 D hypothetical protein 668785..669852 Staphylococcus aureus RF122 3794941 YP_416098.1 CDS SAB0604 NC_007622.1 670003 671046 D lipase 670003..671046 Staphylococcus aureus RF122 3794942 YP_416099.1 CDS SAB0605 NC_007622.1 671375 671803 D hypothetical protein 671375..671803 Staphylococcus aureus RF122 3794943 YP_416100.1 CDS SAB0606c NC_007622.1 672010 672516 R hypothetical protein complement(672010..672516) Staphylococcus aureus RF122 3793927 YP_416101.1 CDS SAB0607 NC_007622.1 672629 673552 D hypothetical protein 672629..673552 Staphylococcus aureus RF122 3793928 YP_416102.1 CDS SAB0608 NC_007622.1 673568 674242 D two-component response regulator 673568..674242 Staphylococcus aureus RF122 3793929 YP_416103.1 CDS SAB0609 NC_007622.1 674235 675275 D two-component sensor histidine kinase 674235..675275 Staphylococcus aureus RF122 3793930 YP_416104.1 CDS SAB0610 NC_007622.1 675419 676180 D ATP-binding ABC transport protein 675419..676180 Staphylococcus aureus RF122 3793931 YP_416105.1 CDS SAB0611 NC_007622.1 676170 678059 D ABC transporter permease 676170..678059 Staphylococcus aureus RF122 3793932 YP_416106.1 CDS SAB0612 NC_007622.1 678784 679401 D hypothetical protein 678784..679401 Staphylococcus aureus RF122 3793933 YP_416107.1 CDS SAB0613 NC_007622.1 679417 680424 D low-affinity inorganic phosphate transporter 679417..680424 Staphylococcus aureus RF122 3793934 YP_416108.1 CDS SAB0614c NC_007622.1 681011 681808 R secretory antigen SsaA-like protein complement(681011..681808) Staphylococcus aureus RF122 3793935 YP_416109.1 CDS SAB0615 NC_007622.1 682169 682813 D hypothetical protein 682169..682813 Staphylococcus aureus RF122 3793936 YP_416110.1 CDS SAB0616 NC_007622.1 683507 685657 D transcriptional regulator 683507..685657 Staphylococcus aureus RF122 3793937 YP_416111.1 CDS SAB0617 NC_007622.1 685737 686162 D hypothetical protein 685737..686162 Staphylococcus aureus RF122 3793938 YP_416112.1 CDS SAB0618 NC_007622.1 686352 687068 D hypothetical protein 686352..687068 Staphylococcus aureus RF122 3793939 YP_416113.1 CDS SAB0619 NC_007622.1 687068 687541 D hypothetical protein 687068..687541 Staphylococcus aureus RF122 3793940 YP_416114.1 CDS SAB0620 NC_007622.1 687894 688538 D hypothetical protein 687894..688538 Staphylococcus aureus RF122 3793941 YP_416115.1 CDS SAB0621 NC_007622.1 688654 689520 D LysR family transcriptional regulator 688654..689520 Staphylococcus aureus RF122 3793942 YP_416116.1 CDS SAB0622 NC_007622.1 689654 690874 D sugar efflux transporter 689654..690874 Staphylococcus aureus RF122 3793943 YP_416117.1 CDS SAB0623 NC_007622.1 690871 691359 D hypothetical protein 690871..691359 Staphylococcus aureus RF122 3793944 YP_416118.1 CDS SAB0624c NC_007622.1 691458 692147 R hypothetical protein complement(691458..692147) Staphylococcus aureus RF122 3793945 YP_416119.1 CDS SAB0625 NC_007622.1 692274 692717 D hypothetical protein 692274..692717 Staphylococcus aureus RF122 3793946 YP_416120.1 CDS SAB0626 NC_007622.1 692790 693179 D hypothetical protein 692790..693179 Staphylococcus aureus RF122 3792765 YP_416121.1 CDS SAB0627 NC_007622.1 693317 693616 D hypothetical protein 693317..693616 Staphylococcus aureus RF122 3792766 YP_416122.1 CDS SAB0628 NC_007622.1 693696 694238 D hypothetical protein 693696..694238 Staphylococcus aureus RF122 3792767 YP_416123.1 CDS SAB0629c NC_007622.1 694334 694900 R hypothetical protein complement(694334..694900) Staphylococcus aureus RF122 3792768 YP_416124.1 CDS SAB0630c NC_007622.1 694902 695360 R hypothetical protein complement(694902..695360) Staphylococcus aureus RF122 3792769 YP_416125.1 CDS SAB0631c NC_007622.1 695369 696178 R hypothetical protein complement(695369..696178) Staphylococcus aureus RF122 3792770 YP_416126.1 CDS bacA NC_007622.1 696217 697092 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(696217..697092) Staphylococcus aureus RF122 3792657 YP_416127.1 CDS SAB0633 NC_007622.1 697311 698942 D ABC transporter ATP-binding protein 697311..698942 Staphylococcus aureus RF122 3792771 YP_416128.1 CDS SAB0634 NC_007622.1 698939 700612 D ABC transporter ATP-binding protein 698939..700612 Staphylococcus aureus RF122 3792772 YP_416129.1 CDS SAB0635c NC_007622.1 700739 701182 R MarR family transcriptional regulator complement(700739..701182) Staphylococcus aureus RF122 3792773 YP_416130.1 CDS SAB0636 NC_007622.1 701409 702335 D cobalamin synthesis-related protein 701409..702335 Staphylococcus aureus RF122 3792774 YP_416131.1 CDS SAB0637 NC_007622.1 702438 703346 D oxidoreductase 702438..703346 Staphylococcus aureus RF122 3792775 YP_416132.1 CDS SAB0638 NC_007622.1 703381 703668 D hypothetical protein 703381..703668 Staphylococcus aureus RF122 3792776 YP_416133.1 CDS SAB0639 NC_007622.1 703951 705504 D membrane transporter 703951..705504 Staphylococcus aureus RF122 3792777 YP_416134.1 CDS SAB0640 NC_007622.1 705584 706963 D DNA photolyase 705584..706963 Staphylococcus aureus RF122 3792778 YP_416135.1 CDS SAB0641c NC_007622.1 707035 707319 R hypothetical protein complement(707035..707319) Staphylococcus aureus RF122 3792779 YP_416136.1 CDS SAB0642c NC_007622.1 707316 707933 R hypothetical protein complement(707316..707933) Staphylococcus aureus RF122 3792780 YP_416137.1 CDS SAB0643c NC_007622.1 708120 708542 R hypothetical protein complement(708120..708542) Staphylococcus aureus RF122 3792781 YP_416138.1 CDS norA NC_007622.1 708751 709917 D quinolone resistance protein 708751..709917 Staphylococcus aureus RF122 3793623 YP_416139.1 CDS SAB0645 NC_007622.1 710210 710662 D hypothetical protein 710210..710662 Staphylococcus aureus RF122 3792782 YP_416140.1 CDS SAB0646 NC_007622.1 710836 711318 D transcriptional regulator 710836..711318 Staphylococcus aureus RF122 3792783 YP_416141.1 CDS SAB0647 NC_007622.1 711571 712332 D transcriptional repressor of fructose operon 711571..712332 Staphylococcus aureus RF122 3793074 YP_416142.1 CDS SAB0648 NC_007622.1 712329 713249 D fructose 1-phosphate kinase 712329..713249 Staphylococcus aureus RF122 3793075 YP_416143.1 CDS fruA NC_007622.1 713255 715219 D fructose specific permease 713255..715219 Staphylococcus aureus RF122 3794342 YP_416144.1 CDS SAB0650 NC_007622.1 715528 716709 D N-acetylglucosamine-6-phosphate deacetylase 715528..716709 Staphylococcus aureus RF122 3793076 YP_416145.1 CDS SAB0651 NC_007622.1 716930 718279 D magnesium and cobalt efflux protein 716930..718279 Staphylococcus aureus RF122 3793077 YP_416146.1 CDS SAB0652 NC_007622.1 718501 719340 D oxidoreductase 718501..719340 Staphylococcus aureus RF122 3793078 YP_416147.1 CDS SAB0653 NC_007622.1 719472 720455 D bactoprenol glucosyl transferase or stress response regulator 719472..720455 Staphylococcus aureus RF122 3793079 YP_416148.1 CDS saeS NC_007622.1 720527 721582 R histidine protein kinase complement(720527..721582) Staphylococcus aureus RF122 3793172 YP_416149.1 CDS saeR NC_007622.1 721582 722268 R response regulator complement(721582..722268) Staphylococcus aureus RF122 3793171 YP_416150.1 CDS SAB0656c NC_007622.1 722243 722716 R hypothetical protein complement(722243..722716) Staphylococcus aureus RF122 3793080 YP_416151.1 CDS SAB0657c NC_007622.1 723058 723498 R hypothetical protein complement(723058..723498) Staphylococcus aureus RF122 3793081 YP_416152.1 CDS SAB0658c NC_007622.1 723778 724362 R hypothetical protein complement(723778..724362) Staphylococcus aureus RF122 3793082 YP_416153.1 CDS SAB0659c NC_007622.1 724461 725174 R coenzyme PQQ synthesis-like protein complement(724461..725174) Staphylococcus aureus RF122 3793083 YP_416154.1 CDS SAB0660c NC_007622.1 725178 725597 R 6-pyruvoyl tetrahydrobiopterin synthase complement(725178..725597) Staphylococcus aureus RF122 3793084 YP_416155.1 CDS SAB0661c NC_007622.1 725599 726267 R aluminum resistance protein complement(725599..726267) Staphylococcus aureus RF122 3793085 YP_416156.1 CDS SAB0662 NC_007622.1 726618 727211 D anthranilate/para-aminobenzoate synthase component II 726618..727211 Staphylococcus aureus RF122 3793086 YP_416157.1 CDS SAB0663 NC_007622.1 727186 728346 D anthranilate/para-aminobenzoate synthase component I 727186..728346 Staphylococcus aureus RF122 3793087 YP_416158.1 CDS SAB0664 NC_007622.1 728346 728954 D anthranilate/para-aminobenzoate synthase component I 728346..728954 Staphylococcus aureus RF122 3793088 YP_416159.1 CDS SAB0665 NC_007622.1 729020 729226 D hypothetical protein 729020..729226 Staphylococcus aureus RF122 3793089 YP_416160.1 CDS SAB0666 NC_007622.1 729314 730024 D hypothetical protein 729314..730024 Staphylococcus aureus RF122 3793090 YP_416161.1 CDS SAB0667 NC_007622.1 730008 731012 D hypothetical protein 730008..731012 Staphylococcus aureus RF122 3793091 YP_416162.1 CDS SAB0668 NC_007622.1 731486 733426 D transmembrane sulfatase 731486..733426 Staphylococcus aureus RF122 3793092 YP_416163.1 CDS SAB0669 NC_007622.1 733697 735580 D ATP-binding ABC transporter protein 733697..735580 Staphylococcus aureus RF122 3793093 YP_416164.1 CDS SAB0670 NC_007622.1 735592 737373 D ATP-dependent DNA helicase 735592..737373 Staphylococcus aureus RF122 3792958 YP_416165.1 CDS SAB0671 NC_007622.1 737595 738572 D glycine betaine/carnitine/choline ATP-binding ABC transport protein 737595..738572 Staphylococcus aureus RF122 3792959 YP_416166.1 CDS SAB0672 NC_007622.1 738565 740079 D glycine betaine/carnitine/choline ATP-binding ABC transport protein 738565..740079 Staphylococcus aureus RF122 3792960 YP_416167.1 CDS SAB0673 NC_007622.1 740318 741376 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 740318..741376 Staphylococcus aureus RF122 3792961 YP_416168.1 CDS SAB0674 NC_007622.1 741534 742076 D hypothetical protein 741534..742076 Staphylococcus aureus RF122 3792962 YP_416169.1 CDS SAB0675c NC_007622.1 742682 743599 R multidrug resistance protein complement(742682..743599) Staphylococcus aureus RF122 3792963 YP_416170.1 CDS SAB0676c NC_007622.1 743881 745386 R peptide ABC transporter complement(743881..745386) Staphylococcus aureus RF122 3792964 YP_416171.1 CDS SAB0677c NC_007622.1 745469 745696 R hypothetical protein complement(745469..745696) Staphylococcus aureus RF122 3792965 YP_416172.1 CDS SAB0678c NC_007622.1 745726 746226 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(745726..746226) Staphylococcus aureus RF122 3792966 YP_416173.1 CDS SAB0679c NC_007622.1 746246 747112 R hypothetical protein complement(746246..747112) Staphylococcus aureus RF122 3792967 YP_416174.1 CDS SAB0680 NC_007622.1 747497 747763 D hypothetical protein 747497..747763 Staphylococcus aureus RF122 3792968 YP_416175.1 CDS nrdI NC_007622.1 747913 748311 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 747913..748311 Staphylococcus aureus RF122 3792969 YP_416176.1 CDS rir1 NC_007622.1 748283 750379 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 748283..750379 Staphylococcus aureus RF122 3793099 YP_416177.1 CDS nrdF NC_007622.1 750497 751468 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 750497..751468 Staphylococcus aureus RF122 3793100 YP_416178.1 CDS SAB0684 NC_007622.1 751533 751733 D hypothetical protein 751533..751733 Staphylococcus aureus RF122 3792970 YP_416179.1 CDS sstA NC_007622.1 752103 753074 D FecCD family ferrichrome transporter permease 752103..753074 Staphylococcus aureus RF122 3793311 YP_416180.1 CDS sstB NC_007622.1 753086 754018 D FecCD family ferrichrome ATP-binding ABC transporter 753086..754018 Staphylococcus aureus RF122 3793312 YP_416181.1 CDS sstD NC_007622.1 754893 755894 D ferrichrome ABC transporter lipoprotein 754893..755894 Staphylococcus aureus RF122 3793314 YP_416182.1 CDS SAB0689c NC_007622.1 756155 756469 R hypothetical protein complement(756155..756469) Staphylococcus aureus RF122 3792971 YP_416183.1 CDS murB NC_007622.1 756487 757410 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(756487..757410) Staphylococcus aureus RF122 3792972 YP_416184.1 CDS SAB0691c NC_007622.1 757537 758055 R hypothetical protein complement(757537..758055) Staphylococcus aureus RF122 3792973 YP_416185.1 CDS SAB0692 NC_007622.1 758151 759041 D hypothetical protein 758151..759041 Staphylococcus aureus RF122 3792974 YP_416186.1 CDS SAB0693 NC_007622.1 759206 759526 D hypothetical protein 759206..759526 Staphylococcus aureus RF122 3792975 YP_416187.1 CDS SAB0694 NC_007622.1 759949 761073 D glycerate kinase 759949..761073 Staphylococcus aureus RF122 3792976 YP_416188.1 CDS pepT NC_007622.1 761262 762488 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(761262..762488) Staphylococcus aureus RF122 3794463 YP_416189.1 CDS SAB0696c NC_007622.1 762502 762996 R hypothetical protein complement(762502..762996) Staphylococcus aureus RF122 3793907 YP_416190.1 CDS SAB0697c NC_007622.1 763014 763775 R hypothetical protein complement(763014..763775) Staphylococcus aureus RF122 3793908 YP_416191.1 CDS SAB0698c NC_007622.1 763971 765041 R hypothetical protein complement(763971..765041) Staphylococcus aureus RF122 3793909 YP_416192.1 CDS SAB0699 NC_007622.1 765359 766414 D lipophilic regulator protein 765359..766414 Staphylococcus aureus RF122 3793910 YP_416193.1 CDS SAB0700c NC_007622.1 766586 767227 R hypothetical protein complement(766586..767227) Staphylococcus aureus RF122 3793911 YP_416194.1 CDS SAB0701 NC_007622.1 767371 768237 D hypothetical protein 767371..768237 Staphylococcus aureus RF122 3793912 YP_416195.1 CDS comFA NC_007622.1 768601 769680 D late competence operon protein FA 768601..769680 Staphylococcus aureus RF122 3794841 YP_416196.1 CDS comFC NC_007622.1 769670 770347 D hypothetical protein 769670..770347 Staphylococcus aureus RF122 3794842 YP_416197.1 CDS SAB0704 NC_007622.1 770408 770980 D hypothetical protein 770408..770980 Staphylococcus aureus RF122 3793913 YP_416198.1 CDS secA NC_007622.1 771394 773925 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 771394..773925 Staphylococcus aureus RF122 3793187 YP_416199.1 CDS prfB NC_007622.1 774358 775350 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 774358..775350 Staphylococcus aureus RF122 3794031 YP_416200.1 CDS SAB0707 NC_007622.1 775800 776813 D similar to S. epidermidis transposase sequence; transposase 775800..776813 Staphylococcus aureus RF122 3793914 YP_416201.1 CDS SAB0708 NC_007622.1 777675 778475 D hypothetical protein 777675..778475 Staphylococcus aureus RF122 3793915 YP_416202.1 CDS SAB0709 NC_007622.1 778631 779299 D hypothetical protein 778631..779299 Staphylococcus aureus RF122 3793916 YP_416203.1 CDS SAB0710 NC_007622.1 779296 779532 D hypothetical protein 779296..779532 Staphylococcus aureus RF122 3793917 YP_416204.1 CDS uvrB NC_007622.1 779795 781786 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 779795..781786 Staphylococcus aureus RF122 3794170 YP_416205.1 CDS uvrA NC_007622.1 781794 784640 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 781794..784640 Staphylococcus aureus RF122 3794169 YP_416206.1 CDS hprK NC_007622.1 785133 786065 D catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 785133..786065 Staphylococcus aureus RF122 3794086 YP_416207.1 CDS lgt NC_007622.1 786071 786910 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 786071..786910 Staphylococcus aureus RF122 3794809 YP_416208.1 CDS SAB0715 NC_007622.1 786918 787403 D acetyltransferase 786918..787403 Staphylococcus aureus RF122 3793918 YP_416209.1 CDS SAB0716 NC_007622.1 787411 788850 D hypothetical protein 787411..788850 Staphylococcus aureus RF122 3793919 YP_416210.1 CDS trxB NC_007622.1 788917 789852 D thioredoxin reductase 788917..789852 Staphylococcus aureus RF122 3795129 YP_416211.1 CDS SAB0718c NC_007622.1 790024 790410 R hypothetical protein complement(790024..790410) Staphylococcus aureus RF122 3793920 YP_416212.1 CDS SAB0719 NC_007622.1 790617 791528 D hypothetical protein 790617..791528 Staphylococcus aureus RF122 3793921 YP_416213.1 CDS SAB0720 NC_007622.1 791525 792520 D hypothetical protein 791525..792520 Staphylococcus aureus RF122 3793922 YP_416214.1 CDS SAB0721 NC_007622.1 792631 793575 D hypothetical protein 792631..793575 Staphylococcus aureus RF122 3793923 YP_416215.1 CDS clpP NC_007622.1 794138 794725 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 794138..794725 Staphylococcus aureus RF122 3794835 YP_416216.1 CDS SAB0723 NC_007622.1 794908 796542 D malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 794908..796542 Staphylococcus aureus RF122 3793924 YP_416217.1 CDS SAB0724c NC_007622.1 796749 797651 R hypothetical protein complement(796749..797651) Staphylococcus aureus RF122 3793925 YP_416218.1 CDS SAB0725 NC_007622.1 797835 797993 D hypothetical protein 797835..797993 Staphylococcus aureus RF122 3793926 YP_416219.1 CDS SAB0726 NC_007622.1 798354 798983 D hypothetical protein 798354..798983 Staphylococcus aureus RF122 3793796 YP_416220.1 CDS gapR NC_007622.1 799532 800545 D glycolytic operon regulator 799532..800545 Staphylococcus aureus RF122 3794351 YP_416221.1 CDS gap NC_007622.1 800598 801608 D glyceraldehyde-3-phosphate dehydrogenase 800598..801608 Staphylococcus aureus RF122 3794349 YP_416222.1 CDS pgk NC_007622.1 801747 802937 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 801747..802937 Staphylococcus aureus RF122 3794466 YP_416223.1 CDS tpiA NC_007622.1 803059 803820 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 803059..803820 Staphylococcus aureus RF122 3794333 YP_416224.1 CDS pgm NC_007622.1 803823 805340 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 803823..805340 Staphylococcus aureus RF122 3794467 YP_416225.1 CDS eno NC_007622.1 805470 806774 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 805470..806774 Staphylococcus aureus RF122 3793356 YP_416226.1 CDS SAB0733 NC_007622.1 807114 807572 D hypothetical protein 807114..807572 Staphylococcus aureus RF122 3793797 YP_416227.1 CDS secG NC_007622.1 807639 807872 D preprotein translocase subunit SecG 807639..807872 Staphylococcus aureus RF122 3793798 YP_416228.1 CDS SAB0735 NC_007622.1 808001 808741 D carboxylesterase precursor 808001..808741 Staphylococcus aureus RF122 3793799 YP_416229.1 CDS rnr NC_007622.1 808775 811147 D ribonuclease R 808775..811147 Staphylococcus aureus RF122 3793103 YP_416230.1 CDS smpB NC_007622.1 811169 811633 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 811169..811633 Staphylococcus aureus RF122 3793000 YP_416231.1 CDS SAB0738 NC_007622.1 812335 812604 D transposase 812335..812604 Staphylococcus aureus RF122 3793800 YP_416232.1 CDS SAB0739 NC_007622.1 812840 813385 D hypothetical protein 812840..813385 Staphylococcus aureus RF122 3793801 YP_416233.1 CDS SAB0740 NC_007622.1 813995 814930 D hypothetical protein 813995..814930 Staphylococcus aureus RF122 3793802 YP_416234.1 CDS SAB0741c NC_007622.1 815114 815830 R hypothetical protein complement(815114..815830) Staphylococcus aureus RF122 3793803 YP_416235.1 CDS SAB0742 NC_007622.1 816441 816962 D hypothetical protein 816441..816962 Staphylococcus aureus RF122 3793804 YP_416236.1 CDS SAB0743 NC_007622.1 817101 817631 D hypothetical protein 817101..817631 Staphylococcus aureus RF122 3793805 YP_416237.1 CDS clfA NC_007622.1 817944 820631 D truncated clumping factor 817944..820631 Staphylococcus aureus RF122 3794830 YP_416238.1 CDS SAB0745 NC_007622.1 820852 822351 D secreted von Willebrand factor-binding protein precursor 820852..822351 Staphylococcus aureus RF122 3793806 YP_416239.1 CDS SAB0746 NC_007622.1 822702 823721 D extracellular matrix and plasma binding protein precursor 822702..823721 Staphylococcus aureus RF122 3793807 YP_416240.1 CDS SAB0747 NC_007622.1 824056 824565 D hypothetical protein 824056..824565 Staphylococcus aureus RF122 3793808 YP_416241.1 CDS nuc NC_007622.1 824906 825592 D thermonuclease precursor 824906..825592 Staphylococcus aureus RF122 3793626 YP_416242.1 CDS cspC NC_007622.1 825949 826149 D cold-shock protein C 825949..826149 Staphylococcus aureus RF122 3795277 YP_416243.1 CDS SAB0750c NC_007622.1 826644 826862 R hypothetical protein complement(826644..826862) Staphylococcus aureus RF122 3793809 YP_416244.1 CDS SAB0751c NC_007622.1 826924 827208 R hypothetical protein complement(826924..827208) Staphylococcus aureus RF122 3793810 YP_416245.1 CDS SAB0752c NC_007622.1 827296 827865 R hypothetical protein complement(827296..827865) Staphylococcus aureus RF122 3793811 YP_416246.1 CDS SAB0753c NC_007622.1 828053 828241 R hypothetical protein complement(828053..828241) Staphylococcus aureus RF122 3793812 YP_416247.1 CDS SAB0754c NC_007622.1 828270 828539 R hypothetical protein complement(828270..828539) Staphylococcus aureus RF122 3793813 YP_416248.1 CDS SAB0755c NC_007622.1 829071 829313 R hypothetical protein complement(829071..829313) Staphylococcus aureus RF122 3793814 YP_416249.1 CDS SAB0756 NC_007622.1 829532 830113 D phosphoglycerate mutase 829532..830113 Staphylococcus aureus RF122 3793544 YP_416250.1 CDS SAB0757c NC_007622.1 830186 830803 R lysE type translocator protein complement(830186..830803) Staphylococcus aureus RF122 3793545 YP_416251.1 CDS SAB0758c NC_007622.1 830959 831453 R hypothetical protein complement(830959..831453) Staphylococcus aureus RF122 3793546 YP_416252.1 CDS SAB0759c NC_007622.1 831851 832273 R hypothetical protein complement(831851..832273) Staphylococcus aureus RF122 3793547 YP_416253.1 CDS SAB0760 NC_007622.1 832421 833137 D catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 832421..833137 Staphylococcus aureus RF122 3793548 YP_416254.1 CDS SAB0761 NC_007622.1 833220 833759 D hypothetical protein 833220..833759 Staphylococcus aureus RF122 3793549 YP_416255.1 CDS SAB0762c NC_007622.1 833908 834228 R thioredoxin complement(833908..834228) Staphylococcus aureus RF122 3793550 YP_416256.1 CDS SAB0763 NC_007622.1 834372 834728 D hypothetical protein 834372..834728 Staphylococcus aureus RF122 3793551 YP_416257.1 CDS gcvH NC_007622.1 834886 835266 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 834886..835266 Staphylococcus aureus RF122 3794356 YP_416258.1 CDS SAB0767 NC_007622.1 837187 837483 D hypothetical protein 837187..837483 Staphylococcus aureus RF122 3793554 YP_416259.1 CDS SAB0768 NC_007622.1 837733 838758 D ATP-binding ABC transporter protein 837733..838758 Staphylococcus aureus RF122 3793555 YP_416260.1 CDS SAB0769 NC_007622.1 838751 839446 D ABC transporter permease 838751..839446 Staphylococcus aureus RF122 3793556 YP_416261.1 CDS SAB0770 NC_007622.1 839464 840285 D substrate-binding ABC transporter protein 839464..840285 Staphylococcus aureus RF122 3793557 YP_416262.1 CDS SAB0771 NC_007622.1 840567 840800 D hypothetical protein 840567..840800 Staphylococcus aureus RF122 3793558 YP_416263.1 CDS SAB0772 NC_007622.1 840934 841128 D sigmaB-regulated; hypothetical protein 840934..841128 Staphylococcus aureus RF122 3793559 YP_416264.1 CDS SAB0773c NC_007622.1 841362 842213 R hypothetical protein complement(841362..842213) Staphylococcus aureus RF122 3793560 YP_416265.1 CDS SAB0774 NC_007622.1 842541 843302 D ATP-binding ABC transporter protein 842541..843302 Staphylococcus aureus RF122 3793561 YP_416266.1 CDS SAB0775 NC_007622.1 843400 844707 D hypothetical protein 843400..844707 Staphylococcus aureus RF122 3793562 YP_416267.1 CDS csdB NC_007622.1 844822 846063 D cysteine desulfurase 844822..846063 Staphylococcus aureus RF122 3794848 YP_416268.1 CDS SAB0777 NC_007622.1 846053 846517 D nitrogen fixation protein 846053..846517 Staphylococcus aureus RF122 3793563 YP_416269.1 CDS SAB0778 NC_007622.1 846668 848065 D hypothetical protein 846668..848065 Staphylococcus aureus RF122 3794145 YP_416270.1 CDS SAB0779c NC_007622.1 848133 848693 R phage-related integrase complement(848133..848693) Staphylococcus aureus RF122 3794146 YP_416271.1 CDS SAB0780 NC_007622.1 849355 849588 D phage-associated holin 849355..849588 Staphylococcus aureus RF122 3794147 YP_416272.1 CDS SAB0781 NC_007622.1 849600 850355 D lytic enzyme 849600..850355 Staphylococcus aureus RF122 3794148 YP_416273.1 CDS SAB0782 NC_007622.1 850702 851628 D leukocidin chain lukM precursor 850702..851628 Staphylococcus aureus RF122 3794149 YP_416274.1 CDS SAB0783 NC_007622.1 851630 852598 D Panton-Valentine leukocidin LukF-PV chain precursor 851630..852598 Staphylococcus aureus RF122 3794150 YP_416275.1 CDS SAB0784c NC_007622.1 853306 853512 R hypothetical protein complement(853306..853512) Staphylococcus aureus RF122 3794151 YP_416276.1 CDS SAB0785c NC_007622.1 853611 853925 R hypothetical protein complement(853611..853925) Staphylococcus aureus RF122 3794152 YP_416277.1 CDS SAB0786 NC_007622.1 854290 855330 D hypothetical protein 854290..855330 Staphylococcus aureus RF122 3794153 YP_416278.1 CDS SAB0788 NC_007622.1 856582 857430 D hypothetical protein 856582..857430 Staphylococcus aureus RF122 3794155 YP_416279.1 CDS SAB0789 NC_007622.1 857443 858270 D hypothetical protein 857443..858270 Staphylococcus aureus RF122 3794156 YP_416280.1 CDS SAB0790 NC_007622.1 858297 859613 D hypothetical protein 858297..859613 Staphylococcus aureus RF122 3794157 YP_416281.1 CDS SAB0791 NC_007622.1 859697 860614 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 859697..860614 Staphylococcus aureus RF122 3794158 YP_416282.1 CDS SAB0792 NC_007622.1 860735 861127 D hypothetical protein 860735..861127 Staphylococcus aureus RF122 3794159 YP_416283.1 CDS SAB0793c NC_007622.1 861206 861472 R hypothetical protein complement(861206..861472) Staphylococcus aureus RF122 3794160 YP_416284.1 CDS SAB0794 NC_007622.1 861570 862004 D hypothetical protein 861570..862004 Staphylococcus aureus RF122 3794161 YP_416285.1 CDS SAB0795 NC_007622.1 862004 862783 D 4-nitrophenylphosphatase 862004..862783 Staphylococcus aureus RF122 3794162 YP_416286.1 CDS SAB0796 NC_007622.1 862816 863775 D glycerate dehydrogenase 862816..863775 Staphylococcus aureus RF122 3794163 YP_416287.1 CDS SAB0797 NC_007622.1 864187 864339 D hypothetical protein 864187..864339 Staphylococcus aureus RF122 3793679 YP_416288.1 CDS dltA NC_007622.1 864355 865812 D transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 864355..865812 Staphylococcus aureus RF122 3794484 YP_416289.1 CDS dltB NC_007622.1 865809 867023 D D-alanine lipoteichoic acid and wall teichoic acid esterification protein 865809..867023 Staphylococcus aureus RF122 3794485 YP_416290.1 CDS dltC NC_007622.1 867041 867277 D D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 867041..867277 Staphylococcus aureus RF122 3794486 YP_416291.1 CDS dltD NC_007622.1 867274 868449 D D-alanine lipoteichoic acid and wall teichoic acid esterification secreted protein 867274..868449 Staphylococcus aureus RF122 3794487 YP_416292.1 CDS SAB0802c NC_007622.1 868712 868954 R hypothetical protein complement(868712..868954) Staphylococcus aureus RF122 3793680 YP_416293.1 CDS SAB0803 NC_007622.1 869055 869378 D hypothetical protein 869055..869378 Staphylococcus aureus RF122 3793681 YP_416294.1 CDS SAB0804c NC_007622.1 869438 870502 R NADH dehydrogenase complement(869438..870502) Staphylococcus aureus RF122 3793682 YP_416295.1 CDS SAB0805 NC_007622.1 870819 871055 D hypothetical protein 870819..871055 Staphylococcus aureus RF122 3793683 YP_416296.1 CDS SAB0806 NC_007622.1 871068 871427 D hypothetical protein 871068..871427 Staphylococcus aureus RF122 3793684 YP_416297.1 CDS SAB0807 NC_007622.1 871881 873089 D NADH dehydrogenase 871881..873089 Staphylococcus aureus RF122 3793685 YP_416298.1 CDS SAB0808 NC_007622.1 873220 874695 D cytosol aminopeptidase 873220..874695 Staphylococcus aureus RF122 3793686 YP_416299.1 CDS SAB0809 NC_007622.1 875106 876422 D transporter protein 875106..876422 Staphylococcus aureus RF122 3793687 YP_416300.1 CDS SAB0810 NC_007622.1 876441 876815 D hypothetical protein 876441..876815 Staphylococcus aureus RF122 3793688 YP_416301.1 CDS SAB0812c NC_007622.1 878382 879536 R hypothetical protein complement(878382..879536) Staphylococcus aureus RF122 3793690 YP_416302.1 CDS mnhG NC_007622.1 879799 880155 R subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G complement(879799..880155) Staphylococcus aureus RF122 3792988 YP_416303.1 CDS mnhF NC_007622.1 880133 880426 R subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F complement(880133..880426) Staphylococcus aureus RF122 3792987 YP_416304.1 CDS mnhE NC_007622.1 880426 880905 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E complement(880426..880905) Staphylococcus aureus RF122 3792986 YP_416305.1 CDS mnhD NC_007622.1 880907 882403 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D complement(880907..882403) Staphylococcus aureus RF122 3792985 YP_416306.1 CDS mnhC NC_007622.1 882396 882737 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C complement(882396..882737) Staphylococcus aureus RF122 3792983 YP_416307.1 CDS mnhC NC_007622.1 882737 883165 R subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit B complement(882737..883165) Staphylococcus aureus RF122 3792984 YP_416308.1 CDS mnhA NC_007622.1 883158 885563 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A complement(883158..885563) Staphylococcus aureus RF122 3792982 YP_416309.1 CDS SAB0820c NC_007622.1 885694 886077 R hypothetical protein complement(885694..886077) Staphylococcus aureus RF122 3793691 YP_416310.1 CDS SAB0821 NC_007622.1 886141 886734 D peptidyl-prolyl cis-trans isomerase 886141..886734 Staphylococcus aureus RF122 3793692 YP_416311.1 CDS SAB0822 NC_007622.1 887150 887527 D hypothetical protein 887150..887527 Staphylococcus aureus RF122 3793693 YP_416312.1 CDS SAB0823 NC_007622.1 887888 889015 D NADH-dependent flavin oxidoreductase 887888..889015 Staphylococcus aureus RF122 3793694 YP_416313.1 CDS rocD NC_007622.1 889323 890513 D ornithine--oxo-acid transaminase 889323..890513 Staphylococcus aureus RF122 3793104 YP_416314.1 CDS SAB0825 NC_007622.1 890622 891866 D NAD-specific glutamate dehydrogenase 890622..891866 Staphylococcus aureus RF122 3793695 YP_416315.1 CDS SAB0826c NC_007622.1 891975 892103 R hypothetical protein complement(891975..892103) Staphylococcus aureus RF122 3793696 YP_416316.1 CDS glpQ NC_007622.1 892203 893132 R glycerophosphoryl diester phosphodiesterase complement(892203..893132) Staphylococcus aureus RF122 3793654 YP_416317.1 CDS argH NC_007622.1 893374 894753 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(893374..894753) Staphylococcus aureus RF122 3794945 YP_416318.1 CDS argG NC_007622.1 894743 895948 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(894743..895948) Staphylococcus aureus RF122 3794944 YP_416319.1 CDS pgi NC_007622.1 896299 897630 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 896299..897630 Staphylococcus aureus RF122 3793697 YP_416320.1 CDS SAB0831 NC_007622.1 898015 898200 D hypothetical protein 898015..898200 Staphylococcus aureus RF122 3793698 YP_416321.1 CDS SAB0832 NC_007622.1 898503 899078 D hypothetical protein 898503..899078 Staphylococcus aureus RF122 3793485 YP_416322.1 CDS spsA NC_007622.1 899083 899607 D type-I signal peptidase 899083..899607 Staphylococcus aureus RF122 3793008 YP_416323.1 CDS spsB NC_007622.1 899623 900198 D type-I signal peptidase 899623..900198 Staphylococcus aureus RF122 3793009 YP_416324.1 CDS SAB0835 NC_007622.1 900358 903834 D ATP-dependent nuclease subunit B 900358..903834 Staphylococcus aureus RF122 3793486 YP_416325.1 CDS SAB0836 NC_007622.1 903835 907488 D ATP-dependent nuclease subunit A 903835..907488 Staphylococcus aureus RF122 3793487 YP_416326.1 CDS SAB0837 NC_007622.1 907654 908556 D fumarylacetoacetate hydrolase family protein 907654..908556 Staphylococcus aureus RF122 3793488 YP_416327.1 CDS SAB0838 NC_007622.1 908882 909271 D hypothetical protein 908882..909271 Staphylococcus aureus RF122 3793489 YP_416328.1 CDS SAB0839c NC_007622.1 909442 910758 R NADPH-dependent; catalyzes the reduction of coenzyme A disulfide; coenzyme A disulfide reductase complement(909442..910758) Staphylococcus aureus RF122 3793490 YP_416329.1 CDS SAB0840c NC_007622.1 910810 911634 R hydrolase complement(910810..911634) Staphylococcus aureus RF122 3793491 YP_416330.1 CDS SAB0841 NC_007622.1 911748 912056 D hypothetical protein 911748..912056 Staphylococcus aureus RF122 3793492 YP_416331.1 CDS clpB NC_007622.1 914712 917321 D ATP-dependent protease protein 914712..917321 Staphylococcus aureus RF122 3794832 YP_416332.1 CDS SAB0844c NC_007622.1 917380 918249 R LysR family regulatory protein complement(917380..918249) Staphylococcus aureus RF122 3793494 YP_416333.1 CDS SAB0845 NC_007622.1 918442 918894 D hypothetical protein 918442..918894 Staphylococcus aureus RF122 3793495 YP_416334.1 CDS SAB0846 NC_007622.1 919205 919639 D hypothetical protein 919205..919639 Staphylococcus aureus RF122 3793496 YP_416335.1 CDS SAB0847 NC_007622.1 919819 920133 D hypothetical protein 919819..920133 Staphylococcus aureus RF122 3793497 YP_416336.1 CDS fabH NC_007622.1 920376 921317 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 920376..921317 Staphylococcus aureus RF122 3793361 YP_416337.1 CDS fabF NC_007622.1 921329 922573 D 3-oxoacyl-ACP synthase II 921329..922573 Staphylococcus aureus RF122 3793359 YP_416338.1 CDS SAB0850c NC_007622.1 922627 923943 R transposase complement(922627..923943) Staphylococcus aureus RF122 3793498 YP_416339.1 CDS SAB0851c NC_007622.1 924142 924513 R hypothetical protein complement(924142..924513) Staphylococcus aureus RF122 3793499 YP_416340.1 CDS oppB NC_007622.1 924756 925682 D peptide ABC transporter permease 924756..925682 Staphylococcus aureus RF122 3793638 YP_416341.1 CDS oppC NC_007622.1 925682 926752 D peptide ABC transporter permease 925682..926752 Staphylococcus aureus RF122 3793639 YP_416342.1 CDS oppD NC_007622.1 926768 927850 D peptide ABC transporter ATP-binding protein 926768..927850 Staphylococcus aureus RF122 3794105 YP_416343.1 CDS oppF NC_007622.1 927840 928781 D peptide ABC transporter ATP-binding protein 927840..928781 Staphylococcus aureus RF122 3794106 YP_416344.1 CDS SAB0856 NC_007622.1 928800 930455 D oligopeptide binding protein 928800..930455 Staphylococcus aureus RF122 3793500 YP_416345.1 CDS SAB0857 NC_007622.1 930624 931559 D peptide ABC transporter permease 930624..931559 Staphylococcus aureus RF122 3793501 YP_416346.1 CDS SAB0858 NC_007622.1 931549 932568 D peptide ABC transporter permease 931549..932568 Staphylococcus aureus RF122 3793502 YP_416347.1 CDS SAB0859 NC_007622.1 932654 933664 D peptide ABC transporter ATP-binding protein 932654..933664 Staphylococcus aureus RF122 3793503 YP_416348.1 CDS appD NC_007622.1 933654 934574 D peptide ABC transporter ATP-binding protein 933654..934574 Staphylococcus aureus RF122 3794900 YP_416349.1 CDS SAB0861 NC_007622.1 934603 935457 D oligopeptide ATP-binding protein 934603..935457 Staphylococcus aureus RF122 3792881 YP_416350.1 CDS trpS NC_007622.1 936344 937333 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(936344..937333) Staphylococcus aureus RF122 3795126 YP_416351.2 CDS spxA NC_007622.1 937628 938023 D the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; Spx family transcriptional regulator 937628..938023 Staphylococcus aureus RF122 3792883 YP_416352.1 CDS SAB0865 NC_007622.1 938394 939113 D enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 938394..939113 Staphylococcus aureus RF122 3792884 YP_416353.1 CDS SAB0866 NC_007622.1 939233 940219 D competence-related protein 939233..940219 Staphylococcus aureus RF122 3792885 YP_416354.1 CDS pepB NC_007622.1 940267 942075 D thimet oligopeptidase 940267..942075 Staphylococcus aureus RF122 3794462 YP_416355.1 CDS SAB0868c NC_007622.1 942535 943320 R hypothetical protein complement(942535..943320) Staphylococcus aureus RF122 3792886 YP_416356.1 CDS SAB0869c NC_007622.1 943364 943729 R hypothetical protein complement(943364..943729) Staphylococcus aureus RF122 3792887 YP_416357.1 CDS SAB0870c NC_007622.1 943833 944426 R hypothetical protein complement(943833..944426) Staphylococcus aureus RF122 3792888 YP_416358.1 CDS SAB0871 NC_007622.1 944612 944959 D hypothetical protein 944612..944959 Staphylococcus aureus RF122 3792889 YP_416359.1 CDS SAB0872 NC_007622.1 944976 945611 D GTP pyrophosphokinase 944976..945611 Staphylococcus aureus RF122 3792890 YP_416360.1 CDS ppnK NC_007622.1 