-- dump date 20140620_075740 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002633101.1 224475495 7552307 87..224 1 NC_012121.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 224 rpmH 7552307 rpmH Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L34 YP_002633101.1 87 D 396513 CDS YP_002633102.1 224475496 7552069 376..723 1 NC_012121.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 723 rnpA 7552069 rnpA Staphylococcus carnosus subsp. carnosus TM300 ribonuclease P YP_002633102.1 376 D 396513 CDS YP_002633103.1 224475497 7552033 853..2235 1 NC_012121.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 2235 trmE 7552033 trmE Staphylococcus carnosus subsp. carnosus TM300 tRNA modification GTPase TrmE YP_002633103.1 853 D 396513 CDS YP_002633104.1 224475498 7552199 2251..4125 1 NC_012121.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4125 gidA 7552199 gidA Staphylococcus carnosus subsp. carnosus TM300 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_002633104.1 2251 D 396513 CDS YP_002633105.1 224475499 7551627 4126..4848 1 NC_012121.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 4848 gidB 7551627 gidB Staphylococcus carnosus subsp. carnosus TM300 16S rRNA methyltransferase GidB YP_002633105.1 4126 D 396513 CDS YP_002633106.1 224475500 7551628 4895..5737 1 NC_012121.1 similar to SpoOJ-like homolog,probably involved in regulation of transcription,InterPro: ParB-like partition protein; Hypothetical protein; putative DNA-binding protein 5737 7551628 Sca_0006 Staphylococcus carnosus subsp. carnosus TM300 putative DNA-binding protein YP_002633106.1 4895 D 396513 CDS YP_002633107.1 224475501 7549770 5872..6801 1 NC_012121.1 Hypothetical protein; hypothetical protein 6801 7549770 Sca_0007 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633107.1 5872 D 396513 CDS YP_002633108.1 224475502 7549771 6816..6989 1 NC_012121.1 Hypothetical protein; hypothetical protein 6989 7549771 Sca_0008 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633108.1 6816 D 396513 CDS YP_002633109.1 224475503 7549772 7083..7754 1 NC_012121.1 Hypothetical protein; hypothetical protein 7754 7549772 Sca_0009 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633109.1 7083 D 396513 CDS YP_002633110.1 224475504 7549773 8074..9234 1 NC_012121.1 (O31665) Transaminase mtnE (EC 2.6.1.-),InterPro: Aminotransferase class I and II; Hypothetical protein; putative aminotransferase 9234 7549773 Sca_0010 Staphylococcus carnosus subsp. carnosus TM300 putative aminotransferase YP_002633110.1 8074 D 396513 CDS YP_002633111.1 224475505 7549774 complement(9943..10692) 1 NC_012121.1 conserved hypothetical protein,InterPro: Putative cyclase; Hypothetical protein; hypothetical protein 10692 7549774 Sca_0011 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633111.1 9943 R 396513 CDS YP_002633112.1 224475506 7549775 complement(10871..13114) 1 NC_012121.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 13114 metE 7549775 metE Staphylococcus carnosus subsp. carnosus TM300 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_002633112.1 10871 R 396513 CDS YP_002633113.1 224475507 7551777 complement(13111..14952) 1 NC_012121.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein 14952 metH 7551777 metH Staphylococcus carnosus subsp. carnosus TM300 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein YP_002633113.1 13111 R 396513 CDS YP_002633114.1 224475508 7551779 complement(14906..16078) 1 NC_012121.1 Hypothetical protein; putative cystathionine beta-lyase 16078 metC 7551779 metC Staphylococcus carnosus subsp. carnosus TM300 putative cystathionine beta-lyase YP_002633114.1 14906 R 396513 CDS YP_002633115.1 224475509 7551775 16830..17666 1 NC_012121.1 Hypothetical protein; putative DNA-binding protein 17666 7551775 Sca_0015 Staphylococcus carnosus subsp. carnosus TM300 putative DNA-binding protein YP_002633115.1 16830 D 396513 CDS YP_002633116.1 224475510 7549776 17755..18654 1 NC_012121.1 emb|CAG39381.1| putative membrane protein ,InterPro: Mechanosensitive (MS) ion channel; Hypothetical protein; hypothetical protein 18654 7549776 Sca_0016 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633116.1 17755 D 396513 CDS YP_002633117.1 224475511 7549777 18673..18885 1 NC_012121.1 Hypothetical protein; hypothetical protein 18885 7549777 Sca_0017 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633117.1 18673 D 396513 CDS YP_002633118.1 224475512 7549778 18885..19982 1 NC_012121.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 19982 7549778 Sca_0018 Staphylococcus carnosus subsp. carnosus TM300 GTP-dependent nucleic acid-binding protein EngD YP_002633118.1 18885 D 396513 CDS YP_002633119.1 224475513 7549779 complement(20051..20761) 1 NC_012121.1 COG1985: Pyrimidine reductase, riboflavin biosynthesis [Desulfitobacterium hafniense]; Hypothetical protein; putative 5-amino-6-(5-phosphoribosylamino)uracil reductase 20761 ribD 7549779 ribD Staphylococcus carnosus subsp. carnosus TM300 putative 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_002633119.1 20051 R 396513 CDS YP_002633120.1 224475514 7552024 21143..25450 1 NC_012121.1 (ref|NP_991886.1| enhancing factor (viral) [Yersinia pestis biovar Medievalis str. 91001],InterPro: Peptidase M60 viral enhancin protein,YSIRK Gram-positive signal peptide,Surface protein from Gram-positive cocci,anchor region; Hypothetical protein; putative protease 25450 7552024 Sca_0020 Staphylococcus carnosus subsp. carnosus TM300 putative protease YP_002633120.1 21143 D 396513 CDS YP_002633121.1 224475515 7549780 complement(25664..26431) 1 NC_012121.1 oxidoreductase, short-chain dehydrogenase/reductase family [Bacillus cereus ATCC 10987] gb|AAS39853.1| oxidoreductase, short-chain dehydrogenase/reductase family [Bacillus cereus ATCC 10987],InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative oxidoreductase 26431 7549780 Sca_0021 Staphylococcus carnosus subsp. carnosus TM300 putative oxidoreductase YP_002633121.1 25664 R 396513 CDS YP_002633122.1 224475516 7549781 complement(26633..27637) 1 NC_012121.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 27637 argF 7549781 argF Staphylococcus carnosus subsp. carnosus TM300 ornithine carbamoyltransferase YP_002633122.1 26633 R 396513 CDS YP_002633123.1 224475517 7551410 complement(27878..28228) 1 NC_012121.1 (P13976) Protein pemK,gi|24195434|gb|AAN48980.1| probable ppGpp-regulated growth inhibitor ChpA/MazF [Leptospira interrogans serovar lai str. 56601],InterPro: PemK-like protein; Hypothetical protein; putative cell growth inhibitor, pemK-like protein 28228 pemK 7551410 pemK Staphylococcus carnosus subsp. carnosus TM300 putative cell growth inhibitor, pemK-like protein YP_002633123.1 27878 R 396513 CDS YP_002633124.1 224475518 7551923 complement(28222..28479) 1 NC_012121.1 gi|16130690|ref|NP_417263.1| suppressor of inhibitory function of ChpA, PemI-like,autoregulated; part of proteic killer gene system,suppressor of inhibitory function of ChpA [Escherichia coli K12],pfam04014,SpoVT_AbrB, SpoVT / AbrB like domain. One member of this family is AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator or the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the Bacillus subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA binding activity in the Bacillus 0 AbrB homologue requires hexamerisation. Another family member has been isolated from the archaeon Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The E.coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.,only 75% aligned; Hypothetical protein; hypothetical protein 28479 pemI 7551923 pemI Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633124.1 28222 R 396513 CDS YP_002633125.1 224475519 7551922 28637..29671 1 NC_012121.1 (P00644) Thermonuclease precursor (EC 3.1.31.1) (TNase) (Micrococcal nuclease) (Staphylococcal nuclease),InterPro: Staphylococcus nuclease (SNase-like); Hypothetical protein; thermonuclease 29671 nuc 7551922 nuc Staphylococcus carnosus subsp. carnosus TM300 thermonuclease YP_002633125.1 28637 D 396513 CDS YP_002633126.1 224475520 7551869 29812..30108 1 NC_012121.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 30108 rpsF 7551869 rpsF Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S6 YP_002633126.1 29812 D 396513 CDS YP_002633127.1 224475521 7552079 30130..30651 1 NC_012121.1 (Q814G6) Single-strand binding protein (SSB) (Helix-destabilizing protein),InterPro: Single-strand binding protein; Hypothetical protein; putative single-strand DNA-binding protein 30651 ssb 7552079 ssb Staphylococcus carnosus subsp. carnosus TM300 putative single-strand DNA-binding protein YP_002633127.1 30130 D 396513 CDS YP_002633128.1 224475522 7552146 30708..30950 1 NC_012121.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 30950 rpsR 7552146 rpsR Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S18 YP_002633128.1 30708 D 396513 CDS YP_002633129.1 224475523 7552092 31246..31464 1 NC_012121.1 Hypothetical protein; hypothetical protein 31464 7552092 Sca_0029 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633129.1 31246 D 396513 CDS YP_002633130.1 224475524 7549782 31751..32074 1 NC_012121.1 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; heme-degrading monooxygenase IsdI 32074 7549782 Sca_0030 Staphylococcus carnosus subsp. carnosus TM300 heme-degrading monooxygenase IsdI YP_002633130.1 31751 D 396513 CDS YP_002633131.1 224475525 7549783 32535..33128 1 NC_012121.1 Hypothetical protein; hypothetical protein 33128 7549783 Sca_0031 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633131.1 32535 D 396513 CDS YP_002633132.1 224475526 7549784 33360..33953 1 NC_012121.1 Hypothetical protein; putative phosphoglycerate mutase 33953 gpm3 7549784 gpm3 Staphylococcus carnosus subsp. carnosus TM300 putative phosphoglycerate mutase YP_002633132.1 33360 D 396513 CDS YP_002633133.1 224475527 7551661 complement(34001..35167) 1 NC_012121.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 35167 dapE 7551661 dapE Staphylococcus carnosus subsp. carnosus TM300 succinyl-diaminopimelate desuccinylase YP_002633133.1 34001 R 396513 CDS YP_002633134.1 224475528 7551514 35442..35882 1 NC_012121.1 ydfG; similar to hypothetical proteins,InterPro: Carboxymuconolactone decarboxylase; Hypothetical protein; hypothetical protein 35882 ydfG 7551514 ydfG Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633134.1 35442 D 396513 CDS YP_002633135.1 224475529 7552305 complement(35935..36558) 1 NC_012121.1 Hypothetical protein; putative lipoprotein 36558 7552305 Sca_0035 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633135.1 35935 R 396513 CDS YP_002633136.1 224475530 7549785 complement(36632..37261) 1 NC_012121.1 b|AAN00897.1| PAP2 family protein [Streptococcus agalactiae 2603V/R],InterPro: PA-phosphatase related phosphoesterase; Hypothetical protein; putative phosphatase 37261 7549785 Sca_0036 Staphylococcus carnosus subsp. carnosus TM300 putative phosphatase YP_002633136.1 36632 R 396513 CDS YP_002633137.1 224475531 7549786 37565..37684 1 NC_012121.1 Hypothetical protein; hypothetical protein 37684 7549786 Sca_0037 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633137.1 37565 D 396513 CDS YP_002633138.1 224475532 7549787 complement(37836..39359) 1 NC_012121.1 (Q99WJ7) Alkyl hydroperoxide reductase subunit F (EC 1.6.4.-),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein; alkyl hydroperoxide reductase subunit F 39359 ahpF 7549787 ahpF Staphylococcus carnosus subsp. carnosus TM300 alkyl hydroperoxide reductase subunit F YP_002633138.1 37836 R 396513 CDS YP_002633139.1 224475533 7551381 complement(39376..39945) 1 NC_012121.1 (Q8CMQ2) Alkyl hydroperoxide reductase subunit C (EC 1.6.4.-),InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Hypothetical protein; alkyl hydroperoxide reductase subunit C 39945 ahpC 7551381 ahpC Staphylococcus carnosus subsp. carnosus TM300 alkyl hydroperoxide reductase subunit C YP_002633139.1 39376 R 396513 CDS YP_002633140.1 224475534 7551380 complement(40351..41130) 1 NC_012121.1 (P42270) 2-oxo-hepta-3-ene-17-dioic acid hydratase (EC 4.2.-.-) (OHED hydratase),InterPro: Hydratase/decarboxylase; Hypothetical protein; putative 2-keto-4-pentenoate hydratase 41130 7551380 Sca_0040 Staphylococcus carnosus subsp. carnosus TM300 putative 2-keto-4-pentenoate hydratase YP_002633140.1 40351 R 396513 CDS YP_002633141.1 224475535 7549788 41290..42045 1 NC_012121.1 (P39605) Nitro/flavin reductase (EC 1.-.-.-),InterPro: Nitroreductase family; Hypothetical protein; nitroreductase family protein 42045 7549788 Sca_0041 Staphylococcus carnosus subsp. carnosus TM300 nitroreductase family protein YP_002633141.1 41290 D 396513 CDS YP_002633142.1 224475536 7549789 complement(42155..43480) 1 NC_012121.1 Hypothetical protein; putative sodium:dicarboxylate symporter 43480 7549789 Sca_0042 Staphylococcus carnosus subsp. carnosus TM300 putative sodium:dicarboxylate symporter YP_002633142.1 42155 R 396513 CDS YP_002633143.1 224475537 7549790 complement(43845..44816) 1 NC_012121.1 Hypothetical protein; putative DNA-binding protein 44816 7549790 Sca_0043 Staphylococcus carnosus subsp. carnosus TM300 putative DNA-binding protein YP_002633143.1 43845 R 396513 CDS YP_002633144.1 224475538 7549791 complement(44934..45245) 1 NC_012121.1 similar to C-terminal part (aa 119..220) of gi|73663636|ref|YP_302417.1| Gene info hypothetical protein SSP2327 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length=221; Hypothetical protein; hypothetical protein 45245 7549791 Sca_0044 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633144.1 44934 R 396513 CDS YP_002633145.1 224475539 7549792 complement(45327..45599) 1 NC_012121.1 similar to N-terminal part (aa 1..90) of gi|73663636|ref|YP_302417.1| Gene info hypothetical protein SSP2327 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length=221; Hypothetical protein; hypothetical protein 45599 7549792 Sca_0045 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633145.1 45327 R 396513 CDS YP_002633146.1 224475540 7549793 complement(45707..46087) 1 NC_012121.1 Hypothetical protein; hypothetical protein 46087 7549793 Sca_0046 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633146.1 45707 R 396513 CDS YP_002633147.1 224475541 7549794 46819..47397 1 NC_012121.