945628 946437 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 945628..946437 Staphylococcus aureus RF122 3792891 YP_416361.1 CDS SAB0874 NC_007622.1 946434 947288 D RNA pseudoridylate synthase 946434..947288 Staphylococcus aureus RF122 3792892 YP_416362.1 CDS SAB0875 NC_007622.1 947309 948694 D magnesium transporter 947309..948694 Staphylococcus aureus RF122 3792893 YP_416363.1 CDS SAB0876 NC_007622.1 948704 950548 D Na+/H+ antiporter 948704..950548 Staphylococcus aureus RF122 3792894 YP_416364.1 CDS fabI NC_007622.1 950826 951596 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 950826..951596 Staphylococcus aureus RF122 3793362 YP_416365.1 CDS SAB0878c NC_007622.1 951790 952875 R hypothetical protein complement(951790..952875) Staphylococcus aureus RF122 3792895 YP_416366.1 CDS SAB0879 NC_007622.1 953217 954785 D sodium/alanine symporter family protein 953217..954785 Staphylococcus aureus RF122 3792896 YP_416367.1 CDS SAB0880 NC_007622.1 954928 955686 D hypothetical protein 954928..955686 Staphylococcus aureus RF122 3792897 YP_416368.1 CDS SAB0881 NC_007622.1 955880 956389 D similar to 2'-5' RNA ligase; hypothetical protein 955880..956389 Staphylococcus aureus RF122 3792898 YP_416369.1 CDS SAB0882c NC_007622.1 956502 957692 R hypothetical protein complement(956502..957692) Staphylococcus aureus RF122 3792899 YP_416370.1 CDS SAB0883c NC_007622.1 957670 958845 R processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids; diacylglycerol glucosyltransferase complement(957670..958845) Staphylococcus aureus RF122 3792900 YP_416371.1 CDS murE NC_007622.1 959278 960762 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase 959278..960762 Staphylococcus aureus RF122 3794130 YP_416372.1 CDS SAB0885 NC_007622.1 960752 961003 D hypothetical protein 960752..961003 Staphylococcus aureus RF122 3794868 YP_416373.1 CDS prfC NC_007622.1 961003 962565 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 961003..962565 Staphylococcus aureus RF122 3794032 YP_416374.1 CDS SAB0887 NC_007622.1 962867 963670 D toxic anion resistance membrane protein 962867..963670 Staphylococcus aureus RF122 3794869 YP_416375.1 CDS SAB0888 NC_007622.1 963904 966213 D serine proteinase 963904..966213 Staphylococcus aureus RF122 3794870 YP_416376.1 CDS SAB0889 NC_007622.1 966230 967588 D Na+ transporting ATP synthase 966230..967588 Staphylococcus aureus RF122 3794871 YP_416377.1 CDS SAB0890 NC_007622.1 967724 969238 D 5' nucleotidase 967724..969238 Staphylococcus aureus RF122 3794872 YP_416378.1 CDS SAB0891c NC_007622.1 969737 970306 R transcription factor complement(969737..970306) Staphylococcus aureus RF122 3794873 YP_416379.1 CDS SAB0892 NC_007622.1 970507 970734 D hypothetical protein 970507..970734 Staphylococcus aureus RF122 3794874 YP_416380.1 CDS SAB0893c NC_007622.1 970815 971801 R lipoate-protein ligase A complement(970815..971801) Staphylococcus aureus RF122 3794875 YP_416381.1 CDS SAB0894 NC_007622.1 972191 972793 D hypothetical protein 972191..972793 Staphylococcus aureus RF122 3794876 YP_416382.1 CDS SAB0896 NC_007622.1 974136 976100 D hypothetical protein 974136..976100 Staphylococcus aureus RF122 3794878 YP_416383.1 CDS SAB0897 NC_007622.1 976103 976426 D hypothetical protein 976103..976426 Staphylococcus aureus RF122 3794879 YP_416384.1 CDS SAB0898 NC_007622.1 976468 977061 D ABC transporter ATP-binding protein 976468..977061 Staphylococcus aureus RF122 3794880 YP_416385.1 CDS SAB0899c NC_007622.1 977149 977439 R hypothetical protein complement(977149..977439) Staphylococcus aureus RF122 3794881 YP_416386.1 CDS SAB0900 NC_007622.1 977772 978059 D hypothetical protein 977772..978059 Staphylococcus aureus RF122 3794882 YP_416387.1 CDS SAB0901 NC_007622.1 978065 979546 D glycosyl transferase 978065..979546 Staphylococcus aureus RF122 3794883 YP_416388.1 CDS SAB0902c NC_007622.1 979690 980364 R transposase complement(979690..980364) Staphylococcus aureus RF122 3794884 YP_416389.1 CDS SAB0903c NC_007622.1 980434 980793 R hypothetical protein complement(980434..980793) Staphylococcus aureus RF122 3794885 YP_416390.1 CDS SAB0904 NC_007622.1 981279 981593 D iron transport protein 981279..981593 Staphylococcus aureus RF122 3794886 YP_416391.1 CDS SAB0905 NC_007622.1 981584 982234 D iron transport protein 981584..982234 Staphylococcus aureus RF122 3794770 YP_416392.1 CDS SAB0906c NC_007622.1 982475 982765 R hypothetical protein complement(982475..982765) Staphylococcus aureus RF122 3794771 YP_416393.1 CDS SAB0907 NC_007622.1 982855 983406 D hypothetical protein 982855..983406 Staphylococcus aureus RF122 3794772 YP_416394.1 CDS SAB0908c NC_007622.1 983457 984395 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(983457..984395) Staphylococcus aureus RF122 3794773 YP_416395.1 CDS SAB0909 NC_007622.1 984577 985938 D menaquinone-specific isochorismate synthase 984577..985938 Staphylococcus aureus RF122 3794774 YP_416396.1 CDS SAB0910 NC_007622.1 985925 987598 D 2-oxoglutarate decarboxylase 985925..987598 Staphylococcus aureus RF122 3794775 YP_416397.1 CDS SAB0911 NC_007622.1 987585 988388 D hydrolase 987585..988388 Staphylococcus aureus RF122 3794776 YP_416398.1 CDS menB NC_007622.1 988381 989202 D catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 988381..989202 Staphylococcus aureus RF122 3792977 YP_416399.1 CDS sspC NC_007622.1 989441 989770 R cysteine protease complement(989441..989770) Staphylococcus aureus RF122 3793310 YP_416400.1 CDS sspB NC_007622.1 989808 990989 R cysteine protease precursor complement(989808..990989) Staphylococcus aureus RF122 3793309 YP_416401.1 CDS sspA NC_007622.1 991071 992045 R glutamyl endopeptidase serine protease complement(991071..992045) Staphylococcus aureus RF122 3793308 YP_416402.1 CDS SAB0916c NC_007622.1 992243 992407 R hypothetical protein complement(992243..992407) Staphylococcus aureus RF122 3794777 YP_416403.1 CDS SAB0917c NC_007622.1 992573 993727 R aromatic amino acid transferase complement(992573..993727) Staphylococcus aureus RF122 3794778 YP_416404.1 CDS atl NC_007622.1 995714 999505 R autolysin complement(995714..999505) Staphylococcus aureus RF122 3794961 YP_416405.1 CDS SAB0920c NC_007622.1 999711 1000145 R acetyltransferase family protein complement(999711..1000145) Staphylococcus aureus RF122 3794780 YP_416406.1 CDS SAB0921c NC_007622.1 1000300 1000770 R hypothetical protein complement(1000300..1000770) Staphylococcus aureus RF122 3794781 YP_416407.1 CDS SAB0922c NC_007622.1 1000818 1002044 R hypothetical protein complement(1000818..1002044) Staphylococcus aureus RF122 3794782 YP_416408.1 CDS fmt NC_007622.1 1002493 1003686 D autolysis and methicillin resistant-related protein 1002493..1003686 Staphylococcus aureus RF122 3794742 YP_416409.1 CDS qoxD NC_007622.1 1004223 1004513 R quinol oxidase polypeptide IV complement(1004223..1004513) Staphylococcus aureus RF122 3794267 YP_416410.1 CDS qoxC NC_007622.1 1004510 1005115 R quinol oxidase polypeptide III complement(1004510..1005115) Staphylococcus aureus RF122 3794266 YP_416411.1 CDS qoxB NC_007622.1 1005105 1007093 R quinol oxidase polypeptide I complement(1005105..1007093) Staphylococcus aureus RF122 3794265 YP_416412.1 CDS qoxA NC_007622.1 1007093 1008193 R quinol oxidase polypeptide II complement(1007093..1008193) Staphylococcus aureus RF122 3794264 YP_416413.1 CDS SAB0928c NC_007622.1 1008766 1009083 R hypothetical protein complement(1008766..1009083) Staphylococcus aureus RF122 3794783 YP_416414.1 CDS SAB0929c NC_007622.1 1009372 1009557 R hypothetical protein complement(1009372..1009557) Staphylococcus aureus RF122 3794784 YP_416415.1 CDS folD NC_007622.1 1009864 1010724 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(1009864..1010724) Staphylococcus aureus RF122 3794749 YP_416416.1 CDS purE NC_007622.1 1010925 1011407 D phosphoribosylaminoimidazole carboxylase catalytic subunit 1010925..1011407 Staphylococcus aureus RF122 3794674 YP_416417.1 CDS purK NC_007622.1 1011394 1012518 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1011394..1012518 Staphylococcus aureus RF122 3794677 YP_416418.1 CDS purC NC_007622.1 1012522 1013226 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1012522..1013226 Staphylococcus aureus RF122 3794045 YP_416419.1 CDS SAB0934 NC_007622.1 1013226 1013489 D hypothetical protein 1013226..1013489 Staphylococcus aureus RF122 3794785 YP_416420.1 CDS purQ NC_007622.1 1013491 1014162 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1013491..1014162 Staphylococcus aureus RF122 3794681 YP_416421.1 CDS purL NC_007622.1 1014155 1016344 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1014155..1016344 Staphylococcus aureus RF122 3794678 YP_416422.1 CDS purF NC_007622.1 1016323 1017807 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1016323..1017807 Staphylococcus aureus RF122 3794675 YP_416423.1 CDS purM NC_007622.1 1017800 1018828 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1017800..1018828 Staphylococcus aureus RF122 3794679 YP_416424.1 CDS purN NC_007622.1 1018831 1019397 D phosphoribosylformylglycinamidine formyltransferase 1018831..1019397 Staphylococcus aureus RF122 3794680 YP_416425.1 CDS purH NC_007622.1 1019412 1020890 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1019412..1020890 Staphylococcus aureus RF122 3794676 YP_416426.1 CDS purD NC_007622.1 1020912 1022159 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1020912..1022159 Staphylococcus aureus RF122 3794673 YP_416427.1 CDS SAB0942c NC_007622.1 1022425 1023231 R membrane transporter complement(1022425..1023231) Staphylococcus aureus RF122 3794786 YP_416428.1 CDS SAB0943c NC_007622.1 1023224 1024624 R cation ATP-binding ABC transporter protein complement(1023224..1024624) Staphylococcus aureus RF122 3794787 YP_416429.1 CDS SAB0944c NC_007622.1 1024639 1025214 R hypothetical protein complement(1024639..1025214) Staphylococcus aureus RF122 3794788 YP_416430.1 CDS SAB0945 NC_007622.1 1026020 1027315 D hypothetical protein 1026020..1027315 Staphylococcus aureus RF122 3794789 YP_416431.1 CDS SAB0946c NC_007622.1 1027336 1027539 R hypothetical protein complement(1027336..1027539) Staphylococcus aureus RF122 3794419 YP_416432.1 CDS SAB0947 NC_007622.1 1027740 1028912 D hypothetical protein 1027740..1028912 Staphylococcus aureus RF122 3794420 YP_416433.1 CDS SAB0948 NC_007622.1 1028966 1029508 D hypothetical protein 1028966..1029508 Staphylococcus aureus RF122 3794421 YP_416434.1 CDS ptsH NC_007622.1 1029662 1029928 D phosphocarrier protein HPr 1029662..1029928 Staphylococcus aureus RF122 3794041 YP_416435.1 CDS ptsI NC_007622.1 1029931 1031649 D phosphoenolpyruvate-protein phosphatase 1029931..1031649 Staphylococcus aureus RF122 3794042 YP_416436.1 CDS SAB0951c NC_007622.1 1031884 1032117 R hypothetical protein complement(1031884..1032117) Staphylococcus aureus RF122 3794422 YP_416437.1 CDS SAB0952 NC_007622.1 1032314 1033675 D cytochrome d ubiquinol oxidase subunit I 1032314..1033675 Staphylococcus aureus RF122 3794423 YP_416438.1 CDS SAB0953 NC_007622.1 1033672 1034691 D cytochrome d ubiquinol oxidase subunit II 1033672..1034691 Staphylococcus aureus RF122 3794424 YP_416439.1 CDS SAB0954 NC_007622.1 1034824 1035486 D potassium uptake protein 1034824..1035486 Staphylococcus aureus RF122 3794425 YP_416440.1 CDS SAB0955c NC_007622.1 1035600 1037297 R hypothetical protein complement(1035600..1037297) Staphylococcus aureus RF122 3794426 YP_416441.1 CDS SAB0956c NC_007622.1 1037297 1037515 R hypothetical protein complement(1037297..1037515) Staphylococcus aureus RF122 3794427 YP_416442.1 CDS def NC_007622.1 1037997 1038548 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(1037997..1038548) Staphylococcus aureus RF122 3794428 YP_416443.1 CDS SAB0958 NC_007622.1 1038913 1039539 D hypothetical protein 1038913..1039539 Staphylococcus aureus RF122 3794429 YP_416444.1 CDS pdhA NC_007622.1 1039710 1040822 D pyruvate dehydrogenase E1 component alpha subunit 1039710..1040822 Staphylococcus aureus RF122 3794458 YP_416445.1 CDS pdhB NC_007622.1 1040826 1041803 D pyruvate dehydrogenase E1 component beta subunit 1040826..1041803 Staphylococcus aureus RF122 3794459 YP_416446.1 CDS pdhC NC_007622.1 1041894 1043186 D branched-chain alpha-keto acid dehydrogenase subunit E2 1041894..1043186 Staphylococcus aureus RF122 3794460 YP_416447.1 CDS pdhD NC_007622.1 1043190 1044596 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1043190..1044596 Staphylococcus aureus RF122 3794461 YP_416448.1 CDS SAB0963 NC_007622.1 1044764 1045039 D hypothetical protein 1044764..1045039 Staphylococcus aureus RF122 3794430 YP_416449.1 CDS SAB0964 NC_007622.1 1045183 1045722 D transcriptional regulator 1045183..1045722 Staphylococcus aureus RF122 3794431 YP_416450.1 CDS SAB0965 NC_007622.1 1045734 1046828 D spermidine/putrescine ATP-binding ABC transporter protein 1045734..1046828 Staphylococcus aureus RF122 3794432 YP_416451.1 CDS SAB0967 NC_007622.1 1047625 1048434 D spermidine/putrescine ABC transporter permease protein 1047625..1048434 Staphylococcus aureus RF122 3794434 YP_416452.1 CDS SAB0968 NC_007622.1 1048434 1049507 D spermidine/putrescine-binding periplasmic protein precursor 1048434..1049507 Staphylococcus aureus RF122 3794435 YP_416453.1 CDS SAB0969 NC_007622.1 1049581 1050594 D hypothetical protein 1049581..1050594 Staphylococcus aureus RF122 3794436 YP_416454.1 CDS SAB0970 NC_007622.1 1050877 1051296 D hypothetical protein 1050877..1051296 Staphylococcus aureus RF122 3794437 YP_416455.1 CDS SAB0971c NC_007622.1 1051378 1052730 R manganese transport protein MntH complement(1051378..1052730) Staphylococcus aureus RF122 3792861 YP_416456.1 CDS SAB0972c NC_007622.1 1052914 1053528 R hypothetical protein complement(1052914..1053528) Staphylococcus aureus RF122 3792862 YP_416457.1 CDS SAB0973 NC_007622.1 1053685 1054512 D inositol-1-monophosphatase 1053685..1054512 Staphylococcus aureus RF122 3792863 YP_416458.1 CDS SAB0974 NC_007622.1 1054959 1056806 D GTP-binding elongation factor protein 1054959..1056806 Staphylococcus aureus RF122 3792864 YP_416459.1 CDS SAB0975c NC_007622.1 1056946 1057113 R hypothetical protein complement(1056946..1057113) Staphylococcus aureus RF122 3792865 YP_416460.1 CDS SAB0976c NC_007622.1 1057115 1057597 R hypothetical protein complement(1057115..1057597) Staphylococcus aureus RF122 3792866 YP_416461.1 CDS SAB0977 NC_007622.1 1057738 1058013 D depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein; hypothetical protein 1057738..1058013 Staphylococcus aureus RF122 3792867 YP_416462.1 CDS SAB0978 NC_007622.1 1058327 1059553 D cell division protein 1058327..1059553 Staphylococcus aureus RF122 3792868 YP_416463.1 CDS SAB0979 NC_007622.1 1060107 1063559 D biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1060107..1063559 Staphylococcus aureus RF122 3792869 YP_416464.1 CDS ctaA NC_007622.1 1063699 1064769 R heme O-oxygenase complement(1063699..1064769) Staphylococcus aureus RF122 3795278 YP_416465.1 CDS ctaB NC_007622.1 1065050 1065961 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1065050..1065961 Staphylococcus aureus RF122 3795279 YP_416466.1 CDS SAB0982 NC_007622.1 1065986 1066447 D hypothetical protein 1065986..1066447 Staphylococcus aureus RF122 3792870 YP_416467.1 CDS SAB0983 NC_007622.1 1066773 1067810 D hypothetical protein 1066773..1067810 Staphylococcus aureus RF122 3792871 YP_416468.1 CDS SAB0984 NC_007622.1 1067826 1068260 D hypothetical protein 1067826..1068260 Staphylococcus aureus RF122 3792872 YP_416469.1 CDS SAB0985c NC_007622.1 1068323 1069249 R hypothetical protein complement(1068323..1069249) Staphylococcus aureus RF122 3792873 YP_416470.1 CDS SAB0986 NC_007622.1 1069489 1069743 D hypothetical protein 1069489..1069743 Staphylococcus aureus RF122 3792874 YP_416471.1 CDS SAB0987c NC_007622.1 1069746 1070135 R hypothetical protein complement(1069746..1070135) Staphylococcus aureus RF122 3792875 YP_416472.1 CDS SAB0988 NC_007622.1 1070205 1070747 D methyltransferase 1070205..1070747 Staphylococcus aureus RF122 3792876 YP_416473.1 CDS coaD NC_007622.1 1070749 1071231 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1070749..1071231 Staphylococcus aureus RF122 3794838 YP_416474.1 CDS SAB0990c NC_007622.1 1071293 1072432 R hypothetical protein complement(1071293..1072432) Staphylococcus aureus RF122 3792877 YP_416475.1 CDS SAB0991 NC_007622.1 1072559 1073116 D hypothetical protein 1072559..1073116 Staphylococcus aureus RF122 3792878 YP_416476.1 CDS rpmF NC_007622.1 1073196 1073369 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1073196..1073369 Staphylococcus aureus RF122 3792921 YP_416477.1 CDS isdA NC_007622.1 1073523 1075412 R iron-regulated cell wall-anchored protein complement(1073523..1075412) Staphylococcus aureus RF122 3795267 YP_416478.1 CDS isdB NC_007622.1 1075615 1076667 R cell surface transferrin-binding protein complement(1075615..1076667) Staphylococcus aureus RF122 3795268 YP_416479.1 CDS isdC NC_007622.1 1076876 1077559 D iron-regulated cell surface protein 1076876..1077559 Staphylococcus aureus RF122 3795269 YP_416480.1 CDS isdD NC_007622.1 1077559 1078635 D hypothetical protein 1077559..1078635 Staphylococcus aureus RF122 3795270 YP_416481.1 CDS isdE NC_007622.1 1078632 1079510 D iron transport lipoprotein 1078632..1079510 Staphylococcus aureus RF122 3795271 YP_416482.1 CDS isdF NC_007622.1 1079520 1080488 D iron transport permease protein 1079520..1080488 Staphylococcus aureus RF122 3795272 YP_416483.1 CDS srtB NC_007622.1 1080550 1081284 D NPQTN specific sortase B 1080550..1081284 Staphylococcus aureus RF122 3793013 YP_416484.1 CDS SAB1000 NC_007622.1 1081303 1081626 D iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; heme-degrading monooxygenase IsdG 1081303..1081626 Staphylococcus aureus RF122 3792879 YP_416485.1 CDS SAB1001 NC_007622.1 1082010 1082750 D rRNA methyltransferase 1082010..1082750 Staphylococcus aureus RF122 3792880 YP_416486.1 CDS pheS NC_007622.1 1083131 1084189 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1083131..1084189 Staphylococcus aureus RF122 3794469 YP_416487.1 CDS pheT NC_007622.1 1084189 1086591 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1084189..1086591 Staphylococcus aureus RF122 3794470 YP_416488.2 CDS SAB1004c NC_007622.1 1086900 1087838 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII complement(1086900..1087838) Staphylococcus aureus RF122 3793132 YP_416489.1 CDS SAB1005 NC_007622.1 1088213 1088479 D hypothetical protein 1088213..1088479 Staphylococcus aureus RF122 3793133 YP_416490.1 CDS SAB1006 NC_007622.1 1088480 1089001 D hypothetical protein 1088480..1089001 Staphylococcus aureus RF122 3793134 YP_416491.1 CDS SAB1007 NC_007622.1 1089074 1090786 D hypothetical protein 1089074..1090786 Staphylococcus aureus RF122 3793135 YP_416492.1 CDS SAB1008 NC_007622.1 1090796 1093144 D MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1090796..1093144 Staphylococcus aureus RF122 3793136 YP_416493.1 CDS trxA NC_007622.1 1093317 1093631 D thioredoxin 1093317..1093631 Staphylococcus aureus RF122 3795128 YP_416494.1 CDS uvrC NC_007622.1 1093955 1095736 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1093955..1095736 Staphylococcus aureus RF122 3794171 YP_416495.1 CDS sdhC NC_007622.1 1096060 1096674 D succinate dehydrogenase cytochrome b-558 1096060..1096674 Staphylococcus aureus RF122 3793183 YP_416496.1 CDS sdhA NC_007622.1 1096726 1098492 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1096726..1098492 Staphylococcus aureus RF122 3793181 YP_416497.1 CDS sdhB NC_007622.1 1098492 1099307 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1098492..1099307 Staphylococcus aureus RF122 3793182 YP_416498.1 CDS murI NC_007622.1 1099548 1100348 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1099548..1100348 Staphylococcus aureus RF122 3794132 YP_416499.1 CDS SAB1015 NC_007622.1 1100360 1100947 D hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 1100360..1100947 Staphylococcus aureus RF122 3793137 YP_416500.1 CDS SAB1016 NC_007622.1 1100940 1101443 D hypothetical protein 1100940..1101443 Staphylococcus aureus RF122 3793138 YP_416501.1 CDS SAB1017 NC_007622.1 1101572 1101739 D hypothetical protein 1101572..1101739 Staphylococcus aureus RF122 3793139 YP_416502.1 CDS SAB1018 NC_007622.1 1101933 1102262 D hypothetical protein 1101933..1102262 Staphylococcus aureus RF122 3793140 YP_416503.1 CDS SAB1019c NC_007622.1 1102631 1103032 R FLIPr; secreted protein that blocks the formyl peptide receptor-like 1 (FPRL1) found in neutrophils, monocytes, B cells, and NK cells; inhibits the binding of chemoattractants (such as formylated peptides) to FPRL1, which initiates the phagocyte mobilization towards the infection site; formyl peptide receptor-like 1 inhibitory protein complement(1102631..1103032) Staphylococcus aureus RF122 3793141 YP_416504.1 CDS SAB1020 NC_007622.1 1103705 1104211 D hypothetical protein 1103705..1104211 Staphylococcus aureus RF122 3793142 YP_416505.1 CDS fib NC_007622.1 1104470 1104967 D fibrinogen-binding protein 1104470..1104967 Staphylococcus aureus RF122 3794739 YP_416506.1 CDS SAB1022 NC_007622.1 1105122 1105472 D fibrinogen-binding protein precursor 1105122..1105472 Staphylococcus aureus RF122 3793143 YP_416507.1 CDS SAB1023c NC_007622.1 1105724 1105918 R hypothetical protein complement(1105724..1105918) Staphylococcus aureus RF122 3793144 YP_416508.1 CDS SAB1024c NC_007622.1 1106075 1106260 R hypothetical protein complement(1106075..1106260) Staphylococcus aureus RF122 3793145 YP_416509.1 CDS SAB1025c NC_007622.1 1106470 1106718 R hypothetical protein complement(1106470..1106718) Staphylococcus aureus RF122 3793146 YP_416510.1 CDS SAB1026c NC_007622.1 1106882 1107115 R hypothetical protein complement(1106882..1107115) Staphylococcus aureus RF122 3793147 YP_416511.1 CDS hla NC_007622.1 1107592 1108551 R alpha-hemolysin precursor complement(1107592..1108551) Staphylococcus aureus RF122 3794921 YP_416512.1 CDS SAB1028 NC_007622.1 1109224 1109370 D hypothetical protein 1109224..1109370 Staphylococcus aureus RF122 3793148 YP_416513.1 CDS SAB1029 NC_007622.1 1109354 1109551 D hypothetical protein 1109354..1109551 Staphylococcus aureus RF122 3793149 YP_416514.1 CDS SAB1030c NC_007622.1 1109995 1110711 R these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein complement(1109995..1110711) Staphylococcus aureus RF122 3793150 YP_416515.1 CDS SAB1031c NC_007622.1 1110819 1111544 R these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein complement(1110819..1111544) Staphylococcus aureus RF122 3793659 YP_416516.1 CDS SAB1032c NC_007622.1 1111640 1112365 R these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein complement(1111640..1112365) Staphylococcus aureus RF122 3793660 YP_416517.1 CDS SAB1033 NC_007622.1 1112803 1113804 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1112803..1113804 Staphylococcus aureus RF122 3793661 YP_416518.1 CDS SAB1034 NC_007622.1 1113827 1114759 D catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 1113827..1114759 Staphylococcus aureus RF122 3793662 YP_416519.1 CDS SAB1035 NC_007622.1 1114930 1116486 D hypothetical protein 1114930..1116486 Staphylococcus aureus RF122 3793663 YP_416520.1 CDS SAB1036c NC_007622.1 1116638 1116925 R hypothetical protein complement(1116638..1116925) Staphylococcus aureus RF122 3793664 YP_416521.1 CDS SAB1037c NC_007622.1 1117338 1118285 R exfoliative toxin complement(1117338..1118285) Staphylococcus aureus RF122 3793665 YP_416523.1 CDS SAB1039 NC_007622.1 1120088 1120774 D haloacid dehalgenase-like hydrolase 1120088..1120774 Staphylococcus aureus RF122 3793667 YP_416524.1 CDS SAB1040c NC_007622.1 1120882 1121322 R hypothetical protein complement(1120882..1121322) Staphylococcus aureus RF122 3793668 YP_416525.1 CDS SAB1041 NC_007622.1 1121517 1123130 D hypothetical protein 1121517..1123130 Staphylococcus aureus RF122 3793669 YP_416526.1 CDS SAB1042 NC_007622.1 1123275 1123706 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1123275..1123706 Staphylococcus aureus RF122 3793670 YP_416527.1 CDS mraW NC_007622.1 1123722 1124657 D S-adenosyl-methyltransferase MraW 1123722..1124657 Staphylococcus aureus RF122 3793671 YP_416528.1 CDS SAB1044 NC_007622.1 1124641 1125072 D cell division protein 1124641..1125072 Staphylococcus aureus RF122 3793672 YP_416529.1 CDS pbpA NC_007622.1 1125053 1127287 D penicillin-binding protein 1 1125053..1127287 Staphylococcus aureus RF122 3794119 YP_416530.1 CDS mraY NC_007622.1 1127579 1128544 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1127579..1128544 Staphylococcus aureus RF122 3793457 YP_416531.1 CDS murD NC_007622.1 1128546 1129895 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1128546..1129895 Staphylococcus aureus RF122 3794129 YP_416532.1 CDS SAB1048 NC_007622.1 1129911 1131230 D cell division protein 1129911..1131230 Staphylococcus aureus RF122 3793673 YP_416533.1 CDS ftsA NC_007622.1 1131335 1132741 D cell division protein 1131335..1132741 Staphylococcus aureus RF122 3794344 YP_416534.1 CDS ftsZ NC_007622.1 1132774 1133946 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1132774..1133946 Staphylococcus aureus RF122 3794346 YP_416535.1 CDS SAB1051 NC_007622.1 1134207 1134998 D hypothetical protein 1134207..1134998 Staphylococcus aureus RF122 3793674 YP_416536.1 CDS SAB1052 NC_007622.1 1135016 1135690 D hypothetical protein 1135016..1135690 Staphylococcus aureus RF122 3793675 YP_416537.1 CDS SAB1053 NC_007622.1 1135687 1136250 D hypothetical protein 1135687..1136250 Staphylococcus aureus RF122 3793676 YP_416538.1 CDS SAB1054 NC_007622.1 1136262 1136552 D hypothetical protein 1136262..1136552 Staphylococcus aureus RF122 3793677 YP_416539.1 CDS SAB1056 NC_007622.1 1137464 1138081 D hypothetical protein 1137464..1138081 Staphylococcus aureus RF122 3793738 YP_416540.1 CDS ileS NC_007622.1 1138302 1141055 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1138302..1141055 Staphylococcus aureus RF122 3795257 YP_416541.1 CDS SAB1058 NC_007622.1 1141345 1142142 D hypothetical protein 1141345..1142142 Staphylococcus aureus RF122 3793739 YP_416542.1 CDS lspA NC_007622.1 1143377 1143868 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1143377..1143868 Staphylococcus aureus RF122 3794757 YP_416543.1 CDS SAB1061 NC_007622.1 1143868 1144785 D hypothetical protein 1143868..1144785 Staphylococcus aureus RF122 3793741 YP_416544.1 CDS pyrR NC_007622.1 1145186 1145713 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 1145186..1145713 Staphylococcus aureus RF122 3794263 YP_416545.1 CDS pyrP NC_007622.1 1145931 1147238 D uracil permease 1145931..1147238 Staphylococcus aureus RF122 3794262 YP_416546.1 CDS pyrB NC_007622.1 1147266 1148036 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1147266..1148036 Staphylococcus aureus RF122 3794688 YP_416547.1 CDS pyrC NC_007622.1 1148165 1149439 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1148165..1149439 Staphylococcus aureus RF122 3794689 YP_416548.1 CDS pyrAA NC_007622.1 1149441 1150541 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1149441..1150541 Staphylococcus aureus RF122 3794686 YP_416549.1 CDS carB NC_007622.1 1150534 1153707 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1150534..1153707 Staphylococcus aureus RF122 3794687 YP_416550.1 CDS pyrF NC_007622.1 1153817 1154509 D type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1153817..1154509 Staphylococcus aureus RF122 3794691 YP_416551.1 CDS pyrE NC_007622.1 1154509 1155120 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1154509..1155120 Staphylococcus aureus RF122 3794690 YP_416552.1 CDS SAB1070 NC_007622.1 1155150 1155362 D hypothetical protein 1155150..1155362 Staphylococcus aureus RF122 3793742 YP_416553.1 CDS SAB1071 NC_007622.1 1155799 1156200 D hypothetical protein 1155799..1156200 Staphylococcus aureus RF122 3793743 YP_416554.1 CDS SAB1072c NC_007622.1 1156663 1158360 R fibronectin/fibrinogen-binding protein complement(1156663..1158360) Staphylococcus aureus RF122 3793744 YP_416555.1 CDS gmk NC_007622.1 1158635 1159258 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1158635..1159258 Staphylococcus aureus RF122 3794224 YP_416556.1 CDS rpoZ NC_007622.1 1159258 1159476 D Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1159258..1159476 Staphylococcus aureus RF122 3793745 YP_416557.1 CDS SAB1075 NC_007622.1 1159692 1160891 D pantothenate metabolism flavoprotein 1159692..1160891 Staphylococcus aureus RF122 3793746 YP_416558.1 CDS priA NC_007622.1 1160891 1163299 D primosomal protein 1160891..1163299 Staphylococcus aureus RF122 3794033 YP_416559.1 CDS SAB1078c NC_007622.1 1164914 1165192 R hypothetical protein complement(1164914..1165192) Staphylococcus aureus RF122 3793748 YP_416560.1 CDS def NC_007622.1 1165416 1165904 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1165416..1165904 Staphylococcus aureus RF122 3795294 YP_416561.1 CDS fmt NC_007622.1 1165897 1166832 D methionyl-tRNA formyltransferase 1165897..1166832 Staphylococcus aureus RF122 3794743 YP_416562.1 CDS sun NC_007622.1 1166829 1168136 D RNA-binding protein 1166829..1168136 Staphylococcus aureus RF122 3793315 YP_416563.1 CDS SAB1082 NC_007622.1 1168139 1169233 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1168139..1169233 Staphylococcus aureus RF122 3793749 YP_416564.1 CDS SAB1083 NC_007622.1 1169240 1169983 D phosphoprotein phosphatase 1169240..1169983 Staphylococcus aureus RF122 3793750 YP_416565.1 CDS pknB NC_007622.1 1169980 1171974 D protein kinase 1169980..1171974 Staphylococcus aureus RF122 3794474 YP_416566.1 CDS SAB1085 NC_007622.1 1172202 1173077 D hypothetical protein 1172202..1173077 Staphylococcus aureus RF122 3793751 YP_416567.1 CDS SAB1086 NC_007622.1 1173078 1173722 D ribulose-phosphate 3-epimerase 1173078..1173722 Staphylococcus aureus RF122 3793752 YP_416568.1 CDS SAB1087 NC_007622.1 1173729 1174370 D hypothetical protein 1173729..1174370 Staphylococcus aureus RF122 3793753 YP_416569.1 CDS rpmB NC_007622.1 1174752 1174940 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(1174752..1174940) Staphylococcus aureus RF122 3795099 YP_416570.1 CDS SAB1089 NC_007622.1 1175382 1175756 D hypothetical protein 1175382..1175756 Staphylococcus aureus RF122 3793754 YP_416571.1 CDS SAB1090 NC_007622.1 1175771 1177417 D hypothetical protein 1175771..1177417 Staphylococcus aureus RF122 3793755 YP_416572.1 CDS recG NC_007622.1 1177607 1179667 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1177607..1179667 Staphylococcus aureus RF122 3794274 YP_416573.1 CDS SAB1092 NC_007622.1 1179859 1180431 D negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator 1179859..1180431 Staphylococcus aureus RF122 3793756 YP_416574.1 CDS SAB1093 NC_007622.1 1180436 1181422 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1180436..1181422 Staphylococcus aureus RF122 3795062 YP_416575.1 CDS fabD NC_007622.1 1181415 1182341 D malonyl CoA-acyl carrier protein transacylase 1181415..1182341 Staphylococcus aureus RF122 3793358 YP_416576.1 CDS fabG NC_007622.1 1182328 1183068 D 3-oxoacyl-(acyl-carrier protein) reductase 1182328..1183068 Staphylococcus aureus RF122 3793360 YP_416577.1 CDS acpP NC_007622.1 1183276 1183509 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1183276..1183509 Staphylococcus aureus RF122 3794823 YP_416578.1 CDS rnc NC_007622.1 1183625 1184356 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1183625..1184356 Staphylococcus aureus RF122 3795063 YP_416579.1 CDS SAB1098 NC_007622.1 1184503 1188069 D chromosome segregation SMC protein 1184503..1188069 Staphylococcus aureus RF122 3795064 YP_416580.1 CDS SAB1099 NC_007622.1 1188069 1189319 D signal recognition particle protein 1188069..1189319 Staphylococcus aureus RF122 3795065 YP_416581.1 CDS SAB1100 NC_007622.1 1189306 1189638 D DNA-binding protein 1189306..1189638 Staphylococcus aureus RF122 3795066 YP_416582.1 CDS ffh NC_007622.1 1189664 1191031 D signal recognition particle protein 1189664..1191031 Staphylococcus aureus RF122 3794733 YP_416583.1 CDS rpsP NC_007622.1 1191373 1191648 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1191373..1191648 Staphylococcus aureus RF122 3794992 YP_416584.1 CDS rimM NC_007622.1 1191836 1192339 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1191836..1192339 Staphylococcus aureus RF122 3793097 YP_416585.1 CDS trmD NC_007622.1 1192339 1193076 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1192339..1193076 Staphylococcus aureus RF122 3794335 YP_416586.1 CDS rplS NC_007622.1 1193179 1193529 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1193179..1193529 Staphylococcus aureus RF122 3795092 YP_416587.1 CDS rbgA NC_007622.1 1197005 1197889 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1197005..1197889 Staphylococcus aureus RF122 3795068 YP_416588.1 CDS rnhB NC_007622.1 1197873 1198640 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1197873..1198640 Staphylococcus aureus RF122 3795069 YP_416589.1 CDS sucC NC_007622.1 1198749 1199915 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1198749..1199915 Staphylococcus aureus RF122 3795070 YP_416590.1 CDS SAB1110 NC_007622.1 1199937 1200845 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1199937..1200845 Staphylococcus aureus RF122 3795071 YP_416591.1 CDS smf NC_007622.1 1201167 1202039 D DNA processing protein 1201167..1202039 Staphylococcus aureus RF122 3792999 YP_416592.1 CDS topA NC_007622.1 1202213 1204288 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1202213..1204288 Staphylococcus aureus RF122 3794332 YP_416593.1 CDS gid NC_007622.1 1204444 1205751 D TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1204444..1205751 Staphylococcus aureus RF122 3794359 YP_416594.1 CDS SAB1114 NC_007622.1 1206170 1207066 D integrase/recombinase 1206170..1207066 Staphylococcus aureus RF122 3795072 YP_416595.1 CDS hslV NC_007622.1 1207063 1207608 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1207063..1207608 Staphylococcus aureus RF122 3794093 YP_416596.1 CDS hslU NC_007622.1 1207674 1209077 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1207674..1209077 Staphylococcus aureus RF122 3794092 YP_416597.1 CDS codY NC_007622.1 1209102 1209875 D CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1209102..1209875 Staphylococcus aureus RF122 3794840 YP_416598.1 CDS rpsB NC_007622.1 1210217 1210984 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1210217..1210984 Staphylococcus aureus RF122 3792933 YP_416599.1 CDS tsf NC_007622.1 1211166 1212047 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1211166..1212047 Staphylococcus aureus RF122 3793327 YP_416600.1 CDS pyrH NC_007622.1 1212184 1212906 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1212184..1212906 Staphylococcus aureus RF122 3792998 YP_416601.1 CDS frr NC_007622.1 1212925 1213479 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1212925..1213479 Staphylococcus aureus RF122 3794341 YP_416602.1 CDS uppS NC_007622.1 1213852 1214622 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 1213852..1214622 Staphylococcus aureus RF122 3795137 YP_416603.1 CDS cdsA NC_007622.1 1214629 1215411 D phosphatidate cytidylyltransferase 1214629..1215411 Staphylococcus aureus RF122 3794413 YP_416604.1 CDS SAB1124 NC_007622.1 1215623 1216909 D zinc metalloprotease 1215623..1216909 Staphylococcus aureus RF122 3795073 YP_416605.1 CDS proS NC_007622.1 1216929 1218632 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1216929..1218632 Staphylococcus aureus RF122 3794037 YP_416606.1 CDS polC NC_007622.1 1218890 1223206 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1218890..1223206 Staphylococcus aureus RF122 3794028 YP_416607.1 CDS SAB1127 NC_007622.1 1223496 1223963 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1223496..1223963 Staphylococcus aureus RF122 3795074 YP_416608.1 CDS nusA NC_007622.1 1223984 1225159 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1223984..1225159 Staphylococcus aureus RF122 3793629 YP_416609.1 CDS SAB1129 NC_007622.1 1225180 1225464 D hypothetical protein 1225180..1225464 Staphylococcus aureus RF122 3795075 YP_416610.1 CDS SAB1130 NC_007622.1 1225461 1225778 D ribosomal protein 1225461..1225778 Staphylococcus aureus RF122 3795076 YP_416611.1 CDS infB NC_007622.1 1225783 1227900 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1225783..1227900 Staphylococcus aureus RF122 3795263 YP_416612.1 CDS rbfA NC_007622.1 1228287 1228637 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1228287..1228637 Staphylococcus aureus RF122 3794271 YP_416613.1 CDS truB NC_007622.1 1228807 1229724 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1228807..1229724 Staphylococcus aureus RF122 3795127 YP_416614.1 CDS ribC NC_007622.1 1229739 1230710 D bifunctional protein including riboflavin kinase and FAD synthase 1229739..1230710 Staphylococcus aureus RF122 3794280 YP_416615.1 CDS rpsO NC_007622.1 1230825 1231094 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1230825..1231094 Staphylococcus aureus RF122 3794991 YP_416616.1 CDS pnpA NC_007622.1 1231463 1233559 D polynucleotide phosphorylase/polyadenylase 1231463..1233559 Staphylococcus aureus RF122 3794026 YP_416617.1 CDS SAB1137 NC_007622.1 1233871 1235469 D metallo-beta-lactamase superfamily protein 1233871..1235469 Staphylococcus aureus RF122 3795077 YP_416618.1 CDS SAB1138 NC_007622.1 1235726 1238095 D SpoIII family DNA translocase 1235726..1238095 Staphylococcus aureus RF122 3795078 YP_416619.1 CDS SAB1139 NC_007622.1 1238100 1238813 D GntR family transcriptional regulator 1238100..1238813 Staphylococcus aureus RF122 3795079 YP_416620.1 CDS SAB1140 NC_007622.1 1238844 1240109 D hypothetical protein 1238844..1240109 Staphylococcus aureus RF122 3795080 YP_416621.1 CDS SAB1141 NC_007622.1 1240109 1241395 D protease (zinc) protein 1240109..1241395 Staphylococcus aureus RF122 3795081 YP_416622.1 CDS SAB1143 NC_007622.1 1242205 1243032 D hypothetical protein 1242205..1243032 Staphylococcus aureus RF122 3794067 YP_416623.1 CDS SAB1144 NC_007622.1 1243051 1243443 D DNA-binding protein 1243051..1243443 Staphylococcus aureus RF122 3794068 YP_416624.1 CDS pgsA NC_007622.1 1243477 1244055 D phosphatidylglycerophosphate synthase 1243477..1244055 Staphylococcus aureus RF122 3794468 YP_416625.1 CDS cinA NC_007622.1 1244528 1245679 D competence-damage inducible protein 1244528..1245679 Staphylococcus aureus RF122 3794414 YP_416626.1 CDS recA NC_007622.1 1245844 1246887 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1245844..1246887 Staphylococcus aureus RF122 3794272 YP_416627.1 CDS SAB1148 NC_007622.1 1247241 1248800 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1247241..1248800 Staphylococcus aureus RF122 3794069 YP_416628.1 CDS SAB1149c NC_007622.1 1249097 1249312 R hypothetical protein complement(1249097..1249312) Staphylococcus aureus RF122 3794070 YP_416629.1 CDS SAB1150 NC_007622.1 1249486 1250283 D hypothetical protein 1249486..1250283 Staphylococcus aureus RF122 3794071 YP_416630.1 CDS SAB1151 NC_007622.1 1250393 1252183 D pyruvate ferredoxin oxidoreductase alpha chain 1250393..1252183 Staphylococcus aureus RF122 3794072 YP_416631.1 CDS SAB1152 NC_007622.1 1252184 1253050 D catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1252184..1253050 Staphylococcus aureus RF122 3794073 YP_416632.1 CDS SAB1153 NC_007622.1 1253144 1253437 D hypothetical protein 1253144..1253437 Staphylococcus aureus RF122 3794074 YP_416633.1 CDS SAB1154 NC_007622.1 1253571 1255115 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1253571..1255115 Staphylococcus aureus RF122 3794075 YP_416634.1 CDS SAB1155 NC_007622.1 1255116 1255481 D hypothetical protein 1255116..1255481 Staphylococcus aureus RF122 3794076 YP_416635.1 CDS SAB1156 NC_007622.1 1255508 1255999 D hypothetical protein 1255508..1255999 Staphylococcus aureus RF122 3794077 YP_416636.1 CDS mutS NC_007622.1 1256302 1258920 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1256302..1258920 Staphylococcus aureus RF122 3794134 YP_416637.1 CDS glpP NC_007622.1 1260956 1261489 D glycerol uptake operon antiterminator regulatory protein 1260956..1261489 Staphylococcus aureus RF122 3793653 YP_416638.1 CDS glpF NC_007622.1 1261964 1262782 D glycerol uptake facilitator 1261964..1262782 Staphylococcus aureus RF122 3793651 YP_416639.1 CDS glpK NC_007622.1 1262912 1264408 D Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 1262912..1264408 Staphylococcus aureus RF122 3793652 YP_416640.1 CDS glpD NC_007622.1 1264518 1266239 D aerobic glycerol-3-phosphate dehydrogenase 1264518..1266239 Staphylococcus aureus RF122 3793650 YP_416641.1 CDS SAB1163 NC_007622.1 1266389 1267303 D lysophospholipase 1266389..1267303 Staphylococcus aureus RF122 3794078 YP_416642.1 CDS miaA NC_007622.1 1267309 1268256 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1267309..1268256 Staphylococcus aureus RF122 3794079 YP_416643.1 CDS SAB1165 NC_007622.1 1268271 1268504 D phage-related host factor-I protein 1268271..1268504 Staphylococcus aureus RF122 3794080 YP_416644.1 CDS SAB1166c NC_007622.1 1268707 1269489 R transposase complement(1268707..1269489) Staphylococcus aureus RF122 3794081 YP_416645.1 CDS SAB1167c NC_007622.1 1269528 1270028 R transposase complement(1269528..1270028) Staphylococcus aureus RF122 3794082 YP_416646.1 CDS SAB1168c NC_007622.1 1270237 1270713 R glutathione peroxidase complement(1270237..1270713) Staphylococcus aureus RF122 3794083 YP_416647.1 CDS SAB1169 NC_007622.1 1270825 1272084 D GTP-binding protein 1270825..1272084 Staphylococcus aureus RF122 3794084 YP_416648.1 CDS SAB1170 NC_007622.1 1272081 1273319 D hypothetical protein 1272081..1273319 Staphylococcus aureus RF122 3794535 YP_416649.1 CDS glnR NC_007622.1 1273563 1273931 D glutamine synthetase repressor 1273563..1273931 Staphylococcus aureus RF122 3793649 YP_416650.1 CDS glnA NC_007622.1 1273950 1275290 D glutamine synthetase 1273950..1275290 Staphylococcus aureus RF122 3793647 YP_416651.1 CDS SAB1173 NC_007622.1 1278611 1278811 D hypothetical protein 1278611..1278811 Staphylococcus aureus RF122 3794536 YP_416652.1 CDS SAB1174 NC_007622.1 1279323 1279739 D hypothetical protein 1279323..1279739 Staphylococcus aureus RF122 3794537 YP_416653.1 CDS SAB1175c NC_007622.1 1279804 1280025 R hypothetical protein complement(1279804..1280025) Staphylococcus aureus RF122 3794538 YP_416654.1 CDS SAB1176 NC_007622.1 1280574 1281908 D hypothetical protein 1280574..1281908 Staphylococcus aureus RF122 3794539 YP_416655.1 CDS SAB1177 NC_007622.1 1282401 1282601 D hypothetical protein 1282401..1282601 Staphylococcus aureus RF122 3794540 YP_416656.1 CDS SAB1178c NC_007622.1 1283647 1284702 R hypothetical protein complement(1283647..1284702) Staphylococcus aureus RF122 3794541 YP_416657.1 CDS SAB1179 NC_007622.1 1284942 1285139 D hypothetical protein 1284942..1285139 Staphylococcus aureus RF122 3794542 YP_416658.1 CDS SAB1180 NC_007622.1 1285196 1286677 D cardiolipin synthase 1285196..1286677 Staphylococcus aureus RF122 3794543 YP_416659.1 CDS SAB1181c NC_007622.1 1287063 1287251 R hypothetical protein complement(1287063..1287251) Staphylococcus aureus RF122 3794544 YP_416660.1 CDS nucI NC_007622.1 1287390 1287923 D thermonuclease 1287390..1287923 Staphylococcus aureus RF122 3793627 YP_416661.1 CDS SAB1183c NC_007622.1 1288064 1288918 R hypothetical protein complement(1288064..1288918) Staphylococcus aureus RF122 3794545 YP_416662.1 CDS SAB1184 NC_007622.1 1289234 1289824 D hypothetical protein 1289234..1289824 Staphylococcus aureus RF122 3794546 YP_416663.1 CDS SAB1185c NC_007622.1 1289878 1291260 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase complement(1289878..1291260) Staphylococcus aureus RF122 3794547 YP_416664.1 CDS SAB1186 NC_007622.1 1291451 1292731 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1291451..1292731 Staphylococcus aureus RF122 3794548 YP_416665.1 CDS thrC NC_007622.1 1292737 1293798 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1292737..1293798 Staphylococcus aureus RF122 3794327 YP_416666.1 CDS thrB NC_007622.1 1293800 1294714 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1293800..1294714 Staphylococcus aureus RF122 3794326 YP_416667.1 CDS SAB1189 NC_007622.1 1294772 1295575 D hypothetical protein 1294772..1295575 Staphylococcus aureus RF122 3794549 YP_416668.1 CDS SAB1190c NC_007622.1 1295904 1296218 R hypothetical protein complement(1295904..1296218) Staphylococcus aureus RF122 3794550 YP_416669.1 CDS SAB1191c NC_007622.1 1296436 1297890 R amino acid permease complement(1296436..1297890) Staphylococcus aureus RF122 3794551 YP_416670.1 CDS SAB1192 NC_007622.1 1298088 1299611 D catalase 1298088..1299611 Staphylococcus aureus RF122 3794552 YP_416671.2 CDS rpmG NC_007622.1 1299702 1299851 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1299702..1299851 Staphylococcus aureus RF122 3792923 YP_416672.1 CDS rpsN NC_007622.1 1300305 1300574 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1300305..1300574 Staphylococcus aureus RF122 3794989 YP_416673.1 CDS SAB1195 NC_007622.1 1300731 1301708 D guanosine 5'-monophosphate oxidoreductase 1300731..1301708 Staphylococcus aureus RF122 3794553 YP_416674.1 CDS dinR NC_007622.1 1303125 1303748 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1303125..1303748) Staphylococcus aureus RF122 3794483 YP_416675.1 CDS SAB1198 NC_007622.1 1303888 1304124 D hypothetical protein 1303888..1304124 Staphylococcus aureus RF122 3793055 YP_416676.1 CDS SAB1199 NC_007622.1 1304261 1304500 D hypothetical protein 1304261..1304500 Staphylococcus aureus RF122 3793056 YP_416677.1 CDS SAB1200 NC_007622.1 1304621 1306609 D transketolase 1304621..1306609 Staphylococcus aureus RF122 3793057 YP_416678.1 CDS SAB1201 NC_007622.1 1306887 1307129 D hypothetical protein 1306887..1307129 Staphylococcus aureus RF122 3793058 YP_416679.1 CDS SAB1202 NC_007622.1 1307308 1307775 D hypothetical protein 1307308..1307775 Staphylococcus aureus RF122 3793059 YP_416680.1 CDS SAB1203 NC_007622.1 1307899 1309020 D exonuclease 1307899..1309020 Staphylococcus aureus RF122 3793060 YP_416681.1 CDS SAB1204 NC_007622.1 1309024 1311996 D exonuclease 1309024..1311996 Staphylococcus aureus RF122 3793061 YP_416682.1 CDS mscL NC_007622.1 1312124 1312486 R forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(1312124..1312486) Staphylococcus aureus RF122 3793460 YP_416683.1 CDS opuD NC_007622.1 1312690 1314336 D glycine betaine transporter 1312690..1314336 Staphylococcus aureus RF122 3794111 YP_416684.1 CDS citB NC_007622.1 1314926 1317631 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1314926..1317631 Staphylococcus aureus RF122 3794415 YP_416685.1 CDS SAB1208 NC_007622.1 1317810 1318277 D hypothetical protein 1317810..1318277 Staphylococcus aureus RF122 3793062 YP_416686.1 CDS SAB1209c NC_007622.1 1318484 1318780 R hypothetical protein complement(1318484..1318780) Staphylococcus aureus RF122 3793063 YP_416687.1 CDS SAB1210c NC_007622.1 1319158 1319766 R hypothetical protein complement(1319158..1319766) Staphylococcus aureus RF122 3793064 YP_416688.1 CDS grlB NC_007622.1 1319966 1321963 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1319966..1321963 Staphylococcus aureus RF122 3794232 YP_416689.1 CDS grlA NC_007622.1 1321963 1324365 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1321963..1324365 Staphylococcus aureus RF122 3794231 YP_416690.1 CDS SAB1213 NC_007622.1 1324615 1326081 D amino acid carrier protein 1324615..1326081 Staphylococcus aureus RF122 3793065 YP_416691.1 CDS SAB1214 NC_007622.1 1326571 1327422 D transcription antiterminator 1326571..1327422 Staphylococcus aureus RF122 3793066 YP_416692.1 CDS SAB1215 NC_007622.1 1327557 1328765 D hypothetical protein 1327557..1328765 Staphylococcus aureus RF122 3793067 YP_416693.1 CDS mprF NC_007622.1 1329247 1331769 D hypothetical protein 1329247..1331769 Staphylococcus aureus RF122 3793454 YP_416694.1 CDS msrA1 NC_007622.1 1331972 1332481 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(1331972..1332481) Staphylococcus aureus RF122 3793462 YP_416695.1 CDS SAB1218 NC_007622.1 1332618 1333601 D peptide methionine sulfoxide reductase regulator 1332618..1333601 Staphylococcus aureus RF122 3793068 YP_416696.1 CDS SAB1219 NC_007622.1 1334022 1335284 D DNA damage repair protein 1334022..1335284 Staphylococcus aureus RF122 3793069 YP_416697.1 CDS SAB1220c NC_007622.1 1335421 1336512 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(1335421..1336512) Staphylococcus aureus RF122 3793070 YP_416698.1 CDS SAB1221 NC_007622.1 1336677 1337708 D peptidase 1336677..1337708 Staphylococcus aureus RF122 3793071 YP_416699.1 CDS trpE NC_007622.1 1338201 1339607 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 1338201..1339607 Staphylococcus aureus RF122 3795123 YP_416700.1 CDS trpG NC_007622.1 1339604 1340170 D anthranilate synthase component II 1339604..1340170 Staphylococcus aureus RF122 3795125 YP_416701.1 CDS trpD NC_007622.1 1340167 1341174 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1340167..1341174 Staphylococcus aureus RF122 3795122 YP_416702.1 CDS trpC NC_007622.1 1341176 1341958 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 1341176..1341958 Staphylococcus aureus RF122 3795121 YP_416703.1 CDS trpF NC_007622.1 1341958 1342590 D catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 1341958..1342590 Staphylococcus aureus RF122 3795124 YP_416704.1 CDS trpB NC_007622.1 1342583 1343797 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1342583..1343797 Staphylococcus aureus RF122 3795061 YP_416705.1 CDS trpA NC_007622.1 1343790 1344518 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1343790..1344518 Staphylococcus aureus RF122 3795060 YP_416706.1 CDS femA NC_007622.1 1344801 1346102 D factor essential for expression of methicillin resistance 1344801..1346102 Staphylococcus aureus RF122 3793366 YP_416707.1 CDS femB NC_007622.1 1346121 1347380 D methicillin resistance factor protein 1346121..1347380 Staphylococcus aureus RF122 3793367 YP_416708.1 CDS SAB1231 NC_007622.1 1347667 1348413 D hypothetical protein 1347667..1348413 Staphylococcus aureus RF122 3793072 YP_416709.1 CDS SAB1232 NC_007622.1 1348653 1349039 D hypothetical protein 1348653..1349039 Staphylococcus aureus RF122 3793073 YP_416710.1 CDS SAB1233c NC_007622.1 1349241 1349714 R hypothetical protein complement(1349241..1349714) Staphylococcus aureus RF122 3793855 YP_416711.1 CDS SAB1234c NC_007622.1 1349838 1350539 R oligopeptide transporter ATPase complement(1349838..1350539) Staphylococcus aureus RF122 3793856 YP_416712.1 CDS SAB1235c NC_007622.1 1350532 1351305 R oligopeptide transporter ATPase complement(1350532..1351305) Staphylococcus aureus RF122 3793857 YP_416713.1 CDS SAB1236c NC_007622.1 1351292 1352122 R oligopeptide membrane permease complement(1351292..1352122) Staphylococcus aureus RF122 3793858 YP_416714.1 CDS SAB1237c NC_007622.1 1352115 1353101 R oligopeptide membrane permease complement(1352115..1353101) Staphylococcus aureus RF122 3793859 YP_416715.1 CDS SAB1238c NC_007622.1 1353231 1353443 R hypothetical protein complement(1353231..1353443) Staphylococcus aureus RF122 3793860 YP_416716.1 CDS SAB1239c NC_007622.1 1353406 1353750 R hypothetical protein complement(1353406..1353750) Staphylococcus aureus RF122 3793861 YP_416717.1 CDS SAB1240 NC_007622.1 1353955 1355769 D oligoendopeptidase F 1353955..1355769 Staphylococcus aureus RF122 3793862 YP_416718.1 CDS SAB1241c NC_007622.1 1355911 1356552 R phosphate transporter PhoU complement(1355911..1356552) Staphylococcus aureus RF122 3793863 YP_416719.1 CDS SAB1242c NC_007622.1 1356559 1357410 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(1356559..1357410) Staphylococcus aureus RF122 3793864 YP_416720.1 CDS SAB1243c NC_007622.1 1357457 1358374 R phosphate ABC transporter permease complement(1357457..1358374) Staphylococcus aureus RF122 3793865 YP_416721.1 CDS SAB1244c NC_007622.1 1358376 1359302 R phosphate ABC transporter permease complement(1358376..1359302) Staphylococcus aureus RF122 3793866 YP_416722.1 CDS SAB1245c NC_007622.1 1359493 1360476 R phosphate-binding lipoprotein complement(1359493..1360476) Staphylococcus aureus RF122 3793867 YP_416723.1 CDS SAB1246c NC_007622.1 1360848 1361750 R hypothetical protein complement(1360848..1361750) Staphylococcus aureus RF122 3793868 YP_416724.1 CDS SAB1247 NC_007622.1 1361896 1363497 D ATP-binding ABC transporter protein 1361896..1363497 Staphylococcus aureus RF122 3793869 YP_416725.1 CDS lysC NC_007622.1 1364269 1365474 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1364269..1365474 Staphylococcus aureus RF122 3794762 YP_416726.1 CDS asd NC_007622.1 1365538 1366527 D aspartate semialdehyde dehydrogenase 1365538..1366527 Staphylococcus aureus RF122 3794957 YP_416727.1 CDS dapA NC_007622.1 1366529 1367416 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1366529..1367416 Staphylococcus aureus RF122 3795289 YP_416728.1 CDS dapB NC_007622.1 1367413 1368135 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1367413..1368135 Staphylococcus aureus RF122 3795290 YP_416729.1 CDS dapD NC_007622.1 1368162 1368881 D 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1368162..1368881 Staphylococcus aureus RF122 3795291 YP_416730.1 CDS SAB1253 NC_007622.1 1369024 1370175 D peptidase 1369024..1370175 Staphylococcus aureus RF122 3793870 YP_416731.1 CDS alr NC_007622.1 1370180 1371265 D alanine racemase 1370180..1371265 Staphylococcus aureus RF122 3794898 YP_416732.1 CDS lysA NC_007622.1 1371255 1372520 D diaminopimelate decarboxylase 1371255..1372520 Staphylococcus aureus RF122 3794761 YP_416733.1 CDS SAB1256c NC_007622.1 1372614 1373231 R transcriptional regulator complement(1372614..1373231) Staphylococcus aureus RF122 3793871 YP_416734.1 CDS SAB1257c NC_007622.1 1373365 1373766 R hypothetical protein complement(1373365..1373766) Staphylococcus aureus RF122 3793872 YP_416735.1 CDS cspA NC_007622.1 1373964 1374164 R cold shock protein complement(1373964..1374164) Staphylococcus aureus RF122 3795275 YP_416736.1 CDS SAB1259c NC_007622.1 1374335 1374643 R hypothetical protein complement(1374335..1374643) Staphylococcus aureus RF122 3793873 YP_416737.1 CDS SAB1260 NC_007622.1 1374802 1375071 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 1374802..1375071 Staphylococcus aureus RF122 3793874 YP_416738.1 CDS SAB1261 NC_007622.1 1375090 1375719 D hypothetical protein 1375090..1375719 Staphylococcus aureus RF122 3793427 YP_416739.1 CDS SAB1262 NC_007622.1 1375751 1376887 D toxic ion resistance protein 1375751..1376887 Staphylococcus aureus RF122 3793428 YP_416740.1 CDS SAB1263c NC_007622.1 1376961 1378304 R branched-chain amino acid carrier II protein complement(1376961..1378304) Staphylococcus aureus RF122 3793429 YP_416741.1 CDS SAB1264c NC_007622.1 1378529 1380415 R hypothetical protein complement(1378529..1380415) Staphylococcus aureus RF122 3793430 YP_416742.1 CDS SAB1265c NC_007622.1 1380429 1381220 R nitric oxide reductase protein complement(1380429..1381220) Staphylococcus aureus RF122 3793431 YP_416743.1 CDS SAB1266c NC_007622.1 1381401 1381604 R hypothetical protein complement(1381401..1381604) Staphylococcus aureus RF122 3793432 YP_416744.1 CDS SAB1267c NC_007622.1 1381632 1382441 R hypothetical protein complement(1381632..1382441) Staphylococcus aureus RF122 3793433 YP_416745.1 CDS odhB NC_007622.1 1383021 1384289 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(1383021..1384289) Staphylococcus aureus RF122 3793632 YP_416746.1 CDS sucA NC_007622.1 1384303 1387101 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(1384303..1387101) Staphylococcus aureus RF122 3793631 YP_416747.1 CDS arlS NC_007622.1 1387390 1388745 R two-component sensor histidine kinase complement(1387390..1388745) Staphylococcus aureus RF122 3794949 YP_416748.1 CDS arlR NC_007622.1 1388742 1389401 R two-component response regulator complement(1388742..1389401) Staphylococcus aureus RF122 3794948 YP_416749.1 CDS SAB1272c NC_007622.1 1390486 1391100 R hypothetical protein complement(1390486..1391100) Staphylococcus aureus RF122 3793434 YP_416750.1 CDS murG NC_007622.1 1391117 1392187 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(1391117..1392187) Staphylococcus aureus RF122 3794131 YP_416751.1 CDS SAB1274c NC_007622.1 1392199 1392708 R hypothetical protein complement(1392199..1392708) Staphylococcus aureus RF122 3793435 YP_416752.1 CDS SAB1275c NC_007622.1 1393108 1394598 R carboxy-terminal processing proteinase complement(1393108..1394598) Staphylococcus aureus RF122 3793436 YP_416753.1 CDS SAB1276c NC_007622.1 1394780 1395001 R hypothetical protein complement(1394780..1395001) Staphylococcus aureus RF122 3793437 YP_416754.1 CDS SAB1277c NC_007622.1 1395001 1395501 R phosphotransferase system glucose-specific IIA component complement(1395001..1395501) Staphylococcus aureus RF122 3793438 YP_416755.1 CDS SAB1278c NC_007622.1 1395513 1395941 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(1395513..1395941) Staphylococcus aureus RF122 3793439 YP_416756.1 CDS msrA NC_007622.1 1395934 1396467 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(1395934..1396467) Staphylococcus aureus RF122 3793461 YP_416757.1 CDS SAB1280c NC_007622.1 1396553 1397392 R hypothetical protein complement(1396553..1397392) Staphylococcus aureus RF122 3793440 YP_416758.1 CDS dfrB NC_007622.1 1397407 1397886 R dihydrofolate reductase complement(1397407..1397886) Staphylococcus aureus RF122 3794481 YP_416759.1 CDS thyA NC_007622.1 1398086 1399042 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1398086..1399042) Staphylococcus aureus RF122 3794329 YP_416760.1 CDS SAB1283c NC_007622.1 1399466 1399903 R hypothetical protein complement(1399466..1399903) Staphylococcus aureus RF122 3793441 YP_416761.1 CDS SAB1284c NC_007622.1 1399919 1401043 R hypothetical protein complement(1399919..1401043) Staphylococcus aureus RF122 3793442 YP_416762.1 CDS SAB1285c NC_007622.1 1401081 1401332 R hypothetical protein complement(1401081..1401332) Staphylococcus aureus RF122 3793443 YP_416763.1 CDS SAB1286c NC_007622.1 1401344 1401538 R hypothetical protein complement(1401344..1401538) Staphylococcus aureus RF122 3793444 YP_416764.1 CDS SAB1287 NC_007622.1 1401783 1402487 D hypothetical protein 1401783..1402487 Staphylococcus aureus RF122 3793445 YP_416765.1 CDS SAB1288 NC_007622.1 1402728 1403129 D cell wall enzyme 1402728..1403129 Staphylococcus aureus RF122 3793776 YP_416766.1 CDS SAB1289c NC_007622.1 1403175 1408925 R truncated cell surface fibronectin-binding protein complement(1403175..1408925) Staphylococcus aureus RF122 3793777 YP_416767.1 CDS SAB1290c NC_007622.1 1408971 1410803 R truncated cell surface fibronectin-binding protein complement(1408971..1410803) Staphylococcus aureus RF122 3793778 YP_416768.1 CDS SAB1291c NC_007622.1 1410800 1415167 R truncated cell surface fibronectin-binding protein complement(1410800..1415167) Staphylococcus aureus RF122 3793779 YP_416769.1 CDS SAB1292c NC_007622.1 1415268 1416185 R truncated cell surface fibronectin-binding protein complement(1415268..1416185) Staphylococcus aureus RF122 3793780 YP_416770.1 CDS SAB1293c NC_007622.1 1416357 1416749 R truncated cell surface fibronectin-binding protein complement(1416357..1416749) Staphylococcus aureus RF122 3793781 YP_416771.1 CDS SAB1295 NC_007622.1 1417124 1417303 D hypothetical protein 1417124..1417303 Staphylococcus aureus RF122 3793783 YP_416772.1 CDS SAB1296c NC_007622.1 1418565 1419536 R alcohol dehydrogenase complement(1418565..1419536) Staphylococcus aureus RF122 3793784 YP_416773.1 CDS SAB1297 NC_007622.1 1419659 1420078 D hypothetical protein 1419659..1420078 Staphylococcus aureus RF122 3793785 YP_416774.1 CDS SAB1298 NC_007622.1 1420349 1420960 D recombinase 1420349..1420960 Staphylococcus aureus RF122 3793786 YP_416775.1 CDS SAB1299 NC_007622.1 1421380 1422054 D transposase for IS-like element 1421380..1422054 Staphylococcus aureus RF122 3793787 YP_416776.1 CDS SAB1300c NC_007622.1 1422064 1423005 R truncated cell surface fibronectin-binding protein complement(1422064..1423005) Staphylococcus aureus RF122 3793788 YP_416777.1 CDS SAB1301c NC_007622.1 1423403 1424923 R transmembrane efflux protein complement(1423403..1424923) Staphylococcus aureus RF122 3793789 YP_416778.1 CDS SAB1302c NC_007622.1 1425156 1426271 R amino acid ABC transporter permease complement(1425156..1426271) Staphylococcus aureus RF122 3793790 YP_416779.1 CDS tdcB NC_007622.1 1426440 1427342 R threonine dehydratase complement(1426440..1427342) Staphylococcus aureus RF122 3793325 YP_416780.1 CDS ald NC_007622.1 1427437 1428555 R alanine dehydrogenase complement(1427437..1428555) Staphylococcus aureus RF122 3794895 YP_416781.1 CDS SAB1305c NC_007622.1 1429029 1429907 R 5'-3' exonuclease complement(1429029..1429907) Staphylococcus aureus RF122 3793791 YP_416782.1 CDS SAB1306c NC_007622.1 1429927 1433367 R hypothetical protein complement(1429927..1433367) Staphylococcus aureus RF122 3793792 YP_416783.1 CDS SAB1307 NC_007622.1 1433671 1435011 D hypothetical protein 1433671..1435011 Staphylococcus aureus RF122 3793793 YP_416784.1 CDS SAB1308c NC_007622.1 1435170 1435502 R hypothetical protein complement(1435170..1435502) Staphylococcus aureus RF122 3793794 YP_416785.1 CDS SAB1309c NC_007622.1 1435586 1436731 R hypothetical protein complement(1435586..1436731) Staphylococcus aureus RF122 3793795 YP_416786.1 CDS SAB1310c NC_007622.1 1437383 1437727 R hypothetical protein complement(1437383..1437727) Staphylococcus aureus RF122 3792939 YP_416787.1 CDS SAB1311c NC_007622.1 1437741 1438304 R hypothetical protein complement(1437741..1438304) Staphylococcus aureus RF122 3792940 YP_416788.1 CDS SAB1312c NC_007622.1 1438297 1438647 R hypothetical protein complement(1438297..1438647) Staphylococcus aureus RF122 3792941 YP_416789.1 CDS recU NC_007622.1 1439187 1439813 D functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1439187..1439813 Staphylococcus aureus RF122 3794276 YP_416790.1 CDS pbp2 NC_007622.1 1439810 1441993 D penicillin-binding protein 2 1439810..1441993 Staphylococcus aureus RF122 3794117 YP_416791.1 CDS SAB1315c NC_007622.1 1442501 1442842 R hypothetical protein complement(1442501..1442842) Staphylococcus aureus RF122 3792942 YP_416792.1 CDS SAB1316c NC_007622.1 1442847 1443506 R endonuclease III-like protein complement(1442847..1443506) Staphylococcus aureus RF122 3792943 YP_416793.1 CDS SAB1317c NC_007622.1 1443496 1444182 R DNA replication initiation protein complement(1443496..1444182) Staphylococcus aureus RF122 3792944 YP_416794.1 CDS asnC NC_007622.1 1444510 1445802 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(1444510..1445802) Staphylococcus aureus RF122 3794958 YP_416795.1 CDS dinG NC_007622.1 1446123 1448816 R ATP-dependent DNA helicase complement(1446123..1448816) Staphylococcus aureus RF122 3794482 YP_416796.1 CDS birA NC_007622.1 1448840 1449811 R bifunctional biotin operon-related protein and biotin-acetyl-CoA-carboxylase complement(1448840..1449811) Staphylococcus aureus RF122 3792661 YP_416797.1 CDS papS NC_007622.1 1449798 1451000 R catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase complement(1449798..1451000) Staphylococcus aureus RF122 3794116 YP_416798.1 CDS SAB1322c NC_007622.1 1451005 1452147 R glycosyltransferase complement(1451005..1452147) Staphylococcus aureus RF122 3792945 YP_416799.1 CDS SAB1323c NC_007622.1 1452405 1452722 R hypothetical protein complement(1452405..1452722) Staphylococcus aureus RF122 3792946 YP_416800.1 CDS SAB1324c NC_007622.1 1453058 1453756 R hypothetical protein complement(1453058..1453756) Staphylococcus aureus RF122 3792947 YP_416801.1 CDS SAB1325c NC_007622.1 1453810 1454316 R hypothetical protein complement(1453810..1454316) Staphylococcus aureus RF122 3792948 YP_416802.1 CDS SAB1326c NC_007622.1 1454387 1454965 R hypothetical protein complement(1454387..1454965) Staphylococcus aureus RF122 3792949 YP_416803.1 CDS SAB1327c NC_007622.1 1454976 1456220 R hypothetical protein complement(1454976..1456220) Staphylococcus aureus RF122 3792950 YP_416804.1 CDS aroA NC_007622.1 1456227 1457525 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1456227..1457525) Staphylococcus aureus RF122 3794950 YP_416805.1 CDS aroB NC_007622.1 1457535 1458599 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1457535..1458599) Staphylococcus aureus RF122 3794952 YP_416806.1 CDS aroC NC_007622.1 1458625 1459791 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1458625..1459791) Staphylococcus aureus RF122 3794953 YP_416807.1 CDS ndk NC_007622.1 1460260 1460709 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(1460260..1460709) Staphylococcus aureus RF122 3792951 YP_416808.1 CDS SAB1332c NC_007622.1 1460801 1461760 R heptaprenyl diphosphate syntase component II complement(1460801..1461760) Staphylococcus aureus RF122 3792952 YP_416809.1 CDS ubiE NC_007622.1 1461762 1462487 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(1461762..1462487) Staphylococcus aureus RF122 3792953 YP_416810.1 CDS SAB1334c NC_007622.1 1462490 1463062 R hypothetical protein complement(1462490..1463062) Staphylococcus aureus RF122 3792954 YP_416811.1 CDS hup NC_007622.1 1463493 1463765 R DNA-binding protein II complement(1463493..1463765) Staphylococcus aureus RF122 3794094 YP_416812.1 CDS gpsA NC_007622.1 1463936 1464934 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1463936..1464934) Staphylococcus aureus RF122 3794229 YP_416813.1 CDS rpsA NC_007622.1 1466484 1467659 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1466484..1467659) Staphylococcus aureus RF122 3792932 YP_416814.1 CDS SAB1339c NC_007622.1 1467916 1468107 R hypothetical protein complement(1467916..1468107) Staphylococcus aureus RF122 3792956 YP_416815.1 CDS cmk NC_007622.1 1468371 1469030 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1468371..1469030) Staphylococcus aureus RF122 3794837 YP_416816.1 CDS SAB1341 NC_007622.1 1469107 1470075 D L-asparaginase 1469107..1470075 Staphylococcus aureus RF122 3792957 YP_416817.1 CDS SAB1342c NC_007622.1 1470190 1471317 R hypothetical protein complement(1470190..1471317) Staphylococcus aureus RF122 3793465 YP_416818.1 CDS ebpS NC_007622.1 1471561 1473012 R cell surface elastin binding protein complement(1471561..1473012) Staphylococcus aureus RF122 3793354 YP_416819.1 CDS SAB1344c NC_007622.1 1473165 1474544 R ATP-dependent DNA helicase complement(1473165..1474544) Staphylococcus aureus RF122 3793466 YP_416820.1 CDS SAB1345c NC_007622.1 1474534 1475487 R hypothetical protein complement(1474534..1475487) Staphylococcus aureus RF122 3793467 YP_416821.1 CDS SAB1346 NC_007622.1 1475595 1475843 D ferredoxin 1475595..1475843 Staphylococcus aureus RF122 3793468 YP_416822.1 CDS SAB1347c NC_007622.1 1475949 1476494 R hypothetical protein complement(1475949..1476494) Staphylococcus aureus RF122 3793469 YP_416823.1 CDS SAB1348c NC_007622.1 1477101 1478015 R lipoprotein complement(1477101..1478015) Staphylococcus aureus RF122 3793470 YP_416824.1 CDS SAB1349c NC_007622.1 1478106 1478930 R lipoprotein complement(1478106..1478930) Staphylococcus aureus RF122 3793471 YP_416825.1 CDS SAB1350c NC_007622.1 1479068 1480282 R hypothetical protein complement(1479068..1480282) Staphylococcus aureus RF122 3793472 YP_416826.1 CDS SAB1351c NC_007622.1 1480269 1481141 R hypothetical protein complement(1480269..1481141) Staphylococcus aureus RF122 3793473 YP_416827.1 CDS srrB NC_007622.1 1481447 1483198 R respiratory response protein B complement(1481447..1483198) Staphylococcus aureus RF122 3793011 YP_416828.1 CDS rluB NC_007622.1 1484037 1484774 R ribosomal large subunit pseudouridine synthase B complement(1484037..1484774) Staphylococcus aureus RF122 3793101 YP_416829.1 CDS SAB1356c NC_007622.1 1485302 1486057 R hypothetical protein complement(1485302..1486057) Staphylococcus aureus RF122 3793475 YP_416830.1 CDS SAB1357 NC_007622.1 1486125 1486631 D hypothetical protein 1486125..1486631 Staphylococcus aureus RF122 3793476 YP_416831.1 CDS xerD NC_007622.1 1486709 1487596 R site-specific recombinase complement(1486709..1487596) Staphylococcus aureus RF122 3794176 YP_416832.1 CDS fur NC_007622.1 1487645 1488094 R iron transcriptional regulator complement(1487645..1488094) Staphylococcus aureus RF122 3794347 YP_416833.1 CDS SAB1360c NC_007622.1 1488199 1488741 R ADP-ribose pyrophosphatase complement(1488199..1488741) Staphylococcus aureus RF122 3793477 YP_416834.1 CDS SAB1361 NC_007622.1 1488823 1489731 D oxidoreductase 1488823..1489731 Staphylococcus aureus RF122 3793478 YP_416835.1 CDS SAB1362c NC_007622.1 1489947 1490195 R hypothetical protein complement(1489947..1490195) Staphylococcus aureus RF122 3793479 YP_416836.1 CDS SAB1363c NC_007622.1 1490211 1490966 R oxidoreductase complement(1490211..1490966) Staphylococcus aureus RF122 3793480 YP_416837.1 CDS SAB1364 NC_007622.1 1491108 1491923 D pyrrolidine-5-carboxylate reductase 1491108..1491923 Staphylococcus aureus RF122 3793481 YP_416838.1 CDS SAB1365c NC_007622.1 1492028 1492948 R metallo-beta-lactamase complement(1492028..1492948) Staphylococcus aureus RF122 3793482 YP_416839.1 CDS SAB1366 NC_007622.1 1493261 1494745 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1493261..1494745 Staphylococcus aureus RF122 3793483 YP_416840.1 CDS SAB1367 NC_007622.1 1494975 1495841 D AraC family transcriptional regulator 1494975..1495841 Staphylococcus aureus RF122 3793484 YP_416841.1 CDS malA NC_007622.1 1495924 1497573 R alpha-D-1,4-glucosidase complement(1495924..1497573) Staphylococcus aureus RF122 3794768 YP_416842.1 CDS malR NC_007622.1 1497589 1498608 R maltose operon transcriptional repressor complement(1497589..1498608) Staphylococcus aureus RF122 3794769 YP_416843.1 CDS SAB1370c NC_007622.1 1498609 1498818 R hypothetical protein complement(1498609..1498818) Staphylococcus aureus RF122 3794360 YP_416844.1 CDS SAB1371c NC_007622.1 1498802 1499173 R hypothetical protein complement(1498802..1499173) Staphylococcus aureus RF122 3794361 YP_416845.1 CDS SAB1372c NC_007622.1 1499295 1499903 R protease complement(1499295..1499903) Staphylococcus aureus RF122 3794362 YP_416846.1 CDS SAB1373c NC_007622.1 1499878 1501203 R streptolysin-associated protein SagD-like protein complement(1499878..1501203) Staphylococcus aureus RF122 3794363 YP_416847.1 CDS SAB1374c NC_007622.1 1501190 1501753 R hypothetical protein complement(1501190..1501753) Staphylococcus aureus RF122 3794364 YP_416848.1 CDS SAB1375c NC_007622.1 1501772 1502119 R hypothetical protein complement(1501772..1502119) Staphylococcus aureus RF122 3794365 YP_416849.1 CDS SAB1376c NC_007622.1 1502127 1502435 R streptolysin S-associated protein SagB-like protein complement(1502127..1502435) Staphylococcus aureus RF122 3794366 YP_416850.1 CDS SAB1377c NC_007622.1 1502495 1503007 R hypothetical protein complement(1502495..1503007) Staphylococcus aureus RF122 3794367 YP_416851.1 CDS SAB1378c NC_007622.1 1503162 1503299 R hypothetical protein complement(1503162..1503299) Staphylococcus aureus RF122 3794368 YP_416852.1 CDS SAB1379c NC_007622.1 1503308 1504042 R ABC transporter permease complement(1503308..1504042) Staphylococcus aureus RF122 3794369 YP_416853.1 CDS SAB1380c NC_007622.1 1504039 1504890 R ABC transporter complement(1504039..1504890) Staphylococcus aureus RF122 3794370 YP_416854.1 CDS SAB1381c NC_007622.1 1504962 1505114 R hypothetical protein complement(1504962..1505114) Staphylococcus aureus RF122 3794371 YP_416855.1 CDS SAB1382 NC_007622.1 1505329 1505463 D hypothetical protein 1505329..1505463 Staphylococcus aureus RF122 3794372 YP_416856.1 CDS SAB1383 NC_007622.1 1505491 1505646 D hypothetical protein 1505491..1505646 Staphylococcus aureus RF122 3794373 YP_416857.1 CDS gnd NC_007622.1 1505744 1507150 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(1505744..1507150) Staphylococcus aureus RF122 3794225 YP_416858.1 CDS SAB1385c NC_007622.1 1507218 1508465 R peptidase T complement(1507218..1508465) Staphylococcus aureus RF122 3794374 YP_416859.1 CDS SAB1386c NC_007622.1 1508920 1509900 R hypothetical protein complement(1508920..1509900) Staphylococcus aureus RF122 3794375 YP_416860.1 CDS SAB1387c NC_007622.1 1509914 