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 47397 xprT 7549794 xprT Staphylococcus carnosus subsp. carnosus TM300 xanthine phosphoribosyltransferase YP_002633147.1 46819 D 396513 CDS YP_002633148.1 224475542 7552302 47399..48667 1 NC_012121.1 (P42086) Xanthine permease ,InterPro: Xanthine/uracil permease family; Hypothetical protein; putative xanthine permease 48667 pbuX 7552302 pbuX Staphylococcus carnosus subsp. carnosus TM300 putative xanthine permease YP_002633148.1 47399 D 396513 CDS YP_002633149.1 224475543 7551910 48701..50167 1 NC_012121.1 (Q8CMQ7) Inosine-5-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD),InterPro: IMP dehydrogenase/GMP reductase; Hypothetical protein; putative inositol-monophosphate dehydrogenase 50167 guaB 7551910 guaB Staphylococcus carnosus subsp. carnosus TM300 putative inositol-monophosphate dehydrogenase YP_002633149.1 48701 D 396513 CDS YP_002633150.1 224475544 7551671 50184..51725 1 NC_012121.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 51725 guaA 7551671 guaA Staphylococcus carnosus subsp. carnosus TM300 GMP synthase YP_002633150.1 50184 D 396513 CDS YP_002633151.1 224475545 7551670 51990..52766 1 NC_012121.1 (P54721) Hypothetical protein yfiE,PSI BLAST COG: Predicted ring-cleavage extradiol dioxygenase,COG0346,GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism],InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 52766 7551670 Sca_0051 Staphylococcus carnosus subsp. carnosus TM300 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein YP_002633151.1 51990 D 396513 CDS YP_002633152.1 224475546 7549795 52903..53454 1 NC_012121.1 Hypothetical protein; hypothetical protein 53454 7549795 Sca_0052 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633152.1 52903 D 396513 CDS YP_002633153.1 224475547 7549796 complement(53494..53898) 1 NC_012121.1 (P32091) MutT-like protein (ORF154),InterPro: NUDIX hydrolase; Hypothetical protein; mutT/nudix family protein 53898 mutT 7549796 mutT Staphylococcus carnosus subsp. carnosus TM300 mutT/nudix family protein YP_002633153.1 53494 R 396513 CDS YP_002633154.1 224475548 7551831 54059..54574 1 NC_012121.1 Hypothetical protein; hypothetical protein 54574 7551831 Sca_0054 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633154.1 54059 D 396513 CDS YP_002633155.1 224475549 7549797 54861..56759 1 NC_012121.1 (O34319) Putative glycosyl transferase ykcC (EC 2.-.-.-),InterPro: Glycosyl transferase family 2; Hypothetical protein; putative glycosyl transferase 56759 7549797 Sca_0056 Staphylococcus carnosus subsp. carnosus TM300 putative glycosyl transferase YP_002633155.1 54861 D 396513 CDS YP_002633156.1 224475550 7549798 complement(56876..58462) 1 NC_012121.1 (P39115) Nucleotide binding protein expZ,btk:BT9727_4858 (KEGG) vba; probable MDR-type ABC transporter, ATP-binding protein,InterPro: AAA ATPase; Hypothetical protein; ABC transporter ATP-binding protein 58462 vba 7549798 vba Staphylococcus carnosus subsp. carnosus TM300 ABC transporter ATP-binding protein YP_002633156.1 56876 R 396513 CDS YP_002633157.1 224475551 7552294 58773..59498 1 NC_012121.1 (Q8CMX3) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (PAPS reductase thioredoxin dependent) (PAdoPS reductase) (3-phosphoadenylylsulfate reductase) (PAPS sulfotransferase),InterPro: Phosphoadenosine phosphosulfate reductase CysH-type; Hypothetical protein; putative phosphoadenosine phosphosulfate reductase 59498 cysH 7552294 cysH Staphylococcus carnosus subsp. carnosus TM300 putative phosphoadenosine phosphosulfate reductase YP_002633157.1 58773 D 396513 CDS YP_002633158.1 224475552 7551503 59662..61506 1 NC_012121.1 (P38039) Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) (SIR-FP),InterPro: FAD-binding; Hypothetical protein; putative sulfite reductase (NADPH) flavoprotein alpha-component 61506 cysJ 7551503 cysJ Staphylococcus carnosus subsp. carnosus TM300 putative sulfite reductase (NADPH) flavoprotein alpha-component YP_002633158.1 59662 D 396513 CDS YP_002633159.1 224475553 7551505 61530..63239 1 NC_012121.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 63239 cysI 7551505 cysI Staphylococcus carnosus subsp. carnosus TM300 sulfite reductase subunit beta YP_002633159.1 61530 D 396513 CDS YP_002633160.1 224475554 7551504 63264..64037 1 NC_012121.1 (P11098) Siroheme synthase [Includes: Uroporphyrin-III C-methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99,InterPro: Uroporphyrin-III C-methyltransferase C-terminal; Hypothetical protein; putative uroporphyrin-III C-methyltransferase 64037 cysG 7551504 cysG Staphylococcus carnosus subsp. carnosus TM300 putative uroporphyrin-III C-methyltransferase YP_002633160.1 63264 D 396513 CDS YP_002633161.1 224475555 7551502 64197..65099 1 NC_012121.1 (P46490) Hypothetical protein HI0198,pfam01925,DUF81, Domain of unknown function DUF81. This integral membrane protein family has no known function. The alignment appears to contain two duplicated modules of three transmembrane helices.,InterPro: Protein of unknown function DUF81; Hypothetical protein; putative permease 65099 7551502 Sca_0062 Staphylococcus carnosus subsp. carnosus TM300 putative permease YP_002633161.1 64197 D 396513 CDS YP_002633162.1 224475556 7549799 65118..66317 1 NC_012121.1 ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase 66317 sat 7549799 sat Staphylococcus carnosus subsp. carnosus TM300 sulfate adenylyltransferase YP_002633162.1 65118 D 396513 CDS YP_002633163.1 224475557 7551499 66323..66922 1 NC_012121.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 66922 cysC 7551499 cysC Staphylococcus carnosus subsp. carnosus TM300 adenylylsulfate kinase YP_002633163.1 66323 D 396513 CDS YP_002633164.1 224475558 7551498 67060..67842 1 NC_012121.1 (Q48436) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin dehydrogenase) (AR) (Meso-23-butanediol dehydrogenase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; acetoin reductase 67842 7551498 Sca_0065 Staphylococcus carnosus subsp. carnosus TM300 acetoin reductase YP_002633164.1 67060 D 396513 CDS YP_002633165.1 224475559 7549800 complement(67895..68368) 1 NC_012121.1 gi|49242692|emb|CAG41415.1| hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252]; Hypothetical protein; putative thioesterase 68368 fcbC 7549800 fcbC Staphylococcus carnosus subsp. carnosus TM300 putative thioesterase YP_002633165.1 67895 R 396513 CDS YP_002633166.1 224475560 7551564 68712..68879 1 NC_012121.1 Hypothetical protein; hypothetical protein 68879 7551564 Sca_0067 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633166.1 68712 D 396513 CDS YP_002633167.1 224475561 7549801 69022..69606 1 NC_012121.1 Hypothetical protein; putative lipoprotein 69606 7549801 Sca_0068 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633167.1 69022 D 396513 CDS YP_002633168.1 224475562 7549802 70060..71187 1 NC_012121.1 (P42318) Hypothetical protein yxjG,InterPro: Methionine synthase vitamin-B12 independent; Hypothetical protein; putative methionine synthase 71187 metE 7549802 metE Staphylococcus carnosus subsp. carnosus TM300 putative methionine synthase YP_002633168.1 70060 D 396513 CDS YP_002633169.1 224475563 7551778 71424..71747 1 NC_012121.1 (P39044) Hypothetical protein X,InterPro: Transcriptional regulator PadR-like family; Hypothetical protein; putative transcriptional regulator 71747 7551778 Sca_0070 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002633169.1 71424 D 396513 CDS YP_002633170.1 224475564 7549803 71740..72300 1 NC_012121.1 gi|27468839|ref|NP_765476.1| (REFSEQ) gi|27316387|gb|AAO05562.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228]; Hypothetical protein; hypothetical protein 72300 7549803 Sca_0071 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633170.1 71740 D 396513 CDS YP_002633171.1 224475565 7549804 72297..72677 1 NC_012121.1 similarity to N-terminal part (aa 1..111) of gi|27468838|ref|NP_765475.1| hypothetical protein SE1920 [Staphylococcus epidermidis ATCC 12228] Length =267; Hypothetical protein; hypothetical protein 72677 7549804 Sca_0072 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633171.1 72297 D 396513 CDS YP_002633172.1 224475566 7549805 72694..72783 1 NC_012121.1 Hypothetical protein; hypothetical protein 72783 7549805 Sca_0073 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633172.1 72694 D 396513 CDS YP_002633173.1 224475567 7549806 73310..74302 1 NC_012121.1 (Q9WXE6) Chlorohydroquinone/hydroquinone 12-dioxygenase (EC 1.13.11.-) (Hydroquinone meta-cleavage dioxygenase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein; glyoxylase family protein 74302 gloA 7549806 gloA Staphylococcus carnosus subsp. carnosus TM300 glyoxylase family protein YP_002633173.1 73310 D 396513 CDS YP_002633174.1 224475568 7551638 74324..74926 1 NC_012121.1 Hypothetical protein; putative phospholipase/carboxylesterase 74926 7551638 Sca_0075 Staphylococcus carnosus subsp. carnosus TM300 putative phospholipase/carboxylesterase YP_002633174.1 74324 D 396513 CDS YP_002633175.1 224475569 7549807 complement(75001..76146) 1 NC_012121.1 (Q01911) Tetracycline resistance protein from transposon Tn4351/Tn4400,InterPro: Flavoprotein monooxygenase; Hypothetical protein; putative oxidoreductase 76146 7549807 Sca_0076 Staphylococcus carnosus subsp. carnosus TM300 putative oxidoreductase YP_002633175.1 75001 R 396513 CDS YP_002633176.1 224475570 7549808 complement(76430..77134) 1 NC_012121.1 Hypothetical protein; hypothetical protein 77134 7549808 Sca_0077 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633176.1 76430 R 396513 CDS YP_002633177.1 224475571 7549809 complement(77137..77676) 1 NC_012121.1 Hypothetical protein; hypothetical protein 77676 7549809 Sca_0078 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633177.1 77137 R 396513 CDS YP_002633178.1 224475572 7549810 complement(77691..78533) 1 NC_012121.1 Hypothetical protein; hypothetical protein 78533 7549810 Sca_0079 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633178.1 77691 R 396513 CDS YP_002633179.1 224475573 7549811 complement(78530..79054) 1 NC_012121.1 similar to gi|38142387|dbj|BAD00991.1| hypothetical protein [Staphylococcus warneri]; Hypothetical protein; putative DNA binding protein 79054 7549811 Sca_0080 Staphylococcus carnosus subsp. carnosus TM300 putative DNA binding protein YP_002633179.1 78530 R 396513 CDS YP_002633180.1 224475574 7549812 complement(79441..80133) 1 NC_012121.1 gi|17989361|ref|NP_541994.1| (REFSEQ) PROTEASE I [Brucella melitensis 16M],InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein; putative intracellular protease/amidase 80133 7549812 Sca_0081 Staphylococcus carnosus subsp. carnosus TM300 putative intracellular protease/amidase YP_002633180.1 79441 R 396513 CDS YP_002633181.1 224475575 7549813 80762..81262 1 NC_012121.1 (P43984) Hypothetical protein HI0318,InterPro: Isoprenylcysteine carboxyl methyltransferase; Hypothetical protein; hypothetical protein 81262 7549813 Sca_0082 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633181.1 80762 D 396513 CDS YP_002633182.1 224475576 7549814 81388..82122 1 NC_012121.1 (Q06174) Carboxylesterase precursor (EC 3.1.1.1),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; putative esterase/lipase 82122 7549814 Sca_0083 Staphylococcus carnosus subsp. carnosus TM300 putative esterase/lipase YP_002633182.1 81388 D 396513 CDS YP_002633183.1 224475577 7549815 82387..82974 1 NC_012121.1 gi|13309880|gb|AAK18070.1| (GenBank (NCBI Entrez)) IcaR [Staphylococcus caprae],InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein; ica operon transcriptional regulator 82974 7549815 Sca_0084 Staphylococcus carnosus subsp. carnosus TM300 ica operon transcriptional regulator YP_002633183.1 82387 D 396513 CDS YP_002633184.1 224475578 7549816 83302..84636 1 NC_012121.1 (P45320) Hypothetical sodium-dependent transporter HI1690,InterPro: Sodium:neurotransmitter symporter; Hypothetical protein; putative sodium-dependent transporter 84636 7549816 Sca_0085 Staphylococcus carnosus subsp. carnosus TM300 putative sodium-dependent transporter YP_002633184.1 83302 D 396513 CDS YP_002633185.1 224475579 7549817 84836..85732 1 NC_012121.1 (P56067) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase),InterPro: Pyridoxal-5-phosphate-dependent enzyme beta family; Hypothetical protein; Pyridoxal-5'-phosphate-dependent enzyme, beta family 85732 cysM 7549817 cysM Staphylococcus carnosus subsp. carnosus TM300 Pyridoxal-5'-phosphate-dependent enzyme, beta family YP_002633185.1 84836 D 396513 CDS YP_002633186.1 224475580 7551507 85775..86920 1 NC_012121.1 (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS) (O-succinylhomoserine (Thiol)-lyase),InterPro: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; Hypothetical protein; putative Cys/Met metabolism pyridoxal-5'-phosphate dependent enzyme 86920 metC 7551507 metC Staphylococcus carnosus subsp. carnosus TM300 putative Cys/Met metabolism pyridoxal-5'-phosphate dependent enzyme YP_002633186.1 85775 D 396513 CDS YP_002633187.1 224475581 7551776 87078..87698 1 NC_012121.1 Hypothetical protein; putative LysE type translocator 87698 7551776 Sca_0088 Staphylococcus carnosus subsp. carnosus TM300 putative LysE type translocator YP_002633187.1 87078 D 396513 CDS YP_002633188.1 224475582 7549818 complement(87808..88278) 1 NC_012121.1 gi|27314681|gb|AAO03818.