1510351 R hypothetical protein complement(1509914..1510351) Staphylococcus aureus RF122 3794376 YP_416861.1 CDS SAB1388c NC_007622.1 1510701 1511975 R branched-chain alpha-keto acid dehydrogenase E2 complement(1510701..1511975) Staphylococcus aureus RF122 3794377 YP_416862.1 CDS SAB1389c NC_007622.1 1511988 1512971 R 2-oxoisovalerate dehydrogenase beta subunit complement(1511988..1512971) Staphylococcus aureus RF122 3794378 YP_416863.1 CDS SAB1390c NC_007622.1 1512971 1513963 R 2-oxoisovalerate dehydrogenase alpha subunit complement(1512971..1513963) Staphylococcus aureus RF122 3795217 YP_416864.1 CDS SAB1391c NC_007622.1 1513979 1515400 R dihydrolipoamide dehydrogenase complement(1513979..1515400) Staphylococcus aureus RF122 3795218 YP_416865.1 CDS SAB1392c NC_007622.1 1515551 1517230 R DNA repair protein complement(1515551..1517230) Staphylococcus aureus RF122 3795219 YP_416866.1 CDS argR NC_007622.1 1517246 1517698 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(1517246..1517698) Staphylococcus aureus RF122 3794946 YP_416867.1 CDS SAB1394c NC_007622.1 1518129 1519010 R geranyltranstransferase complement(1518129..1519010) Staphylococcus aureus RF122 3795220 YP_416868.1 CDS SAB1395c NC_007622.1 1518988 1519218 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(1518988..1519218) Staphylococcus aureus RF122 3795221 YP_416869.1 CDS xseA NC_007622.1 1519211 1520548 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(1519211..1520548) Staphylococcus aureus RF122 3795222 YP_416870.1 CDS nusB NC_007622.1 1520565 1520954 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(1520565..1520954) Staphylococcus aureus RF122 3795223 YP_416871.1 CDS SAB1398c NC_007622.1 1521014 1521376 R hypothetical protein complement(1521014..1521376) Staphylococcus aureus RF122 3795224 YP_416872.1 CDS accC NC_007622.1 1521391 1522746 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(1521391..1522746) Staphylococcus aureus RF122 3794819 YP_416873.1 CDS accB NC_007622.1 1522746 1523210 R acetyl-CoA carboxylase biotin carboxyl carrier subunit complement(1522746..1523210) Staphylococcus aureus RF122 3794817 YP_416874.1 CDS efp NC_007622.1 1523684 1524241 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(1523684..1524241) Staphylococcus aureus RF122 3793355 YP_416875.1 CDS SAB1402c NC_007622.1 1524267 1525328 R proline dipeptidase complement(1524267..1525328) Staphylococcus aureus RF122 3795225 YP_416876.1 CDS SAB1403 NC_007622.1 1525433 1526014 D hypothetical protein 1525433..1526014 Staphylococcus aureus RF122 3795226 YP_416877.1 CDS SAB1404 NC_007622.1 1526028 1526246 D hypothetical protein 1526028..1526246 Staphylococcus aureus RF122 3795227 YP_416878.1 CDS SAB1405c NC_007622.1 1526310 1527140 R lipoate-protein ligase A complement(1526310..1527140) Staphylococcus aureus RF122 3795228 YP_416879.1 CDS SAB1406 NC_007622.1 1527298 1527684 D hypothetical protein 1527298..1527684 Staphylococcus aureus RF122 3795229 YP_416880.1 CDS SAB1407c NC_007622.1 1528048 1529520 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(1528048..1529520) Staphylococcus aureus RF122 3795230 YP_416881.1 CDS SAB1408c NC_007622.1 1529513 1530868 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 complement(1529513..1530868) Staphylococcus aureus RF122 3795231 YP_416882.1 CDS gcvT NC_007622.1 1530879 1531970 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(1530879..1531970) Staphylococcus aureus RF122 3794357 YP_416883.1 CDS SAB1410c NC_007622.1 1532129 1532653 R hypothetical protein complement(1532129..1532653) Staphylococcus aureus RF122 3795232 YP_416884.1 CDS SAB1411c NC_007622.1 1532886 1533353 R hypothetical protein complement(1532886..1533353) Staphylococcus aureus RF122 3795233 YP_416885.1 CDS SAB1412c NC_007622.1 1533301 1533600 R hypothetical protein complement(1533301..1533600) Staphylococcus aureus RF122 3795234 YP_416886.1 CDS SAB1413c NC_007622.1 1533587 1534033 R hypothetical protein complement(1533587..1534033) Staphylococcus aureus RF122 3795235 YP_416887.1 CDS SAB1414c NC_007622.1 1534011 1534322 R exogenous DNA-binding protein complement(1534011..1534322) Staphylococcus aureus RF122 3795236 YP_416888.1 CDS SAB1416c NC_007622.1 1535378 1536352 R late competence protein complement(1535378..1536352) Staphylococcus aureus RF122 3792631 YP_416889.1 CDS SAB1417c NC_007622.1 1536404 1537027 R metallo-beta-lactamase superfamily protein complement(1536404..1537027) Staphylococcus aureus RF122 3792632 YP_416890.1 CDS SAB1418c NC_007622.1 1537024 1537353 R hypothetical protein complement(1537024..1537353) Staphylococcus aureus RF122 3792633 YP_416891.1 CDS glkA NC_007622.1 1537353 1538339 R glucokinase complement(1537353..1538339) Staphylococcus aureus RF122 3793645 YP_416892.1 CDS SAB1420c NC_007622.1 1538336 1538539 R hypothetical protein complement(1538336..1538539) Staphylococcus aureus RF122 3792634 YP_416893.1 CDS SAB1421c NC_007622.1 1538520 1539983 R hypothetical protein complement(1538520..1539983) Staphylococcus aureus RF122 3792635 YP_416894.1 CDS SAB1422c NC_007622.1 1539995 1540534 R hypothetical protein complement(1539995..1540534) Staphylococcus aureus RF122 3792636 YP_416895.1 CDS rpmG NC_007622.1 1540743 1540892 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(1540743..1540892) Staphylococcus aureus RF122 3792924 YP_416896.1 CDS pbpF NC_007622.1 1541005 1543080 R penicillin-binding protein 3 complement(1541005..1543080) Staphylococcus aureus RF122 3794120 YP_416897.1 CDS sodA NC_007622.1 1543201 1543800 R superoxide dismutase complement(1543201..1543800) Staphylococcus aureus RF122 3793001 YP_416898.1 CDS zur NC_007622.1 1544076 1544486 R zinc-specific metalloregulator complement(1544076..1544486) Staphylococcus aureus RF122 3792725 YP_416899.1 CDS mreB NC_007622.1 1544473 1545345 R ABC transporter protein complement(1544473..1545345) Staphylococcus aureus RF122 3793459 YP_416900.1 CDS mreA NC_007622.1 1545378 1546163 R ABC transporter protein complement(1545378..1546163) Staphylococcus aureus RF122 3793458 YP_416901.1 CDS SAB1429c NC_007622.1 1546289 1547179 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(1546289..1547179) Staphylococcus aureus RF122 3792637 YP_416902.1 CDS SAB1430c NC_007622.1 1547189 1548535 R ATP-dependent RNA helicase complement(1547189..1548535) Staphylococcus aureus RF122 3792638 YP_416903.1 CDS SAB1431c NC_007622.1 1548649 1549749 R hypothetical protein complement(1548649..1549749) Staphylococcus aureus RF122 3792639 YP_416904.1 CDS SAB1432c NC_007622.1 1549752 1550429 R hypothetical protein complement(1549752..1550429) Staphylococcus aureus RF122 3792640 YP_416905.1 CDS rpoD NC_007622.1 1550560 1551666 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(1550560..1551666) Staphylococcus aureus RF122 3792930 YP_416906.1 CDS dnaG NC_007622.1 1551890 1553689 R DNA primase complement(1551890..1553689) Staphylococcus aureus RF122 3794493 YP_416907.1 CDS SAB1435c NC_007622.1 1553750 1554568 R hypothetical protein complement(1553750..1554568) Staphylococcus aureus RF122 3792641 YP_416908.1 CDS SAB1436c NC_007622.1 1554579 1555118 R hypothetical protein complement(1554579..1555118) Staphylococcus aureus RF122 3792642 YP_416909.1 CDS glyS NC_007622.1 1555537 1556928 D Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 1555537..1556928 Staphylococcus aureus RF122 3794223 YP_416910.1 CDS SAB1438c NC_007622.1 1557079 1557831 R recombination protein complement(1557079..1557831) Staphylococcus aureus RF122 3792643 YP_416911.1 CDS era NC_007622.1 1557853 1558752 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1557853..1558752) Staphylococcus aureus RF122 3793357 YP_416912.1 CDS cdd NC_007622.1 1558753 1559157 R cytidine deaminase complement(1558753..1559157) Staphylococcus aureus RF122 3794412 YP_416913.1 CDS SAB1441c NC_007622.1 1559168 1559512 R diacylglycerol kinase complement(1559168..1559512) Staphylococcus aureus RF122 3792644 YP_416914.1 CDS SAB1442c NC_007622.1 1559515 1559982 R hypothetical protein complement(1559515..1559982) Staphylococcus aureus RF122 3792645 YP_416915.1 CDS SAB1443c NC_007622.1 1559983 1560930 R phosphate starvation-induced protein complement(1559983..1560930) Staphylococcus aureus RF122 3792646 YP_416916.1 CDS SAB1444c NC_007622.1 1561230 1561928 R hypothetical protein complement(1561230..1561928) Staphylococcus aureus RF122 3792647 YP_416917.1 CDS SAB1445c NC_007622.1 1561945 1562934 R hypothetical protein complement(1561945..1562934) Staphylococcus aureus RF122 3792648 YP_416918.1 CDS SAB1446c NC_007622.1 1562952 1563659 R hypothetical protein complement(1562952..1563659) Staphylococcus aureus RF122 3793835 YP_416919.1 CDS rpsU NC_007622.1 1563879 1564055 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(1563879..1564055) Staphylococcus aureus RF122 3794997 YP_416920.1 CDS SAB1448c NC_007622.1 1564348 1565694 R hypothetical protein complement(1564348..1565694) Staphylococcus aureus RF122 3793836 YP_416921.1 CDS SAB1449c NC_007622.1 1565701 1566453 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(1565701..1566453) Staphylococcus aureus RF122 3793837 YP_416922.1 CDS prmA NC_007622.1 1566455 1567393 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(1566455..1567393) Staphylococcus aureus RF122 3793838 YP_416923.1 CDS dnaJ NC_007622.1 1567397 1568536 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(1567397..1568536) Staphylococcus aureus RF122 3794495 YP_416924.1 CDS dnaK NC_007622.1 1568672 1570504 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1568672..1570504) Staphylococcus aureus RF122 3793348 YP_416925.1 CDS grpE NC_007622.1 1570573 1571199 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(1570573..1571199) Staphylococcus aureus RF122 3794235 YP_416926.1 CDS hrcA NC_007622.1 1571231 1572208 R heat-inducible transcription repressor complement(1571231..1572208) Staphylococcus aureus RF122 3794088 YP_416927.1 CDS SAB1455c NC_007622.1 1572308 1573432 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1572308..1573432) Staphylococcus aureus RF122 3793839 YP_416928.1 CDS SAB1456c NC_007622.1 1573604 1573855 R hypothetical protein complement(1573604..1573855) Staphylococcus aureus RF122 3793840 YP_416929.1 CDS lepA NC_007622.1 1573993 1575816 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1573993..1575816) Staphylococcus aureus RF122 3794803 YP_416930.1 CDS rpsT NC_007622.1 1576162 1576413 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1576162..1576413 Staphylococcus aureus RF122 3794996 YP_416931.1 CDS holA NC_007622.1 1576458 1577432 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1576458..1577432) Staphylococcus aureus RF122 3793841 YP_416932.1 CDS SAB1461c NC_007622.1 1579697 1580158 R late competence deaminase protein complement(1579697..1580158) Staphylococcus aureus RF122 3793843 YP_416933.1 CDS SAB1462c NC_007622.1 1580250 1580927 R competence-related membrane protein complement(1580250..1580927) Staphylococcus aureus RF122 3793844 YP_416934.1 CDS SAB1463c NC_007622.1 1580976 1581692 R hypothetical protein complement(1580976..1581692) Staphylococcus aureus RF122 3793845 YP_416935.1 CDS SAB1464c NC_007622.1 1581695 1582048 R hypothetical protein complement(1581695..1582048) Staphylococcus aureus RF122 3793846 YP_416936.1 CDS SAB1465c NC_007622.1 1582049 1582633 R hypothetical protein complement(1582049..1582633) Staphylococcus aureus RF122 3793847 YP_416937.1 CDS SAB1466c NC_007622.1 1582623 1583192 R nicotinate-nucleotide adenylyltransferase complement(1582623..1583192) Staphylococcus aureus RF122 3793848 YP_416938.1 CDS SAB1467c NC_007622.1 1583195 1583485 R hypothetical protein complement(1583195..1583485) Staphylococcus aureus RF122 3793849 YP_416939.1 CDS aroE NC_007622.1 1583489 1584295 R shikimate 5-dehydrogenase complement(1583489..1584295) Staphylococcus aureus RF122 3794954 YP_416940.1 CDS SAB1469c NC_007622.1 1584309 1585409 R in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH complement(1584309..1585409) Staphylococcus aureus RF122 3793850 YP_416941.1 CDS SAB1470c NC_007622.1 1585410 1585937 R hypothetical protein complement(1585410..1585937) Staphylococcus aureus RF122 3793851 YP_416942.1 CDS SAB1471c NC_007622.1 1585957 1586643 R hypothetical protein complement(1585957..1586643) Staphylococcus aureus RF122 3793852 YP_416943.1 CDS SAB1472 NC_007622.1 1586955 1587224 D hypothetical protein 1586955..1587224 Staphylococcus aureus RF122 3793853 YP_416944.1 CDS SAB1474c NC_007622.1 1588596 1589816 R hypothetical protein complement(1588596..1589816) Staphylococcus aureus RF122 3794964 YP_416945.1 CDS SAB1475c NC_007622.1 1590107 1591336 R hypothetical protein complement(1590107..1591336) Staphylococcus aureus RF122 3794965 YP_416946.1 CDS SAB1476c NC_007622.1 1591348 1592100 R LamB/YcsF family protein complement(1591348..1592100) Staphylococcus aureus RF122 3794966 YP_416947.1 CDS accC NC_007622.1 1592100 1593461 R acetyl-CoA biotin carboxylase complement(1592100..1593461) Staphylococcus aureus RF122 3794820 YP_416948.1 CDS accB NC_007622.1 1593475 1593924 R biotin carboxyl carrier protein of acetyl-CoA carboxylase complement(1593475..1593924) Staphylococcus aureus RF122 3794818 YP_416949.1 CDS SAB1479c NC_007622.1 1593926 1594936 R hypothetical protein complement(1593926..1594936) Staphylococcus aureus RF122 3794967 YP_416950.1 CDS SAB1480c NC_007622.1 1594926 1595684 R hypothetical protein complement(1594926..1595684) Staphylococcus aureus RF122 3794968 YP_416951.1 CDS greA NC_007622.1 1595986 1596462 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(1595986..1596462) Staphylococcus aureus RF122 3794230 YP_416952.1 CDS udk NC_007622.1 1596490 1597113 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(1596490..1597113) Staphylococcus aureus RF122 3795133 YP_416953.1 CDS SAB1483c NC_007622.1 1597113 1598381 R proteinase complement(1597113..1598381) Staphylococcus aureus RF122 3794969 YP_416954.1 CDS SAB1484c NC_007622.1 1598393 1599322 R proteinase complement(1598393..1599322) Staphylococcus aureus RF122 3794970 YP_416955.1 CDS SAB1485c NC_007622.1 1599319 1599957 R hypothetical protein complement(1599319..1599957) Staphylococcus aureus RF122 3794971 YP_416956.1 CDS SAB1486c NC_007622.1 1600242 1600550 R hypothetical protein complement(1600242..1600550) Staphylococcus aureus RF122 3794972 YP_416957.1 CDS SAB1487c NC_007622.1 1600565 1600993 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(1600565..1600993) Staphylococcus aureus RF122 3794973 YP_416958.1 CDS SAB1488c NC_007622.1 1600997 1601257 R hypothetical protein complement(1600997..1601257) Staphylococcus aureus RF122 3794974 YP_416959.1 CDS alaS NC_007622.1 1601320 1603950 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1601320..1603950) Staphylococcus aureus RF122 3794894 YP_416960.1 CDS SAB1490c NC_007622.1 1604293 1606770 R deoxyribonuclease complement(1604293..1606770) Staphylococcus aureus RF122 3794975 YP_416961.1 CDS SAB1491c NC_007622.1 1606772 1607440 R hypothetical protein complement(1606772..1607440) Staphylococcus aureus RF122 3794976 YP_416962.1 CDS mnmA NC_007622.1 1607906 1609024 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1607906..1609024) Staphylococcus aureus RF122 3794336 YP_416963.1 CDS SAB1493c NC_007622.1 1609025 1610167 R similar to B. subtilis yrvO protein; iron-sulfur cofactor synthesis protein complement(1609025..1610167) Staphylococcus aureus RF122 3794977 YP_416964.1 CDS SAB1494 NC_007622.1 1610479 1611492 D oxygenase 1610479..1611492 Staphylococcus aureus RF122 3794978 YP_416965.1 CDS SAB1495 NC_007622.1 1611680 1611895 D hypothetical protein 1611680..1611895 Staphylococcus aureus RF122 3794979 YP_416966.1 CDS SAB1496c NC_007622.1 1612157 1612579 R hypothetical protein complement(1612157..1612579) Staphylococcus aureus RF122 3794980 YP_416967.1 CDS SAB1497 NC_007622.1 1612664 1613938 D recombination factor protein RarA 1612664..1613938 Staphylococcus aureus RF122 3794981 YP_416968.1 CDS SAB1498c NC_007622.1 1614099 1614872 R hypothetical protein complement(1614099..1614872) Staphylococcus aureus RF122 3794982 YP_416969.1 CDS aspS NC_007622.1 1615333 1617099 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1615333..1617099) Staphylococcus aureus RF122 3794960 YP_416970.1 CDS hisS NC_007622.1 1617115 1618377 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1617115..1618377) Staphylococcus aureus RF122 3794920 YP_416971.1 CDS SAB1501c NC_007622.1 1618838 1619713 R N-acetylmuramoyl-L-alanine amidase complement(1618838..1619713) Staphylococcus aureus RF122 3794653 YP_416972.1 CDS dtd NC_007622.1 1619710 1620162 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(1619710..1620162) Staphylococcus aureus RF122 3793353 YP_416973.1 CDS relA NC_007622.1 1620174 1622384 R GTP pyrophosphokinase complement(1620174..1622384) Staphylococcus aureus RF122 3794277 YP_416974.1 CDS apt NC_007622.1 1622791 1623309 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1622791..1623309) Staphylococcus aureus RF122 3794901 YP_416975.1 CDS SAB1505c NC_007622.1 1623331 1625604 R single-strand DNA-specific exonuclease complement(1623331..1625604) Staphylococcus aureus RF122 3794654 YP_416976.1 CDS secF NC_007622.1 1625807 1628086 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF complement(1625807..1628086) Staphylococcus aureus RF122 3794614 YP_416977.1 CDS SAB1507c NC_007622.1 1628361 1628621 R hypothetical protein complement(1628361..1628621) Staphylococcus aureus RF122 3794655 YP_416978.1 CDS tgt NC_007622.1 1628640 1629779 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1628640..1629779) Staphylococcus aureus RF122 3794321 YP_416979.1 CDS queA NC_007622.1 1629802 1630866 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(1629802..1630866) Staphylococcus aureus RF122 3794268 YP_416980.1 CDS ruvB NC_007622.1 1630829 1631833 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1630829..1631833) Staphylococcus aureus RF122 3795002 YP_416981.1 CDS ruvA NC_007622.1 1631865 1632467 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(1631865..1632467) Staphylococcus aureus RF122 3795001 YP_416982.1 CDS SAB1512c NC_007622.1 1632481 1632939 R hypothetical protein complement(1632481..1632939) Staphylococcus aureus RF122 3794656 YP_416983.1 CDS obgE NC_007622.1 1632949 1634241 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1632949..1634241) Staphylococcus aureus RF122 3794657 YP_416984.1 CDS rpmA NC_007622.1 1634464 1634748 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1634464..1634748) Staphylococcus aureus RF122 3795098 YP_416985.1 CDS SAB1515c NC_007622.1 1634760 1635080 R hypothetical protein complement(1634760..1635080) Staphylococcus aureus RF122 3794658 YP_416986.1 CDS rplU NC_007622.1 1635086 1635394 R 50S ribosomal protein L21 complement(1635086..1635394) Staphylococcus aureus RF122 3795094 YP_416987.1 CDS SAB1517c NC_007622.1 1635561 1636091 R hypothetical protein complement(1635561..1636091) Staphylococcus aureus RF122 3794659 YP_416988.1 CDS SAB1518c NC_007622.1 1636091 1636933 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1636091..1636933) Staphylococcus aureus RF122 3794660 YP_416989.1 CDS SAB1519c NC_007622.1 1637324 1637797 R hypothetical protein complement(1637324..1637797) Staphylococcus aureus RF122 3794661 YP_416990.1 CDS SAB1520c NC_007622.1 1638271 1638555 R hypothetical protein complement(1638271..1638555) Staphylococcus aureus RF122 3794662 YP_416991.1 CDS radC NC_007622.1 1638623 1639309 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(1638623..1639309) Staphylococcus aureus RF122 3794270 YP_416992.1 CDS SAB1522c NC_007622.1 1639412 1640014 R leader peptidase protein complement(1639412..1640014) Staphylococcus aureus RF122 3794663 YP_416993.1 CDS folC NC_007622.1 1640282 1641553 R folylpolyglutamate synthase complement(1640282..1641553) Staphylococcus aureus RF122 3794748 YP_416994.1 CDS valS NC_007622.1 1641566 1644196 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1641566..1644196) Staphylococcus aureus RF122 3794172 YP_416995.1 CDS tag NC_007622.1 1644600 1645160 D DNA-3-methyladenine glycosidase 1644600..1645160 Staphylococcus aureus RF122 3793316 YP_416996.1 CDS SAB1526c NC_007622.1 1645383 1646456 R hypothetical protein complement(1645383..1646456) Staphylococcus aureus RF122 3794664 YP_416997.1 CDS hemL NC_007622.1 1646651 1647937 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(1646651..1647937) Staphylococcus aureus RF122 3794911 YP_416998.1 CDS hemB NC_007622.1 1647985 1648959 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1647985..1648959) Staphylococcus aureus RF122 3794906 YP_416999.1 CDS hemD NC_007622.1 1648962 1649630 R uroporphyrinogen III synthase complement(1648962..1649630) Staphylococcus aureus RF122 3794908 YP_417000.1 CDS hemC NC_007622.1 1649652 1650578 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(1649652..1650578) Staphylococcus aureus RF122 3794907 YP_417001.1 CDS SAB1531c NC_007622.1 1650620 1651435 R membrane uroporphyrinogen III methylase complement(1650620..1651435) Staphylococcus aureus RF122 3794665 YP_417002.1 CDS hemA NC_007622.1 1651457 1652803 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(1651457..1652803) Staphylococcus aureus RF122 3794241 YP_417003.1 CDS engB NC_007622.1 1653020 1653610 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1653020..1653610) Staphylococcus aureus RF122 3794666 YP_417004.1 CDS clpX NC_007622.1 1653764 1655026 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1653764..1655026) Staphylococcus aureus RF122 3794836 YP_417005.1 CDS tig NC_007622.1 1655177 1656478 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1655177..1656478) Staphylococcus aureus RF122 3794330 YP_417006.1 CDS SAB1536c NC_007622.1 1656641 1657570 R hypothetical protein complement(1656641..1657570) Staphylococcus aureus RF122 3794667 YP_417007.1 CDS SAB1537c NC_007622.1 1657589 1658197 R hypothetical protein complement(1657589..1658197) Staphylococcus aureus RF122 3794668 YP_417008.1 CDS rplT NC_007622.1 1658339 1658695 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1658339..1658695) Staphylococcus aureus RF122 3795093 YP_417009.1 CDS rpmI NC_007622.1 1658742 1658942 R 50S ribosomal protein L35 complement(1658742..1658942) Staphylococcus aureus RF122 3792926 YP_417010.1 CDS infC NC_007622.1 1658971 1659498 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(1658971..1659498) Staphylococcus aureus RF122 3795264 YP_417011.1 CDS lysP NC_007622.1 1659727 1661220 R lysine specific permease complement(1659727..1661220) Staphylococcus aureus RF122 3794763 YP_417012.1 CDS thrS NC_007622.1 1661647 1663584 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1661647..1663584) Staphylococcus aureus RF122 3794328 YP_417013.1 CDS dnaI NC_007622.1 1663995 1664915 R Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI complement(1663995..1664915) Staphylococcus aureus RF122 3794494 YP_417014.1 CDS dnaB NC_007622.1 1664915 1666315 R chromosome replication initiation and membrane attachment protein complement(1664915..1666315) Staphylococcus aureus RF122 3794489 YP_417015.1 CDS nrdR NC_007622.1 1666316 1666786 R NrdR family transcriptional regulator complement(1666316..1666786) Staphylococcus aureus RF122 3794669 YP_417016.1 CDS gap NC_007622.1 1666996 1668021 R glyceraldehyde 3-phosphate dehydrogenase 2 complement(1666996..1668021) Staphylococcus aureus RF122 3794350 YP_417017.1 CDS coaE NC_007622.1 1668191 1668814 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(1668191..1668814) Staphylococcus aureus RF122 3794839 YP_417018.1 CDS SAB1548c NC_007622.1 1668830 1669702 R formamidopyrimidine-DNA glycosylase complement(1668830..1669702) Staphylococcus aureus RF122 3794670 YP_417019.1 CDS polA NC_007622.1 1669718 1672348 R DNA polymerase I complement(1669718..1672348) Staphylococcus aureus RF122 3794027 YP_417020.1 CDS SAB1550c NC_007622.1 1672642 1674129 R hypothetical protein complement(1672642..1674129) Staphylococcus aureus RF122 3794671 YP_417021.1 CDS phoR NC_007622.1 1674628 1676292 R alkaline phosphatase synthesis sensor protein complement(1674628..1676292) Staphylococcus aureus RF122 3794473 YP_417022.1 CDS phoP NC_007622.1 1676289 1676993 R alkaline phosphatase synthesis transcriptional regulatory protein complement(1676289..1676993) Staphylococcus aureus RF122 3794472 YP_417023.1 CDS citC NC_007622.1 1677382 1678650 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(1677382..1678650) Staphylococcus aureus RF122 3794416 YP_417024.1 CDS citZ NC_007622.1 1678699 1679820 R catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase complement(1678699..1679820) Staphylococcus aureus RF122 3794418 YP_417025.1 CDS cycA NC_007622.1 1680168 1681529 D D-serine, D-alanine, glycine transporter 1680168..1681529 Staphylococcus aureus RF122 3795283 YP_417026.1 CDS pyk NC_007622.1 1681879 1683636 R pyruvate kinase complement(1681879..1683636) Staphylococcus aureus RF122 3794684 YP_417027.1 CDS pfkA NC_007622.1 1683658 1684626 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(1683658..1684626) Staphylococcus aureus RF122 3794465 YP_417028.1 CDS accA NC_007622.1 1684895 1685839 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1684895..1685839) Staphylococcus aureus RF122 3794816 YP_417029.1 CDS accD NC_007622.1 1685839 1686696 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(1685839..1686696) Staphylococcus aureus RF122 3794821 YP_417030.1 CDS SAB1560c NC_007622.1 1686891 1688120 R NAD-dependent malic enzyme complement(1686891..1688120) Staphylococcus aureus RF122 3794672 YP_417031.1 CDS dnaE NC_007622.1 1688570 1691767 R DNA polymerase III alpha subunit complement(1688570..1691767) Staphylococcus aureus RF122 3794492 YP_417032.1 CDS SAB1562c NC_007622.1 1691788 1692729 R hypothetical protein complement(1691788..1692729) Staphylococcus aureus RF122 3792901 YP_417033.1 CDS SAB1563c NC_007622.1 1693068 1694366 R DNA-binding protein complement(1693068..1694366) Staphylococcus aureus RF122 3792902 YP_417034.1 CDS SAB1564 NC_007622.1 1694571 1694984 D hypothetical protein 1694571..1694984 Staphylococcus aureus RF122 3792903 YP_417035.1 CDS SAB1565 NC_007622.1 1695062 1695463 D hypothetical protein 1695062..1695463 Staphylococcus aureus RF122 3792904 YP_417036.1 CDS SAB1566c NC_007622.1 1695544 1696233 R catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase complement(1695544..1696233) Staphylococcus aureus RF122 3792905 YP_417037.1 CDS SAB1567 NC_007622.1 1696387 1697463 D Xaa-Pro dipeptidase-like protein 1696387..1697463 Staphylococcus aureus RF122 3792906 YP_417038.1 CDS ald NC_007622.1 1697779 1698897 R alanine dehydrogenase complement(1697779..1698897) Staphylococcus aureus RF122 3794896 YP_417039.1 CDS SAB1569 NC_007622.1 1699038 1699538 D stress response protein 1699038..1699538 Staphylococcus aureus RF122 3792907 YP_417040.1 CDS ackA NC_007622.1 1699784 1700986 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(1699784..1700986) Staphylococcus aureus RF122 3794822 YP_417041.1 CDS SAB1571c NC_007622.1 1701074 1702021 R hypothetical protein complement(1701074..1702021) Staphylococcus aureus RF122 3792908 YP_417042.1 CDS tpx NC_007622.1 1702144 1702638 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(1702144..1702638) Staphylococcus aureus RF122 3792909 YP_417043.1 CDS SAB1573c NC_007622.1 1702736 1703506 R hypothetical protein complement(1702736..1703506) Staphylococcus aureus RF122 3792910 YP_417044.1 CDS SAB1574c NC_007622.1 1703550 1704773 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(1703550..1704773) Staphylococcus aureus RF122 3792911 YP_417045.1 CDS SAB1575c NC_007622.1 1704773 1705921 R aminotransferase complement(1704773..1705921) Staphylococcus aureus RF122 3792912 YP_417046.1 CDS SAB1576c NC_007622.1 1706247 1707941 R acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA complement(1706247..1707941) Staphylococcus aureus RF122 3792913 YP_417047.1 CDS SAB1577 NC_007622.1 1708078 1708542 D hypothetical protein 1708078..1708542 Staphylococcus aureus RF122 3792914 YP_417048.1 CDS rpsD NC_007622.1 1708786 1709388 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1708786..1709388 Staphylococcus aureus RF122 3792935 YP_417049.1 CDS SAB1579c NC_007622.1 1709602 1710345 R hypothetical protein complement(1709602..1710345) Staphylococcus aureus RF122 3792915 YP_417050.1 CDS SAB1580 NC_007622.1 1710425 1710871 D osmotic stress-related protein 1710425..1710871 Staphylococcus aureus RF122 3792916 YP_417051.1 CDS SAB1581 NC_007622.1 1710986 1712146 D soluble hydrogenase subunit 1710986..1712146 Staphylococcus aureus RF122 3792917 YP_417052.1 CDS SAB1582 NC_007622.1 1712133 1713737 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1712133..1713737 Staphylococcus aureus RF122 3792918 YP_417053.1 CDS SAB1583c NC_007622.1 1713887 1715017 R hypothetical protein complement(1713887..1715017) Staphylococcus aureus RF122 3792919 YP_417054.1 CDS SAB1584c NC_007622.1 1715124 1716590 R PTS system N-acetylglucosamine-specific IIABC component complement(1715124..1716590) Staphylococcus aureus RF122 3795022 YP_417055.1 CDS SAB1585c NC_007622.1 1716718 1717335 R 1-acylglycerol-3-phosphate O-acyltransferase complement(1716718..1717335) Staphylococcus aureus RF122 3795023 YP_417056.1 CDS SAB1586 NC_007622.1 1717507 1718781 D serine protease 1717507..1718781 Staphylococcus aureus RF122 3795024 YP_417057.1 CDS tyrS NC_007622.1 1718875 1720137 R tyrosyl-tRNA synthetase complement(1718875..1720137) Staphylococcus aureus RF122 3795132 YP_417058.1 CDS SAB1588 NC_007622.1 1720518 1721423 D penicillin-binding protein 1A 1720518..1721423 Staphylococcus aureus RF122 3795025 YP_417059.1 CDS SAB1589c NC_007622.1 1721534 1722850 R transposase complement(1721534..1722850) Staphylococcus aureus RF122 3795026 YP_417060.1 CDS SAB1590c NC_007622.1 1723135 1724988 R iron-regulated surface protein complement(1723135..1724988) Staphylococcus aureus RF122 3795027 YP_417061.1 CDS SAB1591c NC_007622.1 1725040 1725816 R surface-anchored iron-regulated surface protein complement(1725040..1725816) Staphylococcus aureus RF122 3795028 YP_417062.1 CDS fhs NC_007622.1 1726149 1727816 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(1726149..1727816) Staphylococcus aureus RF122 3794734 YP_417063.1 CDS acsA NC_007622.1 1728256 1729962 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(1728256..1729962) Staphylococcus aureus RF122 3794825 YP_417064.1 CDS acuA NC_007622.1 1730131 1730763 D acetoin utilization protein 1730131..1730763 Staphylococcus aureus RF122 3794826 YP_417065.1 CDS acuC NC_007622.1 1730788 1731957 D acetoin utilization protein 1730788..1731957 Staphylococcus aureus RF122 3794827 YP_417066.1 CDS ccpA NC_007622.1 1732055 1733044 R catabolite control protein A complement(1732055..1733044) Staphylococcus aureus RF122 3794411 YP_417067.1 CDS aroA NC_007622.1 1733582 1734673 R catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase complement(1733582..1734673) Staphylococcus aureus RF122 3794951 YP_417068.1 CDS SAB1598c NC_007622.1 1735368 1736318 R hypothetical protein complement(1735368..1736318) Staphylococcus aureus RF122 3795029 YP_417069.1 CDS SAB1599c NC_007622.1 1736392 1736883 R hypothetical protein complement(1736392..1736883) Staphylococcus aureus RF122 3795030 YP_417070.1 CDS murC NC_007622.1 1736957 1738195 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(1736957..1738195) Staphylococcus aureus RF122 3794128 YP_417071.1 CDS SAB1601c NC_007622.1 1738295 1742125 R SpoIIIE family cell division protein complement(1738295..1742125) Staphylococcus aureus RF122 3795031 YP_417072.1 CDS SAB1602c NC_007622.1 1742146 1742742 R phenylalanyl-tRNA synthetase beta subunit complement(1742146..1742742) Staphylococcus aureus RF122 3795032 YP_417073.1 CDS SAB1603c NC_007622.1 1742771 1743628 R hypothetical protein complement(1742771..1743628) Staphylococcus aureus RF122 3795033 YP_417074.1 CDS SAB1604c NC_007622.1 1743728 1744039 R thioredoxin family protein complement(1743728..1744039) Staphylococcus aureus RF122 3795034 YP_417075.1 CDS SAB1605c NC_007622.1 1744104 1745180 R endo-1,4-beta-glucanase complement(1744104..1745180) Staphylococcus aureus RF122 3795035 YP_417076.1 CDS SAB1606 NC_007622.1 1745267 1745578 D hypothetical protein 1745267..1745578 Staphylococcus aureus RF122 3795036 YP_417077.1 CDS SAB1607c NC_007622.1 1745703 1746545 R hypothetical protein complement(1745703..1746545) Staphylococcus aureus RF122 3795037 YP_417078.1 CDS trmB NC_007622.1 1747016 1747660 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1747016..1747660) Staphylococcus aureus RF122 3795038 YP_417079.1 CDS SAB1609c NC_007622.1 1747675 1748466 R hypothetical protein complement(1747675..1748466) Staphylococcus aureus RF122 3795039 YP_417080.1 CDS dat NC_007622.1 1749013 1749861 R D-alanine aminotransferase complement(1749013..1749861) Staphylococcus aureus RF122 3795292 YP_417081.1 CDS SAB1611c NC_007622.1 1749865 1751274 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(1749865..1751274) Staphylococcus aureus RF122 3795040 YP_417082.1 CDS SAB1612c NC_007622.1 1751872 1752294 R hypothetical protein complement(1751872..1752294) Staphylococcus aureus RF122 3795041 YP_417083.1 CDS SAB1613c NC_007622.1 1752311 1753006 R 16S RNA pseudouridylate synthase complement(1752311..1753006) Staphylococcus aureus RF122 3793190 YP_417084.1 CDS SAB1614c NC_007622.1 1753003 1754664 R polysaccharide transporter complement(1753003..1754664) Staphylococcus aureus RF122 3793191 YP_417085.1 CDS SAB1615 NC_007622.1 1755071 1756339 D hypothetical protein 1755071..1756339 Staphylococcus aureus RF122 3793192 YP_417086.1 CDS SAB1617c NC_007622.1 1762651 1762962 R hypothetical protein complement(1762651..1762962) Staphylococcus aureus RF122 3793194 YP_417087.1 CDS leuS NC_007622.1 1762984 1765398 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1762984..1765398) Staphylococcus aureus RF122 3794808 YP_417088.1 CDS SAB1619c NC_007622.1 1765690 1766871 R multidrug resistance protein B complement(1765690..1766871) Staphylococcus aureus RF122 3793195 YP_417089.1 CDS SAB1620 NC_007622.1 1766981 1767934 D hypothetical protein 1766981..1767934 Staphylococcus aureus RF122 3793196 YP_417090.1 CDS SAB1621 NC_007622.1 1767931 1768494 D hypothetical protein 1767931..1768494 Staphylococcus aureus RF122 3793197 YP_417091.1 CDS rot NC_007622.1 1768614 1769114 R repressor of toxins transcriptional regulator complement(1768614..1769114) Staphylococcus aureus RF122 3793106 YP_417092.1 CDS SAB1623c NC_007622.1 1769587 1770414 R hypothetical protein complement(1769587..1770414) Staphylococcus aureus RF122 3793198 YP_417093.1 CDS SAB1624 NC_007622.1 1770648 1771649 D proline oxidase 1770648..1771649 Staphylococcus aureus RF122 3793199 YP_417094.1 CDS ribH NC_007622.1 1771771 1772235 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(1771771..1772235) Staphylococcus aureus RF122 3793096 YP_417095.1 CDS ribA NC_007622.1 1772248 1773429 R riboflavin biosynthesis protein complement(1772248..1773429) Staphylococcus aureus RF122 3794279 YP_417096.1 CDS ribE NC_007622.1 1773440 1774072 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(1773440..1774072) Staphylococcus aureus RF122 3793095 YP_417097.1 CDS ribD NC_007622.1 1774079 1775122 R riboflavin specific deaminase complement(1774079..1775122) Staphylococcus aureus RF122 3793094 YP_417098.1 CDS SAB1629c NC_007622.1 1775603 1777105 R hypothetical protein complement(1775603..1777105) Staphylococcus aureus RF122 3793200 YP_417099.1 CDS arsR NC_007622.1 1777627 1777941 D arsenical resistance operon repressor 1777627..1777941 Staphylococcus aureus RF122 3794956 YP_417100.1 CDS arsB NC_007622.1 1777941 1779233 D arsenic efflux pump protein 1777941..1779233 Staphylococcus aureus RF122 3794955 YP_417101.1 CDS SAB1632 NC_007622.1 1779251 1779646 D catalyzes the reduction of arsenate to arsenite; also can dephosphorylate tyrosine phosphorylated proteins, aryl phosphates, and acyl phosphates; arsenate reductase 1779251..1779646 Staphylococcus aureus RF122 3793201 YP_417102.1 