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228]; Hypothetical protein; putative thioesterase 88278 7549818 Sca_0089 Staphylococcus carnosus subsp. carnosus TM300 putative thioesterase YP_002633188.1 87808 R 396513 CDS YP_002633189.1 224475583 7549819 complement(88282..89250) 1 NC_012121.1 (Q99KP3) Lambda-crystallin homolog,InterPro: 3-hydroxyacyl-CoA dehydrogenase NAD binding domain; Hypothetical protein; putative 3-hydroxyacyl-CoA dehydrogenase 89250 7549819 Sca_0090 Staphylococcus carnosus subsp. carnosus TM300 putative 3-hydroxyacyl-CoA dehydrogenase YP_002633189.1 88282 R 396513 CDS YP_002633190.1 224475584 7549820 complement(89252..90142) 1 NC_012121.1 Hypothetical protein; hypothetical protein 90142 7549820 Sca_0091 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633190.1 89252 R 396513 CDS YP_002633191.1 224475585 7549821 complement(90262..90795) 1 NC_012121.1 (P17446) HTH-type transcriptional regulator betI,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein; putative transcriptional regulator 90795 7549821 Sca_0092 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002633191.1 90262 R 396513 CDS YP_002633192.1 224475586 7549822 90962..91750 1 NC_012121.1 (O06977) Hypothetical protein yvcN; Belongs to the arylamine N-acetyltransferase family,InterPro: N-acetyltransferase; Hypothetical protein; putative N-acetyltransferase 91750 7549822 Sca_0093 Staphylococcus carnosus subsp. carnosus TM300 putative N-acetyltransferase YP_002633192.1 90962 D 396513 CDS YP_002633193.1 224475587 7549823 complement(91831..94515) 1 NC_012121.1 (Q9KQ30) 5-nucleotidase precursor (EC 3.1.3.5),InterPro: Metallo-phosphoesterase; Hypothetical protein; putative 5'-nucleotidase 94515 7549823 Sca_0094 Staphylococcus carnosus subsp. carnosus TM300 putative 5'-nucleotidase YP_002633193.1 91831 R 396513 CDS YP_002633194.1 224475588 7549824 94983..95999 1 NC_012121.1 putative exported protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49240818|emb|CAG39485.1| putative exported protein [Staphylococcus aureus subsp. aureus MRSA252],InterPro: CHAP; CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of proteins, where is functions as a glutathionylspermidine amidase EC:3.5.1.78.; Hypothetical protein; putative autolysin with LysM domain 95999 7549824 Sca_0095 Staphylococcus carnosus subsp. carnosus TM300 putative autolysin with LysM domain YP_002633194.1 94983 D 396513 CDS YP_002633195.1 224475589 7549825 complement(96104..96400) 1 NC_012121.1 PFAM: Protein of unknown function (DUF1369),InterPro: TPR repeat,No homologs in staphylococcal species; Hypothetical protein; hypothetical protein 96400 7549825 Sca_0096 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633195.1 96104 R 396513 CDS YP_002633196.1 224475590 7549826 96570..96938 1 NC_012121.1 InterPro: NUDIX hydrolase; Hypothetical protein; hypothetical protein 96938 7549826 Sca_0097 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633196.1 96570 D 396513 CDS YP_002633197.1 224475591 7549827 complement(97005..97295) 1 NC_012121.1 No homolog in other staphylococcal species; Hypothetical protein; hypothetical protein 97295 7549827 Sca_0098 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633197.1 97005 R 396513 CDS YP_002633198.1 224475592 7549828 complement(97384..98229) 1 NC_012121.1 InterPro: Patatin; Hypothetical protein; putative esterase of the alpha-beta hydrolase superfamily 98229 7549828 Sca_0099 Staphylococcus carnosus subsp. carnosus TM300 putative esterase of the alpha-beta hydrolase superfamily YP_002633198.1 97384 R 396513 CDS YP_002633199.1 224475593 7549829 complement(98322..98912) 1 NC_012121.1 Hypothetical protein; hypothetical protein 98912 7549829 Sca_0100 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633199.1 98322 R 396513 CDS YP_002633200.1 224475594 7549830 complement(99039..99311) 1 NC_012121.1 Putative membrane protein (TMHMM); Hypothetical protein; hypothetical protein 99311 7549830 Sca_0101 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633200.1 99039 R 396513 CDS YP_002633201.1 224475595 7549831 complement(99422..100213) 1 NC_012121.1 putative membrane protein; Hypothetical protein; hypothetical protein 100213 7549831 Sca_0102 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633201.1 99422 R 396513 CDS YP_002633202.1 224475596 7549832 complement(100210..101322) 1 NC_012121.1 putative membrane protein; Hypothetical protein; hypothetical protein 101322 7549832 Sca_0103 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633202.1 100210 R 396513 CDS YP_002633203.1 224475597 7549833 complement(101542..102426) 1 NC_012121.1 InterPro: LysR substrate binding domain,HTH motif; Hypothetical protein; putative transcription activator of glutamate synthase operon 102426 gltC 7549833 gltC Staphylococcus carnosus subsp. carnosus TM300 putative transcription activator of glutamate synthase operon YP_002633203.1 101542 R 396513 CDS YP_002633204.1 224475598 7551648 102568..107061 1 NC_012121.1 (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13) (NADPH-GOGAT),InterPro: Glutamate synthase amidotransferase domain; Hypothetical protein; glutamate synthase large subunit 107061 gltB 7551648 gltB Staphylococcus carnosus subsp. carnosus TM300 glutamate synthase large subunit YP_002633204.1 102568 D 396513 CDS YP_002633205.1 224475599 7551647 107084..108556 1 NC_012121.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 108556 gltD 7551647 gltD Staphylococcus carnosus subsp. carnosus TM300 glutamate synthase subunit beta YP_002633205.1 107084 D 396513 CDS YP_002633206.1 224475600 7552248 108983..109384 1 NC_012121.1 (Q55595) Probable lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein; putative lyase 109384 7552248 Sca_0107 Staphylococcus carnosus subsp. carnosus TM300 putative lyase YP_002633206.1 108983 D 396513 CDS YP_002633207.1 224475601 7549834 109544..110230 1 NC_012121.1 similar to N-terminal part (aa 1-227) of phosphotransferase system trehalose-specific enzyme IIBC component [Staphylococcus saprophyticus subsp. saprophyticus ATCC (YP_302372): 475 aa,InterPro: Phosphotransferase system PTS EIIB domain; Hypothetical protein; PTS system sugar-specific IIBC component (fragment 1) 110230 7549834 Sca_0108 Staphylococcus carnosus subsp. carnosus TM300 PTS system sugar-specific IIBC component (fragment 1) YP_002633207.1 109544 D 396513 CDS YP_002633208.1 224475602 7549835 110297..110971 1 NC_012121.1 similar to C-terminal part (aa 229-474) of phosphotransferase system trehalose-specific enzyme IIBC component [Staphylococcus saprophyticus subsp. saprophyticus ATCC (YP_302372): 475 aa; Hypothetical protein; PTS system sugar-specific IIBC component (fragment 2) 110971 7549835 Sca_0109 Staphylococcus carnosus subsp. carnosus TM300 PTS system sugar-specific IIBC component (fragment 2) YP_002633208.1 110297 D 396513 CDS YP_002633209.1 224475603 7549836 111107..112744 1 NC_012121.1 (P39795) Trehalose-6-phosphate hydrolase (EC 3.2.1.93) (Alphaalpha-phosphotrehalase),InterPro: Alpha amylase catalytic domain,Alpha amylase catalytic subdomain; Hypothetical protein; trehalose-6-phosphate hydrolase 112744 treC 7549836 treC Staphylococcus carnosus subsp. carnosus TM300 trehalose-6-phosphate hydrolase YP_002633209.1 111107 D 396513 CDS YP_002633210.1 224475604 7552197 112771..113493 1 NC_012121.1 (P39796) Trehalose operon transcriptional repressor,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein; putative trehalose operon transcriptional regulator 113493 7552197 Sca_0111 Staphylococcus carnosus subsp. carnosus TM300 putative trehalose operon transcriptional regulator YP_002633210.1 112771 D 396513 CDS YP_002633211.1 224475605 7549837 113623..113898 1 NC_012121.1 (P30338) Arsenical resistance operon repressor,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein; ArsR family transcription regulator 113898 7549837 Sca_0113 Staphylococcus carnosus subsp. carnosus TM300 ArsR family transcription regulator YP_002633211.1 113623 D 396513 CDS YP_002633212.1 224475606 7549838 113912..114583 1 NC_012121.1 Hypothetical protein; hypothetical protein 114583 7549838 Sca_0114 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633212.1 113912 D 396513 CDS YP_002633213.1 224475607 7549839 complement(115096..116004) 1 NC_012121.1 (P37499) Putative HTH-type transcriptional regulator yybE,InterPro: LysR substrate binding domain; Hypothetical protein; LysR family transcriptional regulator 116004 7549839 Sca_0115 Staphylococcus carnosus subsp. carnosus TM300 LysR family transcriptional regulator YP_002633213.1 115096 R 396513 CDS YP_002633214.1 224475608 7549840 116135..117325 1 NC_012121.1 TMHMM: TMHelix ,InterPro: General substrate transporter; Hypothetical protein; putative transporter protein 117325 7549840 Sca_0116 Staphylococcus carnosus subsp. carnosus TM300 putative transporter protein YP_002633214.1 116135 D 396513 CDS YP_002633215.1 224475609 7549841 complement(117369..117575) 1 NC_012121.1 Hypothetical protein; hypothetical protein 117575 7549841 Sca_0117 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633215.1 117369 R 396513 CDS YP_002633216.1 224475610 7549842 117812..118336 1 NC_012121.1 (P39368) Hypothetical acetyltransferase yjhQ (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative GNAT family acetyltransferase 118336 7549842 Sca_0118 Staphylococcus carnosus subsp. carnosus TM300 putative GNAT family acetyltransferase YP_002633216.1 117812 D 396513 CDS YP_002633217.1 224475611 7549843 118417..120168 1 NC_012121.1 (P09122) DNA polymerase III subunit gamma/tau (EC 2.7.7.7),InterPro: AAA ATPase central region; Hypothetical protein; DNA polymerase III gamma and tau subunits 120168 dnaX 7549843 dnaX Staphylococcus carnosus subsp. carnosus TM300 DNA polymerase III gamma and tau subunits YP_002633217.1 118417 D 396513 CDS YP_002633218.1 224475612 7551538 120372..120689 1 NC_012121.1 (P17577) Hypothetical UPF0133 protein ybaB,InterPro: Conserved hypothetical protein 103; Hypothetical protein; hypothetical protein 120689 7551538 Sca_0120 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633218.1 120372 D 396513 CDS YP_002633219.1 224475613 7549844 120696..121292 1 NC_012121.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 121292 recR 7549844 recR Staphylococcus carnosus subsp. carnosus TM300 recombination protein RecR YP_002633219.1 120696 D 396513 CDS YP_002633220.1 224475614 7551353 126795..128144 1 NC_012121.1 InterPro: Orn/Lys/Arg decarboxylase major region; Hypothetical protein; putative Orn/Lys/Arg decarboxylase 128144 7551353 Sca_0122 Staphylococcus carnosus subsp. carnosus TM300 putative Orn/Lys/Arg decarboxylase YP_002633220.1 126795 D 396513 CDS YP_002633221.1 224475615 7549845 128146..128760 1 NC_012121.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 128760 tmk 7549845 tmk Staphylococcus carnosus subsp. carnosus TM300 thymidylate kinase YP_002633221.1 128146 D 396513 CDS YP_002633222.1 224475616 7552191 128971..129300 1 NC_012121.1 (P37538) Hypothetical protein yaaQ; Hypothetical protein; hypothetical protein 129300 7552191 Sca_0124 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633222.1 128971 D 396513 CDS YP_002633223.1 224475617 7549846 129474..130400 1 NC_012121.1 (P37540) DNA polymerase III delta subunit (EC 2.7.7.7),InterPro: Replication factor C conserved domain; Hypothetical protein; putative DNA polymerase III, delta' subunit 130400 holB 7549846 holB Staphylococcus carnosus subsp. carnosus TM300 putative DNA polymerase III, delta' subunit YP_002633223.1 129474 D 396513 CDS YP_002633224.1 224475618 7551700 130401..131207 1 NC_012121.1 (P37541) Hypothetical protein yaaT,InterPro: PSP1 C-terminal conserved region; Hypothetical protein; hypothetical protein 131207 7551700 Sca_0126 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633224.1 130401 D 396513 CDS YP_002633225.1 224475619 7549847 131222..131611 1 NC_012121.1 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 131611 7549847 Sca_0127 Staphylococcus carnosus subsp. carnosus TM300 DNA replication intiation control protein YabA YP_002633225.1 131222 D 396513 CDS YP_002633226.1 224475620 7549848 131700..132491 1 NC_012121.1 (P37543) Hypothetical protein yabB,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein; hypothetical protein 132491 7549848 Sca_0128 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633226.1 131700 D 396513 CDS YP_002633227.1 224475621 7549849 132481..132741 1 NC_012121.1 (Q9KLK4) Hypothetical UPF0213 protein VCA0739,InterPro: Excinuclease ABC C subunit N-terminal; Hypothetical protein; putative nuclease 132741 7549849 Sca_0129 Staphylococcus carnosus subsp. carnosus TM300 putative nuclease YP_002633227.1 132481 D 396513 CDS YP_002633228.1 224475622 7549850 132738..133577 1 NC_012121.1 (Q9KGL2) Hypothetical UPF0011 protein BH0049,InterPro: Protein of unknown function UPF0011; Hypothetical protein; tetrapyrrole methylase 133577 7549850 Sca_0130 Staphylococcus carnosus subsp. carnosus TM300 tetrapyrrole methylase YP_002633228.1 132738 D 396513 CDS YP_002633229.1 224475623 7549851 133755..135101 1 NC_012121.1 (P10335) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),InterPro: YSIRK Gram-positive signal peptide,Fragment 1 and 2 (Sca_0132) are similar to N- and C-terminal part of lipase gene gehWC of S. warneri (BAD90561).; Hypothetical protein; lipase (fragment 1) 135101 geh' 7549851 geh' Staphylococcus carnosus subsp. carnosus TM300 lipase (fragment 1) YP_002633229.1 133755 D 396513 CDS YP_002633230.1 224475624 7551622 135326..136129 1 NC_012121.1 (Q02510) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),Fragment 1 (Sca_0131) and 2 are similar to N- and C-terminal part of lipase gene gehWC of S. warneri (BAD90561).; Hypothetical protein; lipase (fragment 2) 136129 geh'' 7551622 geh'' Staphylococcus carnosus subsp. carnosus TM300 lipase (fragment 2) YP_002633230.1 135326 D 396513 CDS YP_002633231.1 224475625 7551623 137310..138026 1 NC_012121.1 TMHMM: TM helix; Hypothetical protein; hypothetical protein 138026 7551623 Sca_0133 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633231.1 137310 D 396513 CDS YP_002633232.1 224475626 7549852 138076..138171 1 NC_012121.1 Hypothetical protein; hypothetical protein 138171 7549852 Sca_0134 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633232.1 138076 D 396513 CDS YP_002633233.1 224475627 7549853 138156..138392 1 NC_012121.1 Hypothetical protein; hypothetical protein 138392 7549853 Sca_0135 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633233.1 138156 D 396513 CDS YP_002633234.1 224475628 7549854 138389..138865 1 NC_012121.1 TMHMM: TM helix,According to BlastX comparison,this ORF could be elongated by about 40aa encoded by adjacent frame-shifted ORF.; Hypothetical protein; hypothetical protein 138865 7549854 Sca_0136 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633234.1 138389 D 396513 CDS YP_002633235.1 224475629 7549855 139012..139383 1 NC_012121.1 Hypothetical protein; hypothetical protein 139383 7549855 Sca_0137 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633235.1 139012 D 396513 CDS YP_002633236.1 224475630 7549856 139741..140397 1 NC_012121.1 (P26946) Hypothetical ABC transporter ATP-binding protein,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 140397 7549856 Sca_0138 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002633236.1 139741 D 396513 CDS YP_002633237.1 224475631 7549857 140407..141084 1 NC_012121.1 Hypothetical protein; putative ABC transporter permease 141084 7549857 Sca_0139 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002633237.1 140407 D 396513 CDS YP_002633238.1 224475632 7549858 141353..143356 1 NC_012121.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 143356 metS 7549858 metS Staphylococcus carnosus subsp. carnosus TM300 methionyl-tRNA synthetase YP_002633238.1 141353 D 396513 CDS YP_002633239.1 224475633 7551781 143564..144337 1 NC_012121.1 (P37545) Putative deoxyribonuclease yabD (EC 3.1.21.-),InterPro: TatD-related deoxyribonuclease; Hypothetical protein; putative TatD-related deoxyribonuclease 144337 7551781 Sca_0141 Staphylococcus carnosus subsp. carnosus TM300 putative TatD-related deoxyribonuclease YP_002633239.1 143564 D 396513 CDS YP_002633240.1 224475634 7549859 145136..145687 1 NC_012121.1 (P37547) Hypothetical protein yabF,InterPro: Primase-related protein,contains helix-turn-helix motif; Hypothetical protein; putative Primase-like protein 145687 7549859 Sca_0142 Staphylococcus carnosus subsp. carnosus TM300 putative Primase-like protein YP_002633240.1 145136 D 396513 CDS YP_002633241.1 224475635 7549860 145689..146579 1 NC_012121.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 146579 ksgA 7549860 ksgA Staphylococcus carnosus subsp. carnosus TM300 dimethyladenosine transferase YP_002633241.1 145689 D 396513 CDS YP_002633242.1 224475636 7549861 146679..146942 1 NC_012121.1 (P37466) Veg protein; Hypothetical protein; hypothetical protein 146942 7549861 Sca_0144 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633242.1 146679 D 396513 CDS YP_002633243.1 224475637 7549862 147402..148172 1 NC_012121.1 (Q8CQU6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) (CMK) (4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase),InterPro: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Hypothetical protein; GHMP kinase family protein 148172 7549862 Sca_0145 Staphylococcus carnosus subsp. carnosus TM300 GHMP kinase family protein YP_002633243.1 147402 D 396513 CDS YP_002633244.1 224475638 7549863 148189..149013 1 NC_012121.1 (P37551) Pur operon repressor,InterPro: Phosphoribosyltransferase; Hypothetical protein; pur operon repressor 149013 purR 7549863 purR Staphylococcus carnosus subsp. carnosus TM300 pur operon repressor YP_002633244.1 148189 D 396513 CDS YP_002633245.1 224475639 7551983 149032..149412 1 NC_012121.1 (P37552) UPF0076 protein yabJ (purine regulatory protein),InterPro: YjgF-like protein,Interpro: Endoribonuclease L-PSP; Hypothetical protein; putative purine regulatory protein 149412 7551983 Sca_0147 Staphylococcus carnosus subsp. carnosus TM300 putative purine regulatory protein YP_002633245.1 149032 D 396513 CDS YP_002633246.1 224475640 7549864 149479..149802 1 NC_012121.1 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 149802 spoVG 7549864 spoVG Staphylococcus carnosus subsp. carnosus TM300 regulatory protein SpoVG YP_002633246.1 149479 D 396513 CDS YP_002633247.1 224475641 7552140 150051..151415 1 NC_012121.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 151415 glmU 7552140 glmU Staphylococcus carnosus subsp. carnosus TM300 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_002633247.1 150051 D 396513 CDS YP_002633248.1 224475642 7551614 151519..152484 1 NC_012121.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 152484 prs 7551614 prs Staphylococcus carnosus subsp. carnosus TM300 ribose-phosphate pyrophosphokinase YP_002633248.1 151519 D 396513 CDS YP_002633249.1 224475643 7551963 152742..153386 1 NC_012121.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 153386 rplY 7551963 rplY Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L25/general stress protein Ctc YP_002633249.1 152742 D 396513 CDS YP_002633250.1 224475644 7552061 153873..154445 1 NC_012121.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 154445 pth 7552061 pth Staphylococcus carnosus subsp. carnosus TM300 peptidyl-tRNA hydrolase YP_002633250.1 153873 D 396513 CDS YP_002633251.1 224475645 7551968 154442..157960 1 NC_012121.1 (P37474) Transcription-repair coupling factor (TRCF),InterPro: Transcription-repair coupling factor; Hypothetical protein; putative transcription-repair coupling factor 157960 mfd 7551968 mfd Staphylococcus carnosus subsp. carnosus TM300 putative transcription-repair coupling factor YP_002633251.1 154442 D 396513 CDS YP_002633252.1 224475646 7551782 157950..159488 1 NC_012121.1 (P37555) Hypothetical protein yabM,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein; putative polysaccharide biosynthesis protein 159488 7551782 Sca_0154 Staphylococcus carnosus subsp. carnosus TM300 putative polysaccharide biosynthesis protein YP_002633252.1 157950 D 396513 CDS YP_002633253.1 224475647 7549865 159485..160681 1 NC_012121.1 InterPro: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase,InterPro: MazG family protein; Hypothetical protein; MazG-like domain-containing protein 160681 7549865 Sca_0155 Staphylococcus carnosus subsp. carnosus TM300 MazG-like domain-containing protein YP_002633253.1 159485 D 396513 CDS YP_002633254.1 224475648 7549866 160683..160949 1 NC_012121.1 InterPro: RNA-binding S4; Hypothetical protein; hypothetical protein 160949 7549866 Sca_0156 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633254.1 160683 D 396513 CDS YP_002633255.1 224475649 7549867 160951..161217 1 NC_012121.1 (P37557) Hypothetical protein yabO,InterPro: RNA-binding S4; Hypothetical protein; protein with S4 domain 161217 7549867 Sca_0157 Staphylococcus carnosus subsp. carnosus TM300 protein with S4 domain YP_002633255.1 160951 D 396513 CDS YP_002633256.1 224475650 7549868 161232..161603 1 NC_012121.1 (P37471) Cell division protein divIC,InterPro: Septum formation initiator; Hypothetical protein; putative cell division protein 161603 7549868 Sca_0158 Staphylococcus carnosus subsp. carnosus TM300 putative cell division protein YP_002633256.1 161232 D 396513 CDS YP_002633257.1 224475651 7549869 161738..162148 1 NC_012121.1 (P37560) Hypothetical protein yabR,InterPro: RNA binding S1; Hypothetical protein; hypothetical protein 162148 7549869 Sca_0159 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633257.1 161738 D 396513 CDS YP_002633258.1 224475652 7549870 162400..163680 1 NC_012121.1 (P37563) Hypothetical UPF0072 protein yacA,InterPro: Protein of unknown function UPF0021,Pfam: PP-loop family; Hypothetical protein; putative PP-loop family protein 163680 7549870 Sca_0160 Staphylococcus carnosus subsp. carnosus TM300 putative PP-loop family protein YP_002633258.1 162400 D 396513 CDS YP_002633259.1 224475653 7549871 163683..164228 1 NC_012121.1 (Q8CQV4) Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) (HGPRT) (HGPRTase),InterPro: Hypoxanthine phosphoribosyl transferase; Hypothetical protein; putative hypoxanthine-guanine phosphoribosyltransferase 164228 hpt 7549871 hpt Staphylococcus carnosus subsp. carnosus TM300 putative hypoxanthine-guanine phosphoribosyltransferase YP_002633259.1 163683 D 396513 CDS YP_002633260.1 224475654 7551703 164345..166447 1 NC_012121.1 (P37476) Cell division protein ftsH homolog (EC 3.4.24.-),InterPro: ATP-dependent metalloprotease FtsH; Hypothetical protein; ATP-dependent metalloprotease FtsH 166447 ftsH 7551703 ftsH Staphylococcus carnosus subsp. carnosus TM300 ATP-dependent metalloprotease FtsH YP_002633260.1 164345 D 396513 CDS YP_002633261.1 224475655 7551596 166601..167485 1 NC_012121.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 167485 hslO 7551596 hslO Staphylococcus carnosus subsp. carnosus TM300 Hsp33-like chaperonin YP_002633261.1 166601 D 396513 CDS YP_002633262.1 224475656 7551707 167770..168705 1 NC_012121.1 (Q8CMT6) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase),InterPro: Cysteine synthase K/M,Cysteine synthase K; Hypothetical protein; cysteine synthase 168705 cysK 7551707 cysK Staphylococcus carnosus subsp. carnosus TM300 cysteine synthase YP_002633262.1 167770 D 396513 CDS YP_002633263.1 224475657 7551506 168847..169632 1 NC_012121.1 (Q8NXZ2) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase) (DHPS),InterPro: Dihydropteroate synthase; Hypothetical protein; dihydropteroate synthase chain A synthetase 169632 folP 7551506 folP Staphylococcus carnosus subsp. carnosus TM300 dihydropteroate synthase chain A synthetase YP_002633263.1 168847 D 396513 CDS YP_002633264.1 224475658 7551590 169629..170003 1 NC_012121.1 (Q8CMT8) Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA),InterPro: Dihydroneopterin aldolase; Hypothetical protein; 7,8-dihydroneopterin aldolase 170003 folB 7551590 folB Staphylococcus carnosus subsp. carnosus TM300 7,8-dihydroneopterin aldolase YP_002633264.1 169629 D 396513 CDS YP_002633265.1 224475659 7551585 169996..170478 1 NC_012121.1 Hypothetical protein; 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokin a se 170478 folK 7551585 folK Staphylococcus carnosus subsp. carnosus TM300 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokin a se YP_002633265.1 169996 D 396513 CDS YP_002633266.1 224475660 7551589 170502..171497 1 NC_012121.1 (P37567) Probable tRNA-dihydrouridine synthase 1 (EC 1.-.-.-),InterPro: Putative TIM-barrel protein nifR3; Hypothetical protein; putative tRNA-dihydrouridine synthase 1 171497 dus1 7551589 dus1 Staphylococcus carnosus subsp. carnosus TM300 putative tRNA-dihydrouridine synthase 1 YP_002633266.1 170502 D 396513 CDS YP_002633267.1 224475661 7551543 171510..173003 1 NC_012121.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 173003 lysS 7551543 lysS Staphylococcus carnosus subsp. carnosus TM300 lysyl-tRNA synthetase YP_002633267.1 171510 D 396513 CDS YP_002633268.1 224475662 7551354 complement(179440..180606) 1 NC_012121.1 (P77389) Hypothetical transport protein ydhP,InterPro: Major facilitator superfamily; Hypothetical protein; putative sugar transport protein 180606 7551354 Sca_0170 Staphylococcus carnosus subsp. carnosus TM300 putative sugar transport protein YP_002633268.1 179440 R 396513 CDS YP_002633269.1 224475663 7549872 complement(180835..181314) 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative GNAT family acetyltransferase 181314 7549872 Sca_0171 Staphylococcus carnosus subsp. carnosus TM300 putative GNAT family acetyltransferase YP_002633269.1 180835 R 396513 CDS YP_002633270.1 224475664 7549873 complement(181329..182699) 1 NC_012121.1 (P49309) Probable rhizopine catabolism regulatory protein mocR,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein; GntR family transcriptional regulator 182699 7549873 Sca_0172 Staphylococcus carnosus subsp. carnosus TM300 GntR family transcriptional regulator YP_002633270.1 181329 R 396513 CDS YP_002633271.1 224475665 7549874 182797..183684 1 NC_012121.