CDS SAB1633c NC_007622.1 1780047 1780901 R hypothetical protein complement(1780047..1780901) Staphylococcus aureus RF122 3793202 YP_417103.1 CDS SAB1634c NC_007622.1 1781177 1781401 R hypothetical protein complement(1781177..1781401) Staphylococcus aureus RF122 3793203 YP_417104.1 CDS SAB1635 NC_007622.1 1781585 1782070 D DNA-binding protein 1781585..1782070 Staphylococcus aureus RF122 3793204 YP_417105.1 CDS SAB1636 NC_007622.1 1782183 1782626 D hypothetical protein 1782183..1782626 Staphylococcus aureus RF122 3793205 YP_417106.1 CDS SAB1637c NC_007622.1 1782613 1783056 R hypothetical protein complement(1782613..1783056) Staphylococcus aureus RF122 3793206 YP_417107.1 CDS SAB1639c NC_007622.1 1784413 1785126 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(1784413..1785126) Staphylococcus aureus RF122 3793208 YP_417108.1 CDS SAB1640 NC_007622.1 1785384 1785686 D hypothetical protein 1785384..1785686 Staphylococcus aureus RF122 3794594 YP_417109.1 CDS SAB1641 NC_007622.1 1785864 1786307 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1785864..1786307 Staphylococcus aureus RF122 3794595 YP_417110.1 CDS SAB1642 NC_007622.1 1786304 1786657 D hypothetical protein 1786304..1786657 Staphylococcus aureus RF122 3794596 YP_417111.1 CDS SAB1643c NC_007622.1 1786906 1787739 R aldo-keto reductase family protein complement(1786906..1787739) Staphylococcus aureus RF122 3794597 YP_417112.1 CDS SAB1644c NC_007622.1 1787950 1788858 R hypothetical protein complement(1787950..1788858) Staphylococcus aureus RF122 3794598 YP_417113.2 CDS SAB1645c NC_007622.1 1788983 1790176 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1788983..1790176) Staphylococcus aureus RF122 3794599 YP_417114.1 CDS pckA NC_007622.1 1790547 1792139 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1790547..1792139 Staphylococcus aureus RF122 3794122 YP_417115.1 CDS SAB1647c NC_007622.1 1792436 1793206 R hypothetical protein complement(1792436..1793206) Staphylococcus aureus RF122 3794600 YP_417116.1 CDS SAB1648c NC_007622.1 1793187 1793720 R hypothetical protein complement(1793187..1793720) Staphylococcus aureus RF122 3794601 YP_417117.1 CDS SAB1649 NC_007622.1 1793726 1793983 D hypothetical protein 1793726..1793983 Staphylococcus aureus RF122 3794602 YP_417118.1 CDS SAB1650c NC_007622.1 1793980 1794981 R o-succinylbenzoic acid synthetase complement(1793980..1794981) Staphylococcus aureus RF122 3794603 YP_417119.1 CDS SAB1651c NC_007622.1 1794986 1796464 R O-succinylbenzoate-CoA ligase complement(1794986..1796464) Staphylococcus aureus RF122 3794604 YP_417120.1 CDS SAB1653 NC_007622.1 1797416 1798030 D hypothetical protein 1797416..1798030 Staphylococcus aureus RF122 3794606 YP_417121.1 CDS SAB1654 NC_007622.1 1798111 1799106 D hypothetical protein 1798111..1799106 Staphylococcus aureus RF122 3794607 YP_417122.1 CDS SAB1655 NC_007622.1 1799182 1799808 D lipoprotein 1799182..1799808 Staphylococcus aureus RF122 3794608 YP_417123.1 CDS SAB1656 NC_007622.1 1799849 1800190 D hypothetical protein 1799849..1800190 Staphylococcus aureus RF122 3794609 YP_417124.1 CDS SAB1657 NC_007622.1 1800291 1800863 D hypothetical protein 1800291..1800863 Staphylococcus aureus RF122 3794610 YP_417125.1 CDS SAB1658c NC_007622.1 1801196 1801639 R hypothetical protein complement(1801196..1801639) Staphylococcus aureus RF122 3794611 YP_417126.1 CDS SAB1659c NC_007622.1 1801639 1802088 R hypothetical protein complement(1801639..1802088) Staphylococcus aureus RF122 3794612 YP_417127.1 CDS SAB1660c NC_007622.1 1802088 1802282 R hypothetical protein complement(1802088..1802282) Staphylococcus aureus RF122 3794613 YP_417128.1 CDS SAB1661c NC_007622.1 1802279 1802530 R hypothetical protein complement(1802279..1802530) Staphylococcus aureus RF122 3795102 YP_417129.1 CDS SAB1662c NC_007622.1 1802530 1802973 R hypothetical protein complement(1802530..1802973) Staphylococcus aureus RF122 3795103 YP_417130.1 CDS hysA1 NC_007622.1 1803492 1805915 D hyaluronate lyase precursor 1803492..1805915 Staphylococcus aureus RF122 3794099 YP_417131.1 CDS SAB1664c NC_007622.1 1806041 1806418 R hypothetical protein complement(1806041..1806418) Staphylococcus aureus RF122 3795104 YP_417132.1 CDS hsdM NC_007622.1 1813003 1814559 R type I restriction-modification system M subunit complement(1813003..1814559) Staphylococcus aureus RF122 3794090 YP_417133.1 CDS splF NC_007622.1 1814922 1815641 R serine proteinase complement(1814922..1815641) Staphylococcus aureus RF122 3793006 YP_417134.1 CDS splE NC_007622.1 1815810 1816550 R serine proteinase complement(1815810..1816550) Staphylococcus aureus RF122 3793005 YP_417135.1 CDS splC NC_007622.1 1816651 1817370 R serine proteinase complement(1816651..1817370) Staphylococcus aureus RF122 3793004 YP_417136.1 CDS SAB1672c NC_007622.1 1817428 1818150 R serine proteinase complement(1817428..1818150) Staphylococcus aureus RF122 3795108 YP_417138.1 CDS SAB1675 NC_007622.1 1819934 1820512 D hypothetical protein 1819934..1820512 Staphylococcus aureus RF122 3795111 YP_417139.1 CDS SAB1676c NC_007622.1 1820986 1821684 R hypothetical protein complement(1820986..1821684) Staphylococcus aureus RF122 3795112 YP_417140.1 CDS SAB1677c NC_007622.1 1821681 1822442 R transport protein complement(1821681..1822442) Staphylococcus aureus RF122 3795113 YP_417141.1 CDS SAB1678c NC_007622.1 1822439 1823131 R transport protein complement(1822439..1823131) Staphylococcus aureus RF122 3795114 YP_417142.1 CDS SAB1679c NC_007622.1 1823154 1824527 R serine protease precursor complement(1823154..1824527) Staphylococcus aureus RF122 3795115 YP_417143.1 CDS SAB1680c NC_007622.1 1824537 1825055 R hypothetical protein complement(1824537..1825055) Staphylococcus aureus RF122 3795116 YP_417144.1 CDS SAB1681c NC_007622.1 1825071 1826315 R hypothetical protein complement(1825071..1826315) Staphylococcus aureus RF122 3795117 YP_417145.1 CDS SAB1682c NC_007622.1 1826308 1829301 R hypothetical protein complement(1826308..1829301) Staphylococcus aureus RF122 3795118 YP_417146.1 CDS SAB1683c NC_007622.1 1829366 1829509 R hypothetical protein complement(1829366..1829509) Staphylococcus aureus RF122 3795119 YP_417147.1 CDS SAB1684 NC_007622.1 1829951 1830142 D hypothetical protein 1829951..1830142 Staphylococcus aureus RF122 3795120 YP_417148.1 CDS SAB1685c NC_007622.1 1830243 1830386 R hypothetical protein complement(1830243..1830386) Staphylococcus aureus RF122 3793718 YP_417149.1 CDS lukD NC_007622.1 1830626 1831609 R leukotoxin D subunit complement(1830626..1831609) Staphylococcus aureus RF122 3794758 YP_417150.1 CDS lukE NC_007622.1 1831611 1832546 R leukotoxin E subunit complement(1831611..1832546) Staphylococcus aureus RF122 3794759 YP_417151.1 CDS SAB1688 NC_007622.1 1833270 1833383 D hypothetical protein 1833270..1833383 Staphylococcus aureus RF122 3793719 YP_417152.1 CDS SAB1689c NC_007622.1 1833727 1833870 R hypothetical protein complement(1833727..1833870) Staphylococcus aureus RF122 3793720 YP_417153.1 CDS SAB1690 NC_007622.1 1834173 1834769 D hypothetical protein 1834173..1834769 Staphylococcus aureus RF122 3793721 YP_417154.1 CDS SAB1691 NC_007622.1 1834937 1836283 D hypothetical protein 1834937..1836283 Staphylococcus aureus RF122 3793722 YP_417155.1 CDS SAB1692 NC_007622.1 1836565 1836771 D hypothetical protein 1836565..1836771 Staphylococcus aureus RF122 3793723 YP_417156.1 CDS SAB1693 NC_007622.1 1836869 1837105 D hypothetical protein 1836869..1837105 Staphylococcus aureus RF122 3793724 YP_417157.1 CDS SAB1694 NC_007622.1 1837147 1837902 D hypothetical protein 1837147..1837902 Staphylococcus aureus RF122 3793725 YP_417158.1 CDS SAB1695 NC_007622.1 1838050 1838211 D hypothetical protein 1838050..1838211 Staphylococcus aureus RF122 3793726 YP_417159.1 CDS seg NC_007622.1 1838630 1839247 R enterotoxin G complement(1838630..1839247) Staphylococcus aureus RF122 3794615 YP_417160.1 CDS sen NC_007622.1 1839538 1840293 R enterotoxin N complement(1839538..1840293) Staphylococcus aureus RF122 3794619 YP_417161.1 CDS sec-variant NC_007622.1 1840332 1841117 R enterotoxin type C variant complement(1840332..1841117) Staphylococcus aureus RF122 3793186 YP_417162.1 CDS sei NC_007622.1 1841271 1841999 R enterotoxin I complement(1841271..1841999) Staphylococcus aureus RF122 3794616 YP_417163.1 CDS seo NC_007622.1 1843037 1843801 R enterotoxin O complement(1843037..1843801) Staphylococcus aureus RF122 3794620 YP_417164.1 CDS SAB1702c NC_007622.1 1844600 1844854 R hypothetical protein complement(1844600..1844854) Staphylococcus aureus RF122 3793727 YP_417165.1 CDS SAB1703c NC_007622.1 1844930 1846375 R phage-related amidase complement(1844930..1846375) Staphylococcus aureus RF122 3793728 YP_417166.1 CDS SAB1704c NC_007622.1 1846356 1846793 R phage-related holin complement(1846356..1846793) Staphylococcus aureus RF122 3793729 YP_417167.1 CDS SAB1705c NC_007622.1 1846844 1848856 R phage-related tail fiber complement(1846844..1848856) Staphylococcus aureus RF122 3793730 YP_417168.1 CDS SAB1706c NC_007622.1 1848869 1850773 R phage-related cell wall hydrolase complement(1848869..1850773) Staphylococcus aureus RF122 3793731 YP_417169.1 CDS SAB1707c NC_007622.1 1850910 1851215 R phage-like protein complement(1850910..1851215) Staphylococcus aureus RF122 3793732 YP_417170.1 CDS SAB1708c NC_007622.1 1851403 1851810 R phage-like protein complement(1851403..1851810) Staphylococcus aureus RF122 3793733 YP_417171.1 CDS SAB1709c NC_007622.1 1851810 1853633 R phage-like protein complement(1851810..1853633) Staphylococcus aureus RF122 3793734 YP_417172.1 CDS SAB1710c NC_007622.1 1853633 1855543 R phage-like protein complement(1853633..1855543) Staphylococcus aureus RF122 3793735 YP_417173.1 CDS SAB1711c NC_007622.1 1855558 1857459 R phage-like protein complement(1855558..1857459) Staphylococcus aureus RF122 3793736 YP_417174.1 CDS SAB1712c NC_007622.1 1857468 1858415 R phage-like protein complement(1857468..1858415) Staphylococcus aureus RF122 3793737 YP_417175.1 CDS SAB1713c NC_007622.1 1858428 1861892 R phage-like protein complement(1858428..1861892) Staphylococcus aureus RF122 3795178 YP_417176.1 CDS SAB1714c NC_007622.1 1861909 1862253 R phage-like protein complement(1861909..1862253) Staphylococcus aureus RF122 3795179 YP_417177.1 CDS SAB1715c NC_007622.1 1862283 1862648 R phage-like protein complement(1862283..1862648) Staphylococcus aureus RF122 3795180 YP_417178.1 CDS SAB1716c NC_007622.1 1862710 1863291 R phage-like protein complement(1862710..1863291) Staphylococcus aureus RF122 3795181 YP_417179.1 CDS SAB1717c NC_007622.1 1863309 1863692 R phage-like protein complement(1863309..1863692) Staphylococcus aureus RF122 3795182 YP_417180.1 CDS SAB1718c NC_007622.1 1863704 1864051 R phage-like protein complement(1863704..1864051) Staphylococcus aureus RF122 3795183 YP_417181.1 CDS SAB1719c NC_007622.1 1864051 1864353 R phage-like protein complement(1864051..1864353) Staphylococcus aureus RF122 3795184 YP_417182.1 CDS SAB1720c NC_007622.1 1864350 1864682 R phage-like protein complement(1864350..1864682) Staphylococcus aureus RF122 3795185 YP_417183.1 CDS SAB1721c NC_007622.1 1864691 1864978 R phage-like protein complement(1864691..1864978) Staphylococcus aureus RF122 3795186 YP_417184.1 CDS SAB1722c NC_007622.1 1865000 1865974 R phage-related head protein complement(1865000..1865974) Staphylococcus aureus RF122 3795187 YP_417185.1 CDS SAB1723c NC_007622.1 1865988 1866602 R phage-like protein complement(1865988..1866602) Staphylococcus aureus RF122 3795188 YP_417186.1 CDS SAB1724c NC_007622.1 1866980 1867912 R phage-like protein complement(1866980..1867912) Staphylococcus aureus RF122 3795189 YP_417187.1 CDS SAB1725c NC_007622.1 1867976 1869517 R phage-like protein complement(1867976..1869517) Staphylococcus aureus RF122 3795190 YP_417188.1 CDS SAB1726c NC_007622.1 1869528 1870817 R phage-associated terminase large subunit complement(1869528..1870817) Staphylococcus aureus RF122 3795191 YP_417189.1 CDS SAB1727c NC_007622.1 1870820 1871329 R mobile-element-associated protein complement(1870820..1871329) Staphylococcus aureus RF122 3795192 YP_417190.1 CDS SAB1728c NC_007622.1 1871502 1871921 R mobile-element-associated regulatory protein complement(1871502..1871921) Staphylococcus aureus RF122 3795193 YP_417191.1 CDS rinB NC_007622.1 1872083 1872256 R int gene transcriptional activator complement(1872083..1872256) Staphylococcus aureus RF122 3793098 YP_417192.1 CDS SAB1730c NC_007622.1 1872253 1872459 R phage-like protein complement(1872253..1872459) Staphylococcus aureus RF122 3795194 YP_417193.1 CDS SAB1731c NC_007622.1 1872456 1872701 R phage-like protein complement(1872456..1872701) Staphylococcus aureus RF122 3795195 YP_417194.1 CDS SAB1732c NC_007622.1 1872738 1873274 R phage-like protein complement(1872738..1873274) Staphylococcus aureus RF122 3795196 YP_417195.1 CDS SAB1733c NC_007622.1 1873422 1873676 R phage-like protein complement(1873422..1873676) Staphylococcus aureus RF122 3793407 YP_417196.1 CDS SAB1734c NC_007622.1 1873736 1873972 R phage-like protein complement(1873736..1873972) Staphylococcus aureus RF122 3793408 YP_417197.1 CDS SAB1735c NC_007622.1 1873981 1874229 R phage-like protein complement(1873981..1874229) Staphylococcus aureus RF122 3793409 YP_417198.1 CDS SAB1736c NC_007622.1 1874229 1874483 R phage-like protein complement(1874229..1874483) Staphylococcus aureus RF122 3793410 YP_417199.1 CDS SAB1737c NC_007622.1 1874483 1874845 R phage-like protein complement(1874483..1874845) Staphylococcus aureus RF122 3793411 YP_417200.1 CDS SAB1738c NC_007622.1 1875036 1875440 R phage-like protein complement(1875036..1875440) Staphylococcus aureus RF122 3793412 YP_417201.1 CDS SAB1739c NC_007622.1 1875451 1875672 R phage-like protein complement(1875451..1875672) Staphylococcus aureus RF122 3793413 YP_417202.1 CDS SAB1740c NC_007622.1 1875675 1875890 R hypothetical protein complement(1875675..1875890) Staphylococcus aureus RF122 3793414 YP_417203.1 CDS dnaB NC_007622.1 1875887 1877128 R replicative DNA helicase complement(1875887..1877128) Staphylococcus aureus RF122 3794490 YP_417204.1 CDS SAB1742c NC_007622.1 1877125 1877481 R hypothetical protein complement(1877125..1877481) Staphylococcus aureus RF122 3793415 YP_417205.1 CDS SAB1743c NC_007622.1 1877481 1878236 R phage-like protein complement(1877481..1878236) Staphylococcus aureus RF122 3793416 YP_417206.1 CDS SAB1744c NC_007622.1 1878233 1878904 R phage-like protein complement(1878233..1878904) Staphylococcus aureus RF122 3793417 YP_417207.1 CDS SAB1745c NC_007622.1 1878918 1879343 R single strand DNA binding protein complement(1878918..1879343) Staphylococcus aureus RF122 3793418 YP_417208.1 CDS SAB1746c NC_007622.1 1879346 1879966 R phage-like protein complement(1879346..1879966) Staphylococcus aureus RF122 3793419 YP_417209.1 CDS SAB1747c NC_007622.1 1879959 1880180 R phage-like protein complement(1879959..1880180) Staphylococcus aureus RF122 3793420 YP_417210.1 CDS SAB1748c NC_007622.1 1880190 1880450 R phage-like protein complement(1880190..1880450) Staphylococcus aureus RF122 3793421 YP_417211.1 CDS SAB1749c NC_007622.1 1880455 1880757 R phage-like protein complement(1880455..1880757) Staphylococcus aureus RF122 3793422 YP_417212.1 CDS SAB1750c NC_007622.1 1880822 1881136 R hypothetical protein complement(1880822..1881136) Staphylococcus aureus RF122 3793423 YP_417213.1 CDS SAB1751c NC_007622.1 1881141 1881311 R hypothetical protein complement(1881141..1881311) Staphylococcus aureus RF122 3793424 YP_417214.1 CDS SAB1752c NC_007622.1 1881326 1881541 R hypothetical protein complement(1881326..1881541) Staphylococcus aureus RF122 3793425 YP_417215.1 CDS SAB1753c NC_007622.1 1881557 1882306 R phage anti-repressor protein complement(1881557..1882306) Staphylococcus aureus RF122 3793426 YP_417216.1 CDS SAB1754 NC_007622.1 1882363 1882953 D phage-like protein 1882363..1882953 Staphylococcus aureus RF122 3792803 YP_417217.1 CDS SAB1755c NC_007622.1 1883134 1883922 R phage anti-repressor protein complement(1883134..1883922) Staphylococcus aureus RF122 3792804 YP_417218.1 CDS SAB1756c NC_007622.1 1883938 1884153 R phage-like protein complement(1883938..1884153) Staphylococcus aureus RF122 3792805 YP_417219.1 CDS SAB1757 NC_007622.1 1884309 1884977 D transcriptional repressor 1884309..1884977 Staphylococcus aureus RF122 3792806 YP_417220.1 CDS SAB1758 NC_007622.1 1885034 1885534 D hypothetical protein 1885034..1885534 Staphylococcus aureus RF122 3792807 YP_417221.1 CDS SAB1759 NC_007622.1 1885538 1886053 D hypothetical protein 1885538..1886053 Staphylococcus aureus RF122 3792808 YP_417222.1 CDS SAB1760 NC_007622.1 1886112 1887176 D integrase 1886112..1887176 Staphylococcus aureus RF122 3792809 YP_417224.1 CDS SAB1762c NC_007622.1 1888575 1889129 R hypothetical protein complement(1888575..1889129) Staphylococcus aureus RF122 3792811 YP_417225.1 CDS hemY NC_007622.1 1889449 1890849 R catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase complement(1889449..1890849) Staphylococcus aureus RF122 3794912 YP_417226.1 CDS hemH NC_007622.1 1890873 1891796 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(1890873..1891796) Staphylococcus aureus RF122 3794910 YP_417227.1 CDS hemE NC_007622.1 1891854 1892891 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(1891854..1892891) Staphylococcus aureus RF122 3794909 YP_417228.1 CDS traP NC_007622.1 1893152 1893655 D signal transduction protein 1893152..1893655 Staphylococcus aureus RF122 3794334 YP_417229.1 CDS SAB1767c NC_007622.1 1893779 1895002 R ABC transporter complement(1893779..1895002) Staphylococcus aureus RF122 3792812 YP_417230.1 CDS SAB1768c NC_007622.1 1894995 1895735 R ABC transporter ATP-binding protein complement(1894995..1895735) Staphylococcus aureus RF122 3792813 YP_417231.1 CDS SAB1769 NC_007622.1 1895869 1896291 D cell cycle regulation protein 1895869..1896291 Staphylococcus aureus RF122 3792814 YP_417232.1 CDS SAB1770 NC_007622.1 1896433 1896798 D hypothetical protein 1896433..1896798 Staphylococcus aureus RF122 3792815 YP_417233.1 CDS SAB1771 NC_007622.1 1896776 1896982 D hypothetical protein 1896776..1896982 Staphylococcus aureus RF122 3792816 YP_417234.1 CDS SAB1772 NC_007622.1 1897321 1897470 D hypothetical protein 1897321..1897470 Staphylococcus aureus RF122 3792817 YP_417235.1 CDS SAB1773 NC_007622.1 1897531 1898088 D hypothetical protein 1897531..1898088 Staphylococcus aureus RF122 3792818 YP_417236.1 CDS SAB1774 NC_007622.1 1898293 1899255 D peptidyl-prolyl cis-isomerase 1898293..1899255 Staphylococcus aureus RF122 3792819 YP_417237.1 CDS SAB1775c NC_007622.1 1899376 1900317 R catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease YhaM complement(1899376..1900317) Staphylococcus aureus RF122 3792820 YP_417238.1 CDS SAB1776c NC_007622.1 1900314 1903250 R hypothetical protein complement(1900314..1903250) Staphylococcus aureus RF122 3792821 YP_417239.1 CDS SAB1777c NC_007622.1 1903240 1904436 R hypothetical protein complement(1903240..1904436) Staphylococcus aureus RF122 3793504 YP_417240.1 CDS SAB1778c NC_007622.1 1905520 1905864 R hypothetical protein complement(1905520..1905864) Staphylococcus aureus RF122 3793505 YP_417241.1 CDS SAB1779c NC_007622.1 1905933 1907057 R hypothetical protein complement(1905933..1907057) Staphylococcus aureus RF122 3793506 YP_417242.1 CDS SAB1780c NC_007622.1 1907236 1907700 R DNA-binding protein complement(1907236..1907700) Staphylococcus aureus RF122 3793507 YP_417243.1 CDS SAB1781c NC_007622.1 1908056 1908679 R two-component response regulator protein complement(1908056..1908679) Staphylococcus aureus RF122 3793508 YP_417244.1 CDS SAB1782c NC_007622.1 1908701 1909813 R two-component response system sensor histidine kinase complement(1908701..1909813) Staphylococcus aureus RF122 3793509 YP_417245.1 CDS SAB1783 NC_007622.1 1909976 1910797 D RNA pseudouridylate synthase 1909976..1910797 Staphylococcus aureus RF122 3793510 YP_417246.1 CDS fumC NC_007622.1 1911248 1912633 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(1911248..1912633) Staphylococcus aureus RF122 3794417 YP_417247.1 CDS SAB1785c NC_007622.1 1912829 1913251 R hypothetical protein complement(1912829..1913251) Staphylococcus aureus RF122 3793511 YP_417248.1 CDS SAB1786 NC_007622.1 1913343 1913645 D hypothetical protein 1913343..1913645 Staphylococcus aureus RF122 3793512 YP_417249.2 CDS SAB1787c NC_007622.1 1913710 1913862 R hypothetical protein complement(1913710..1913862) Staphylococcus aureus RF122 3793513 YP_417250.1 CDS SAB1788c NC_007622.1 1913887 1914486 R hypothetical protein complement(1913887..1914486) Staphylococcus aureus RF122 3793514 YP_417251.1 CDS SAB1789c NC_007622.1 1914645 1915115 R rRNA methylase-like protein complement(1914645..1915115) Staphylococcus aureus RF122 3793515 YP_417252.1 CDS SAB1790c NC_007622.1 1915120 1916247 R iron-sulfur binding protein complement(1915120..1916247) Staphylococcus aureus RF122 3793516 YP_417253.1 CDS glnQ NC_007622.1 1916398 1917126 R glutamate ATP-binding ABC transporter complement(1916398..1917126) Staphylococcus aureus RF122 3793648 YP_417254.1 CDS SAB1792c NC_007622.1 1917113 1918570 R substrate-binding glutamine ABC transporter complement(1917113..1918570) Staphylococcus aureus RF122 3793517 YP_417255.1 CDS SAB1793c NC_007622.1 1918829 1919890 R hypothetical protein complement(1918829..1919890) Staphylococcus aureus RF122 3793518 YP_417256.1 CDS perR NC_007622.1 1928745 1929191 R peroxide operon regulator complement(1928745..1929191) Staphylococcus aureus RF122 3794464 YP_417257.1 CDS SAB1795c NC_007622.1 1929288 1930238 R hypothetical protein complement(1929288..1930238) Staphylococcus aureus RF122 3793519 YP_417258.1 CDS SAB1796c NC_007622.1 1930244 1930699 R bacterioferritin comigratory protein complement(1930244..1930699) Staphylococcus aureus RF122 3793520 YP_417259.1 CDS SAB1797 NC_007622.1 1930780 1932069 D converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 1930780..1932069 Staphylococcus aureus RF122 3793521 YP_417260.1 CDS SAB1798 NC_007622.1 1932362 1933456 D hypothetical protein 1932362..1933456 Staphylococcus aureus RF122 3793522 YP_417261.1 CDS SAB1799c NC_007622.1 1933647 1935383 R ATP-binding ABC transporter complement(1933647..1935383) Staphylococcus aureus RF122 3793523 YP_417262.1 CDS SAB1800c NC_007622.1 1935673 1936215 R hypothetical protein complement(1935673..1936215) Staphylococcus aureus RF122 3794203 YP_417263.1 CDS SAB1801c NC_007622.1 1936518 1937555 R A/G-specific adenine glycosylase DNA repair protein complement(1936518..1937555) Staphylococcus aureus RF122 3794204 YP_417264.1 CDS SAB1802 NC_007622.1 1937707 1938684 D hypothetical protein 1937707..1938684 Staphylococcus aureus RF122 3794205 YP_417265.1 CDS SAB1803c NC_007622.1 1938945 1939781 R hypothetical protein complement(1938945..1939781) Staphylococcus aureus RF122 3794206 YP_417266.1 CDS SAB1804c NC_007622.1 1939790 1941307 R hypothetical protein complement(1939790..1941307) Staphylococcus aureus RF122 3794207 YP_417267.1 CDS recX NC_007622.1 1941615 1942433 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(1941615..1942433) Staphylococcus aureus RF122 3794208 YP_417268.1 CDS SAB1806c NC_007622.1 1942694 1943503 R monofunctional; catalyzes the elongation of glycan strands in cell wall biosynthesis; glycosyltransferase complement(1942694..1943503) Staphylococcus aureus RF122 3794209 YP_417269.1 CDS SAB1807c NC_007622.1 1943843 1944358 R hypothetical protein complement(1943843..1944358) Staphylococcus aureus RF122 3794210 YP_417270.1 CDS SAB1808c NC_007622.1 1944488 1944649 R hypothetical protein complement(1944488..1944649) Staphylococcus aureus RF122 3794211 YP_417271.1 CDS SAB1809 NC_007622.1 1944872 1946023 D hypothetical protein 1944872..1946023 Staphylococcus aureus RF122 3794212 YP_417272.1 CDS SAB1810c NC_007622.1 1946284 1946814 R hypothetical protein complement(1946284..1946814) Staphylococcus aureus RF122 3794213 YP_417273.1 CDS SAB1811c NC_007622.1 1946904 1948151 R aminopeptidase complement(1946904..1948151) Staphylococcus aureus RF122 3794214 YP_417274.1 CDS SAB1812c NC_007622.1 1948163 1948363 R hypothetical protein complement(1948163..1948363) Staphylococcus aureus RF122 3794215 YP_417275.1 CDS SAB1813 NC_007622.1 1948510 1948974 D protein tyrosine phosphatase 1948510..1948974 Staphylococcus aureus RF122 3794216 YP_417276.1 CDS SAB1814 NC_007622.1 1948981 1949256 D hypothetical protein 1948981..1949256 Staphylococcus aureus RF122 3794217 YP_417277.1 CDS SAB1815 NC_007622.1 1949534 1950751 D hypothetical protein 1949534..1950751 Staphylococcus aureus RF122 3794218 YP_417278.1 CDS SAB1816c NC_007622.1 1950864 1951493 R two-component response regulator complement(1950864..1951493) Staphylococcus aureus RF122 3794219 YP_417279.1 CDS vraS NC_007622.1 1951483 1952526 R two-component sensor histidine kinase complement(1951483..1952526) Staphylococcus aureus RF122 3794175 YP_417280.1 CDS SAB1818c NC_007622.1 1952523 1953224 R hypothetical protein complement(1952523..1953224) Staphylococcus aureus RF122 3794034 YP_417281.1 CDS SAB1819c NC_007622.1 1953239 1953625 R hypothetical protein complement(1953239..1953625) Staphylococcus aureus RF122 3794220 YP_417282.1 CDS SAB1820c NC_007622.1 1953842 1954600 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1953842..1954600) Staphylococcus aureus RF122 3794221 YP_417283.1 CDS SAB1821 NC_007622.1 1955012 1955998 D hypothetical protein 1955012..1955998 Staphylococcus aureus RF122 3793016 YP_417284.1 CDS SAB1822c NC_007622.1 1956428 1956841 R hypothetical protein complement(1956428..1956841) Staphylococcus aureus RF122 3793017 YP_417285.1 CDS SAB1823c NC_007622.1 1957066 1957797 R cobyric acid synthase complement(1957066..1957797) Staphylococcus aureus RF122 3793018 YP_417286.1 CDS SAB1824c NC_007622.1 1957799 1959112 R UDP-N-acetylmuramyl tripeptide synthase complement(1957799..1959112) Staphylococcus aureus RF122 3793019 YP_417287.1 CDS ftn NC_007622.1 1959407 1959907 D ferritin 1959407..1959907 Staphylococcus aureus RF122 3794343 YP_417288.1 CDS SAB1826 NC_007622.1 1960298 1960852 D DNA polymerase III alpha chain 1960298..1960852 Staphylococcus aureus RF122 3793020 YP_417289.1 CDS SAB1827c NC_007622.1 1961004 1961990 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(1961004..1961990) Staphylococcus aureus RF122 3793021 YP_417290.1 CDS SAB1828c NC_007622.1 1962237 1962767 R hypothetical protein complement(1962237..1962767) Staphylococcus aureus RF122 3794035 YP_417291.1 CDS SAB1829c NC_007622.1 1962937 1964298 R RNA methyltransferase complement(1962937..1964298) Staphylococcus aureus RF122 3793022 YP_417292.1 CDS SAB1830c NC_007622.1 1964379 1965326 R similar to YegS from E. coli; lipid kinase complement(1964379..1965326) Staphylococcus aureus RF122 3793023 YP_417293.1 CDS SAB1831c NC_007622.1 1965417 1965647 R hypothetical protein complement(1965417..1965647) Staphylococcus aureus RF122 3793024 YP_417294.1 CDS gatB NC_007622.1 1966094 1967521 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1966094..1967521) Staphylococcus aureus RF122 3794353 YP_417295.1 CDS gatA NC_007622.1 1967534 1968991 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1967534..1968991) Staphylococcus aureus RF122 3794352 YP_417296.1 CDS gatC NC_007622.1 1968993 1969295 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(1968993..1969295) Staphylococcus aureus RF122 3794354 YP_417297.1 CDS putP NC_007622.1 1969661 1971199 D high affinity proline permease 1969661..1971199 Staphylococcus aureus RF122 3794683 YP_417298.1 CDS SAB1836c NC_007622.1 1971358 1971711 R transcriptional regulator complement(1971358..1971711) Staphylococcus aureus RF122 3793025 YP_417299.1 CDS SAB1837 NC_007622.1 1971836 1972795 D hypothetical protein 1971836..1972795 Staphylococcus aureus RF122 3793026 YP_417300.1 CDS SAB1838c NC_007622.1 1973079 1974278 R lipoprotein complement(1973079..1974278) Staphylococcus aureus RF122 3793027 YP_417301.1 CDS lig NC_007622.1 1974291 1976294 R DNA ligase complement(1974291..1976294) Staphylococcus aureus RF122 3794751 YP_417302.1 CDS pcrA NC_007622.1 1976298 1978490 R ATP-dependent DNA helicase complement(1976298..1978490) Staphylococcus aureus RF122 3794124 YP_417303.1 CDS SAB1841c NC_007622.1 1978487 1979179 R PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase-like protein complement(1978487..1979179) Staphylococcus aureus RF122 3793028 YP_417304.1 CDS SAB1842c NC_007622.1 1979351 1979653 R hypothetical protein complement(1979351..1979653) Staphylococcus aureus RF122 3793029 YP_417305.1 CDS purB NC_007622.1 1979762 1981057 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(1979762..1981057) Staphylococcus aureus RF122 3794044 YP_417307.1 CDS SAB1845 NC_007622.1 1981918 1983084 D staphopain cysteine proteinase 1981918..1983084 Staphylococcus aureus RF122 3793031 YP_417308.1 CDS SAB1846 NC_007622.1 1983115 1983441 D hypothetical protein 1983115..1983441 Staphylococcus aureus RF122 3793032 YP_417309.1 CDS SAB1847c NC_007622.1 1983733 1983906 R hypothetical protein complement(1983733..1983906) Staphylococcus aureus RF122 3793033 YP_417310.1 CDS SAB1848c NC_007622.1 1983887 1984489 R hypothetical protein complement(1983887..1984489) Staphylococcus aureus RF122 3793034 YP_417311.1 CDS nadE NC_007622.1 1984759 1985580 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(1984759..1985580) Staphylococcus aureus RF122 3793035 YP_417312.1 CDS SAB1850c NC_007622.1 1985573 1987042 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1985573..1987042) Staphylococcus aureus RF122 3794634 YP_417313.1 CDS SAB1851 NC_007622.1 1987226 1988302 D nitric oxide synthase 1987226..1988302 Staphylococcus aureus RF122 3794635 YP_417314.1 CDS SAB1852 NC_007622.1 1988322 1989116 D hypothetical protein 1988322..1989116 Staphylococcus aureus RF122 3794636 YP_417315.1 CDS SAB1853c NC_007622.1 1989306 1990868 R sodium-sulfate symport protein complement(1989306..1990868) Staphylococcus aureus RF122 3794637 YP_417316.1 CDS SAB1854c NC_007622.1 1991074 1992171 R hypothetical protein complement(1991074..1992171) Staphylococcus aureus RF122 3794638 YP_417317.1 CDS SAB1855 NC_007622.1 1992543 1993103 D bifunctional pyrazinamidase/nicotinamidase 1992543..1993103 Staphylococcus aureus RF122 3794639 YP_417318.1 CDS ppaC NC_007622.1 1993156 1994085 D catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 1993156..1994085 Staphylococcus aureus RF122 3794029 YP_417319.1 CDS SAB1857 NC_007622.1 1994503 1995882 D aldehyde dehydrogenase 1994503..1995882 Staphylococcus aureus RF122 3794640 YP_417320.1 CDS SAB1858c NC_007622.1 1996002 1997030 R hypothetical protein complement(1996002..1997030) Staphylococcus aureus RF122 3794641 YP_417321.1 CDS SAB1859 NC_007622.1 1997301 1997702 D hypothetical protein 1997301..1997702 Staphylococcus aureus RF122 3794642 YP_417322.1 CDS SAB1860c NC_007622.1 1997759 1997932 R hypothetical protein complement(1997759..1997932) Staphylococcus aureus RF122 3794643 YP_417323.1 CDS SAB1861 NC_007622.1 1998383 1999423 D hypothetical protein 1998383..1999423 Staphylococcus aureus RF122 3794644 YP_417324.1 CDS SAB1862c NC_007622.1 1999480 2000322 R hypothetical protein complement(1999480..2000322) Staphylococcus aureus RF122 3794645 YP_417325.1 CDS SAB1863c NC_007622.1 2000319 2000876 R hypothetical protein complement(2000319..2000876) Staphylococcus aureus RF122 3794646 YP_417326.1 CDS SAB1864c NC_007622.1 2000936 2001460 R hypothetical protein complement(2000936..2001460) Staphylococcus aureus RF122 3794647 YP_417327.1 CDS SAB1865 NC_007622.1 2001581 2002144 D hypothetical protein 2001581..2002144 Staphylococcus aureus RF122 3794648 YP_417328.1 CDS SAB1866c NC_007622.1 2002210 2002950 R hypothetical protein complement(2002210..2002950) Staphylococcus aureus RF122 3794649 YP_417329.1 CDS SAB1867c NC_007622.1 2002950 2003822 R transport protein complement(2002950..2003822) Staphylococcus aureus RF122 3794650 YP_417330.1 CDS SAB1868c NC_007622.1 2003819 2004499 R hypothetical protein complement(2003819..2004499) Staphylococcus aureus RF122 3794651 YP_417331.1 CDS SAB1869c NC_007622.1 2004500 2005396 R ABC transporter complement(2004500..2005396) Staphylococcus aureus RF122 3794652 YP_417332.1 CDS SAB1870c NC_007622.1 2005393 2005773 R GntR family transcriptional regulator complement(2005393..2005773) Staphylococcus aureus RF122 3794006 YP_417333.1 CDS SAB1871c NC_007622.1 2006271 2006447 R hypothetical protein complement(2006271..2006447) Staphylococcus aureus RF122 3794007 YP_417334.1 CDS SAB1872 NC_007622.1 2006988 2008274 D hypothetical protein 2006988..2008274 Staphylococcus aureus RF122 3794008 YP_417335.1 CDS SAB1873c NC_007622.1 2008883 2009965 R cell surface protein complement(2008883..2009965) Staphylococcus aureus RF122 3794009 YP_417336.1 CDS SAB1874 NC_007622.1 2010354 2011346 D beta-hemolysin 2010354..2011346 Staphylococcus aureus RF122 3794010 YP_417337.1 CDS SAB1875c NC_007622.1 2011862 2012878 R leukocidin F subunit complement(2011862..2012878) Staphylococcus aureus RF122 3794011 YP_417338.1 CDS SAB1876c NC_007622.1 2012900 2013955 R leukocidin S subunit complement(2012900..2013955) Staphylococcus aureus RF122 3794012 YP_417339.1 CDS SAB1877 NC_007622.1 2014391 2015614 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2014391..2015614 Staphylococcus aureus RF122 3794013 YP_417340.1 CDS SAB1878c NC_007622.1 2016112 2016450 R hypothetical protein complement(2016112..2016450) Staphylococcus aureus RF122 3794014 YP_417341.1 CDS SAB1879c NC_007622.1 2016572 2016982 R hypothetical protein complement(2016572..2016982) Staphylococcus aureus RF122 3794015 YP_417342.1 CDS SAB1880c NC_007622.1 2016985 2018055 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(2016985..2018055) Staphylococcus aureus RF122 3794016 YP_417343.1 CDS SAB1881c NC_007622.1 2018495 2018689 R hypothetical protein complement(2018495..2018689) Staphylococcus aureus RF122 3794017 YP_417344.1 CDS SAB1882 NC_007622.1 2018763 2020070 D sodium transport protein 2018763..2020070 Staphylococcus aureus RF122 3794018 YP_417345.1 CDS SAB1883 NC_007622.1 2020407 2020628 D transposase 2020407..2020628 Staphylococcus aureus RF122 3794019 YP_417346.1 CDS SAB1884c NC_007622.1 2020648 2021274 R phage-like protein complement(2020648..2021274) Staphylococcus aureus RF122 3794020 YP_417347.1 CDS SAB1885c NC_007622.1 2021271 2021450 R hypothetical protein complement(2021271..2021450) Staphylococcus aureus RF122 3794021 YP_417348.1 CDS SAB1888c NC_007622.1 2023094 2023228 R hypothetical protein complement(2023094..2023228) Staphylococcus aureus RF122 3794024 YP_417349.1 CDS SAB1889c NC_007622.1 2023929 2024429 R hypothetical protein complement(2023929..2024429) Staphylococcus aureus RF122 3794025 YP_417350.1 CDS SAB1890 NC_007622.1 2024780 2024896 D hypothetical protein 2024780..2024896 Staphylococcus aureus RF122 3793036 YP_417351.1 CDS SAB1891 NC_007622.1 2025043 2025726 D hypothetical protein 2025043..2025726 Staphylococcus aureus RF122 3793037 YP_417352.1 CDS SAB1892c NC_007622.1 2025927 2027396 R multidrug resistance protein complement(2025927..2027396) Staphylococcus aureus RF122 3793038 YP_417353.1 CDS SAB1893c NC_007622.1 2027398 2027544 R hypothetical protein complement(2027398..2027544) Staphylococcus aureus RF122 3793039 YP_417354.1 CDS SAB1895c NC_007622.1 2028146 2028487 R mobile element-associated protein complement(2028146..2028487) Staphylococcus aureus RF122 3793041 YP_417355.1 CDS SAB1896c NC_007622.1 2028490 2029065 R mobile element-associated protein complement(2028490..2029065) Staphylococcus aureus RF122 3793042 YP_417356.1 CDS SAB1897c NC_007622.1 2029068 2029286 R mobile element-associated protein complement(2029068..2029286) Staphylococcus aureus RF122 3793043 YP_417357.1 CDS SAB1898c NC_007622.1 2029304 2029882 R mobile element-associated protein complement(2029304..2029882) Staphylococcus aureus RF122 3793044 YP_417358.1 CDS SAB1899c NC_007622.1 2029894 2030235 R mobile element-associated protein complement(2029894..2030235) Staphylococcus aureus RF122 3793045 YP_417359.1 CDS SAB1900c NC_007622.1 2030416 2030541 R hypothetical protein complement(2030416..2030541) Staphylococcus aureus RF122 3793046 YP_417360.1 CDS SAB1901c NC_007622.1 2030553 2030726 R hypothetical protein complement(2030553..2030726) Staphylococcus aureus RF122 3793047 YP_417361.1 CDS SAB1902c NC_007622.1 2030752 2031393 R mobile element-associated protein complement(2030752..2031393) Staphylococcus aureus RF122 3793048 YP_417362.1 CDS SAB1903c NC_007622.1 2031390 2031770 R mobile element-associated protein complement(2031390..2031770) Staphylococcus aureus RF122 3793049 YP_417363.1 CDS SAB1904c NC_007622.1 2032079 2033788 R mobile element-associated protein complement(2032079..2033788) Staphylococcus aureus RF122 3793050 YP_417364.1 CDS SAB1905c NC_007622.1 2033802 2034671 R mobile element-associated protein complement(2033802..2034671) Staphylococcus aureus RF122 3793051 YP_417365.1 CDS SAB1906c NC_007622.1 2034738 2035055 R mobile element-associated protein complement(2034738..2035055) Staphylococcus aureus RF122 3793052 YP_417366.1 CDS SAB1907c NC_007622.1 2035056 2035424 R hypothetical protein complement(2035056..2035424) Staphylococcus aureus RF122 3793053 YP_417367.1 CDS SAB1908c NC_007622.1 2035417 2035629 R mobile element-associated protein complement(2035417..2035629) Staphylococcus aureus RF122 3793054 YP_417368.1 CDS SAB1909c NC_007622.1 2035765 2036082 R hypothetical protein complement(2035765..2036082) Staphylococcus aureus RF122 3794379 YP_417369.1 CDS SAB1910c NC_007622.1 2036086 2036274 R SaPI1 Orf21 complement(2036086..2036274) Staphylococcus aureus RF122 3794380 YP_417370.1 CDS SAB1911 NC_007622.1 2036444 2037166 D SaPI1 Orf22 2036444..2037166 Staphylococcus aureus RF122 3794381 YP_417371.1 CDS SAB1912 NC_007622.1 2037180 2038352 D integrase 2037180..2038352 Staphylococcus aureus RF122 3794382 YP_417372.1 CDS groEL NC_007622.1 2038421 2040037 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(2038421..2040037) Staphylococcus aureus RF122 3794233 YP_417373.1 CDS groES NC_007622.1 2040113 2040397 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(2040113..2040397) Staphylococcus aureus RF122 3794234 YP_417374.1 CDS SAB1915 NC_007622.1 2040572 2041315 D hypothetical protein 2040572..2041315 Staphylococcus aureus RF122 3794383 YP_417375.1 CDS SAB1916c NC_007622.1 2041340 2042638 R membrane anchored Ser-Asp rich fibrinogen-binding protein complement(2041340..2042638) Staphylococcus aureus RF122 3794384 YP_417376.1 CDS SAB1917 NC_007622.1 2042835 2043461 D hypothetical protein 2042835..2043461 Staphylococcus aureus RF122 3794385 YP_417377.1 CDS SAB1918 NC_007622.1 2043598 2043795 D hypothetical protein 2043598..2043795 Staphylococcus aureus RF122 3794386 YP_417378.1 CDS SAB1919 NC_007622.1 2043839 2044624 D hypothetical protein 2043839..2044624 Staphylococcus aureus RF122 3794387 YP_417379.1 CDS agrB NC_007622.1 2045592 2046155 D accessory gene regulator B 2045592..2046155 Staphylococcus aureus RF122 3794889 YP_417380.1 CDS agrD NC_007622.1 2046158 2046301 D autoinducer peptide precursor 2046158..2046301 Staphylococcus aureus RF122 3794891 YP_417381.1 CDS agrC NC_007622.1 2046331 2047614 D accessory gene regulator C 2046331..2047614 Staphylococcus aureus RF122 3794890 YP_417382.1 CDS agrA NC_007622.1 2047633 2048349 D accessory gene regulator A 2047633..2048349 Staphylococcus aureus RF122 3794888 YP_417383.1 CDS SAB1924c NC_007622.1 2048716 2049675 R fructokinase complement(2048716..2049675) Staphylococcus aureus RF122 3794388 YP_417384.1 CDS scrB NC_007622.1 2049672 2051156 R sucrose-6-phosphate hydrolase complement(2049672..2051156) Staphylococcus aureus RF122 3793179 YP_417385.1 CDS scrR NC_007622.1 2051305 2052255 R sucrose operon repressor complement(2051305..2052255) Staphylococcus aureus RF122 3793180 YP_417386.1 CDS SAB1927c NC_007622.1 2052436 2053686 R ammonium transporter complement(2052436..2053686) Staphylococcus aureus RF122 3794389 YP_417387.1 CDS SAB1928c NC_007622.1 2053895 2054119 R hypothetical protein complement(2053895..2054119) Staphylococcus aureus RF122 3794390 YP_417388.1 CDS SAB1929c NC_007622.1 2054179 2055258 R hypothetical protein complement(2054179..2055258) Staphylococcus aureus RF122 3794391 YP_417389.1 CDS SAB1930c NC_007622.1 2055563 2056198 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(2055563..2056198) Staphylococcus aureus RF122 3794392 YP_417390.1 CDS SAB1931 NC_007622.1 2056451 2058379 D ATP-binding ABC transporter protein 2056451..2058379 Staphylococcus aureus RF122 3794393 YP_417391.1 CDS SAB1932 NC_007622.1 2058748 2060358 D hypothetical protein 2058748..2060358 Staphylococcus aureus RF122 3794394 YP_417392.1 CDS SAB1933 NC_007622.1 2060506 2060703 D hypothetical protein 2060506..2060703 Staphylococcus aureus RF122 3794395 YP_417393.1 CDS SAB1934c NC_007622.1 2060786 2061811 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(2060786..2061811) Staphylococcus aureus RF122 3794396 YP_417394.1 CDS SAB1935c NC_007622.1 2061804 2062268 R ribosomal-protein-alanine acetyltransferase complement(2061804..2062268) Staphylococcus aureus RF122 3794397 YP_417395.1 CDS SAB1936c NC_007622.1 2062241 2062903 R hypothetical protein complement(2062241..2062903) Staphylococcus aureus RF122 3794398 YP_417396.1 CDS SAB1937c NC_007622.1 2062884 2063345 R hypothetical protein complement(2062884..2063345) Staphylococcus aureus RF122 3792687 YP_417397.1 CDS SAB1938 NC_007622.1 2063851 2065539 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2063851..2065539 Staphylococcus aureus RF122 3792688 YP_417398.1 CDS ilvB NC_007622.1 2065567 2067336 D acetolactate synthase large subunit 2065567..2067336 Staphylococcus aureus RF122 3795259 YP_417399.1 CDS ilvH NC_007622.1 2067336 2067590 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, this subunit subunit is required for full activity and valine sensitivity; also known as acetolactate synthase small; acetolactate synthase 1 regulatory subunit 2067336..2067590 Staphylococcus aureus RF122 3795261 YP_417400.1 CDS ilvC NC_007622.1 2067727 2068731 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2067727..2068731 Staphylococcus aureus RF122 3795260 YP_417401.1 CDS leuA NC_007622.1 2068761 2070290 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2068761..2070290 Staphylococcus aureus RF122 3794804 YP_417402.1 CDS leuB NC_007622.1 2070293 2071339 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2070293..2071339 Staphylococcus aureus RF122 3794805 YP_417403.1 CDS leuC NC_007622.1 2071353 2072723 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2071353..2072723 Staphylococcus aureus RF122 3794806 YP_417404.1 CDS leuD NC_007622.1 2072724 2073296 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2072724..2073296 Staphylococcus aureus RF122 3794807 YP_417405.1 CDS ilvA NC_007622.1 2073311 2074579 D catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2073311..2074579 Staphylococcus aureus RF122 3795258 YP_417406.1 CDS SAB1947c NC_007622.1 2080842 2081306 R hypothetical protein complement(2080842..2081306) Staphylococcus aureus RF122 3792689 YP_417407.1 CDS SAB1948c NC_007622.1 2081290 2083440 R hypothetical protein complement(2081290..2083440) Staphylococcus aureus RF122 3792690 YP_417408.1 CDS sigB NC_007622.1 2083874 2084644 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB complement(2083874..2084644) Staphylococcus aureus RF122 3794631 YP_417409.1 CDS rsbW NC_007622.1 2084619 2085098 R binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW complement(2084619..2085098) Staphylococcus aureus RF122 3795000 YP_417410.1 CDS rsbV NC_007622.1 2085100 2085426 R anti-sigma B factor antagonist complement(2085100..2085426) Staphylococcus aureus RF122 3794999 YP_417411.1 CDS rsbU NC_007622.1 2085545 2086546 R indirect positive regulator of sigma B complement(2085545..2086546) Staphylococcus aureus RF122 3794998 YP_417412.1 CDS SAB1953c NC_007622.1 2086904 2087257 R hypothetical protein complement(2086904..2087257) Staphylococcus aureus RF122 3792691 YP_417413.1 CDS SAB1954c NC_007622.1 2087254 2087424 R hypothetical protein complement(2087254..2087424) Staphylococcus aureus RF122 3792692 YP_417414.1 CDS alr NC_007622.1 2087509 2088657 R alanine racemase complement(2087509..2088657) Staphylococcus aureus RF122 3794899 YP_417415.1 CDS acpS NC_007622.1 2088723 2089082 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(2088723..2089082) Staphylococcus aureus RF122 3794824 YP_417416.1 CDS SAB1957c NC_007622.1 2089086 2089577 R hypothetical protein complement(2089086..2089577) Staphylococcus aureus RF122 3792693 YP_417417.1 CDS SAB1958c NC_007622.1 2089570 2091147 R hypothetical protein complement(2089570..2091147) Staphylococcus aureus RF122 3792694 YP_417418.1 CDS SAB1959c NC_007622.1 2091140 2091619 R hypothetical protein complement(2091140..2091619) Staphylococcus aureus RF122 3792695 YP_417419.1 CDS kdpC NC_007622.1 2091823 2092383 R one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C complement(2091823..2092383) Staphylococcus aureus RF122 3794791 YP_417420.1 CDS kdpB NC_007622.1 2092403 2094430 R One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B complement(2092403..2094430) Staphylococcus aureus RF122 3794790 YP_417421.1 CDS kdpA NC_007622.1 2094449 2096125 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(2094449..2096125) Staphylococcus aureus RF122 3795274 YP_417422.1 CDS kdpD NC_007622.1 2096397 2099054 D two component sensor protein 2096397..2099054 Staphylococcus aureus RF122 3794792 YP_417423.1 CDS kdpE NC_007622.1 2099054 2099749 D two component sensor protein 2099054..2099749 Staphylococcus aureus RF122 3794793 YP_417424.1 CDS SAB1965c NC_007622.1 2100100 2101620 R ATP-dependent RNA helicase complement(2100100..2101620) Staphylococcus aureus RF122 3792696 YP_417425.1 CDS SAB1966c NC_007622.1 2102137 2103495 R UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanine ligase complement(2102137..2103495) Staphylococcus aureus RF122 3792697 YP_417426.1 CDS ddl NC_007622.1 2103510 2104580 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(2103510..2104580) Staphylococcus aureus RF122 3792698 YP_417427.1 CDS SAB1968 NC_007622.1 2104898 2106100 D hypothetical protein 2104898..2106100 Staphylococcus aureus RF122 3792699 YP_417428.1 CDS SAB1969c NC_007622.1 2106364 2106501 R hypothetical protein complement(2106364..2106501) Staphylococcus aureus RF122 3792700 YP_417429.1 CDS SAB1970c NC_007622.1 2106629 2106838 R hypothetical protein complement(2106629..2106838) Staphylococcus aureus RF122 3792701 YP_417430.1 CDS SAB1971c NC_007622.1 2106850 2107143 R hypothetical protein complement(2106850..2107143) Staphylococcus aureus RF122 3792702 YP_417431.1 CDS SAB1972 NC_007622.1 2107309 2108793 D cardiolipin synthetase 2107309..2108793 Staphylococcus aureus RF122 3792703 YP_417432.1 CDS SAB1973 NC_007622.1 2108821 2109468 D hypothetical protein 2108821..2109468 Staphylococcus aureus RF122 3792704 YP_417433.1 CDS SAB1974c NC_007622.1 2110132 2111004 R membrane-embedded lipoprotein precursor complement(2110132..2111004) Staphylococcus aureus RF122 3792705 YP_417434.1 CDS thiE NC_007622.1 2111090 2111731 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(2111090..2111731) Staphylococcus aureus RF122 3794324 YP_417435.1 CDS thiM NC_007622.1 2111733 2112524 R catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase complement(2111733..2112524) Staphylococcus aureus RF122 3794325 YP_417436.1 CDS tenA NC_007622.1 2113330 2114019 R transcriptional activator complement(2113330..2114019) Staphylococcus aureus RF122 3793326 YP_417437.1 CDS SAB1979 NC_007622.1 2114282 2114554 D hypothetical protein 2114282..2114554 Staphylococcus aureus RF122 3792822 YP_417438.1 CDS SAB1980c NC_007622.1 2114544 2115239 R hypothetical protein complement(2114544..2115239) Staphylococcus aureus RF122 3792823 YP_417439.1 CDS SAB1981c NC_007622.1 2115628 2116023 R single strand DNA binding protein complement(2115628..2116023) Staphylococcus aureus RF122 3792824 YP_417440.1 CDS SAB1982 NC_007622.1 2116154 2116657 D hypothetical protein 2116154..2116657 Staphylococcus aureus RF122 3792825 YP_417441.1 CDS fabZ NC_007622.1 2116714 2117154 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2116714..2117154) Staphylococcus aureus RF122 3793363 YP_417442.1 CDS murA1 NC_007622.1 2117188 2118453 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2117188..2118453) Staphylococcus aureus RF122 3794126 YP_417443.1 CDS SAB1985c NC_007622.1 2118564 2118797 R hypothetical protein complement(2118564..2118797) Staphylococcus aureus RF122 3792826 YP_417444.1 CDS atpC NC_007622.1 2119321 2119725 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(2119321..2119725) Staphylococcus aureus RF122 3792649 YP_417445.1 CDS atpD NC_007622.1 2119745 2121157 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(2119745..2121157) Staphylococcus aureus RF122 3792650 YP_417446.1 CDS atpG NC_007622.1 2121179 2122045 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(2121179..2122045) Staphylococcus aureus RF122 3792653 YP_417447.1 CDS atpA NC_007622.1 2122076 2123584 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(2122076..2123584) Staphylococcus aureus RF122 3794962 YP_417448.1 CDS atpH NC_007622.1 2123606 2124145 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(2123606..2124145) Staphylococcus aureus RF122 3792654 YP_417449.1 CDS atpF NC_007622.1 2124145 2124666 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B complement(2124145..2124666) Staphylococcus aureus RF122 3792652 YP_417450.1 CDS atpE NC_007622.1 2124864 2125076 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(2124864..2125076) Staphylococcus aureus RF122 3792651 YP_417451.1 CDS atpB NC_007622.1 2125119 2125847 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(2125119..2125847) Staphylococcus aureus RF122 3794963 YP_417452.1 CDS atpI NC_007622.1 2125868 2126221 R hypothetical protein complement(2125868..2126221) Staphylococcus aureus RF122 3792655 YP_417453.1 CDS mnaA NC_007622.1 2126388 2127518 R UDP-GlcNAc 2-epimerase complement(2126388..2127518) Staphylococcus aureus RF122 3792981 YP_417454.1 CDS upp NC_007622.1 2127539 2128168 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(2127539..2128168) Staphylococcus aureus RF122 3795136 YP_417455.1 CDS glyA NC_007622.1 2128196 2129434 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2128196..2129434) Staphylococcus aureus RF122 3794222 YP_417456.1 CDS SAB1998c NC_007622.1 2129461 2129985 R hypothetical protein complement(2129461..2129985) Staphylococcus aureus RF122 3792827 YP_417457.1 CDS SAB1999c NC_007622.1 2130092 2130511 R hypothetical protein complement(2130092..2130511) Staphylococcus aureus RF122 3792828 YP_417458.1 CDS SAB2000c NC_007622.1 2130508 2131554 R hypothetical protein complement(2130508..2131554) Staphylococcus aureus RF122 3792829 YP_417459.1 CDS SAB2001c NC_007622.1 2131638 2132474 R hypothetical protein complement(2131638..2132474) Staphylococcus aureus RF122 3792830 YP_417460.1 CDS prfA NC_007622.1 2132461 2133537 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(2132461..2133537) Staphylococcus aureus RF122 3794030 YP_417461.1 CDS SAB2003c NC_007622.1 2133538 2134137 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(2133538..2134137) Staphylococcus aureus RF122 3792831 YP_417462.1 CDS rpmE2 NC_007622.1 2134484 2134738 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B complement(2134484..2134738) Staphylococcus aureus RF122 3792920 YP_417463.1 CDS rho NC_007622.1 2134856 2136172 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2134856..2136172) Staphylococcus aureus RF122 3794278 YP_417464.1 CDS SAB2006c NC_007622.1 2136419 2137846 R aldehyde dehydrogenase complement(2136419..2137846) Staphylococcus aureus RF122 3792832 YP_417465.1 CDS SAB2007c NC_007622.1 2138085 2138423 R hypothetical protein complement(2138085..2138423) Staphylococcus aureus RF122 3792833 YP_417466.1 CDS murA2 NC_007622.1 2138509 2139768 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2138509..2139768) Staphylococcus aureus RF122 3794127 YP_417467.1 CDS SAB2009c NC_007622.1 2140234 2141094 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; fructose-bisphosphate aldolase complement(2140234..2141094) Staphylococcus aureus RF122 3792834 YP_417468.1 CDS SAB2010 NC_007622.1 2141312 2141833 D hypothetical protein 2141312..2141833 Staphylococcus aureus RF122 3792835 YP_417469.1 CDS pyrG NC_007622.1 2141942 2143552 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2141942..2143552) Staphylococcus aureus RF122 3794261 YP_417470.1 CDS rpoE NC_007622.1 2143888 2144418 R participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta complement(2143888..2144418) Staphylococcus aureus RF122 3792931 YP_417471.1 CDS SAB2013c NC_007622.1 2144530 2145390 R hypothetical protein complement(2144530..2145390) Staphylococcus aureus RF122 3792836 YP_417472.1 CDS SAB2014 NC_007622.1 2145815 2146618 D catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A; pantothenate kinase 2145815..2146618 Staphylococcus aureus RF122 3792837 YP_417473.1 CDS SAB2015c NC_007622.1 2146748 2147419 R hypothetical protein complement(2146748..2147419) Staphylococcus aureus RF122 3792838 YP_417474.1 CDS SAB2016c NC_007622.1 2147818 2149011 R hypothetical protein complement(2147818..2149011) Staphylococcus aureus RF122 3792839 YP_417475.1 CDS SAB2017c NC_007622.1 2149011 2150195 R amidase complement(2149011..2150195) Staphylococcus aureus RF122 3792840 YP_417476.1 CDS luxS NC_007622.1 2150506 2150976 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 2150506..2150976 Staphylococcus aureus RF122 3794760 YP_417477.1 CDS SAB2019c NC_007622.1 2151128 2151478 R hypothetical protein complement(2151128..2151478) Staphylococcus aureus RF122 3792841 YP_417478.1 CDS pyn NC_007622.1 2151492 2152793 R Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway; pyrimidine-nucleoside phosphorylase complement(2151492..2152793) Staphylococcus aureus RF122 3794685 YP_417479.1 CDS deoC2 NC_007622.1 2153073 2153735 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(2153073..2153735) Staphylococcus aureus RF122 3794478 YP_417480.1 CDS deoD NC_007622.1 2154049 2154759 D catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 2154049..2154759 Staphylococcus aureus RF122 3794480 YP_417481.1 CDS SAB2023c NC_007622.1 2154880 2155323 R general stress protein 20U complement(2154880..2155323) Staphylococcus aureus RF122 3793699 YP_417482.1 CDS SAB2024c NC_007622.1 2155523 2155936 R hypothetical protein complement(2155523..2155936) Staphylococcus aureus RF122 3793700 YP_417483.1 CDS SAB2025c NC_007622.1 2156394 2157767 R hypothetical protein complement(2156394..2157767) Staphylococcus aureus RF122 3793701 YP_417484.1 CDS SAB2026c NC_007622.1 2158441 2158671 R hypothetical protein complement(2158441..2158671) Staphylococcus aureus RF122 3793702 YP_417485.1 CDS SAB2027c NC_007622.1 2158702 2159640 R mannose-6-phosphate isomerase complement(2158702..2159640) Staphylococcus aureus RF122 3793703 YP_417486.1 CDS SAB2028c NC_007622.1 2160076 2160741 R hypothetical protein complement(2160076..2160741) Staphylococcus aureus RF122 3793704 YP_417487.1 CDS czrA NC_007622.1 2160893 2161213 D zinc and cobalt transport repressor protein 2160893..2161213 Staphylococcus aureus RF122 3795287 YP_417488.1 CDS czrB NC_007622.1 2161215 2162195 D cation-efflux system membrane protein 2161215..2162195 Staphylococcus aureus RF122 3795288 YP_417489.1 CDS SAB2031 NC_007622.1 2162460 2163515 D membrane-embedded lytic regulatory protein 2162460..2163515 Staphylococcus aureus RF122 3793705 YP_417490.1 CDS SAB2032c NC_007622.1 2164066 2164923 R hypothetical protein complement(2164066..2164923) Staphylococcus aureus RF122 3793706 YP_417491.1 CDS SAB2033c NC_007622.1 2164991 2165773 R ABC transporter ATP-binding protein complement(2164991..2165773) Staphylococcus aureus RF122 3793707 YP_417492.1 CDS glmS NC_007622.1 2166005 2167810 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(2166005..2167810) Staphylococcus aureus RF122 3793646 YP_417493.1 CDS SAB2035 NC_007622.1 2168260 2168433 D hypothetical protein 2168260..2168433 Staphylococcus aureus RF122 3793708 YP_417494.1 CDS mtlA NC_007622.1 2168491 2170029 D PTS system mannitol-specific IIBC component 2168491..2170029 Staphylococcus aureus RF122 3793463 YP_417495.1 CDS SAB2037 NC_007622.1 2170064 2172196 D transcription antiterminator 2170064..2172196 Staphylococcus aureus RF122 3793709 YP_417496.1 CDS mtlF NC_007622.1 2172208 2172642 D PTS system mannitol-specific IIA component 2172208..2172642 Staphylococcus aureus RF122 3794125 YP_417497.1 CDS mtlD NC_007622.1 2172642 2173748 D mannitol-1-phosphate 5-dehydrogenase 2172642..2173748 Staphylococcus aureus RF122 3793464 YP_417498.1 CDS fmtB NC_007622.1 2174067 2180000 R truncated methicillin resistance-related surface protein complement(2174067..2180000) Staphylococcus aureus RF122 3794744 YP_417499.1 CDS glmM NC_007622.1 2180278 2181633 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(2180278..2181633) Staphylococcus aureus RF122 3793710 YP_417500.1 CDS SAB2042c NC_007622.1 2181660 2182592 R hypothetical protein complement(2181660..2182592) Staphylococcus aureus RF122 3793711 YP_417501.1 CDS SAB2043c NC_007622.1 2182594 2183403 R hypothetical protein complement(2182594..2183403) Staphylococcus aureus RF122 3793712 YP_417502.1 CDS rocF NC_007622.1 2183592 2184500 R arginase complement(2183592..2184500) Staphylococcus aureus RF122 3793105 YP_417503.1 CDS SAB2045c NC_007622.1 2184629 2185453 R transposase complement(2184629..2185453) Staphylococcus aureus RF122 3793713 YP_417504.1 CDS SAB2046c NC_007622.1 2185450 2185950 R transposase complement(2185450..2185950) Staphylococcus aureus RF122 3793714 YP_417505.1 CDS SAB2047c NC_007622.1 2192150 2193214 R multidrug resistance protein complement(2192150..2193214) Staphylococcus aureus RF122 3793715 YP_417506.1 CDS SAB2048c NC_007622.1 2193362 2194807 R multidrug resistance protein complement(2193362..2194807) Staphylococcus aureus RF122 3793716 YP_417507.1 CDS SAB2049c NC_007622.1 2195127 2195600 R hypothetical protein complement(2195127..2195600) Staphylococcus aureus RF122 3793717 YP_417508.1 CDS SAB2050c NC_007622.1 2195699 2197042 R drug resistance-involved transporter complement(2195699..2197042) Staphylococcus aureus RF122 3794281 YP_417509.1 CDS SAB2051c NC_007622.1 2197215 2197901 R hemolysin complement(2197215..2197901) Staphylococcus aureus RF122 3794282 YP_417510.1 CDS SAB2052c NC_007622.1 2197917 2199104 R hypothetical protein complement(2197917..2199104) Staphylococcus aureus RF122 3794283 YP_417511.1 CDS SAB2053c NC_007622.1 2199148 2199663 R hypothetical protein complement(2199148..2199663) Staphylococcus aureus RF122 3794284 YP_417512.1 CDS SAB2054 NC_007622.1 2199841 2200101 D hypothetical protein 2199841..2200101 Staphylococcus aureus RF122 3794285 YP_417513.1 CDS SAB2055c NC_007622.1 2200233 2201603 R hypothetical protein complement(2200233..2201603) Staphylococcus aureus RF122 3794286 YP_417514.1 CDS SAB2056c NC_007622.1 2201838 2202806 R ferrichrome ABC transporter complement(2201838..2202806) Staphylococcus aureus RF122 3794287 YP_417515.1 CDS SAB2057c NC_007622.1 2202803 2203834 R ferrichrome ABC transporter complement(2202803..2203834) Staphylococcus aureus RF122 3794288 YP_417516.1 CDS SAB2058c NC_007622.1 2203846 2204859 R ferrichrome ABC transporter lipoprotein complement(2203846..2204859) Staphylococcus aureus RF122 3794289 YP_417517.1 CDS SAB2059c NC_007622.1 2205222 2206292 R hypothetical protein complement(2205222..2206292) Staphylococcus aureus RF122 3794290 YP_417518.1 CDS SAB2060c NC_007622.1 2206299 2208056 R hypothetical protein complement(2206299..2208056) Staphylococcus aureus RF122 3794291 YP_417519.1 CDS SAB2061c NC_007622.1 2208043 2209236 R membrane transporter complement(2208043..2209236) Staphylococcus aureus RF122 3794292 YP_417520.1 CDS SAB2062 NC_007622.1 2209338 2211314 D hypothetical protein 2209338..2211314 Staphylococcus aureus RF122 3794293 YP_417521.1 CDS asp23 NC_007622.1 2211474 2211983 R alkaline shock protein 23 complement(2211474..2211983) Staphylococcus aureus RF122 3794959 YP_417522.1 CDS SAB2064c NC_007622.1 2212046 2212285 R hypothetical protein complement(2212046..2212285) Staphylococcus aureus RF122 3794294 YP_417523.1 CDS SAB2065c NC_007622.1 2212298 2212894 R hypothetical protein complement(2212298..2212894) Staphylococcus aureus RF122 3794295 YP_417524.1 CDS opuD NC_007622.1 2213008 2214570 R glycine betaine transporter complement(2213008..2214570) Staphylococcus aureus RF122 3794112 YP_417525.1 CDS SAB2067c NC_007622.1 2214877 2215884 R hypothetical protein complement(2214877..2215884) Staphylococcus aureus RF122 3794296 YP_417526.1 CDS SAB2068c NC_007622.1 2216116 2217120 R quinone oxidoreductase complement(2216116..2217120) Staphylococcus aureus RF122 3794297 YP_417527.1 CDS SAB2069c NC_007622.1 2217399 2218283 R hypothetical protein complement(2217399..2218283) Staphylococcus aureus RF122 3794298 YP_417528.1 CDS lacG NC_007622.1 2218534 2219946 R catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside; 6-phospho-beta-galactosidase complement(2218534..2219946) Staphylococcus aureus RF122 3794800 YP_417529.1 CDS lacE NC_007622.1 2219964 2221676 R PTS system lactose-specific IIBC component complement(2219964..2221676) Staphylococcus aureus RF122 3794798 YP_417530.1 CDS lacF NC_007622.1 2221682 2221993 R PTS system, lactose-specific IIA component complement(2221682..2221993) Staphylococcus aureus RF122 3794799 YP_417531.1 CDS lacD NC_007622.1 2222015 2222995 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase complement(2222015..2222995) Staphylococcus aureus RF122 3794797 YP_417532.1 CDS lacC NC_007622.1 2222999 2223931 R catalyzes the formation of tagatose 1,6-bisphosphate from tagatose 6-phosphate and ATP; tagatose-6-phosphate kinase complement(2222999..2223931) Staphylococcus aureus RF122 3794796 YP_417533.1 CDS lacB NC_007622.1 2223944 2224459 R catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate; galactose-6-phosphate isomerase subunit LacB complement(2223944..2224459) Staphylococcus aureus RF122 3794795 YP_417534.1 CDS lacA NC_007622.1 2224476 2224904 R catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate; tagatose pathway for galactose utilization; galactose-6-phosphate isomerase subunit LacA complement(2224476..2224904) Staphylococcus aureus RF122 3794794 YP_417535.1 CDS lacR NC_007622.1 2225271 2226026 R lactose phosphotransferase system repressor complement(2225271..2226026) Staphylococcus aureus RF122 3794801 YP_417536.1 CDS SAB2078 NC_007622.1 2226277 2227008 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2226277..2227008 Staphylococcus aureus RF122 3794299 YP_417537.1 CDS SAB2079c NC_007622.1 2227462 2227932 R hypothetical protein complement(2227462..2227932) Staphylococcus aureus RF122 3794300 YP_417538.1 CDS SAB2080c NC_007622.1 2228539 2229387 R oxidoreductase complement(2228539..2229387) Staphylococcus aureus RF122 3794496 YP_417539.1 CDS SAB2081c NC_007622.1 2229607 2229873 R MerR family transcriptional regulator complement(2229607..2229873) Staphylococcus aureus RF122 3794497 YP_417540.1 CDS hysA2 NC_007622.1 2230263 2232692 D hyaluronate lyase 2230263..2232692 Staphylococcus aureus RF122 3794100 YP_417541.1 CDS SAB2083c NC_007622.1 2232866 2233795 R transcriptional regulator complement(2232866..2233795) Staphylococcus aureus RF122 3794498 YP_417542.1 CDS SAB2084 NC_007622.1 2233832 2234521 D hypothetical protein 2233832..2234521 Staphylococcus aureus RF122 3794499 YP_417543.1 CDS SAB2085 NC_007622.1 2234708 2235133 D hypothetical protein 2234708..2235133 Staphylococcus aureus RF122 3794500 YP_417544.1 CDS SAB2086c NC_007622.1 2235509 2236213 R alpha-acetolactate decarboxylase complement(2235509..2236213) Staphylococcus aureus RF122 3794501 YP_417545.1 CDS SAB2087c NC_007622.1 2236250 2237914 R catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase complement(2236250..2237914) Staphylococcus aureus RF122 3794502 YP_417546.1 CDS SAB2088 NC_007622.1 2238209 2238361 D hypothetical protein 2238209..2238361 Staphylococcus aureus RF122 3794503 YP_417547.1 CDS SAB2089c NC_007622.1 2239118 2239297 R hypothetical protein complement(2239118..2239297) Staphylococcus aureus RF122 3794504 YP_417548.1 CDS rpsI NC_007622.1 2239799 2240197 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(2239799..2240197) Staphylococcus aureus RF122 3794984 YP_417549.1 CDS rplM NC_007622.1 2240211 2240648 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(2240211..2240648) Staphylococcus aureus RF122 3795086 YP_417550.1 CDS truA NC_007622.1 2240887 2241690 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(2240887..2241690) Staphylococcus aureus RF122 3794505 YP_417551.1 CDS SAB2093c NC_007622.1 2241695 2242501 R cobalt ABC transporter permease complement(2241695..2242501) Staphylococcus aureus RF122 3794506 YP_417552.1 CDS cbiO NC_007622.1 2242491 2243351 R with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(2242491..2243351) Staphylococcus aureus RF122 3794507 YP_417553.1 CDS cbiO NC_007622.1 2243348 2244268 R with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(2243348..2244268) Staphylococcus aureus RF122 3794508 YP_417554.1 CDS rplQ NC_007622.1 2244694 2245062 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(2244694..2245062) Staphylococcus aureus RF122 3795090 YP_417555.1 CDS rpoA NC_007622.1 2245079 2246023 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(2245079..2246023) Staphylococcus aureus RF122 3792927 YP_417556.1 CDS rpsK NC_007622.1 2246098 2246487 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(2246098..2246487) Staphylococcus aureus RF122 3794986 YP_417557.1 CDS rpsM NC_007622.1 2246511 2246876 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(2246511..2246876) Staphylococcus aureus RF122 3794988 YP_417558.1 CDS infA NC_007622.1 2247044 2247262 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2247044..2247262) Staphylococcus aureus RF122 3795262 YP_417559.1 CDS adk NC_007622.1 2247455 2248102 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2247455..2248102) Staphylococcus aureus RF122 3794887 YP_417560.1 CDS secY NC_007622.1 2248119 2249411 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(2248119..2249411) Staphylococcus aureus RF122 3793188 YP_417561.1 CDS rplO NC_007622.1 2249411 2249851 R late assembly protein; 50S ribosomal protein L15 complement(2249411..2249851) Staphylococcus aureus RF122 3795088 YP_417562.1 CDS rpmD NC_007622.1 2249868 2250047 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(2249868..2250047) Staphylococcus aureus RF122 3795101 YP_417563.1 CDS rpsE NC_007622.1 2250064 2250564 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(2250064..2250564) Staphylococcus aureus RF122 3792936 YP_417564.1 CDS rplR NC_007622.1 2250585 2250944 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(2250585..2250944) Staphylococcus aureus RF122 3795091 YP_417565.1 CDS rplF NC_007622.1 2250975 2251511 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(2250975..2251511) Staphylococcus aureus RF122 3793112 YP_417566.1 CDS rpsH NC_007622.1 2251536 2251934 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(2251536..2251934) Staphylococcus aureus RF122 3794983 YP_417567.2 CDS rpsN NC_007622.1 2251966 2252151 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(2251966..2252151) Staphylococcus aureus RF122 3794990 YP_417568.1 CDS rplE NC_007622.1 2252174 2252713 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(2252174..2252713) Staphylococcus aureus RF122 3793111 YP_417569.1 CDS rplX NC_007622.1 2252740 2253057 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(2252740..2253057) Staphylococcus aureus RF122 3795097 YP_417570.1 CDS rplN NC_007622.1 2253093 2253461 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(2253093..2253461) Staphylococcus aureus RF122 3795087 YP_417571.1 CDS rpsQ NC_007622.1 2253493 2253756 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(2253493..2253756) Staphylococcus aureus RF122 3794993 YP_417572.1 CDS rpmC NC_007622.1 2253780 2253989 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(2253780..2253989) Staphylococcus aureus RF122 3795100 YP_417573.1 CDS rplP NC_007622.1 2253979 2254413 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(2253979..2254413) Staphylococcus aureus RF122 3795089 YP_417574.1 CDS rpsC NC_007622.1 2254416 2255069 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(2254416..2255069) Staphylococcus aureus RF122 3792934 YP_417575.1 CDS rplV NC_007622.1 2255093 2255446 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(2255093..2255446) Staphylococcus aureus RF122 3795095 YP_417576.1 CDS rpsS NC_007622.1 2255475 2255753 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(2255475..2255753) Staphylococcus aureus RF122 3794995 YP_417577.1 CDS rplB NC_007622.1 2255820 2256653 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(2255820..2256653) Staphylococcus aureus RF122 3793108 YP_417578.1 CDS rplW NC_007622.1 2256686 2256961 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(2256686..2256961) Staphylococcus aureus RF122 3795096 YP_417579.1 CDS rplD NC_007622.1 2256961 2257584 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(2256961..2257584) Staphylococcus aureus RF122 3793110 YP_417580.1 CDS rplC NC_007622.1 2257611 2258273 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(2257611..2258273) Staphylococcus aureus RF122 3793109 YP_417581.1 CDS rpsJ NC_007622.1 2258301 2258609 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(2258301..2258609) Staphylococcus aureus RF122 3794985 YP_417582.1 CDS SAB2124 NC_007622.1 2258960 2259355 D hypothetical protein 2258960..2259355 Staphylococcus aureus RF122 3794509 YP_417583.1 CDS SAB2125c NC_007622.1 2259549 2260883 R permease family protein complement(2259549..2260883) Staphylococcus aureus RF122 3794510 YP_417584.1 CDS SAB2127 NC_007622.1 2263317 2264204 D hypothetical protein 2263317..2264204 Staphylococcus aureus RF122 3794512 YP_417585.1 CDS glcU NC_007622.1 2264407 2265270 D glucose uptake protein 2264407..2265270 Staphylococcus aureus RF122 3793644 YP_417586.1 CDS SAB2129c NC_007622.1 2265378 2265551 R hypothetical protein complement(2265378..2265551) Staphylococcus aureus RF122 3794513 YP_417587.1 CDS SAB2130c NC_007622.1 2265822 2266730 R hypothetical protein complement(2265822..2266730) Staphylococcus aureus RF122 3794514 YP_417588.1 CDS SAB2131 NC_007622.1 2266863 2267027 D hypothetical protein 2266863..2267027 Staphylococcus aureus RF122 3793209 YP_417589.1 CDS SAB2132 NC_007622.1 2267272 2267589 D hypothetical protein 2267272..2267589 Staphylococcus aureus RF122 3793210 YP_417590.1 CDS SAB2133c NC_007622.1 2267776 2270943 R acriflavin resistance transport protein complement(2267776..2270943) Staphylococcus aureus RF122 3793211 YP_417591.1 CDS fmhB NC_007622.1 2271060 2272325 R methicillin resistance factor peptidoglycan pentaglycine interpeptide biosynthetic protein complement(2271060..2272325) Staphylococcus aureus RF122 3794741 YP_417592.1 CDS SAB2135 NC_007622.1 2272714 2272965 D hypothetical protein 2272714..2272965 Staphylococcus aureus RF122 3793212 YP_417593.1 CDS SAB2136c NC_007622.1 2272957 2273721 R hypothetical protein complement(2272957..2273721) Staphylococcus aureus RF122 3793213 YP_417594.1 CDS SAB2137 NC_007622.1 2273884 2274324 D hypothetical protein 2273884..2274324 Staphylococcus aureus RF122 3793214 YP_417595.1 CDS SAB2138 NC_007622.1 2274317 2275354 D membrane transporter 2274317..2275354 Staphylococcus aureus RF122 3793215 YP_417596.1 CDS SAB2139c NC_007622.1 2275624 2275974 R hypothetical protein complement(2275624..2275974) Staphylococcus aureus RF122 3793216 YP_417597.1 CDS moaA NC_007622.1 2276497 2277519 R molybdenum cofactor biosynthesis protein A complement(2276497..2277519) Staphylococcus aureus RF122 3792993 YP_417598.1 CDS mobA NC_007622.1 2277539 2278138 