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 183684 pdx1 7549874 pdx1 Staphylococcus carnosus subsp. carnosus TM300 pyridoxal biosynthesis lyase PdxS YP_002633271.1 182797 D 396513 CDS YP_002633272.1 224475666 7551921 183686..184264 1 NC_012121.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 184264 7551921 Sca_0174 Staphylococcus carnosus subsp. carnosus TM300 glutamine amidotransferase subunit PdxT YP_002633272.1 183686 D 396513 CDS YP_002633273.1 224475667 7549875 complement(184294..184791) 1 NC_012121.1 (Q47158) Hypothetical acetyltransferase yafP (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative GNAT family acetyltransferase 184791 7549875 Sca_0175 Staphylococcus carnosus subsp. carnosus TM300 putative GNAT family acetyltransferase YP_002633273.1 184294 R 396513 CDS YP_002633274.1 224475668 7549876 complement(184812..185255) 1 NC_012121.1 Hypothetical protein; hypothetical protein 185255 7549876 Sca_0176 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633274.1 184812 R 396513 CDS YP_002633275.1 224475669 7549877 complement(185426..186637) 1 NC_012121.1 (O00337) Sodium/nucleoside cotransporter 1 (Na(+)/nucleoside cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Concentrative nucleoside transporter 1) (CNT 1) (hCNT1),InterPro: Na+ dependent nucleoside transporter,TMHMM: TM helix; Hypothetical protein; pyrimidine nucleoside transport protein 186637 nupC 7549877 nupC Staphylococcus carnosus subsp. carnosus TM300 pyrimidine nucleoside transport protein YP_002633275.1 185426 R 396513 CDS YP_002633276.1 224475670 7551872 186810..187271 1 NC_012121.1 (P37568) Transcriptional regulator ctsR,InterPro: Firmicute transcriptional repressor of class III stress genes,contains helix turn helix motif; Hypothetical protein; transcription repressor of class III stress genes 187271 ctsR 7551872 ctsR Staphylococcus carnosus subsp. carnosus TM300 transcription repressor of class III stress genes YP_002633276.1 186810 D 396513 CDS YP_002633277.1 224475671 7551490 187290..187814 1 NC_012121.1 Hypothetical protein; hypothetical protein 187814 7551490 Sca_0179 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633277.1 187290 D 396513 CDS YP_002633278.1 224475672 7549878 187819..188823 1 NC_012121.1 (Q8CTU5) Hypothetical ATP:guanido phosphotransferase SE0286 (EC 2.7.3.-),InterPro: ATP:guanido phosphotransferase; Hypothetical protein; ATP:guanido phosphotransferase 188823 7549878 Sca_0180 Staphylococcus carnosus subsp. carnosus TM300 ATP:guanido phosphotransferase YP_002633278.1 187819 D 396513 CDS YP_002633279.1 224475673 7549879 188835..191300 1 NC_012121.1 (P37571) Negative regulator of genetic competence clpC/mecB,InterPro: AAA ATPase central region; Hypothetical protein; ClpC ATPase family protein 191300 clpC 7549879 clpC Staphylococcus carnosus subsp. carnosus TM300 ClpC ATPase family protein YP_002633279.1 188835 D 396513 CDS YP_002633280.1 224475674 7551473 191563..192933 1 NC_012121.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 192933 radA 7551473 radA Staphylococcus carnosus subsp. carnosus TM300 DNA repair protein RadA YP_002633280.1 191563 D 396513 CDS YP_002633281.1 224475675 7552006 192964..194022 1 NC_012121.1 (Q06754) Hypothetical protein yacL,InterPro: PilT protein N-terminal; Hypothetical protein; putative membrane domain of (PIN domain superfamily) 194022 7552006 Sca_0183 Staphylococcus carnosus subsp. carnosus TM300 putative membrane domain of (PIN domain superfamily) YP_002633281.1 192964 D 396513 CDS YP_002633282.1 224475676 7549880 194316..195770 1 NC_012121.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 195770 gltX 7549880 gltX Staphylococcus carnosus subsp. carnosus TM300 glutamyl-tRNA synthetase YP_002633282.1 194316 D 396513 CDS YP_002633283.1 224475677 7551651 196061..196702 1 NC_012121.1 (Q8CTU2) Serine acetyltransferase (EC 2.3.1.30) (SAT),InterPro: Serine O-acetyltransferase; Hypothetical protein; serine acetyltransferase 196702 cysE 7551651 cysE Staphylococcus carnosus subsp. carnosus TM300 serine acetyltransferase YP_002633283.1 196061 D 396513 CDS YP_002633284.1 224475678 7551501 196686..198086 1 NC_012121.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 198086 cysS 7551501 cysS Staphylococcus carnosus subsp. carnosus TM300 cysteinyl-tRNA synthetase YP_002633284.1 196686 D 396513 CDS YP_002633285.1 224475679 7551508 198079..198480 1 NC_012121.1 (Q05370) Hypothetical 16.3 kDa protein in atpI 5region (URF4),InterPro: Uncharacterised conserved protein UCP005520; Hypothetical protein; hypothetical protein 198480 7551508 Sca_0187 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633285.1 198079 D 396513 CDS YP_002633286.1 224475680 7549881 198480..199229 1 NC_012121.1 (Q06753) Hypothetical tRNA/rRNA methyltransferase yacO (EC 2.1.1.-),InterPro: RNA methyltransferase TrmH group 3; Hypothetical protein; putative rRNA methyltransferase 199229 spoU 7549881 spoU Staphylococcus carnosus subsp. carnosus TM300 putative rRNA methyltransferase YP_002633286.1 198480 D 396513 CDS YP_002633287.1 224475681 7552139 199233..199757 1 NC_012121.1 (P37574) Hypothetical protein yacP; Hypothetical protein; hypothetical protein 199757 7552139 Sca_0189 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633287.1 199233 D 396513 CDS YP_002633288.1 224475682 7549882 199829..200413 1 NC_012121.1 (P17869) RNA polymerase sigma-H factor (Sigma-30),InterPro: Sigma-70 region 2; Hypothetical protein; putative RNA polymerase sigma-H factor 200413 sigH 7549882 sigH Staphylococcus carnosus subsp. carnosus TM300 putative RNA polymerase sigma-H factor YP_002633288.1 199829 D 396513 CDS YP_002633289.1 224475683 7552131 200720..200917 1 NC_012121.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 200917 secE 7552131 secE Staphylococcus carnosus subsp. carnosus TM300 preprotein translocase subunit SecE YP_002633289.1 200720 D 396513 CDS YP_002633290.1 224475684 7552122 200938..201486 1 NC_012121.1 Hypothetical protein; transcription antitermination protein 201486 nusG 7552122 nusG Staphylococcus carnosus subsp. carnosus TM300 transcription antitermination protein YP_002633290.1 200938 D 396513 CDS YP_002633291.1 224475685 7551875 201669..202091 1 NC_012121.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 202091 rplK 7551875 rplK Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L11 YP_002633291.1 201669 D 396513 CDS YP_002633292.1 224475686 7552048 202297..202992 1 NC_012121.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 202992 rplA 7552048 rplA Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L1 YP_002633292.1 202297 D 396513 CDS YP_002633293.1 224475687 7552040 203332..203832 1 NC_012121.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 203832 rplJ 7552040 rplJ Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L10 YP_002633293.1 203332 D 396513 CDS YP_002633294.1 224475688 7552047 203873..204238 1 NC_012121.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 204238 rplL 7552047 rplL Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L7/L12 YP_002633294.1 203873 D 396513 CDS YP_002633295.1 224475689 7552049 204499..205104 1 NC_012121.1 (P37872) Hypothetical protein ybxB (P23) (ORF23),InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein; putative rRNA methylase 205104 7552049 Sca_0197 Staphylococcus carnosus subsp. carnosus TM300 putative rRNA methylase YP_002633295.1 204499 D 396513 CDS YP_002633296.1 224475690 7549883 complement(205159..205296) 1 NC_012121.1 Hypothetical protein; hypothetical protein 205296 7549883 Sca_0198 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633296.1 205159 R 396513 CDS YP_002633297.1 224475691 7549884 205325..208876 1 NC_012121.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 208876 rpoB 7549884 rpoB Staphylococcus carnosus subsp. carnosus TM300 DNA-directed RNA polymerase subunit beta YP_002633297.1 205325 D 396513 CDS YP_002633298.1 224475692 7552073 209058..212696 1 NC_012121.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 212696 rpoC 7552073 rpoC Staphylococcus carnosus subsp. carnosus TM300 DNA-directed RNA polymerase subunit beta' YP_002633298.1 209058 D 396513 CDS YP_002633299.1 224475693 7552074 212879..213043 1 NC_012121.1 TMHMM: TM helix; Hypothetical protein; hypothetical protein 213043 7552074 Sca_0201 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633299.1 212879 D 396513 CDS YP_002633300.1 224475694 7549885 213019..213201 1 NC_012121.1 Hypothetical protein; hypothetical protein 213201 7549885 Sca_0202 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633300.1 213019 D 396513 CDS YP_002633301.1 224475695 7549886 213403..213657 1 NC_012121.1 in Bacillus subtilis this non-essential protein associates with the ribosome; putative ribosomal protein L7Ae-like 213657 7549886 Sca_0203 Staphylococcus carnosus subsp. carnosus TM300 putative ribosomal protein L7Ae-like YP_002633301.1 213403 D 396513 CDS YP_002633302.1 224475696 7549887 213753..214166 1 NC_012121.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 214166 rpsL 7549887 rpsL Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S12 YP_002633302.1 213753 D 396513 CDS YP_002633303.1 224475697 7552085 214237..214707 1 NC_012121.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 214707 rpsG 7552085 rpsG Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S7 YP_002633303.1 214237 D 396513 CDS YP_002633304.1 224475698 7552080 214821..216902 1 NC_012121.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 216902 fusA 7552080 fusA Staphylococcus carnosus subsp. carnosus TM300 elongation factor G YP_002633304.1 214821 D 396513 CDS YP_002633305.1 224475699 7551602 217092..218279 1 NC_012121.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 218279 tufA 7551602 tufA Staphylococcus carnosus subsp. carnosus TM300 elongation factor Tu YP_002633305.1 217092 D 396513 CDS YP_002633306.1 224475700 7552273 complement(218561..219577) 1 NC_012121.1 (P37112) N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) (L-aminoacylase),InterPro: Peptidase M20/M25/M40; Hypothetical protein; putative peptidase 219577 7552273 Sca_0208 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase YP_002633306.1 218561 R 396513 CDS YP_002633307.1 224475701 7549888 219773..220960 1 NC_012121.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 220960 kbl 7549888 kbl Staphylococcus carnosus subsp. carnosus TM300 2-amino-3-ketobutyrate coenzyme A ligase YP_002633307.1 219773 D 396513 CDS YP_002633308.1 224475702 7551727 complement(221074..222072) 1 NC_012121.1 (P54948) Hypothetical protein yxeI,InterPro: Choloylglycine hydrolase; Hypothetical protein; Choloylglycine hydrolase family protein 222072 7551727 Sca_0210 Staphylococcus carnosus subsp. carnosus TM300 Choloylglycine hydrolase family protein YP_002633308.1 221074 R 396513 CDS YP_002633309.1 224475703 7549889 222170..222673 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative GNAT family acetyltransferase 222673 7549889 Sca_0211 Staphylococcus carnosus subsp. carnosus TM300 putative GNAT family acetyltransferase YP_002633309.1 222170 D 396513 CDS YP_002633310.1 224475704 7549890 222688..223149 1 NC_012121.1 (Q58604) Hypothetical acetyltransferase MJ1207 (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative GNAT family acetyltransferase 223149 7549890 Sca_0212 Staphylococcus carnosus subsp. carnosus TM300 putative GNAT family acetyltransferase YP_002633310.1 222688 D 396513 CDS YP_002633311.1 224475705 7549891 223359..224321 1 NC_012121.1 (P44094) Hypothetical protein HI1014; Hypothetical protein; NAD dependent epimerase/dehydratase family protein 224321 7549891 Sca_0213 Staphylococcus carnosus subsp. carnosus TM300 NAD dependent epimerase/dehydratase family protein YP_002633311.1 223359 D 396513 CDS YP_002633312.1 224475706 7549892 224510..225547 1 NC_012121.1 (O31020) Hypothetical protein VCA0337,InterPro: Protein of unknow function UPF0094; Hypothetical protein; LD-carboxypeptidase family protein 225547 7549892 Sca_0214 Staphylococcus carnosus subsp. carnosus TM300 LD-carboxypeptidase family protein YP_002633312.1 224510 D 396513 CDS YP_002633313.1 224475707 7549893 225769..226848 1 NC_012121.