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(2277539..2278138) Staphylococcus aureus RF122 3793447 YP_417599.1 CDS moaD NC_007622.1 2278145 2278378 R molybdopterin converting factor small subunit complement(2278145..2278378) Staphylococcus aureus RF122 3792996 YP_417600.1 CDS moaE NC_007622.1 2278384 2278830 R molybdopterin converting factor small subunit complement(2278384..2278830) Staphylococcus aureus RF122 3793446 YP_417601.1 CDS mobB NC_007622.1 2278844 2279329 R molybdopterin-guanine dinucleotide biosynthesis protein complement(2278844..2279329) Staphylococcus aureus RF122 3793448 YP_417602.1 CDS moeA NC_007622.1 2279326 2280585 R molybdopterin biosynthesis protein complement(2279326..2280585) Staphylococcus aureus RF122 3793452 YP_417603.1 CDS moaC NC_007622.1 2280648 2281142 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2280648..2281142 Staphylococcus aureus RF122 3792995 YP_417604.1 CDS moaB NC_007622.1 2281144 2281650 R molybdenum cofactor biosynthesis protein complement(2281144..2281650) Staphylococcus aureus RF122 3792994 YP_417605.1 CDS moeB NC_007622.1 2281681 2282685 R molybdopterin biosynthesis protein complement(2281681..2282685) Staphylococcus aureus RF122 3793453 YP_417606.1 CDS modC NC_007622.1 2282854 2283459 R molybdenum transport ATP-binding protein complement(2282854..2283459) Staphylococcus aureus RF122 3793451 YP_417607.1 CDS modB NC_007622.1 2283460 2284131 R molybdate transport permease protein complement(2283460..2284131) Staphylococcus aureus RF122 3793450 YP_417608.1 CDS modA NC_007622.1 2284145 2284927 R molybdate-binding protein complement(2284145..2284927) Staphylococcus aureus RF122 3793449 YP_417609.1 CDS SAB2152 NC_007622.1 2285217 2286014 D involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 2285217..2286014 Staphylococcus aureus RF122 3793217 YP_417610.1 CDS SAB2153c NC_007622.1 2286186 2286956 R hypothetical protein complement(2286186..2286956) Staphylococcus aureus RF122 3793218 YP_417611.1 CDS SAB2154c NC_007622.1 2287028 2287582 R hypothetical protein complement(2287028..2287582) Staphylococcus aureus RF122 3793219 YP_417612.1 CDS SAB2155c NC_007622.1 2287703 2288644 R inosine-uridine preferring nucleoside hydrolase complement(2287703..2288644) Staphylococcus aureus RF122 3793220 YP_417613.1 CDS fhuD2 NC_007622.1 2289045 2289953 R ferrichrome-binding protein complement(2289045..2289953) Staphylococcus aureus RF122 3794738 YP_417614.1 CDS SAB2157c NC_007622.1 2290168 2291322 R butyryl-CoA dehydrogenase-like protein complement(2290168..2291322) Staphylococcus aureus RF122 3793221 YP_417615.1 CDS SAB2158c NC_007622.1 2291448 2291552 R hypothetical protein complement(2291448..2291552) Staphylococcus aureus RF122 3793222 YP_417616.1 CDS SAB2159c NC_007622.1 2291711 2292610 R urea transporter complement(2291711..2292610) Staphylococcus aureus RF122 3793223 YP_417617.1 CDS ureA NC_007622.1 2292876 2293178 D UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 2292876..2293178 Staphylococcus aureus RF122 3795138 YP_417618.1 CDS ureB NC_007622.1 2293192 2293602 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Staphylococcus saprophyticus plays a role in bladder invasiveness and may induce the formation of kidney and bladder stones due to the alkalization of urine; urease subunit beta 2293192..2293602 Staphylococcus aureus RF122 3795139 YP_417619.1 CDS ureC NC_007622.1 2293599 2295314 D ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 2293599..2295314 Staphylococcus aureus RF122 3794164 YP_417620.1 CDS ureE NC_007622.1 2295327 2295779 D involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 2295327..2295779 Staphylococcus aureus RF122 3794166 YP_417621.1 CDS ureF NC_007622.1 2295772 2296461 D urease accessory protein UreF 2295772..2296461 Staphylococcus aureus RF122 3794167 YP_417622.1 CDS ureG NC_007622.1 2296474 2297088 D urease accessory protein UreG 2296474..2297088 Staphylococcus aureus RF122 3794168 YP_417623.1 CDS ureD NC_007622.1 2297088 2297924 D urease accessory protein UreD 2297088..2297924 Staphylococcus aureus RF122 3794165 YP_417624.1 CDS sarR NC_007622.1 2298113 2298460 R accessory regulator complement(2298113..2298460) Staphylococcus aureus RF122 3793174 YP_417625.1 CDS SAB2168c NC_007622.1 2298888 2299214 R hypothetical protein complement(2298888..2299214) Staphylococcus aureus RF122 3793224 YP_417626.1 CDS SAB2169c NC_007622.1 2299278 2300021 R hypothetical protein complement(2299278..2300021) Staphylococcus aureus RF122 3793225 YP_417627.1 CDS SAB2170c NC_007622.1 2300047 2302002 R transcriptional regulator complement(2300047..2302002) Staphylococcus aureus RF122 3793226 YP_417628.1 CDS SAB2171 NC_007622.1 2302406 2302522 D hypothetical protein 2302406..2302522 Staphylococcus aureus RF122 3793227 YP_417629.1 CDS SAB2172 NC_007622.1 2302612 2303430 D secretory antigen precursor 2302612..2303430 Staphylococcus aureus RF122 3793228 YP_417630.1 CDS SAB2173c NC_007622.1 2303863 2305056 R hypothetical protein complement(2303863..2305056) Staphylococcus aureus RF122 3793602 YP_417631.1 CDS SAB2174c NC_007622.1 2305359 2306441 R hypothetical protein complement(2305359..2306441) Staphylococcus aureus RF122 3793603 YP_417632.1 CDS SAB2175 NC_007622.1 2306689 2307111 D hypothetical protein 2306689..2307111 Staphylococcus aureus RF122 3793604 YP_417633.1 CDS SAB2176 NC_007622.1 2307348 2307848 D exported secretory antigen precursor 2307348..2307848 Staphylococcus aureus RF122 3793605 YP_417634.1 CDS SAB2177 NC_007622.1 2307859 2308152 D hypothetical protein 2307859..2308152 Staphylococcus aureus RF122 3793606 YP_417635.1 CDS SAB2178 NC_007622.1 2308209 2309162 D dehydrogenase 2308209..2309162 Staphylococcus aureus RF122 3793607 YP_417636.1 CDS SAB2179 NC_007622.1 2309331 2309831 D transposase 2309331..2309831 Staphylococcus aureus RF122 3793608 YP_417637.1 CDS SAB2180 NC_007622.1 2309828 2310652 D transposase 2309828..2310652 Staphylococcus aureus RF122 3793609 YP_417638.1 CDS SAB2181c NC_007622.1 2310766 2311890 R hypothetical protein complement(2310766..2311890) Staphylococcus aureus RF122 3793610 YP_417639.1 CDS SAB2182c NC_007622.1 2311963 2312157 R hypothetical protein complement(2311963..2312157) Staphylococcus aureus RF122 3793611 YP_417640.1 CDS SAB2183c NC_007622.1 2312500 2313276 R autolysin E complement(2312500..2313276) Staphylococcus aureus RF122 3793612 YP_417641.1 CDS SAB2184c NC_007622.1 2313298 2313549 R hypothetical protein complement(2313298..2313549) Staphylococcus aureus RF122 3793613 YP_417642.1 CDS SAB2185c NC_007622.1 2313825 2314298 R hypothetical protein complement(2313825..2314298) Staphylococcus aureus RF122 3793614 YP_417643.1 CDS SAB2186c NC_007622.1 2314298 2317252 R formate dehydrogenase alpha subunit complement(2314298..2317252) Staphylococcus aureus RF122 3793615 YP_417644.1 CDS SAB2187c NC_007622.1 2317855 2318802 R transcriptional regulator complement(2317855..2318802) Staphylococcus aureus RF122 3793616 YP_417645.1 CDS SAB2188c NC_007622.1 2318935 2319732 R extragenic supressor protein complement(2318935..2319732) Staphylococcus aureus RF122 3793617 YP_417646.1 CDS SAB2189 NC_007622.1 2320117 2320809 D DeoR family regulatory protein 2320117..2320809 Staphylococcus aureus RF122 3793618 YP_417647.1 CDS SAB2190c NC_007622.1 2320834 2321571 R hypothetical protein complement(2320834..2321571) Staphylococcus aureus RF122 3793619 YP_417648.1 CDS SAB2191 NC_007622.1 2321620 2321949 D hypothetical protein 2321620..2321949 Staphylococcus aureus RF122 3793620 YP_417649.1 CDS SAB2192 NC_007622.1 2322394 2323266 D transcriptional regulator 2322394..2323266 Staphylococcus aureus RF122 3793268 YP_417650.1 CDS SAB2193c NC_007622.1 2323655 2325034 R amino acid permease complement(2323655..2325034) Staphylococcus aureus RF122 3793269 YP_417651.1 CDS SAB2194 NC_007622.1 2325315 2325671 D hypothetical protein 2325315..2325671 Staphylococcus aureus RF122 3793270 YP_417652.1 CDS SAB2195 NC_007622.1 2325668 2325853 D hypothetical protein 2325668..2325853 Staphylococcus aureus RF122 3793271 YP_417653.1 CDS SAB2196c NC_007622.1 2325949 2326140 R hypothetical protein complement(2325949..2326140) Staphylococcus aureus RF122 3793272 YP_417654.1 CDS SAB2197c NC_007622.1 2326151 2326786 R hypothetical protein complement(2326151..2326786) Staphylococcus aureus RF122 3793273 YP_417655.1 CDS SAB2198c NC_007622.1 2326861 2327778 R sodium-dependent transporter complement(2326861..2327778) Staphylococcus aureus RF122 3793274 YP_417656.1 CDS SAB2199 NC_007622.1 2328046 2328576 D hypothetical protein 2328046..2328576 Staphylococcus aureus RF122 3793275 YP_417657.1 CDS SAB2200c NC_007622.1 2328642 2330246 R PTS system arbutin-like IIBC component complement(2328642..2330246) Staphylococcus aureus RF122 3793276 YP_417658.1 CDS SAB2201 NC_007622.1 2330576 2331340 D transcriptional regulator 2330576..2331340 Staphylococcus aureus RF122 3793277 YP_417659.1 CDS SAB2202c NC_007622.1 2331398 2331904 R hypothetical protein complement(2331398..2331904) Staphylococcus aureus RF122 3793278 YP_417660.1 CDS SAB2203c NC_007622.1 2332090 2333451 R Na+/H+ antiporter complement(2332090..2333451) Staphylococcus aureus RF122 3793279 YP_417661.1 CDS SAB2204c NC_007622.1 2333604 2334173 R hypothetical protein complement(2333604..2334173) Staphylococcus aureus RF122 3793280 YP_417662.1 CDS SAB2205c NC_007622.1 2334660 2335541 R oxidoreductase complement(2334660..2335541) Staphylococcus aureus RF122 3793281 YP_417663.1 CDS SAB2206c NC_007622.1 2335652 2336773 R peptidase complement(2335652..2336773) Staphylococcus aureus RF122 3793282 YP_417664.1 CDS hutI NC_007622.1 2337050 2338288 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2337050..2338288) Staphylococcus aureus RF122 3794097 YP_417665.1 CDS hutU NC_007622.1 2338288 2339949 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(2338288..2339949) Staphylococcus aureus RF122 3794098 YP_417666.1 CDS SAB2209 NC_007622.1 2340351 2340992 D hypothetical protein 2340351..2340992 Staphylococcus aureus RF122 3793283 YP_417667.1 CDS SAB2210c NC_007622.1 2341147 2342463 R transposase complement(2341147..2342463) Staphylococcus aureus RF122 3793284 YP_417668.1 CDS hutG NC_007622.1 2342751 2343686 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(2342751..2343686) Staphylococcus aureus RF122 3794095 YP_417669.1 CDS SAB2212 NC_007622.1 2343976 2345232 D hypothetical protein 2343976..2345232 Staphylococcus aureus RF122 3793285 YP_417670.1 CDS SAB2213c NC_007622.1 2345297 2345983 R catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(2345297..2345983) Staphylococcus aureus RF122 3793286 YP_417671.1 CDS SAB2214 NC_007622.1 2346154 2346807 D hypothetical protein 2346154..2346807 Staphylococcus aureus RF122 3793287 YP_417672.1 CDS SAB2215c NC_007622.1 2347043 2348062 R epimerase complement(2347043..2348062) Staphylococcus aureus RF122 3793249 YP_417673.1 CDS SAB2216c NC_007622.1 2348092 2348418 R hypothetical protein complement(2348092..2348418) Staphylococcus aureus RF122 3793250 YP_417674.1 CDS SAB2217c NC_007622.1 2348467 2348601 R hypothetical protein complement(2348467..2348601) Staphylococcus aureus RF122 3793251 YP_417675.1 CDS SAB2218c NC_007622.1 2348636 2349868 R hypothetical protein complement(2348636..2349868) Staphylococcus aureus RF122 3793252 YP_417676.1 CDS SAB2219c NC_007622.1 2349861 2350760 R sodium ABC transporter ATP-binding protein complement(2349861..2350760) Staphylococcus aureus RF122 3793253 YP_417677.1 CDS SAB2220c NC_007622.1 2350991 2351638 R hypothetical protein complement(2350991..2351638) Staphylococcus aureus RF122 3793254 YP_417678.1 CDS SAB2221 NC_007622.1 2351806 2351949 D hypothetical protein 2351806..2351949 Staphylococcus aureus RF122 3793255 YP_417679.1 CDS SAB2222 NC_007622.1 2352037 2352645 D 3-methyladenine DNA glycosylase 2352037..2352645 Staphylococcus aureus RF122 3793256 YP_417680.1 CDS SAB2223 NC_007622.1 2352646 2352834 D 3-methyladenine DNA glycosylase 2352646..2352834 Staphylococcus aureus RF122 3793257 YP_417681.1 CDS SAB2224 NC_007622.1 2352982 2354190 D sodium/glutamate symporter 2352982..2354190 Staphylococcus aureus RF122 3793258 YP_417682.1 CDS fni NC_007622.1 2354238 2355287 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(2354238..2355287) Staphylococcus aureus RF122 3794746 YP_417683.1 CDS SAB2226c NC_007622.1 2355318 2356265 R divalent cation transporter complement(2355318..2356265) Staphylococcus aureus RF122 3793259 YP_417684.1 CDS SAB2227 NC_007622.1 2356362 2356853 D hypothetical protein 2356362..2356853 Staphylococcus aureus RF122 3793260 YP_417685.1 CDS SAB2228 NC_007622.1 2356850 2357269 D hypothetical protein 2356850..2357269 Staphylococcus aureus RF122 3793261 YP_417686.1 CDS SAB2229c NC_007622.1 2357379 2358299 R hypothetical protein complement(2357379..2358299) Staphylococcus aureus RF122 3793262 YP_417687.1 CDS SAB2230 NC_007622.1 2358507 2359145 D hypothetical protein 2358507..2359145 Staphylococcus aureus RF122 3793263 YP_417688.1 CDS SAB2231c NC_007622.1 2359392 2361323 R multidrug ABC transporter complement(2359392..2361323) Staphylococcus aureus RF122 3793264 YP_417689.1 CDS SAB2232c NC_007622.1 2361336 2361983 R hypothetical protein complement(2361336..2361983) Staphylococcus aureus RF122 3793265 YP_417690.1 CDS SAB2233 NC_007622.1 2362104 2362658 D TetR family regulatory protein 2362104..2362658 Staphylococcus aureus RF122 3793266 YP_417691.1 CDS tcaB NC_007622.1 2362884 2364092 R bicyclomycin and teicoplanin resistance protein complement(2362884..2364092) Staphylococcus aureus RF122 3793323 YP_417692.1 CDS tcaA NC_007622.1 2364361 2365743 R bicyclomycin and teicoplanin resistance protein complement(2364361..2365743) Staphylococcus aureus RF122 3793322 YP_417693.1 CDS tcaR NC_007622.1 2365983 2366438 R bicyclomycin resistance transcriptional regulator complement(2365983..2366438) Staphylococcus aureus RF122 3793324 YP_417694.1 CDS SAB2237 NC_007622.1 2366633 2367601 D hypothetical protein 2366633..2367601 Staphylococcus aureus RF122 3793267 YP_417695.1 CDS SAB2238c NC_007622.1 2367832 2368497 R ABC transporter ATP-binding protein complement(2367832..2368497) Staphylococcus aureus RF122 3793875 YP_417696.1 CDS SAB2239c NC_007622.1 2368497 2369552 R permease protein complement(2368497..2369552) Staphylococcus aureus RF122 3793876 YP_417697.1 CDS SAB2240 NC_007622.1 2369688 2370362 D two-component response regulator 2369688..2370362 Staphylococcus aureus RF122 3793877 YP_417698.1 CDS SAB2241 NC_007622.1 2370355 2371728 D two-component sensor histidine kinase sensor 2370355..2371728 Staphylococcus aureus RF122 3793878 YP_417699.1 CDS SAB2242 NC_007622.1 2371890 2372333 D hypothetical protein 2371890..2372333 Staphylococcus aureus RF122 3793879 YP_417700.1 CDS SAB2243 NC_007622.1 2372330 2372785 D hypothetical protein 2372330..2372785 Staphylococcus aureus RF122 3793880 YP_417701.2 CDS mqo NC_007622.1 2372851 2374329 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(2372851..2374329) Staphylococcus aureus RF122 3793455 YP_417702.1 CDS lldP NC_007622.1 2374710 2376308 R L-lactate permease complement(2374710..2376308) Staphylococcus aureus RF122 3794754 YP_417703.1 CDS SAB2246c NC_007622.1 2376302 2376430 R hypothetical protein complement(2376302..2376430) Staphylococcus aureus RF122 3793881 YP_417704.1 CDS SAB2247 NC_007622.1 2376625 2378298 D hypothetical protein 2376625..2378298 Staphylococcus aureus RF122 3793882 YP_417705.1 CDS SAB2248c NC_007622.1 2378451 2379080 R hypothetical protein complement(2378451..2379080) Staphylococcus aureus RF122 3793883 YP_417706.1 CDS SAB2249c NC_007622.1 2379394 2379909 R transcriptional regulator complement(2379394..2379909) Staphylococcus aureus RF122 3793884 YP_417707.1 CDS SAB2250 NC_007622.1 2380096 2381100 D hypothetical protein 2380096..2381100 Staphylococcus aureus RF122 3793885 YP_417708.1 CDS SAB2251c NC_007622.1 2381146 2381547 R hypothetical protein complement(2381146..2381547) Staphylococcus aureus RF122 3793886 YP_417709.1 CDS SAB2252c NC_007622.1 2381583 2382617 R thioredoxin reductase complement(2381583..2382617) Staphylococcus aureus RF122 3793887 YP_417710.1 CDS SAB2253c NC_007622.1 2382849 2383280 R hypothetical protein complement(2382849..2383280) Staphylococcus aureus RF122 3793888 YP_417711.1 CDS SAB2254c NC_007622.1 2383486 2384712 R hypothetical protein complement(2383486..2384712) Staphylococcus aureus RF122 3793889 YP_417712.1 CDS SAB2255 NC_007622.1 2384873 2385496 D hypothetical protein 2384873..2385496 Staphylococcus aureus RF122 3793890 YP_417713.1 CDS SAB2256 NC_007622.1 2385542 2386486 D cationic membrane transport protein 2385542..2386486 Staphylococcus aureus RF122 3793891 YP_417714.1 CDS scrA NC_007622.1 2386572 2388014 R PTS system sucrose-specific IIBC component complement(2386572..2388014) Staphylococcus aureus RF122 3793178 YP_417715.1 CDS SAB2258 NC_007622.1 2388197 2388580 D hypothetical protein 2388197..2388580 Staphylococcus aureus RF122 3793892 YP_417716.1 CDS SAB2259 NC_007622.1 2389855 2390028 D hypothetical protein 2389855..2390028 Staphylococcus aureus RF122 3793893 YP_417717.1 CDS SAB2260 NC_007622.1 2390068 2392173 D hypothetical protein 2390068..2392173 Staphylococcus aureus RF122 3793894 YP_417718.1 CDS SAB2261 NC_007622.1 2392244 2392666 D hypothetical protein 2392244..2392666 Staphylococcus aureus RF122 3792842 YP_417719.1 CDS SAB2262 NC_007622.1 2392944 2393312 D hypothetical protein 2392944..2393312 Staphylococcus aureus RF122 3792843 YP_417720.1 CDS gltT NC_007622.1 2393507 2394784 R proton, sodium-glutamate symport protein complement(2393507..2394784) Staphylococcus aureus RF122 3793657 YP_417721.1 CDS SAB2264c NC_007622.1 2394966 2395331 R hypothetical protein complement(2394966..2395331) Staphylococcus aureus RF122 3792844 YP_417722.1 CDS SAB2265 NC_007622.1 2395729 2396175 D MarR family transcriptional regulator 2395729..2396175 Staphylococcus aureus RF122 3792845 YP_417723.1 CDS SAB2266 NC_007622.1 2396391 2396819 D hypothetical protein 2396391..2396819 Staphylococcus aureus RF122 3792846 YP_417724.1 CDS narT NC_007622.1 2396926 2398095 R nitrite extrusion protein complement(2396926..2398095) Staphylococcus aureus RF122 3794144 YP_417725.1 CDS SAB2268 NC_007622.1 2398454 2399368 D hypothetical protein 2398454..2399368 Staphylococcus aureus RF122 3792847 YP_417726.1 CDS SAB2269 NC_007622.1 2399347 2400087 D regulatory protein 2399347..2400087 Staphylococcus aureus RF122 3792848 YP_417727.1 CDS SAB2270c NC_007622.1 2400344 2400997 R two-component response regulator complement(2400344..2400997) Staphylococcus aureus RF122 3792849 YP_417728.1 CDS SAB2271c NC_007622.1 2401020 2402054 R two component sensor histidine kinase complement(2401020..2402054) Staphylococcus aureus RF122 3792850 YP_417729.1 CDS SAB2272c NC_007622.1 2402078 2402530 R hypothetical protein complement(2402078..2402530) Staphylococcus aureus RF122 3792851 YP_417730.1 CDS narI NC_007622.1 2402550 2403227 R nitrate reductase gamma chain complement(2402550..2403227) Staphylococcus aureus RF122 3794142 YP_417731.1 CDS narJ NC_007622.1 2403220 2403795 R nitrate reductase delta chain complement(2403220..2403795) Staphylococcus aureus RF122 3794143 YP_417732.1 CDS narH NC_007622.1 2403788 2405347 R nitrate reductase beta chain complement(2403788..2405347) Staphylococcus aureus RF122 3794141 YP_417733.1 CDS narG NC_007622.1 2405337 2409026 R nitrate reductase alpha chain complement(2405337..2409026) Staphylococcus aureus RF122 3794140 YP_417734.1 CDS SAB2277c NC_007622.1 2408998 2409123 R hypothetical protein complement(2408998..2409123) Staphylococcus aureus RF122 3792852 YP_417735.1 CDS SAB2278c NC_007622.1 2409334 2410311 R uroporphyrin-III C-methyltransferase complement(2409334..2410311) Staphylococcus aureus RF122 3792853 YP_417736.1 CDS nasE NC_007622.1 2410302 2410616 R assimilatory nitrite reductase complement(2410302..2410616) Staphylococcus aureus RF122 3793622 YP_417737.1 CDS nasD NC_007622.1 2410620 2413025 R nitrite reductase complement(2410620..2413025) Staphylococcus aureus RF122 3793621 YP_417738.1 CDS SAB2281c NC_007622.1 2413053 2413838 R fumarate and nitrate reduction regulatory protein complement(2413053..2413838) Staphylococcus aureus RF122 3792854 YP_417739.1 CDS SAB2282c NC_007622.1 2414048 2414596 R hypothetical protein complement(2414048..2414596) Staphylococcus aureus RF122 3792855 YP_417740.1 CDS SAB2283c NC_007622.1 2415028 2415852 R nitrite transporter complement(2415028..2415852) Staphylococcus aureus RF122 3792856 YP_417741.1 CDS SAB2284c NC_007622.1 2416055 2416237 R hypothetical protein complement(2416055..2416237) Staphylococcus aureus RF122 3792857 YP_417742.1 CDS SAB2285c NC_007622.1 2416324 2416791 R hypothetical protein complement(2416324..2416791) Staphylococcus aureus RF122 3792858 YP_417743.1 CDS SAB2286c NC_007622.1 2416977 2418524 R zinc-binding lipoprotein complement(2416977..2418524) Staphylococcus aureus RF122 3792859 YP_417744.1 CDS SAB2287c NC_007622.1 2418818 2419084 R hypothetical protein complement(2418818..2419084) Staphylococcus aureus RF122 3792860 YP_417745.1 CDS SAB2288c NC_007622.1 2419084 2419335 R hypothetical protein complement(2419084..2419335) Staphylococcus aureus RF122 3794046 YP_417746.1 CDS SAB2289c NC_007622.1 2419606 2420205 R lipoprotein complement(2419606..2420205) Staphylococcus aureus RF122 3794047 YP_417747.1 CDS SAB2290c NC_007622.1 2420224 2420586 R lipoprotein complement(2420224..2420586) Staphylococcus aureus RF122 3794048 YP_417748.1 CDS SAB2292c NC_007622.1 2422187 2422918 R ABC transporter complement(2422187..2422918) Staphylococcus aureus RF122 3794049 YP_417749.1 CDS SAB2293c NC_007622.1 2422915 2423634 R ABC transporter permease complement(2422915..2423634) Staphylococcus aureus RF122 3794050 YP_417750.1 CDS SAB2294c NC_007622.1 2423615 2424394 R extracellular amino acid binding ABC transporter complement(2423615..2424394) Staphylococcus aureus RF122 3794051 YP_417751.1 CDS SAB2295c NC_007622.1 2424515 2425954 R multidrug resistanc-related transport system protein complement(2424515..2425954) Staphylococcus aureus RF122 3794052 YP_417752.1 CDS gpmA NC_007622.1 2426387 2427073 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(2426387..2427073) Staphylococcus aureus RF122 3794053 YP_417753.1 CDS SAB2297c NC_007622.1 2427400 2428266 R cation efflux family protein complement(2427400..2428266) Staphylococcus aureus RF122 3794054 YP_417754.1 CDS sbi NC_007622.1 2428895 2430205 D immunoglobulin G-binding protein 2428895..2430205 Staphylococcus aureus RF122 3793176 YP_417755.1 CDS SAB2299c NC_007622.1 2430378 2430560 R hypothetical protein complement(2430378..2430560) Staphylococcus aureus RF122 3794055 YP_417756.1 CDS hlgA NC_007622.1 2430695 2431624 D gamma-hemolysin component A precursor 2430695..2431624 Staphylococcus aureus RF122 3794922 YP_417757.1 CDS hlgC NC_007622.1 2432192 2433139 D gamma-hemolysin component C 2432192..2433139 Staphylococcus aureus RF122 3794924 YP_417758.1 CDS hlgB NC_007622.1 2433141 2433947 D gamma-hemolysin component B 2433141..2433947 Staphylococcus aureus RF122 3794923 YP_417759.1 CDS SAB2303c NC_007622.1 2434169 2434636 R hypothetical protein complement(2434169..2434636) Staphylococcus aureus RF122 3794056 YP_417760.1 CDS SAB2304c NC_007622.1 2434647 2435339 R catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A; 6-carboxyhexanoate--CoA ligase complement(2434647..2435339) Staphylococcus aureus RF122 3794057 YP_417761.1 CDS SAB2305c NC_007622.1 2435350 2436465 R hypothetical protein complement(2435350..2436465) Staphylococcus aureus RF122 3794058 YP_417762.1 CDS bioB NC_007622.1 2436443 2437450 R catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase complement(2436443..2437450) Staphylococcus aureus RF122 3792660 YP_417763.1 CDS bioA NC_007622.1 2437452 2438810 R adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(2437452..2438810) Staphylococcus aureus RF122 3792659 YP_417764.1 CDS SAB2308c NC_007622.1 2438788 2439474 R dethiobiotin synthetase complement(2438788..2439474) Staphylococcus aureus RF122 3794059 YP_417765.1 CDS SAB2310c NC_007622.1 2441663 2443360 R truncated ATP-binding ABC transporter complement(2441663..2443360) Staphylococcus aureus RF122 3794061 YP_417766.1 CDS SAB2311c NC_007622.1 2443573 2443767 R hypothetical protein complement(2443573..2443767) Staphylococcus aureus RF122 3794062 YP_417767.1 CDS SAB2312 NC_007622.1 2443995 2444231 D hypothetical protein 2443995..2444231 Staphylococcus aureus RF122 3794063 YP_417768.1 CDS SAB2313c NC_007622.1 2444233 2444619 R hypothetical protein complement(2444233..2444619) Staphylococcus aureus RF122 3794064 YP_417769.1 CDS SAB2314 NC_007622.1 2444887 2446029 D glycerate kinase 2444887..2446029 Staphylococcus aureus RF122 3794065 YP_417770.1 CDS SAB2315 NC_007622.1 2446089 2446748 D hypothetical protein 2446089..2446748 Staphylococcus aureus RF122 3793388 YP_417771.1 CDS SAB2316 NC_007622.1 2446931 2448142 D transporter protein 2446931..2448142 Staphylococcus aureus RF122 3793389 YP_417772.1 CDS SAB2317c NC_007622.1 2448265 2448738 R hypothetical protein complement(2448265..2448738) Staphylococcus aureus RF122 3793390 YP_417773.1 CDS SAB2318 NC_007622.1 2448851 2449507 D hypothetical protein 2448851..2449507 Staphylococcus aureus RF122 3793391 YP_417774.1 CDS SAB2319c NC_007622.1 2449570 2450376 R hypothetical protein complement(2449570..2450376) Staphylococcus aureus RF122 3793392 YP_417775.1 CDS SAB2320 NC_007622.1 2450662 2452071 D amino acid ABC transporter 2450662..2452071 Staphylococcus aureus RF122 3793393 YP_417776.1 CDS SAB2321 NC_007622.1 2452208 2454286 D sodium hydrogen exchanger family protein 2452208..2454286 Staphylococcus aureus RF122 3793394 YP_417777.1 CDS SAB2322c NC_007622.1 2454427 2456256 R hypothetical protein complement(2454427..2456256) Staphylococcus aureus RF122 3793395 YP_417778.1 CDS SAB2323 NC_007622.1 2456488 2457987 D drug resistance-involved membrane protein 2456488..2457987 Staphylococcus aureus RF122 3793396 YP_417779.1 CDS SAB2324c NC_007622.1 2458094 2458936 R hypothetical protein complement(2458094..2458936) Staphylococcus aureus RF122 3793397 YP_417780.1 CDS SAB2325c NC_007622.1 2459278 2460213 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(2459278..2460213) Staphylococcus aureus RF122 3793398 YP_417781.1 CDS SAB2326c NC_007622.1 2460439 2461839 R transmembrane efflux protein complement(2460439..2461839) Staphylococcus aureus RF122 3793399 YP_417782.1 CDS opuCD NC_007622.1 2462133 2462828 R betaine-carnitine-choline ABC transporter complement(2462133..2462828) Staphylococcus aureus RF122 3794110 YP_417783.1 CDS opuCC NC_007622.1 2462828 2463769 R betaine-carnitine-choline ABC transporter complement(2462828..2463769) Staphylococcus aureus RF122 3794109 YP_417784.1 CDS opuCB NC_007622.1 2463786 2464421 R betaine-carnitine-choline ABC transporter complement(2463786..2464421) Staphylococcus aureus RF122 3794108 YP_417785.1 CDS opuCA NC_007622.1 2464418 2465644 R betaine-carnitine-choline ABC transporter complement(2464418..2465644) Staphylococcus aureus RF122 3794107 YP_417786.1 CDS SAB2332 NC_007622.1 2467092 2468729 D amino acid transporter permease 2467092..2468729 Staphylococcus aureus RF122 3793401 YP_417787.1 CDS SAB2333 NC_007622.1 2468957 2470309 D carboxylesterase 2468957..2470309 Staphylococcus aureus RF122 3793402 YP_417788.1 CDS SAB2334c NC_007622.1 2470371 2471555 R membrane transporter complement(2470371..2471555) Staphylococcus aureus RF122 3793403 YP_417789.1 CDS SAB2335c NC_007622.1 2471951 2472727 R hypothetical protein complement(2471951..2472727) Staphylococcus aureus RF122 3793404 YP_417790.1 CDS SAB2336c NC_007622.1 2472720 2473382 R ATP-binding ABC transporter complement(2472720..2473382) Staphylococcus aureus RF122 3793405 YP_417791.1 CDS SAB2337c NC_007622.1 2473470 2473598 R hypothetical protein complement(2473470..2473598) Staphylococcus aureus RF122 3793406 YP_417792.1 CDS SAB2338c NC_007622.1 2473728 2474804 R endo-1,4-beta-glucanase complement(2473728..2474804) Staphylococcus aureus RF122 3793947 YP_417793.1 CDS SAB2339c NC_007622.1 2475160 2475426 R hypothetical protein complement(2475160..2475426) Staphylococcus aureus RF122 3793948 YP_417794.1 CDS SAB2340c NC_007622.1 2475426 2475683 R hypothetical protein complement(2475426..2475683) Staphylococcus aureus RF122 3793949 YP_417795.1 CDS SAB2341c NC_007622.1 2475807 2475983 R hypothetical protein complement(2475807..2475983) Staphylococcus aureus RF122 3793950 YP_417796.1 CDS SAB2342 NC_007622.1 2476042 2476497 D lipoprotein 2476042..2476497 Staphylococcus aureus RF122 3793951 YP_417797.1 CDS SAB2343c NC_007622.1 2476665 2478242 R glutamate synthase-ferredoxin large subunit complement(2476665..2478242) Staphylococcus aureus RF122 3793952 YP_417798.1 CDS SAB2344 NC_007622.1 2478436 2479185 D hypothetical protein 2478436..2479185 Staphylococcus aureus RF122 3793953 YP_417799.1 CDS SAB2345c NC_007622.1 2479409 2480602 R antibiotic resistance transport protein complement(2479409..2480602) Staphylococcus aureus RF122 3793954 YP_417800.1 CDS opp1F NC_007622.1 2480614 2481363 R oligopeptide transporter ATPase subunit complement(2480614..2481363) Staphylococcus aureus RF122 3793637 YP_417801.1 CDS opp1D NC_007622.1 2481356 2482171 R oligopeptide transporter ATPase subunit complement(2481356..2482171) Staphylococcus aureus RF122 3793636 YP_417802.1 CDS opp1C NC_007622.1 2482168 2483037 R oligopeptide transporter permease complement(2482168..2483037) Staphylococcus aureus RF122 3793635 YP_417803.1 CDS opp1B NC_007622.1 2483034 2483969 R oligopeptide transporter permease complement(2483034..2483969) Staphylococcus aureus RF122 3793634 YP_417804.1 CDS opp1A NC_007622.1 2483982 2485580 R peptide ABC transporter substrate-binding protein complement(2483982..2485580) Staphylococcus aureus RF122 3793633 YP_417805.1 CDS SAB2351c NC_007622.1 2485723 2487024 R hypothetical protein complement(2485723..2487024) Staphylococcus aureus RF122 3793955 YP_417806.1 CDS SAB2352c NC_007622.1 2487017 2487835 R hypothetical protein complement(2487017..2487835) Staphylococcus aureus RF122 3793956 YP_417807.1 CDS SAB2353c NC_007622.1 2487846 2488667 R hypothetical protein complement(2487846..2488667) Staphylococcus aureus RF122 3793957 YP_417808.1 CDS SAB2354c NC_007622.1 2489356 2490123 R hypothetical protein complement(2489356..2490123) Staphylococcus aureus RF122 3793958 YP_417809.1 CDS SAB2355c NC_007622.1 2490224 2491042 R short chain dehydrogenase complement(2490224..2491042) Staphylococcus aureus RF122 3793959 YP_417810.1 CDS SAB2356 NC_007622.1 2491276 2492814 D transport protein 2491276..2492814 Staphylococcus aureus RF122 3793960 YP_417811.1 CDS SAB2357c NC_007622.1 2492926 2493348 R hypothetical protein complement(2492926..2493348) Staphylococcus aureus RF122 3793961 YP_417812.1 CDS SAB2358c NC_007622.1 2493804 2494223 R hypothetical protein complement(2493804..2494223) Staphylococcus aureus RF122 3793962 YP_417813.1 CDS SAB2362 NC_007622.1 2496540 2496821 D hypothetical protein 2496540..2496821 Staphylococcus aureus RF122 3793965 YP_417814.1 CDS SAB2363c NC_007622.1 2497081 2497272 R hypothetical protein complement(2497081..2497272) Staphylococcus aureus RF122 3793966 YP_417815.1 CDS SAB2364c NC_007622.1 2497340 2497495 R hypothetical protein complement(2497340..2497495) Staphylococcus aureus RF122 3792784 YP_417816.1 CDS SAB2365c NC_007622.1 2498278 2498565 R hypothetical protein complement(2498278..2498565) Staphylococcus aureus RF122 3792785 YP_417817.1 CDS SAB2366c NC_007622.1 2498568 2498831 R hypothetical protein complement(2498568..2498831) Staphylococcus aureus RF122 3792786 YP_417818.1 CDS SAB2367c NC_007622.1 2498894 2500219 R hypothetical protein complement(2498894..2500219) Staphylococcus aureus RF122 3792787 YP_417819.1 CDS SAB2369c NC_007622.1 2501562 2502770 R DNA modification methylase complement(2501562..2502770) Staphylococcus aureus RF122 3792789 YP_417820.1 CDS SAB2370c NC_007622.1 2502840 2504432 R hypothetical protein complement(2502840..2504432) Staphylococcus aureus RF122 3792790 YP_417821.1 CDS SAB2371 NC_007622.1 2504564 2506327 D phosphoglucomutase 2504564..2506327 Staphylococcus aureus RF122 3792791 YP_417822.1 CDS SAB2372 NC_007622.1 2506611 2506877 D hypothetical protein 2506611..2506877 Staphylococcus aureus RF122 3792792 YP_417823.1 CDS SAB2373 NC_007622.1 2507022 2507330 D hypothetical protein 2507022..2507330 Staphylococcus aureus RF122 3792793 YP_417824.1 CDS gtaB NC_007622.1 2507457 2508323 R UTP-glucose-1-phosphate uridyltransferase complement(2507457..2508323) Staphylococcus aureus RF122 3794236 YP_417825.1 CDS fnbA NC_007622.1 2508503 2511475 R fibronectin-binding protein complement(2508503..2511475) Staphylococcus aureus RF122 3794745 YP_417826.1 CDS SAB2376c NC_007622.1 2511675 2511884 R hypothetical protein complement(2511675..2511884) Staphylococcus aureus RF122 3792794 YP_417827.1 CDS gntP NC_007622.1 2511931 2513289 R gluconate permease complement(2511931..2513289) Staphylococcus aureus RF122 3794227 YP_417828.1 CDS gntK NC_007622.1 2513406 2514959 R gluconokinase complement(2513406..2514959) Staphylococcus aureus RF122 3794226 YP_417829.1 CDS gntR NC_007622.1 2514984 2515664 R gluconate operon transcriptional repressor complement(2514984..2515664) Staphylococcus aureus RF122 3794228 YP_417830.1 CDS SAB2380c NC_007622.1 2515817 2516581 R MerR family transcriptional regulator complement(2515817..2516581) Staphylococcus aureus RF122 3792795 YP_417831.1 CDS SAB2381c NC_007622.1 2516746 2517438 R hypothetical protein complement(2516746..2517438) Staphylococcus aureus RF122 3792796 YP_417832.1 CDS SAB2382c NC_007622.1 2517669 2518157 R hypothetical protein complement(2517669..2518157) Staphylococcus aureus RF122 3792797 YP_417833.1 CDS SAB2383c NC_007622.1 2518225 2520225 R hypothetical protein complement(2518225..2520225) Staphylococcus aureus RF122 3792798 YP_417834.1 CDS SAB2384c NC_007622.1 2520560 2520763 R hypothetical protein complement(2520560..2520763) Staphylococcus aureus RF122 3792799 YP_417835.1 CDS SAB2385c NC_007622.1 2520959 2522236 R transport protein complement(2520959..2522236) Staphylococcus aureus RF122 3792800 YP_417836.1 CDS SAB2386 NC_007622.1 2522783 2523394 D alkaline phosphatase 2522783..2523394 Staphylococcus aureus RF122 3792801 YP_417837.1 CDS SAB2387 NC_007622.1 2523470 2523691 D hypothetical protein 2523470..2523691 Staphylococcus aureus RF122 3792802 YP_417838.1 CDS SAB2388 NC_007622.1 2523912 2524607 D ABC transporter 2523912..2524607 Staphylococcus aureus RF122 3792726 YP_417839.1 CDS SAB2389 NC_007622.1 2524609 2525379 D membrane-spanning protein 2524609..2525379 Staphylococcus aureus RF122 3792727 YP_417840.1 CDS SAB2390 NC_007622.1 2525882 2527846 D fructose-bisphosphatase 2525882..2527846 Staphylococcus aureus RF122 3792728 YP_417841.1 CDS SAB2391 NC_007622.1 2528189 2529268 D hypothetical protein 2528189..2529268 Staphylococcus aureus RF122 3792729 YP_417842.1 CDS SAB2392c NC_007622.1 2529373 2529966 R hypothetical protein complement(2529373..2529966) Staphylococcus aureus RF122 3792730 YP_417843.1 CDS SAB2393c NC_007622.1 2529988 2530956 R glyoxylase family protein complement(2529988..2530956) Staphylococcus aureus RF122 3792731 YP_417844.1 CDS SAB2394c NC_007622.1 2531034 2531468 R MarR family transcriptional regulator complement(2531034..2531468) Staphylococcus aureus RF122 3792732 YP_417845.1 CDS SAB2395 NC_007622.1 2531694 2531978 D hypothetical protein 2531694..2531978 Staphylococcus aureus RF122 3792733 YP_417846.1 CDS SAB2396 NC_007622.1 2532153 2532959 D hypothetical protein 2532153..2532959 Staphylococcus aureus RF122 3792734 YP_417847.1 CDS SAB2397c NC_007622.1 2533078 2533749 R NADH-dependent flavin reductase complement(2533078..2533749) Staphylococcus aureus RF122 3792735 YP_417848.1 CDS ddh NC_007622.1 2533956 2534765 D D-lactate dehydrogenase 2533956..2534765 Staphylococcus aureus RF122 3795293 YP_417849.1 CDS SAB2399c NC_007622.1 2535012 2535812 R hypothetical protein complement(2535012..2535812) Staphylococcus aureus RF122 