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 226848 ilvE 7549893 ilvE Staphylococcus carnosus subsp. carnosus TM300 branched-chain amino acid aminotransferase YP_002633313.1 225769 D 396513 CDS YP_002633314.1 224475708 7551718 227003..227392 1 NC_012121.1 (P45808) Hypothetical protein ybaN,InterPro: Protein of unknown function DUF454; Hypothetical protein; hypothetical protein 227392 7551718 Sca_0216 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633314.1 227003 D 396513 CDS YP_002633315.1 224475709 7549894 227536..228255 1 NC_012121.1 (Q8DCT7) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGP),InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein; putative haloacid dehalogenase-like hydrolase 228255 7549894 Sca_0217 Staphylococcus carnosus subsp. carnosus TM300 putative haloacid dehalogenase-like hydrolase YP_002633315.1 227536 D 396513 CDS YP_002633316.1 224475710 7549895 228296..228703 1 NC_012121.1 Hypothetical protein; hypothetical protein 228703 7549895 Sca_0218 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633316.1 228296 D 396513 CDS YP_002633317.1 224475711 7549896 228726..229544 1 NC_012121.1 (P44447) Protein HI0003,InterPro: HAD-superfamily hydrolase subfamily IIB; Hypothetical protein; HAD superfamily hydrolase 229544 7549896 Sca_0219 Staphylococcus carnosus subsp. carnosus TM300 HAD superfamily hydrolase YP_002633317.1 228726 D 396513 CDS YP_002633318.1 224475712 7549897 complement(229586..230248) 1 NC_012121.1 (P37529) Hypothetical protein yaaF,InterPro: Deoxynucleoside kinase; Hypothetical protein; putative deoxynucleoside kinase 230248 7549897 Sca_0220 Staphylococcus carnosus subsp. carnosus TM300 putative deoxynucleoside kinase YP_002633318.1 229586 R 396513 CDS YP_002633319.1 224475713 7549898 complement(230241..230858) 1 NC_012121.1 (P37530) Hypothetical protein yaaG,InterPro: Deoxynucleoside kinase; Hypothetical protein; putative deoxynucleoside kinase 230858 7549898 Sca_0221 Staphylococcus carnosus subsp. carnosus TM300 putative deoxynucleoside kinase YP_002633319.1 230241 R 396513 CDS YP_002633320.1 224475714 7549899 230924..231403 1 NC_012121.1 (P30134) Hypothetical protein yfhC,InterPro: Cytidine/deoxycytidylate deaminase zinc-binding region; Hypothetical protein; putative deaminase 231403 7549899 Sca_0222 Staphylococcus carnosus subsp. carnosus TM300 putative deaminase YP_002633320.1 230924 D 396513 CDS YP_002633321.1 224475715 7549900 231618..232496 1 NC_012121.1 (P42962) Hypothetical protein ycsE,InterPro: Cof protein; Hypothetical protein; putative haloacid dehalogenase-like hydrolase 232496 7549900 Sca_0223 Staphylococcus carnosus subsp. carnosus TM300 putative haloacid dehalogenase-like hydrolase YP_002633321.1 231618 D 396513 CDS YP_002633322.1 224475716 7549901 232563..233129 1 NC_012121.1 (O31038) FMN reductase (EC 1.5.1.29),InterPro: NADPH-dependent FMN reductase; Hypothetical protein; putative flavoprotein 233129 7549901 Sca_0224 Staphylococcus carnosus subsp. carnosus TM300 putative flavoprotein YP_002633322.1 232563 D 396513 CDS YP_002633323.1 224475717 7549902 complement(233277..233822) 1 NC_012121.1 (P42404) Hypothetical protein yckF,InterPro: Sugar isomerase (SIS); Hypothetical protein; putative sugar phosphate isomerase 233822 7549902 Sca_0225 Staphylococcus carnosus subsp. carnosus TM300 putative sugar phosphate isomerase YP_002633323.1 233277 R 396513 CDS YP_002633324.1 224475718 7549903 complement(233824..234456) 1 NC_012121.1 (P39304) Probable hexulose-6-phosphate synthase (EC 4.1.2.-) (HUMPS) (D-arabino 3-hexulose 6-phosphate formaldehyde lyase),InterPro: Orotidine 5-phosphate decarboxylase; Hypothetical protein; putative hexulose-6-phosphate synthase 234456 7549903 Sca_0226 Staphylococcus carnosus subsp. carnosus TM300 putative hexulose-6-phosphate synthase YP_002633324.1 233824 R 396513 CDS YP_002633325.1 224475719 7549904 complement(234548..235291) 1 NC_012121.1 (Q8R5T0) Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase),InterPro: Glucosamine-6-phosphate isomerase; Hypothetical protein; putative glucosamine-6-phosphate isomerase 235291 nagB 7549904 nagB Staphylococcus carnosus subsp. carnosus TM300 putative glucosamine-6-phosphate isomerase YP_002633325.1 234548 R 396513 CDS YP_002633326.1 224475720 7551843 235961..236320 1 NC_012121.1 Hypothetical protein; hypothetical protein 236320 7551843 Sca_0228 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633326.1 235961 D 396513 CDS YP_002633327.1 224475721 7549905 236333..236998 1 NC_012121.1 (P42981) Hypothetical protein ypjG,InterPro: LmbE-like protein (Although most of the proteins in this group are of unknown function one, from Schizosaccharomyces pombe, has been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.); Hypothetical protein; putative LmbE-like protein family protein 236998 7549905 Sca_0229 Staphylococcus carnosus subsp. carnosus TM300 putative LmbE-like protein family protein YP_002633327.1 236333 D 396513 CDS YP_002633328.1 224475722 7549906 237015..237893 1 NC_012121.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 237893 7549906 Sca_0230 Staphylococcus carnosus subsp. carnosus TM300 putative GTP cyclohydrolase YP_002633328.1 237015 D 396513 CDS YP_002633329.1 224475723 7549907 238382..239821 1 NC_012121.1 (P30848) Proline/betaine transporter (Proline porter II) (PPII),InterPro: General substrate transporter; Hypothetical protein; proline/betaine transporter 239821 proP 7549907 proP Staphylococcus carnosus subsp. carnosus TM300 proline/betaine transporter YP_002633329.1 238382 D 396513 CDS YP_002633330.1 224475724 7551961 complement(240464..241294) 1 NC_012121.1 (Q8CTQ7) Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate kinase) (HMP-P kinase),InterPro: Phosphomethylpyrimidine kinase; Hypothetical protein; putative phosphomethylpyrimidine kinase 241294 thiD 7551961 thiD Staphylococcus carnosus subsp. carnosus TM300 putative phosphomethylpyrimidine kinase YP_002633330.1 240464 R 396513 CDS YP_002633331.1 224475725 7552176 241485..242150 1 NC_012121.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 242150 ung 7552176 ung Staphylococcus carnosus subsp. carnosus TM300 uracil-DNA glycosylase YP_002633331.1 241485 D 396513 CDS YP_002633332.1 224475726 7552280 242143..242532 1 NC_012121.1 Hypothetical protein; hypothetical protein 242532 7552280 Sca_0234 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633332.1 242143 D 396513 CDS YP_002633333.1 224475727 7549908 242617..243000 1 NC_012121.1 (P45019) Hypothetical protein HI1073,InterPro: Protein of unknown function DUF423; Hypothetical protein; hypothetical protein 243000 7549908 Sca_0235 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633333.1 242617 D 396513 CDS YP_002633334.1 224475728 7549909 243067..244590 1 NC_012121.1 (O60170) Probable amino-acid permease meu22 (Meiotic expression up-regulated protein 22),InterPro: Amino acid permease-associated region; Hypothetical protein; putative amino acid permease 244590 7549909 Sca_0236 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid permease YP_002633334.1 243067 D 396513 CDS YP_002633335.1 224475729 7549910 244893..245516 1 NC_012121.1 (Q48630) Alkaline phosphatase like protein,InterPro: DedA family; Hypothetical protein; alkaline phosphatase like protein 245516 apl 7549910 apl Staphylococcus carnosus subsp. carnosus TM300 alkaline phosphatase like protein YP_002633335.1 244893 D 396513 CDS YP_002633336.1 224475730 7551396 complement(245690..246481) 1 NC_012121.1 Hypothetical protein; hypothetical protein 246481 7551396 Sca_0238 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633336.1 245690 R 396513 CDS YP_002633337.1 224475731 7549911 complement(246671..247135) 1 NC_012121.1 (P44520) Hypothetical protein HI0108; Hypothetical protein; hypothetical protein 247135 7549911 Sca_0239 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633337.1 246671 R 396513 CDS YP_002633338.1 224475732 7549912 complement(247146..247928) 1 NC_012121.1 (P39402) Hypothetical protein yjjP; Hypothetical protein; hypothetical protein 247928 7549912 Sca_0240 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633338.1 247146 R 396513 CDS YP_002633339.1 224475733 7549913 complement(249347..250096) 1 NC_012121.1 (P39645) Hypothetical protein ywfI,pfam06778,Chlor_dismutase, Chlorite dismutase. This family contains chlorite dismutase enzymes of bacterial and archaeal origin. This enzyme catalyses the disproportionation of chlorite into chloride and oxygen. Note that many family members are hypothetical proteins.; Hypothetical protein; putative heme peroxidase 250096 7549913 Sca_0241 Staphylococcus carnosus subsp. carnosus TM300 putative heme peroxidase YP_002633339.1 249347 R 396513 CDS YP_002633340.1 224475734 7549914 250258..251247 1 NC_012121.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 251247 eutD 7549914 eutD Staphylococcus carnosus subsp. carnosus TM300 phosphotransacetylase YP_002633340.1 250258 D 396513 CDS YP_002633341.1 224475735 7551967 251247..252086 1 NC_012121.1 (P39648) Hypothetical protein ywfL,InterPro: Biotin/lipoate A/B protein ligase domain; Hypothetical protein; putative lipoate protein ligase 252086 lplA 7551967 lplA Staphylococcus carnosus subsp. carnosus TM300 putative lipoate protein ligase YP_002633341.1 251247 D 396513 CDS YP_002633342.1 224475736 7551754 252521..253444 1 NC_012121.1 (Q9V187) Mevalonate kinase (EC 2.7.1.36) (MK),InterPro: GHMP kinase; Hypothetical protein; mevalonate kinase 253444 mvaK1 7551754 mvaK1 Staphylococcus carnosus subsp. carnosus TM300 mevalonate kinase YP_002633342.1 252521 D 396513 CDS YP_002633343.1 224475737 7551834 253451..254446 1 NC_012121.1 (Q99JF5) Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate (diphospho)decarboxylase),InterPro: Diphosphomevalonate decarboxylase; Hypothetical protein; mevalonate diphosphate decarboxylase 254446 mvaD 7551834 mvaD Staphylococcus carnosus subsp. carnosus TM300 mevalonate diphosphate decarboxylase YP_002633343.1 253451 D 396513 CDS YP_002633344.1 224475738 7551833 254443..255519 1 NC_012121.1 (Q9V187) Mevalonate kinase (EC 2.7.1.36) (MK),InterPro: Gram positive phosphomevalonate kinase; Hypothetical protein; phosphomevalonate kinase 255519 mvaK2 7551833 mvaK2 Staphylococcus carnosus subsp. carnosus TM300 phosphomevalonate kinase YP_002633344.1 254443 D 396513 CDS YP_002633345.1 224475739 7551835 255730..256074 1 NC_012121.1 Hypothetical protein; hypothetical protein 256074 7551835 Sca_0247 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633345.1 255730 D 396513 CDS YP_002633346.1 224475740 7549915 complement(256342..256575) 1 NC_012121.1 Hypothetical protein; hypothetical protein 256575 7549915 Sca_0248 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633346.1 256342 R 396513 CDS YP_002633347.1 224475741 7549916 256846..257412 1 NC_012121.1 (P43340) Putative NAD(P)H oxidoreductase ycaK (EC 1.6.99.-); Hypothetical protein; putative multimeric flavodoxin WrbA family protein 257412 7549916 Sca_0249 Staphylococcus carnosus subsp. carnosus TM300 putative multimeric flavodoxin WrbA family protein YP_002633347.1 256846 D 396513 CDS YP_002633348.1 224475742 7549917 257624..258100 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative acetyltransferase 258100 7549917 Sca_0250 Staphylococcus carnosus subsp. carnosus TM300 putative acetyltransferase YP_002633348.1 257624 D 396513 CDS YP_002633349.1 224475743 7549918 258143..259441 1 NC_012121.1 (P39651) Hypothetical protein ywfO,InterPro: Metal-dependent phosphohydrolase HD region; Hypothetical protein; putative phosphohydrolase 259441 7549918 Sca_0251 Staphylococcus carnosus subsp. carnosus TM300 putative phosphohydrolase YP_002633349.1 258143 D 396513 CDS YP_002633350.1 224475744 7549919 259510..260022 1 NC_012121.1 Hypothetical protein; hypothetical protein 260022 7549919 Sca_0252 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633350.1 259510 D 396513 CDS YP_002633351.1 224475745 7549920 complement(260206..260823) 1 NC_012121.1 (P70775) Hypothetical protein yggA,InterPro: Lysine exporter protein (LYSE/YGGA); Hypothetical protein; putative LysE type translocator protein 260823 7549920 Sca_0253 Staphylococcus carnosus subsp. carnosus TM300 putative LysE type translocator protein YP_002633351.1 260206 R 396513 CDS YP_002633352.1 224475746 7549921 261573..262985 1 NC_012121.1 (P77730) Hypothetical protein ydcR,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein; GntR family transcriptional regulator 262985 7549921 Sca_0254 Staphylococcus carnosus subsp. carnosus TM300 GntR family transcriptional regulator YP_002633352.1 261573 D 396513 CDS YP_002633353.1 224475747 7549922 263325..263573 1 NC_012121.1 (Q9Z4V7) Hypothetical protein SCO2235 (ORFU1E),InterPro: Protein of unknown function DUF172; Hypothetical protein; hypothetical protein 263573 7549922 Sca_0255 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633353.1 263325 D 396513 CDS YP_002633354.1 224475748 7549923 263566..263835 1 NC_012121.1 (P56605) Hypothetical protein yoeB; Hypothetical protein; hypothetical protein 263835 7549923 Sca_0256 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633354.1 263566 D 396513 CDS YP_002633355.1 224475749 7549924 264322..265512 1 NC_012121.1 (P54970) IAA-amino acid hydrolase homolog 2 precursor,InterPro: Peptidase M20/M25/M40; Hypothetical protein; putative peptidase 265512 7549924 Sca_0257 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase YP_002633355.1 264322 D 396513 CDS YP_002633356.1 224475750 7549925 265673..266089 1 NC_012121.1 Hypothetical protein; hypothetical protein 266089 7549925 Sca_0258 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633356.1 265673 D 396513 CDS YP_002633357.1 224475751 7549926 266091..267755 1 NC_012121.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 267755 argS 7549926 argS Staphylococcus carnosus subsp. carnosus TM300 arginyl-tRNA synthetase YP_002633357.1 266091 D 396513 CDS YP_002633358.1 224475752 7551416 267887..268789 1 NC_012121.1 (Q8ZRP7) Vitamin B12 transport protein btuF precursor,InterPro: Periplasmic binding protein; Hypothetical protein; putative lipoprotein involved in iron transport 268789 7551416 Sca_0260 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein involved in iron transport YP_002633358.1 267887 D 396513 CDS YP_002633359.1 224475753 7549927 268795..269733 1 NC_012121.1 (Q57552) Putative ABC transporter permease protein MJ0087,InterPro: FecCD transport family; Hypothetical protein; FecCD transport family protein 269733 7549927 Sca_0261 Staphylococcus carnosus subsp. carnosus TM300 FecCD transport family protein YP_002633359.1 268795 D 396513 CDS YP_002633360.1 224475754 7549928 269813..270556 1 NC_012121.1 (Q9V1B3) Putative HAD-hydrolase PYRAB05140 (EC 3.