3792736 YP_417850.1 CDS SAB2400 NC_007622.1 2536133 2536768 D ABC transporter ATP-binding protein 2536133..2536768 Staphylococcus aureus RF122 3792737 YP_417851.1 CDS SAB2401 NC_007622.1 2536783 2537505 D hypothetical protein 2536783..2537505 Staphylococcus aureus RF122 3792738 YP_417852.1 CDS srtA NC_007622.1 2537666 2538286 R sortase complement(2537666..2538286) Staphylococcus aureus RF122 3793012 YP_417853.1 CDS SAB2403 NC_007622.1 2538480 2538971 D phosphinothricin N-acetyltransferase 2538480..2538971 Staphylococcus aureus RF122 3792739 YP_417854.1 CDS SAB2404c NC_007622.1 2539469 2540368 R L-serine dehydratase alpha subunit complement(2539469..2540368) Staphylococcus aureus RF122 3792740 YP_417855.1 CDS SAB2405c NC_007622.1 2540382 2541062 R L-serine dehydratase beta subunit complement(2540382..2541062) Staphylococcus aureus RF122 3792741 YP_417856.1 CDS SAB2406c NC_007622.1 2541065 2542108 R surface-exposed regulatory protein complement(2541065..2542108) Staphylococcus aureus RF122 3792742 YP_417857.1 CDS SAB2407 NC_007622.1 2542989 2543153 D hypothetical protein 2542989..2543153 Staphylococcus aureus RF122 3792743 YP_417858.1 CDS SAB2408 NC_007622.1 2543199 2543951 D hypothetical protein 2543199..2543951 Staphylococcus aureus RF122 3792744 YP_417859.1 CDS SAB2409c NC_007622.1 2544031 2544999 R hypothetical protein complement(2544031..2544999) Staphylococcus aureus RF122 3792745 YP_417860.1 CDS SAB2410c NC_007622.1 2545132 2545476 R hypothetical protein complement(2545132..2545476) Staphylococcus aureus RF122 3794184 YP_417861.1 CDS SAB2411c NC_007622.1 2545518 2545928 R hypothetical protein complement(2545518..2545928) Staphylococcus aureus RF122 3794185 YP_417862.1 CDS glcB NC_007622.1 2546308 2548374 R PTS system glucose-specific IIABC component complement(2546308..2548374) Staphylococcus aureus RF122 3793643 YP_417863.1 CDS SAB2413c NC_007622.1 2548674 2550413 R catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase complement(2548674..2550413) Staphylococcus aureus RF122 3794186 YP_417864.1 CDS SAB2414c NC_007622.1 2550453 2551142 R hypothetical protein complement(2550453..2551142) Staphylococcus aureus RF122 3794187 YP_417865.1 CDS SAB2416c NC_007622.1 2551743 2552627 R LysR family transcriptional regulator complement(2551743..2552627) Staphylococcus aureus RF122 3794189 YP_417866.1 CDS SAB2417 NC_007622.1 2552788 2553006 D hypothetical protein 2552788..2553006 Staphylococcus aureus RF122 3794190 YP_417867.1 CDS SAB2418 NC_007622.1 2553396 2553827 D secretory antigen SsaA-like protein 2553396..2553827 Staphylococcus aureus RF122 3794191 YP_417868.1 CDS mvaA NC_007622.1 2553966 2555246 R hydroxymethylglutaryl-CoA reductase complement(2553966..2555246) Staphylococcus aureus RF122 3794135 YP_417869.1 CDS mvaS NC_007622.1 2555500 2556666 D 3-hydroxy-3-methylglutaryl CoA synthase 2555500..2556666 Staphylococcus aureus RF122 3794139 YP_417870.1 CDS SAB2421c NC_007622.1 2556895 2557560 R similar to streptococcal exotoxin G; hypothetical protein complement(2556895..2557560) Staphylococcus aureus RF122 3794192 YP_417871.1 CDS adaB NC_007622.1 2557761 2558282 R methylated-DNA-protein-cysteine S-methyltransferase complement(2557761..2558282) Staphylococcus aureus RF122 3794828 YP_417872.1 CDS clpL NC_007622.1 2558644 2560752 D ATP-dependent proteinase chain 2558644..2560752 Staphylococcus aureus RF122 3794834 YP_417873.1 CDS feoB NC_007622.1 2561002 2562996 R ferrous iron transport protein B complement(2561002..2562996) Staphylococcus aureus RF122 3794732 YP_417874.1 CDS SAB2425c NC_007622.1 2563008 2563235 R hypothetical protein complement(2563008..2563235) Staphylococcus aureus RF122 3794193 YP_417875.1 CDS SAB2426c NC_007622.1 2563452 2565941 R membrane transporter complement(2563452..2565941) Staphylococcus aureus RF122 3794194 YP_417876.1 CDS SAB2427 NC_007622.1 2566085 2566633 D hypothetical protein 2566085..2566633 Staphylococcus aureus RF122 3794195 YP_417877.1 CDS SAB2428c NC_007622.1 2566988 2568532 R catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; 1-pyrroline-5-carboxylate dehydrogenase complement(2566988..2568532) Staphylococcus aureus RF122 3794196 YP_417878.1 CDS SAB2429c NC_007622.1 2568722 2569303 R galactoside-O-acetyltransferase complement(2568722..2569303) Staphylococcus aureus RF122 3794197 YP_417879.1 CDS SAB2430 NC_007622.1 2569548 2569748 D hypothetical protein 2569548..2569748 Staphylococcus aureus RF122 3794198 YP_417880.1 CDS copA NC_007622.1 2569988 2572396 D copper-transporting ATPase 2569988..2572396 Staphylococcus aureus RF122 3794843 YP_417881.1 CDS SAB2432c NC_007622.1 2572845 2573843 R catalyzes the formation of pyruvate from lactate; D-lactate dehydrogenase complement(2572845..2573843) Staphylococcus aureus RF122 3794199 YP_417882.1 CDS SAB2433c NC_007622.1 2573866 2575020 R aminotransferase complement(2573866..2575020) Staphylococcus aureus RF122 3794200 YP_417883.1 CDS crtN NC_007622.1 2575447 2576955 R squalene synthase complement(2575447..2576955) Staphylococcus aureus RF122 3794847 YP_417884.1 CDS crtM NC_007622.1 2576967 2577830 R squalene desaturase complement(2576967..2577830) Staphylococcus aureus RF122 3794846 YP_417885.1 CDS SAB2436c NC_007622.1 2577867 2578994 R hypothetical protein complement(2577867..2578994) Staphylococcus aureus RF122 3794201 YP_417886.1 CDS SAB2437c NC_007622.1 2579000 2580493 R phytoene dehydrogenase complement(2579000..2580493) Staphylococcus aureus RF122 3794202 YP_417887.1 CDS SAB2438c NC_007622.1 2580486 2580983 R hypothetical protein complement(2580486..2580983) Staphylococcus aureus RF122 3794438 YP_417888.1 CDS ssaA NC_007622.1 2581149 2581916 R secretory antigen precursor complement(2581149..2581916) Staphylococcus aureus RF122 3793014 YP_417889.1 CDS SAB2440c NC_007622.1 2582028 2582174 R hypothetical protein complement(2582028..2582174) Staphylococcus aureus RF122 3794439 YP_417890.1 CDS SAB2441c NC_007622.1 2582277 2584088 R membrane-embedded acyltransferase complement(2582277..2584088) Staphylococcus aureus RF122 3794440 YP_417891.1 CDS SAB2442c NC_007622.1 2584592 2585080 R acetyltransferase complement(2584592..2585080) Staphylococcus aureus RF122 3794441 YP_417892.1 CDS isaA NC_007622.1 2585356 2586057 R immunodominant antigen A complement(2585356..2586057) Staphylococcus aureus RF122 3795265 YP_417893.1 CDS SAB2444c NC_007622.1 2586665 2587720 R hypothetical protein complement(2586665..2587720) Staphylococcus aureus RF122 3794442 YP_417894.1 CDS SAB2445 NC_007622.1 2588130 2588699 D TetR family regulatory protein 2588130..2588699 Staphylococcus aureus RF122 3794443 YP_417895.1 CDS SAB2446 NC_007622.1 2588897 2589397 D hypothetical protein 2588897..2589397 Staphylococcus aureus RF122 3794444 YP_417896.1 CDS SAB2447 NC_007622.1 2589617 2589847 D hypothetical protein 2589617..2589847 Staphylococcus aureus RF122 3794445 YP_417897.1 CDS SAB2448c NC_007622.1 2589978 2590355 R hypothetical protein complement(2589978..2590355) Staphylococcus aureus RF122 3794446 YP_417898.1 CDS SAB2449c NC_007622.1 2590372 2590926 R hypothetical protein complement(2590372..2590926) Staphylococcus aureus RF122 3794447 YP_417899.1 CDS SAB2450c NC_007622.1 2590935 2591195 R hypothetical protein complement(2590935..2591195) Staphylococcus aureus RF122 3794448 YP_417900.1 CDS SAB2451c NC_007622.1 2591214 2591513 R hypothetical protein complement(2591214..2591513) Staphylococcus aureus RF122 3794449 YP_417901.1 CDS SAB2452 NC_007622.1 2591644 2592201 D hypothetical protein 2591644..2592201 Staphylococcus aureus RF122 3794450 YP_417902.1 CDS SAB2453 NC_007622.1 2592194 2592898 D short chain oxidoreductase 2592194..2592898 Staphylococcus aureus RF122 3794451 YP_417903.1 CDS SAB2455 NC_007622.1 2594021 2594851 D hypothetical protein 2594021..2594851 Staphylococcus aureus RF122 3794453 YP_417904.1 CDS SAB2456c NC_007622.1 2594998 2595888 R cobalmin synthesis protein complement(2594998..2595888) Staphylococcus aureus RF122 3794454 YP_417905.1 CDS SAB2457c NC_007622.1 2595988 2597328 R hypothetical protein complement(2595988..2597328) Staphylococcus aureus RF122 3794455 YP_417906.1 CDS SAB2458c NC_007622.1 2597322 2598428 R hypothetical protein complement(2597322..2598428) Staphylococcus aureus RF122 3794456 YP_417907.1 CDS SAB2459c NC_007622.1 2598488 2598661 R hypothetical protein complement(2598488..2598661) Staphylococcus aureus RF122 3794457 YP_417908.1 CDS SAB2460c NC_007622.1 2598764 2599060 R hypothetical protein complement(2598764..2599060) Staphylococcus aureus RF122 3795003 YP_417909.1 CDS SAB2461c NC_007622.1 2599048 2599416 R hypothetical protein complement(2599048..2599416) Staphylococcus aureus RF122 3795004 YP_417910.1 CDS SAB2462c NC_007622.1 2599431 2599706 R hypothetical protein complement(2599431..2599706) Staphylococcus aureus RF122 3795005 YP_417911.1 CDS SAB2463c NC_007622.1 2600046 2600912 R hypothetical protein complement(2600046..2600912) Staphylococcus aureus RF122 3795006 YP_417912.1 CDS SAB2464 NC_007622.1 2601130 2602194 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2601130..2602194 Staphylococcus aureus RF122 3795007 YP_417913.1 CDS SAB2465 NC_007622.1 2602349 2602624 D hypothetical protein 2602349..2602624 Staphylococcus aureus RF122 3795008 YP_417914.1 CDS SAB2466c NC_007622.1 2602810 2603532 R hypothetical protein complement(2602810..2603532) Staphylococcus aureus RF122 3795009 YP_417915.1 CDS SAB2467 NC_007622.1 2603882 2604331 D hypothetical protein 2603882..2604331 Staphylococcus aureus RF122 3795010 YP_417916.1 CDS SAB2468c NC_007622.1 2604412 2604999 R hypothetical protein complement(2604412..2604999) Staphylococcus aureus RF122 3795011 YP_417917.1 CDS SAB2469 NC_007622.1 2605142 2606824 D hypothetical protein 2605142..2606824 Staphylococcus aureus RF122 3795012 YP_417918.1 CDS panD NC_007622.1 2606953 2607336 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(2606953..2607336) Staphylococcus aureus RF122 3794115 YP_417919.1 CDS panC NC_007622.1 2607338 2608189 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(2607338..2608189) Staphylococcus aureus RF122 3794114 YP_417920.1 CDS panB NC_007622.1 2608182 2609000 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(2608182..2609000) Staphylococcus aureus RF122 3794113 YP_417921.1 CDS SAB2473 NC_007622.1 2609073 2609933 D 2-dehydropantoate 2-reductase 2609073..2609933 Staphylococcus aureus RF122 3795013 YP_417922.1 CDS SAB2474c NC_007622.1 2610019 2610723 R alpha-acetolactate decarboxylase complement(2610019..2610723) Staphylococcus aureus RF122 3795014 YP_417923.1 CDS ldh NC_007622.1 2611001 2611960 R L-lactate dehydrogenase complement(2611001..2611960) Staphylococcus aureus RF122 3794802 YP_417924.1 CDS SAB2476 NC_007622.1 2612647 2614095 D cationic amino acid transporter 2612647..2614095 Staphylococcus aureus RF122 3795015 YP_417925.1 CDS SAB2478 NC_007622.1 2615766 2616182 D hypothetical protein 2615766..2616182 Staphylococcus aureus RF122 3795017 YP_417926.1 CDS fda NC_007622.1 2616305 2617195 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 2616305..2617195 Staphylococcus aureus RF122 3793365 YP_417927.1 CDS mqo NC_007622.1 2617390 2618886 R malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase complement(2617390..2618886) Staphylococcus aureus RF122 3793456 YP_417928.1 CDS SAB2481 NC_007622.1 2619263 2619511 D hypothetical protein 2619263..2619511 Staphylococcus aureus RF122 3795018 YP_417929.1 CDS SAB2482c NC_007622.1 2619571 2621190 R acetate-CoA ligase complement(2619571..2621190) Staphylococcus aureus RF122 3795019 YP_417930.1 CDS SAB2483c NC_007622.1 2621363 2621806 R hypothetical protein complement(2621363..2621806) Staphylococcus aureus RF122 3795020 YP_417931.1 CDS SAB2484c NC_007622.1 2621844 2622011 R hypothetical protein complement(2621844..2622011) Staphylococcus aureus RF122 3795021 YP_417932.1 CDS SAB2485c NC_007622.1 2622086 2622298 R hypothetical protein complement(2622086..2622298) Staphylococcus aureus RF122 3793986 YP_417933.1 CDS cudB NC_007622.1 2622578 2624287 R catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase complement(2622578..2624287) Staphylococcus aureus RF122 3795281 YP_417934.1 CDS cudA NC_007622.1 2624548 2626038 R glycine betaine aldehyde dehydrogenase complement(2624548..2626038) Staphylococcus aureus RF122 3795280 YP_417935.1 CDS SAB2488 NC_007622.1 2626270 2626854 D hypothetical protein 2626270..2626854 Staphylococcus aureus RF122 3793987 YP_417936.1 CDS cudT NC_007622.1 2627024 2628646 R choline transporter complement(2627024..2628646) Staphylococcus aureus RF122 3795282 YP_417937.1 CDS nrdG NC_007622.1 2629163 2629699 R anaerobic ribonucleotide reductase small subunit complement(2629163..2629699) Staphylococcus aureus RF122 3793625 YP_417938.1 CDS nrdD NC_007622.1 2629696 2631546 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(2629696..2631546) Staphylococcus aureus RF122 3793624 YP_417939.1 CDS SAB2492c NC_007622.1 2631793 2633163 R magnesium citrate secondary transporter complement(2631793..2633163) Staphylococcus aureus RF122 3793988 YP_417940.1 CDS SAB2493c NC_007622.1 2633637 2634242 R catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase complement(2633637..2634242) Staphylococcus aureus RF122 3793989 YP_417941.1 CDS cysJ NC_007622.1 2634305 2636185 R sulfite reductase flavoprotein complement(2634305..2636185) Staphylococcus aureus RF122 3795285 YP_417942.1 CDS SAB2495c NC_007622.1 2636580 2637077 R glutathione peroxidase complement(2636580..2637077) Staphylococcus aureus RF122 3793990 YP_417943.1 CDS SAB2496c NC_007622.1 2637087 2637347 R hypothetical protein complement(2637087..2637347) Staphylococcus aureus RF122 3793991 YP_417944.1 CDS SAB2497c NC_007622.1 2638501 2640501 R hypothetical protein complement(2638501..2640501) Staphylococcus aureus RF122 3793992 YP_417945.1 CDS SAB2498c NC_007622.1 2640498 2641253 R ABC transporter ATP-binding protein complement(2640498..2641253) Staphylococcus aureus RF122 3793993 YP_417946.1 CDS SAB2499c NC_007622.1 2641361 2642248 R two-component sensor histidine kinase complement(2641361..2642248) Staphylococcus aureus RF122 3793994 YP_417947.1 CDS SAB2500c NC_007622.1 2642259 2642924 R two-component sensor response regulator complement(2642259..2642924) Staphylococcus aureus RF122 3793995 YP_417948.1 CDS SAB2501c NC_007622.1 2642950 2643150 R hypothetical protein complement(2642950..2643150) Staphylococcus aureus RF122 3793996 YP_417949.1 CDS phoB NC_007622.1 2643348 2644772 D alkaline phosphatase III precursor 2643348..2644772 Staphylococcus aureus RF122 3794471 YP_417950.1 CDS SAB2503c NC_007622.1 2645055 2645510 R MarR family transcriptional regulator complement(2645055..2645510) Staphylococcus aureus RF122 3793997 YP_417951.1 CDS SAB2504c NC_007622.1 2645755 2646516 R tributyrin esterase complement(2645755..2646516) Staphylococcus aureus RF122 3793998 YP_417952.1 CDS clfB NC_007622.1 2646630 2649215 R clumping factor B complement(2646630..2649215) Staphylococcus aureus RF122 3794831 YP_417953.1 CDS SAB2506c NC_007622.1 2649565 2650269 R transcriptional regulator complement(2649565..2650269) Staphylococcus aureus RF122 3793999 YP_417954.2 CDS arcC NC_007622.1 2650368 2651309 R catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(2650368..2651309) Staphylococcus aureus RF122 3794904 YP_417955.1 CDS arcD NC_007622.1 2651326 2652756 R arginine-ornithine antiporter complement(2651326..2652756) Staphylococcus aureus RF122 3794905 YP_417956.1 CDS arcB NC_007622.1 2652847 2653857 R catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase complement(2652847..2653857) Staphylococcus aureus RF122 3794903 YP_417957.1 CDS arcA NC_007622.1 2653890 2655125 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(2653890..2655125) Staphylococcus aureus RF122 3794902 YP_417958.1 CDS argR NC_007622.1 2655472 2655921 R arginine repressor complement(2655472..2655921) Staphylococcus aureus RF122 3794947 YP_417959.1 CDS aur NC_007622.1 2656287 2657816 R zinc metalloproteinase aureolysin complement(2656287..2657816) Staphylococcus aureus RF122 3792656 YP_417960.1 CDS isaB NC_007622.1 2658240 2658767 R immunodominant antigen B complement(2658240..2658767) Staphylococcus aureus RF122 3795266 YP_417961.1 CDS SAB2514 NC_007622.1 2659025 2659483 D hypothetical protein 2659025..2659483 Staphylococcus aureus RF122 3794000 YP_417962.1 CDS SAB2515 NC_007622.1 2659723 2661597 D antiterminator transcriptional regulator 2659723..2661597 Staphylococcus aureus RF122 3794001 YP_417963.1 CDS SAB2516 NC_007622.1 2661673 2663625 D PTS system fructose-specific II component 2661673..2663625 Staphylococcus aureus RF122 3794002 YP_417964.1 CDS pmi NC_007622.1 2663639 2664577 D mannose-6-phosphate isomerase 2663639..2664577 Staphylococcus aureus RF122 3794476 YP_417965.1 CDS SAB2518c NC_007622.1 2664689 2667664 R hypothetical protein complement(2664689..2667664) Staphylococcus aureus RF122 3794003 YP_417966.1 CDS SAB2519 NC_007622.1 2667875 2669734 D N-acetylmuramoyl-L-alanine amidase 2667875..2669734 Staphylococcus aureus RF122 3794004 YP_417967.1 CDS SAB2520c NC_007622.1 2670001 2670561 R hypothetical protein complement(2670001..2670561) Staphylococcus aureus RF122 3794005 YP_417968.1 CDS SAB2521c NC_007622.1 2670733 2672628 R surface anchored protein complement(2670733..2672628) Staphylococcus aureus RF122 3793967 YP_417969.1 CDS SAB2522c NC_007622.1 2672870 2674228 R hypothetical protein complement(2672870..2674228) Staphylococcus aureus RF122 3793968 YP_417970.1 CDS SAB2523c NC_007622.1 2674221 2675729 R glycosyl transferase complement(2674221..2675729) Staphylococcus aureus RF122 3793969 YP_417971.1 CDS SAB2525c NC_007622.1 2678127 2679086 R hypothetical protein complement(2678127..2679086) Staphylococcus aureus RF122 3793971 YP_417972.1 CDS SAB2526c NC_007622.1 2679064 2680632 R hypothetical protein complement(2679064..2680632) Staphylococcus aureus RF122 3793972 YP_417973.1 CDS SAB2527c NC_007622.1 2680622 2682175 R hypothetical protein complement(2680622..2682175) Staphylococcus aureus RF122 3793973 YP_417974.1 CDS SAB2528c NC_007622.1 2682186 2683232 R preprotein translocase subunit SecY complement(2682186..2683232) Staphylococcus aureus RF122 3793974 YP_417975.1 CDS SAB2531 NC_007622.1 2689915 2690859 D lipoprotein 2689915..2690859 Staphylococcus aureus RF122 3793977 YP_417976.1 CDS SAB2532 NC_007622.1 2690843 2691148 D hypothetical protein 2690843..2691148 Staphylococcus aureus RF122 3793978 YP_417977.1 CDS SAB2533 NC_007622.1 2691297 2691656 D hypothetical protein 2691297..2691656 Staphylococcus aureus RF122 3793979 YP_417978.1 CDS SAB2534c NC_007622.1 2691741 2692352 R hypothetical protein complement(2691741..2692352) Staphylococcus aureus RF122 3793980 YP_417979.1 CDS SAB2535c NC_007622.1 2692431 2692907 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase A complement(2692431..2692907) Staphylococcus aureus RF122 3793981 YP_417980.1 CDS SAB2536c NC_007622.1 2692910 2693410 R acetyltransferase complement(2692910..2693410) Staphylococcus aureus RF122 3793982 YP_417981.1 CDS SAB2537c NC_007622.1 2693645 2694412 R capsular polysaccharide biosynthesis protein complement(2693645..2694412) Staphylococcus aureus RF122 3793983 YP_417982.1 CDS SAB2538c NC_007622.1 2694409 2695101 R capsular polysaccharide biosynthesis protein complement(2694409..2695101) Staphylococcus aureus RF122 3793984 YP_417983.1 CDS SAB2539c NC_007622.1 2695118 2695804 R capsular polysaccharide biosynthesis protein complement(2695118..2695804) Staphylococcus aureus RF122 3793985 YP_417984.1 CDS icaR NC_007622.1 2696628 2697188 R ica operon transcription regulator complement(2696628..2697188) Staphylococcus aureus RF122 3795256 YP_417985.1 CDS icaA NC_007622.1 2697352 2698590 D predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 2697352..2698590 Staphylococcus aureus RF122 3794101 YP_417986.1 CDS icaD NC_007622.1 2698541 2698858 D intercellular adhesion protein D 2698541..2698858 Staphylococcus aureus RF122 3794104 YP_417987.1 CDS icaB NC_007622.1 2698855 2699727 D intercellular adhesion protein B 2698855..2699727 Staphylococcus aureus RF122 3794102 YP_417988.1 CDS icaC NC_007622.1 2699714 2700766 D intercellular adhesion protein C 2699714..2700766 Staphylococcus aureus RF122 3794103 YP_417989.1 CDS SAB2545c NC_007622.1 2700775 2700930 R hypothetical protein complement(2700775..2700930) Staphylococcus aureus RF122 3794692 YP_417990.1 CDS lip NC_007622.1 2701076 2703121 R triacylglycerol lipase precursor complement(2701076..2703121) Staphylococcus aureus RF122 3794752 YP_417991.1 CDS SAB2547c NC_007622.1 2703841 2704104 R hypothetical protein complement(2703841..2704104) Staphylococcus aureus RF122 3794693 YP_417992.1 CDS hisIE NC_007622.1 2704640 2705272 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein complement(2704640..2705272) Staphylococcus aureus RF122 3794919 YP_417993.1 CDS hisF NC_007622.1 2705269 2706027 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(2705269..2706027) Staphylococcus aureus RF122 3794916 YP_417994.1 CDS hisA NC_007622.1 2706024 2706728 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-hosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(2706024..2706728) Staphylococcus aureus RF122 3794913 YP_417995.1 CDS hisH NC_007622.1 2706721 2707299 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(2706721..2707299) Staphylococcus aureus RF122 3794918 YP_417996.1 CDS hisB NC_007622.1 2707296 2707874 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(2707296..2707874) Staphylococcus aureus RF122 3794914 YP_417997.1 CDS hisD NC_007622.1 2708871 2710121 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(2708871..2710121) Staphylococcus aureus RF122 3794915 YP_417998.1 CDS hisG NC_007622.1 2710114 2710728 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(2710114..2710728) Staphylococcus aureus RF122 3794917 YP_417999.1 CDS hisZ NC_007622.1 2710746 2711564 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(2710746..2711564) Staphylococcus aureus RF122 3794695 YP_418000.1 CDS SAB2557c NC_007622.1 2711868 2712992 R hypothetical protein complement(2711868..2712992) Staphylococcus aureus RF122 3794696 YP_418001.1 CDS SAB2558c NC_007622.1 2713110 2713607 R hypothetical protein complement(2713110..2713607) Staphylococcus aureus RF122 3794697 YP_418002.1 CDS SAB2559c NC_007622.1 2713654 2714487 R cobalt ABC transporter complement(2713654..2714487) Staphylococcus aureus RF122 3794698 YP_418003.1 CDS SAB2560c NC_007622.1 2714484 2716196 R ATP-binding ABC transporter complement(2714484..2716196) Staphylococcus aureus RF122 3794699 YP_418004.1 CDS SAB2561c NC_007622.1 2716249 2716803 R hypothetical protein complement(2716249..2716803) Staphylococcus aureus RF122 3794700 YP_418005.1 CDS SAB2562c NC_007622.1 2716832 2717680 R hypothetical protein complement(2716832..2717680) Staphylococcus aureus RF122 3794701 YP_418006.1 CDS SAB2563 NC_007622.1 2718062 2718577 D hypothetical protein 2718062..2718577 Staphylococcus aureus RF122 3794702 YP_418007.1 CDS drp35 NC_007622.1 2719052 2720026 R antibiotic-induced protein complement(2719052..2720026) Staphylococcus aureus RF122 3793352 YP_418008.1 CDS SAB2565 NC_007622.1 2720267 2721223 D hypothetical protein 2720267..2721223 Staphylococcus aureus RF122 3794703 YP_418009.1 CDS pcp NC_007622.1 2721375 2722013 D catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase 2721375..2722013 Staphylococcus aureus RF122 3794123 YP_418010.1 CDS SAB2567c NC_007622.1 2722132 2722899 R hypothetical protein complement(2722132..2722899) Staphylococcus aureus RF122 3794704 YP_418011.1 CDS SAB2568c NC_007622.1 2722889 2723233 R hypothetical protein complement(2722889..2723233) Staphylococcus aureus RF122 3794705 YP_418012.1 CDS SAB2569 NC_007622.1 2723394 2723858 D hypothetical protein 2723394..2723858 Staphylococcus aureus RF122 3794706 YP_418013.1 CDS SAB2570 NC_007622.1 2723861 2724004 D hypothetical protein 2723861..2724004 Staphylococcus aureus RF122 3794707 YP_418014.1 CDS SAB2571 NC_007622.1 2724097 2725515 D 2-oxoglutarate-malate translocator 2724097..2725515 Staphylococcus aureus RF122 3794708 YP_418015.1 CDS SAB2572c NC_007622.1 2725928 2726836 R hypothetical protein complement(2725928..2726836) Staphylococcus aureus RF122 3794709 YP_418016.1 CDS SAB2573 NC_007622.1 2727058 2727633 D hypothetical protein 2727058..2727633 Staphylococcus aureus RF122 3794710 YP_418017.1 CDS SAB2574 NC_007622.1 2727799 2728815 D high-affinity nickel-transport protein 2727799..2728815 Staphylococcus aureus RF122 3794711 YP_418018.1 CDS SAB2575 NC_007622.1 2729052 2729870 D hypothetical protein 2729052..2729870 Staphylococcus aureus RF122 3795159 YP_418019.1 CDS SAB2576c NC_007622.1 2729912 2730109 R hypothetical protein complement(2729912..2730109) Staphylococcus aureus RF122 3795160 YP_418020.1 CDS SAB2577c NC_007622.1 2730244 2730756 R hypothetical protein complement(2730244..2730756) Staphylococcus aureus RF122 3795161 YP_418021.1 CDS vraD NC_007622.1 2731046 2731804 D ABC transporter 2731046..2731804 Staphylococcus aureus RF122 3794173 YP_418022.1 CDS vraE NC_007622.1 2731794 2733674 D ABC transporter permease 2731794..2733674 Staphylococcus aureus RF122 3794174 YP_418023.1 CDS SAB2580 NC_007622.1 2733767 2733958 D hypothetical protein 2733767..2733958 Staphylococcus aureus RF122 3795162 YP_418024.1 CDS cspB NC_007622.1 2734351 2734551 D cold shock protein 2734351..2734551 Staphylococcus aureus RF122 3795276 YP_418025.1 CDS SAB2582c NC_007622.1 2734678 2735247 R hypothetical protein complement(2734678..2735247) Staphylococcus aureus RF122 3795163 YP_418026.1 CDS SAB2583c NC_007622.1 2735507 2735902 R hypothetical protein complement(2735507..2735902) Staphylococcus aureus RF122 3795164 YP_418027.1 CDS SAB2584c NC_007622.1 2735970 2736323 R hypothetical protein complement(2735970..2736323) Staphylococcus aureus RF122 3795165 YP_418028.1 CDS SAB2585c NC_007622.1 2736640 2737479 R hypothetical protein complement(2736640..2737479) Staphylococcus aureus RF122 3795166 YP_418029.1 CDS gidB NC_007622.1 2737522 2738241 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2737522..2738241) Staphylococcus aureus RF122 3793641 YP_418030.1 CDS gidA NC_007622.1 2738241 2740118 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(2738241..2740118) Staphylococcus aureus RF122 3793640 YP_418031.1 CDS trmE NC_007622.1 2740185 2741564 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(2740185..2741564) Staphylococcus aureus RF122 3795167 YP_418032.1 CDS rnpA NC_007622.1 2741706 2742059 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(2741706..2742059) Staphylococcus aureus RF122 3793102 YP_418033.1 CDS rpmH NC_007622.1 2742180 2742317 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(2742180..2742317) Staphylococcus aureus RF122 3792925 SAB_t01 tRNA SAB_t01 NC_007622.1 24139 24210 D tRNA-Glu 24139..24210 Staphylococcus aureus RF122 3793830 SAB_t02 tRNA SAB_t02 NC_007622.1 24221 24293 D tRNA-Asp 24221..24293 Staphylococcus aureus RF122 3793823 SAB_t03 tRNA SAB_t03 NC_007622.1 463912 464001 D tRNA-Ser 463912..464001 Staphylococcus aureus RF122 3795048 SAB_t04 tRNA SAB_t04 NC_007622.1 516646 516718 D tRNA-Val 516646..516718 Staphylococcus aureus RF122 3795057 SAB_t05 tRNA SAB_t05 NC_007622.1 516738 516810 D tRNA-Thr 516738..516810 Staphylococcus aureus RF122 3795051 SAB_t06 tRNA SAB_t06 NC_007622.1 516820 516892 D tRNA-Lys 516820..516892 Staphylococcus aureus RF122 3794861 SAB_t07 tRNA SAB_t07 NC_007622.1 516926 516997 D tRNA-Gly 516926..516997 Staphylococcus aureus RF122 3793833 SAB_t08 tRNA SAB_t08 NC_007622.1 517008 517093 D tRNA-Leu 517008..517093 Staphylococcus aureus RF122 3794859 SAB_t09 tRNA SAB_t09 NC_007622.1 517102 517175 D tRNA-Arg 517102..517175 Staphylococcus aureus RF122 3793818 SAB_t10 tRNA SAB_t10 NC_007622.1 517199 517272 D tRNA-Pro 517199..517272 Staphylococcus aureus RF122 3795044 SAB_t11 tRNA SAB_t11 NC_007622.1 517296 517368 D tRNA-Ala 517296..517368 Staphylococcus aureus RF122 3794337 SAB_t12 tRNA SAB_t12 NC_007622.1 519140 519213 D tRNA-Ile 519140..519213 Staphylococcus aureus RF122 3794853 SAB_t13 tRNA SAB_t13 NC_007622.1 793879 793950 D tRNA-Arg 793879..793950 Staphylococcus aureus RF122 3793816 SAB_t14 tRNA SAB_t14 NC_007622.1 969430 969518 D tRNA-Ser 969430..969518 Staphylococcus aureus RF122 3795046 SAB_t15 tRNA SAB_t15 NC_007622.1 969524 969595 D tRNA-Asn 969524..969595 Staphylococcus aureus RF122 3793820 SAB_t16 tRNA SAB_t16 NC_007622.1 1119193 1119266 D tRNA-Arg 1119193..1119266 Staphylococcus aureus RF122 3793817 SAB_t17 tRNA SAB_t17 NC_007622.1 1887334 1887422 R tRNA-Ser complement(1887334..1887422) Staphylococcus aureus RF122 3795047 SAB_t18 tRNA SAB_t18 NC_007622.1 1887477 1887548 R tRNA-Glu complement(1887477..1887548) Staphylococcus aureus RF122 3793831 SAB_t19 tRNA SAB_t19 NC_007622.1 1887553 1887624 R tRNA-Asn complement(1887553..1887624) Staphylococcus aureus RF122 3793821 SAB_t20 tRNA SAB_t20 NC_007622.1 1887642 1887712 R tRNA-Gly complement(1887642..1887712) Staphylococcus aureus RF122 3794849 SAB_t21 tRNA SAB_t21 NC_007622.1 1887731 1887803 R tRNA-His complement(1887731..1887803) Staphylococcus aureus RF122 3794851 SAB_t22 tRNA SAB_t22 NC_007622.1 1887817 1887889 R tRNA-Phe complement(1887817..1887889) Staphylococcus aureus RF122 3795042 SAB_t23 tRNA SAB_t23 NC_007622.1 1887909 1887981 R tRNA-Asp complement(1887909..1887981) Staphylococcus aureus RF122 3793824 SAB_t24 tRNA SAB_t24 NC_007622.1 1888002 1888075 R tRNA-Met complement(1888002..1888075) Staphylococcus aureus RF122 3794864 SAB_t25 tRNA SAB_t25 NC_007622.1 1920432 1920515 R tRNA-Leu complement(1920432..1920515) Staphylococcus aureus RF122 3794856 SAB_t26 tRNA SAB_t26 NC_007622.1 1920647 1920718 R tRNA-Gly complement(1920647..1920718) Staphylococcus aureus RF122 3793815 SAB_t27 tRNA SAB_t27 NC_007622.1 1920729 1920799 R tRNA-Cys complement(1920729..1920799) Staphylococcus aureus RF122 3793827 SAB_t28 tRNA SAB_t28 NC_007622.1 1920805 1920876 R tRNA-Gln complement(1920805..1920876) Staphylococcus aureus RF122 3793828 SAB_t29 tRNA SAB_t29 NC_007622.1 1920888 1920960 R tRNA-His complement(1920888..1920960) Staphylococcus aureus RF122 3794852 SAB_t30 tRNA SAB_t30 NC_007622.1 1920966 1921036 R tRNA-Trp complement(1920966..1921036) Staphylococcus aureus RF122 3795054 SAB_t31 tRNA SAB_t31 NC_007622.1 1921052 1921132 R tRNA-Tyr complement(1921052..1921132) Staphylococcus aureus RF122 3795055 SAB_t32 tRNA SAB_t32 NC_007622.1 1921141 1921213 R tRNA-Thr complement(1921141..1921213) Staphylococcus aureus RF122 3795052 SAB_t33 tRNA SAB_t33 NC_007622.1 1921221 1921293 R tRNA-Phe complement(1921221..1921293) Staphylococcus aureus RF122 3795043 SAB_t34 tRNA SAB_t34 NC_007622.1 1921315 1921387 R tRNA-Asp complement(1921315..1921387) Staphylococcus aureus RF122 3793825 SAB_t35 tRNA SAB_t35 NC_007622.1 1921397 1921470 R tRNA-Met complement(1921397..1921470) Staphylococcus aureus RF122 3794865 SAB_t36 tRNA SAB_t36 NC_007622.1 1921488 1921577 R tRNA-Ser complement(1921488..1921577) Staphylococcus aureus RF122 3795049 SAB_t37 tRNA SAB_t37 NC_007622.1 1921619 1921691 R tRNA-Asp complement(1921619..1921691) Staphylococcus aureus RF122 3793826 SAB_t38 tRNA SAB_t38 NC_007622.1 1921702 1921791 R tRNA-Ser complement(1921702..1921791) Staphylococcus aureus RF122 3795050 SAB_t39 tRNA SAB_t39 NC_007622.1 1921801 1921874 R tRNA-Met complement(1921801..1921874) Staphylococcus aureus RF122 3794866 SAB_t40 tRNA SAB_t40 NC_007622.1 1921903 1921976 R tRNA-Met complement(1921903..1921976) Staphylococcus aureus RF122 3794867 SAB_t41 tRNA SAB_t41 NC_007622.1 1922001 1922073 R tRNA-Ala complement(1922001..1922073) Staphylococcus aureus RF122 3794338 SAB_t42 tRNA SAB_t42 NC_007622.1 1922091 1922164 R tRNA-Pro complement(1922091..1922164) Staphylococcus aureus RF122 3795045 SAB_t43 tRNA SAB_t43 NC_007622.1 1922174 1922247 R tRNA-Arg complement(1922174..1922247) Staphylococcus aureus RF122 3793819 SAB_t44 tRNA SAB_t44 NC_007622.1 1922269 1922354 R tRNA-Leu complement(1922269..1922354) Staphylococcus aureus RF122 3794860 SAB_t45 tRNA SAB_t45 NC_007622.1 1922368 1922439 R tRNA-Gly complement(1922368..1922439) Staphylococcus aureus RF122 3793834 SAB_t46 tRNA SAB_t46 NC_007622.1 1922443 1922524 R tRNA-Leu complement(1922443..1922524) Staphylococcus aureus RF122 3794858 SAB_t47 tRNA SAB_t47 NC_007622.1 1922531 1922603 R tRNA-Lys complement(1922531..1922603) Staphylococcus aureus RF122 3794862 SAB_t48 tRNA SAB_t48 NC_007622.1 1922613 1922685 R tRNA-Thr complement(1922613..1922685) Staphylococcus aureus RF122 3795053 SAB_t49 tRNA SAB_t49 NC_007622.1 1922705 1922777 R tRNA-Val complement(1922705..1922777) Staphylococcus aureus RF122 3795058 SAB_t50 tRNA SAB_t50 NC_007622.1 1926193 1926265 R tRNA-Ala complement(1926193..1926265) Staphylococcus aureus RF122 3794339 SAB_t51 tRNA SAB_t51 NC_007622.1 1926287 1926360 R tRNA-Ile complement(1926287..1926360) Staphylococcus aureus RF122 3794854 SAB_t52 tRNA SAB_t52 NC_007622.1 2078180 2078253 R tRNA-Ile complement(2078180..2078253) Staphylococcus aureus RF122 3794855 SAB_t53 tRNA SAB_t53 NC_007622.1 2080021 2080091 R tRNA-Gly complement(2080021..2080091) Staphylococcus aureus RF122 3794850 SAB_t54 tRNA SAB_t54 NC_007622.1 2080113 2080195 R tRNA-Leu complement(2080113..2080195) Staphylococcus aureus RF122 3794857 SAB_t55 tRNA SAB_t55 NC_007622.1 2186148 2186220 R tRNA-Lys complement(2186148..2186220) Staphylococcus aureus RF122 3794863 SAB_t56 tRNA SAB_t56 NC_007622.1 2186227 2186298 R tRNA-Gln complement(2186227..2186298) Staphylococcus aureus RF122 3793829 SAB_t57 tRNA SAB_t57 NC_007622.1 2186311 2186391 R tRNA-Tyr complement(2186311..2186391) Staphylococcus aureus RF122 3795056 SAB_t58 tRNA SAB_t58 NC_007622.1 2186424 2186496 R tRNA-Val complement(2186424..2186496) Staphylococcus aureus RF122 3795059 SAB_t59 tRNA SAB_t59 NC_007622.1 2186504 2186575 R tRNA-Glu complement(2186504..2186575) Staphylococcus aureus RF122 3793832 SAB_t60 tRNA SAB_t60 NC_007622.1 2186580 2186651 R tRNA-Asn complement(2186580..2186651) Staphylococcus aureus RF122 3793822 SAB_r01 rRNA SAB_r01 NC_007622.1 473153 474707 D 16S ribosomal RNA 473153..474707 Staphylococcus aureus RF122 3795168 SAB_r02 rRNA SAB_r02 NC_007622.1 475149 478072 D 23S ribosomal RNA 475149..478072 Staphylococcus aureus RF122 3795173 SAB_r03 rRNA SAB_r03 NC_007622.1 478145 478259 D 5S ribosomal RNA 478145..478259 Staphylococcus aureus RF122 3794810 SAB_r04 rRNA SAB_r04 NC_007622.1 516519 516633 D 5S ribosomal RNA 516519..516633 Staphylococcus aureus RF122 3794811 SAB_r05 rRNA SAB_r05 NC_007622.1 517493 519047 D 16S ribosomal RNA 517493..519047 Staphylococcus aureus RF122 3795169 SAB_r06 rRNA SAB_r06 NC_007622.1 519507 522419 D 23S ribosomal RNA 519507..522419 Staphylococcus aureus RF122 3795174 SAB_r07 rRNA SAB_r07 NC_007622.1 522503 522617 D 5S ribosomal RNA 522503..522617 Staphylococcus aureus RF122 3794812 SAB_r08 rRNA SAB_r08 NC_007622.1 1922791 1922904 R 5S ribosomal RNA complement(1922791..1922904) Staphylococcus aureus RF122 3794813 SAB_r09 rRNA SAB_r09 NC_007622.1 1922977 1925899 R 23S ribosomal RNA complement(1922977..1925899) Staphylococcus aureus RF122 3795175 SAB_r10 rRNA SAB_r10 NC_007622.1 1926450 1928004 R 16S ribosomal RNA complement(1926450..1928004) Staphylococcus aureus RF122 3795170 SAB_r11 rRNA SAB_r11 NC_007622.1 2074777 2074891 R 5S ribosomal RNA complement(2074777..2074891) Staphylococcus aureus RF122 3794814 SAB_r12 rRNA SAB_r12 NC_007622.1 2074964 2077887 R 23S ribosomal RNA complement(2074964..2077887) Staphylococcus aureus RF122 3795176 SAB_r13 rRNA SAB_r13 NC_007622.1 2078346 2079900 R 16S ribosomal RNA complement(2078346..2079900) Staphylococcus aureus RF122 3795171 SAB_r14 rRNA SAB_r14 NC_007622.1 2186662 2186776 R 5S ribosomal RNA complement(2186662..2186776) Staphylococcus aureus RF122 3794815 SAB_r15 rRNA SAB_r15 NC_007622.1 2186849 2189771 R 23S ribosomal RNA complement(2186849..2189771) Staphylococcus aureus RF122 3795177 SAB_r16 rRNA SAB_r16 NC_007622.1 2190136 2191689 R 16S ribosomal RNA complement(2190136..2191689) Staphylococcus aureus RF122 3795172