-.-.-),InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein; haloacid dehalogenase-like hydrolase family protein 270556 7549928 Sca_0262 Staphylococcus carnosus subsp. carnosus TM300 haloacid dehalogenase-like hydrolase family protein YP_002633360.1 269813 D 396513 CDS YP_002633361.1 224475755 7549929 270531..271358 1 NC_012121.1 (P47229) 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate hydrolase (EC 3.7.1.-),InterPro: Alpha/beta hydrolase fold; Hypothetical protein; putative alpha/beta hydrolase 271358 7549929 Sca_0263 Staphylococcus carnosus subsp. carnosus TM300 putative alpha/beta hydrolase YP_002633361.1 270531 D 396513 CDS YP_002633362.1 224475756 7549930 271524..272030 1 NC_012121.1 Hypothetical protein; hypothetical protein 272030 7549930 Sca_0264 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633362.1 271524 D 396513 CDS YP_002633363.1 224475757 7549931 272152..272865 1 NC_012121.1 Hypothetical protein; hypothetical protein 272865 7549931 Sca_0265 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633363.1 272152 D 396513 CDS YP_002633364.1 224475758 7549932 complement(272966..273340) 1 NC_012121.1 (P35861) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2); Hypothetical protein; accessory regulator A 273340 sarA 7549932 sarA Staphylococcus carnosus subsp. carnosus TM300 accessory regulator A YP_002633364.1 272966 R 396513 CDS YP_002633365.1 224475759 7552104 complement(273671..274588) 1 NC_012121.1 Hypothetical protein; hypothetical protein 274588 7552104 Sca_0267 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633365.1 273671 R 396513 CDS YP_002633366.1 224475760 7549933 complement(274708..275640) 1 NC_012121.1 InterPro: Protein of unknown function DUF606; Hypothetical protein; hypothetical protein 275640 7549933 Sca_0268 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633366.1 274708 R 396513 CDS YP_002633367.1 224475761 7549934 275884..276114 1 NC_012121.1 Hypothetical protein; hypothetical protein 276114 7549934 Sca_0269 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633367.1 275884 D 396513 CDS YP_002633368.1 224475762 7549935 complement(276159..276371) 1 NC_012121.1 Hypothetical protein; hypothetical protein 276371 7549935 Sca_0270 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633368.1 276159 R 396513 CDS YP_002633369.1 224475763 7549936 complement(276386..276589) 1 NC_012121.1 Hypothetical protein; hypothetical protein 276589 7549936 Sca_0271 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633369.1 276386 R 396513 CDS YP_002633370.1 224475764 7549937 276957..278996 1 NC_012121.1 (P32703) Putative Na(+)/H(+) exchanger yjcE,InterPro: Sodium/hydrogen exchanger; Hypothetical protein; sodium/hydrogen exchanger family protein 278996 7549937 Sca_0272 Staphylococcus carnosus subsp. carnosus TM300 sodium/hydrogen exchanger family protein YP_002633370.1 276957 D 396513 CDS YP_002633371.1 224475765 7549938 complement(279254..280177) 1 NC_012121.1 (Q8Y653) Manganese-binding lipoprotein mntA precursor,InterPro: Periplasmic solute binding protein; Hypothetical protein; putative lipoprotein, AdhesinB family protein 280177 7549938 Sca_0273 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein, AdhesinB family protein YP_002633371.1 279254 R 396513 CDS YP_002633372.1 224475766 7549939 complement(280174..281010) 1 NC_012121.1 (Q92AG0) Manganese transport system membrane protein mntC,InterPro: ABC transporter family 3; Hypothetical protein; putative ABC transporter permease 281010 7549939 Sca_0274 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002633372.1 280174 R 396513 CDS YP_002633373.1 224475767 7549940 complement(281003..281659) 1 NC_012121.1 (P96117) Zinc transport system ATP-binding protein troB,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 281659 7549940 Sca_0275 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002633373.1 281003 R 396513 CDS YP_002633374.1 224475768 7549941 281886..282542 1 NC_012121.1 (Q92AD1) Transcriptional regulator mntR (Manganese transport regulator),InterPro: Iron dependent repressor; Hypothetical protein; putative metal dependent transcriptional regulator 282542 7549941 Sca_0276 Staphylococcus carnosus subsp. carnosus TM300 putative metal dependent transcriptional regulator YP_002633374.1 281886 D 396513 CDS YP_002633375.1 224475769 7549942 282696..283400 1 NC_012121.1 (P35575) Glucose-6-phosphatase (EC 3.1.3.9) (G6Pase) (G-6-Pase),InterPro: PA-phosphatase related phosphoesterase; Hypothetical protein; putative PA-phosphatase related membrane protein 283400 7549942 Sca_0277 Staphylococcus carnosus subsp. carnosus TM300 putative PA-phosphatase related membrane protein YP_002633375.1 282696 D 396513 CDS YP_002633376.1 224475770 7549943 complement(283444..283935) 1 NC_012121.1 (P76112) Hypothetical acetyltransferase yncA (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative N-acetyltransferase 283935 7549943 Sca_0278 Staphylococcus carnosus subsp. carnosus TM300 putative N-acetyltransferase YP_002633376.1 283444 R 396513 CDS YP_002633377.1 224475771 7549944 complement(283953..284699) 1 NC_012121.1 Hypothetical protein; hypothetical protein 284699 7549944 Sca_0279 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633377.1 283953 R 396513 CDS YP_002633378.1 224475772 7549945 complement(284780..285337) 1 NC_012121.1 (P37515) Probable maltose O-acetyltransferase (EC 2.3.1.79) (Maltose transacetylase),InterPro: Bacterial transferase hexapeptide repeat; Hypothetical protein; putative maltose O-acetyltransferase 285337 maa 7549945 maa Staphylococcus carnosus subsp. carnosus TM300 putative maltose O-acetyltransferase YP_002633378.1 284780 R 396513 CDS YP_002633379.1 224475773 7551767 285455..286231 1 NC_012121.1 (Q7MYM6) Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) (UDP-ManNAcA transferase),InterPro: Glycosyl transferase WecB/TagA/CpsF family; Hypothetical protein; putative teichoic acid biosynthesis protein 286231 tagA 7551767 tagA Staphylococcus carnosus subsp. carnosus TM300 putative teichoic acid biosynthesis protein YP_002633379.1 285455 D 396513 CDS YP_002633380.1 224475774 7552157 286873..288780 1 NC_012121.1 (P18256) Threonyl-tRNA synthetase 2 (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS),InterPro: Threonyl-tRNA synthetase class IIa; Hypothetical protein; threonyl-tRNA synthetase 288780 thrS 7552157 thrS Staphylococcus carnosus subsp. carnosus TM300 threonyl-tRNA synthetase YP_002633380.1 286873 D 396513 CDS YP_002633381.1 224475775 7552186 289006..290343 1 NC_012121.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 290343 7552186 Sca_0283 Staphylococcus carnosus subsp. carnosus TM300 4-aminobutyrate aminotransferase YP_002633381.1 289006 D 396513 CDS YP_002633382.1 224475776 7549946 290357..291448 1 NC_012121.1 (P37520) Hypothetical protein yyaD; Hypothetical protein; hypothetical protein 291448 7549946 Sca_0284 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633382.1 290357 D 396513 CDS YP_002633383.1 224475777 7549947 complement(292392..292796) 1 NC_012121.1 (O05398) Hypothetical protein yrhF; Hypothetical protein; hypothetical protein 292796 7549947 Sca_0285 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633383.1 292392 R 396513 CDS YP_002633384.1 224475778 7549948 complement(293141..293938) 1 NC_012121.1 with TagG is involved in the export of teichoic acids; teichoic acids export protein ATP-binding subunit 293938 tagH 7549948 tagH Staphylococcus carnosus subsp. carnosus TM300 teichoic acids export protein ATP-binding subunit YP_002633384.1 293141 R 396513 CDS YP_002633385.1 224475779 7552165 294249..295052 1 NC_012121.1 (P42953) Teichoic acid translocation permease protein tagG,InterPro: ABC transporter family 2; Hypothetical protein; teichoic acid translocation permease 295052 tagG 7552165 tagG Staphylococcus carnosus subsp. carnosus TM300 teichoic acid translocation permease YP_002633385.1 294249 D 396513 CDS YP_002633386.1 224475780 7552164 295134..296228 1 NC_012121.1 (Q8RKI8) Putative CDP-glycerol:glycerophosphate glycerophosphotransferase tarB (EC 2.7.8.-),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein; teichoic acid biosynthesis protein B 296228 tagB 7552164 tagB Staphylococcus carnosus subsp. carnosus TM300 teichoic acid biosynthesis protein B YP_002633386.1 295134 D 396513 CDS YP_002633387.1 224475781 7552158 296228..297286 1 NC_012121.1 (Q48214) Putative glycosyl transferase HI1696 (EC 2.-.-.-),InterPro: Glycosyl transferase family 2; Hypothetical protein; teichoic acid biosynthesis protein X 297286 tagX 7552158 tagX Staphylococcus carnosus subsp. carnosus TM300 teichoic acid biosynthesis protein X YP_002633387.1 296228 D 396513 CDS YP_002633388.1 224475782 7552166 297401..297799 1 NC_012121.1 (P27623) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D),InterPro: Cytidylyltransferase; Hypothetical protein; teichoic acid biosynthesis protein D 297799 tagD 7552166 tagD Staphylococcus carnosus subsp. carnosus TM300 teichoic acid biosynthesis protein D YP_002633388.1 297401 D 396513 CDS YP_002633389.1 224475783 7552159 complement(297894..299183) 1 NC_012121.1 (Q05523) D-alanyl-D-alanine carboxypeptidase precursor (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase) (CPase) (PBP5),InterPro: Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Hypothetical protein; penicillin binding protein 4 299183 pbp4 7552159 pbp4 Staphylococcus carnosus subsp. carnosus TM300 penicillin binding protein 4 YP_002633389.1 297894 R 396513 CDS YP_002633390.1 224475784 7551906 299414..301144 1 NC_012121.1 (P97046) Multidrug resistance ABC transporter ATP-binding and permease protein,InterPro: ABC transporter transmembrane region; Hypothetical protein; ATP-binding cassette transporter A 301144 7551906 Sca_0292 Staphylococcus carnosus subsp. carnosus TM300 ATP-binding cassette transporter A YP_002633390.1 299414 D 396513 CDS YP_002633391.1 224475785 7549949 301442..302671 1 NC_012121.1 (O00337) Sodium/nucleoside cotransporter 1 (Na(+)/nucleoside cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Concentrative nucleoside transporter 1) (CNT 1) (hCNT1),InterPro: Na+ dependent nucleoside transporter; Hypothetical protein; putative sodium dependent nucleoside transporter 302671 7549949 Sca_0293 Staphylococcus carnosus subsp. carnosus TM300 putative sodium dependent nucleoside transporter YP_002633391.1 301442 D 396513 CDS YP_002633392.1 224475786 7549950 303156..303992 1 NC_012121.1 (P39803) Hypothetical protein yitT,InterPro: Protein of unknown function DUF161; Hypothetical protein; hypothetical protein 303992 7549950 Sca_0294 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633392.1 303156 D 396513 CDS YP_002633393.1 224475787 7549951 304305..305108 1 NC_012121.1 (P49938) Ferrichrome transport ATP-binding protein fhuC,InterPro: ABC transporter; Hypothetical protein; ferrichrome transport ATP-binding protein 305108 fhuC 7549951 fhuC Staphylococcus carnosus subsp. carnosus TM300 ferrichrome transport ATP-binding protein YP_002633393.1 304305 D 396513 CDS YP_002633394.1 224475788 7551576 305119..306126 1 NC_012121.1 (P49936) Ferrichrome transport system permease protein fhuB,InterPro: FecCD transport family; Hypothetical protein; ferrichrome transport permease 306126 fhuB 7551576 fhuB Staphylococcus carnosus subsp. carnosus TM300 ferrichrome transport permease YP_002633394.1 305119 D 396513 CDS YP_002633395.1 224475789 7551575 306123..307139 1 NC_012121.1 (P49937) Ferrichrome transport system permease protein fhuG,InterPro: FecCD transport family; Hypothetical protein; ferrichrome transport permease 307139 fhuG 7551575 fhuG Staphylococcus carnosus subsp. carnosus TM300 ferrichrome transport permease YP_002633395.1 306123 D 396513 CDS YP_002633396.1 224475790 7551577 307258..307758 1 NC_012121.1 Hypothetical protein; hypothetical protein 307758 7551577 Sca_0298 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633396.1 307258 D 396513 CDS YP_002633397.1 224475791 7549952 308113..309180 1 NC_012121.1 (P37520) Hypothetical protein yyaD; Hypothetical protein; hypothetical protein 309180 7549952 Sca_0299 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633397.1 308113 D 396513 CDS YP_002633398.1 224475792 7549953 309405..310427 1 NC_012121.1 (P23872) Acetyl esterase (EC 3.1.1.-),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; putative esterase 310427 7549953 Sca_0300 Staphylococcus carnosus subsp. carnosus TM300 putative esterase YP_002633398.1 309405 D 396513 CDS YP_002633399.1 224475793 7549954 complement(310560..311066) 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative N-acetyltransferase 311066 7549954 Sca_0301 Staphylococcus carnosus subsp. carnosus TM300 putative N-acetyltransferase YP_002633399.1 310560 R 396513 CDS YP_002633400.1 224475794 7549955 311275..311955 1 NC_012121.1 (O34951) Sensory transduction protein bceR,InterPro: Response regulator receiver; Hypothetical protein; putative response regulator protein 311955 7549955 Sca_0302 Staphylococcus carnosus subsp. carnosus TM300 putative response regulator protein YP_002633400.1 311275 D 396513 CDS YP_002633401.1 224475795 7549956 311942..312985 1 NC_012121.1 (Q9K620) Sensor protein bceS (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; putative two-component sensor histidine kinase 312985 7549956 Sca_0303 Staphylococcus carnosus subsp. carnosus TM300 putative two-component sensor histidine kinase YP_002633401.1 311942 D 396513 CDS YP_002633402.1 224475796 7549957 313078..313839 1 NC_012121.1 (Q9K619) Bacitracin export ATP-binding protein bceA,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 313839 7549957 Sca_0304 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002633402.1 313078 D 396513 CDS YP_002633403.1 224475797 7549958 313829..315733 1 NC_012121.1 (O34741) Bacitracin export permease protein bceB,InterPro: Protein of unknown function DUF214; Hypothetical protein; putative ABC transporter permease 315733 7549958 Sca_0305 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002633403.1 313829 D 396513 CDS YP_002633404.1 224475798 7549959 316127..316744 1 NC_012121.1 (O34454) Hypothetical UPF0111 protein ykaA,InterPro: Protein of unknown function DUF47; Hypothetical protein; hypothetical protein 316744 7549959 Sca_0306 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633404.1 316127 D 396513 CDS YP_002633405.1 224475799 7549960 316758..317765 1 NC_012121.1 (O34436) Probable low-affinity inorganic phosphate transporter,InterPro: Phosphate transporter; Hypothetical protein; putative phosphate transporter protein 317765 7549960 Sca_0307 Staphylococcus carnosus subsp. carnosus TM300 putative phosphate transporter protein YP_002633405.1 316758 D 396513 CDS YP_002633406.1 224475800 7549961 complement(317832..318665) 1 NC_012121.1 (Q46857) 25-diketo-D-gluconic acid reductase A (EC 1.1.1.274) (25-DKG reductase A) (25-DKGR A) (25DKGR-A) (AKR5C),InterPro: Aldo/keto reductase; Hypothetical protein; Aldo/keto reductase family protein 318665 7549961 Sca_0308 Staphylococcus carnosus subsp. carnosus TM300 Aldo/keto reductase family protein YP_002633406.1 317832 R 396513 CDS YP_002633407.1 224475801 7549962 complement(318814..319992) 1 NC_012121.1 (P77389) Hypothetical transport protein ydhP,InterPro: General substrate transporter; Hypothetical protein; major facilitator family protein 319992 7549962 Sca_0309 Staphylococcus carnosus subsp. carnosus TM300 major facilitator family protein YP_002633407.1 318814 R 396513 CDS YP_002633408.1 224475802 7549963 320137..320475 1 NC_012121.1 (O34533) Hypothetical UPF0087 protein ytcD,InterPro: Protein of unknown function DUF24; Hypothetical protein; putative transcriptional regulator 320475 7549963 Sca_0310 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002633408.1 320137 D 396513 CDS YP_002633409.1 224475803 7549964 complement(320530..321345) 1 NC_012121.1 (P39046) Muramidase-2 precursor (EC 3.2.1.17) (14-beta-N-acetylmuramoylhydrolase) (Peptidoglycan hydrolase) (Pg-hydrolase-2) (Lysozyme),InterPro: CHAP; Hypothetical protein; putative peptidoglycan hydrolase 321345 7549964 Sca_0311 Staphylococcus carnosus subsp. carnosus TM300 putative peptidoglycan hydrolase YP_002633409.1 320530 R 396513 CDS YP_002633410.1 224475804 7549965 321693..322322 1 NC_012121.1 Hypothetical protein; putative integral membrane protein that interacts with FtsH 322322 7549965 Sca_0312 Staphylococcus carnosus subsp. carnosus TM300 putative integral membrane protein that interacts with FtsH YP_002633410.1 321693 D 396513 CDS YP_002633411.1 224475805 7549966 322807..323685 1 NC_012121.1 InterPro: Helix-turn-helix AraC type,This fragment is N-terminally truncated by about 60 aa which are encoded in preceding ORF (not annotated); Hypothetical protein; AraC family transcriptional regulator 323685 7549966 Sca_0313 Staphylococcus carnosus subsp. carnosus TM300 AraC family transcriptional regulator YP_002633411.1 322807 D 396513 CDS YP_002633412.1 224475806 7549967 323697..324011 1 NC_012121.1 Hypothetical protein; AraC family transcriptional regulator 324011 7549967 Sca_0314 Staphylococcus carnosus subsp. carnosus TM300 AraC family transcriptional regulator YP_002633412.1 323697 D 396513 CDS YP_002633413.1 224475807 7549968 324053..324784 1 NC_012121.1 Hypothetical protein; AraC family transcriptional regulator 324784 7549968 Sca_0315 Staphylococcus carnosus subsp. carnosus TM300 AraC family transcriptional regulator YP_002633413.1 324053 D 396513 CDS YP_002633414.1 224475808 7549969 324944..325303 1 NC_012121.1 Hypothetical protein; putative MarR type transcriptional regulator 325303 7549969 Sca_0316 Staphylococcus carnosus subsp. carnosus TM300 putative MarR type transcriptional regulator YP_002633414.1 324944 D 396513 CDS YP_002633415.1 224475809 7549970 325511..326230 1 NC_012121.1 (Q8CTK9) Hypothetical UPF0082 protein SE0437,InterPro: Protein of unknown function DUF28; Hypothetical protein; hypothetical protein 326230 7549970 Sca_0317 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633415.1 325511 D 396513 CDS YP_002633416.1 224475810 7549971 326232..326714 1 NC_012121.1 Hypothetical protein; hypothetical protein 326714 7549971 Sca_0318 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633416.1 326232 D 396513 CDS YP_002633417.1 224475811 7549972 326944..327516 1 NC_012121.1 InterPro: Protein of unknown function DUF402; Hypothetical protein; hypothetical protein 327516 7549972 Sca_0319 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633417.1 326944 D 396513 CDS YP_002633418.1 224475812 7549973 327648..328514 1 NC_012121.1 (O34827) Putative HTH-type transcriptional regulator ykuM,InterPro: LysR substrate binding domain; Hypothetical protein; LysR family transcriptional regulator 328514 7549973 Sca_0320 Staphylococcus carnosus subsp. carnosus TM300 LysR family transcriptional regulator YP_002633418.1 327648 D 396513 CDS YP_002633419.1 224475813 7549974 328689..329885 1 NC_012121.1 (P31436) Sugar efflux transporter C,InterPro: Major facilitator superfamily; Hypothetical protein; putative sugar efflux transporter 329885 7549974 Sca_0321 Staphylococcus carnosus subsp. carnosus TM300 putative sugar efflux transporter YP_002633419.1 328689 D 396513 CDS YP_002633420.1 224475814 7549975 329901..330386 1 NC_012121.1 (P54486) Hypothetical protein yqgC,InterPro: Protein of unknown function DUF456; Hypothetical protein; hypothetical protein 330386 7549975 Sca_0322 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633420.1 329901 D 396513 CDS YP_002633421.1 224475815 7549976 complement(330514..331200) 1 NC_012121.1 (P40350) Dolichyl-phosphate beta-glucosyltransferase (EC 2.4.1.117) (DolP-glucosyltransferase); Hypothetical protein; hypothetical protein 331200 7549976 Sca_0323 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633421.1 330514 R 396513 CDS YP_002633422.1 224475816 7549977 331388..331831 1 NC_012121.1 Hypothetical protein; hypothetical protein 331831 7549977 Sca_0324 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633422.1 331388 D 396513 CDS YP_002633423.1 224475817 7549978 331906..332217 1 NC_012121.1 Hypothetical protein; hypothetical protein 332217 7549978 Sca_0325 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633423.1 331906 D 396513 CDS YP_002633424.1 224475818 7549979 332445..332990 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative N-acetyltransferase 332990 7549979 Sca_0326 Staphylococcus carnosus subsp. carnosus TM300 putative N-acetyltransferase YP_002633424.1 332445 D 396513 CDS YP_002633425.1 224475819 7549980 complement(333097..333669) 1 NC_012121.1 (P48636) Hypothetical protein PA4923,InterPro: Conserved hypothetical protein 730; Hypothetical protein; lysine decarboxlyase family protein 333669 7549980 Sca_0327 Staphylococcus carnosus subsp. carnosus TM300 lysine decarboxlyase family protein YP_002633425.1 333097 R 396513 CDS YP_002633426.1 224475820 7549981 complement(333687..334127) 1 NC_012121.1 (Q8CTJ9) Hypothetical UPF0178 protein SE0451,InterPro: Protein of unknown function DUF188; Hypothetical protein; hypothetical protein 334127 7549981 Sca_0328 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633426.1 333687 R 396513 CDS YP_002633427.1 224475821 7549982 complement(334140..334841) 1 NC_012121.1 Hypothetical protein; hypothetical protein 334841 7549982 Sca_0329 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633427.1 334140 R 396513 CDS YP_002633428.1 224475822 7549983 complement(335021..335911) 1 NC_012121.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 335911 bacA 7549983 bacA Staphylococcus carnosus subsp. carnosus TM300 UDP pyrophosphate phosphatase YP_002633428.1 335021 R 396513 CDS YP_002633429.1 224475823 7551438 336359..337999 1 NC_012121.1 (P29018) Transport ATP-binding protein cydD,InterPro: ABC transporter transmembrane region; Hypothetical protein; putative cytochrome bd expression ABC transporter CydD 337999 cydD 7551438 cydD Staphylococcus carnosus subsp. carnosus TM300 putative cytochrome bd expression ABC transporter CydD YP_002633429.1 336359 D 396513 CDS YP_002633430.1 224475824 7551497 337996..339681 1 NC_012121.1 (P23886) Transport ATP-binding protein cydC,InterPro: ABC transporter transmembrane region; Hypothetical protein; putative cytochrome bd expression ABC transporter CydC 339681 cydC 7551497 cydC Staphylococcus carnosus subsp. carnosus TM300 putative cytochrome bd expression ABC transporter CydC YP_002633430.1 337996 D 396513 CDS YP_002633431.1 224475825 7551496 complement(339826..340266) 1 NC_012121.1 (O34777) Organic hydroperoxide resistance transcriptional regulator,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; MarR family regulatory protein 340266 7551496 Sca_0333 Staphylococcus carnosus subsp. carnosus TM300 MarR family regulatory protein YP_002633431.1 339826 R 396513 CDS YP_002633432.1 224475826 7549984 340516..341445 1 NC_012121.1 (P31521) 47 kDa protein (P47K),InterPro: Cobalamin synthesis protein/P47K; Hypothetical protein; putative cobalamin synthesis protein 341445 7549984 Sca_0334 Staphylococcus carnosus subsp. carnosus TM300 putative cobalamin synthesis protein YP_002633432.1 340516 D 396513 CDS YP_002633433.1 224475827 7549985 341634..342542 1 NC_012121.1 (P42972) Hypothetical oxidoreductase ycsN (EC 1.-.-.-),InterPro: Aldo/keto reductase; Hypothetical protein; alpha/keto reductase family protein 342542 7549985 Sca_0335 Staphylococcus carnosus subsp. carnosus TM300 alpha/keto reductase family protein YP_002633433.1 341634 D 396513 CDS YP_002633434.1 224475828 7549986 342573..342863 1 NC_012121.1 (P45403) Cytochrome c-type biogenesis protein cycK; Hypothetical protein; hypothetical protein 342863 7549986 Sca_0336 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633434.1 342573 D 396513 CDS YP_002633435.1 224475829 7549987 342937..343560 1 NC_012121.1 (Q9CHL6) Alkaline phosphatase like protein,InterPro: DedA family; Hypothetical protein; DedA family protein 343560 7549987 Sca_0337 Staphylococcus carnosus subsp. carnosus TM300 DedA family protein YP_002633435.1 342937 D 396513 CDS YP_002633436.1 224475830 7549988 343732..344667 1 NC_012121.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 344667 mdh 7549988 mdh Staphylococcus carnosus subsp. carnosus TM300 malate dehydrogenase YP_002633436.1 343732 D 396513 CDS YP_002633437.1 224475831 7551769 344956..346494 1 NC_012121.1 (Q07252) Membrane protein,InterPro: Sodium/sulphate symporter; Hypothetical protein; sodium/sulfate symporter family protein 346494 7551769 Sca_0339 Staphylococcus carnosus subsp. carnosus TM300 sodium/sulfate symporter family protein YP_002633437.1 344956 D 396513 CDS YP_002633438.1 224475832 7549989 complement(346852..347469) 1 NC_012121.1 Hypothetical protein; hypothetical protein 347469 7549989 Sca_0340 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633438.1 346852 R 396513 CDS YP_002633439.1 224475833 7549990 347779..348945 1 NC_012121.1 (P21191) Quinolone resistance protein norA,InterPro: General substrate transporter; Hypothetical protein; quinolone resistance protein NorA 348945 norA 7549990 norA Staphylococcus carnosus subsp. carnosus TM300 quinolone resistance protein NorA YP_002633439.1 347779 D 396513 CDS YP_002633440.1 224475834 7551858 349280..350098 1 NC_012121.1 (Q8Z992) D-methionine-binding lipoprotein metQ precursor,InterPro: NLPA lipoprotein; Hypothetical protein; putative lipoprotein 350098 7551858 Sca_0342 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633440.1 349280 D 396513 CDS YP_002633441.1 224475835 7549991 350120..351073 1 NC_012121.1 (P14561) L-lactate dehydrogenase P (EC 1.1.1.27) (L-LDH P),InterPro: Lactate/malate dehydrogenase; Hypothetical protein; putative L-lactate dehydrogenase 351073 ldh 7549991 ldh Staphylococcus carnosus subsp. carnosus TM300 putative L-lactate dehydrogenase YP_002633441.1 350120 D 396513 CDS YP_002633442.1 224475836 7551739 351371..351730 1 NC_012121.1 Hypothetical protein; hypothetical protein 351730 7551739 Sca_0344 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633442.1 351371 D 396513 CDS YP_002633443.1 224475837 7549992 351848..352336 1 NC_012121.1 (P37174) Protein ybaK,InterPro: YbaK/prolyl-tRNA synthetase associated region; Hypothetical protein; YbaK family protein 352336 7549992 Sca_0345 Staphylococcus carnosus subsp. carnosus TM300 YbaK family protein YP_002633443.1 351848 D 396513 CDS YP_002633444.1 224475838 7549993 352463..353227 1 NC_012121.1 (P16644) Lactose phosphotransferase system repressor,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein; putative transcriptional regulators of sugar metabolism 353227 7549993 Sca_0346 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulators of sugar metabolism YP_002633444.1 352463 D 396513 CDS YP_002633445.1 224475839 7549994 353224..354144 1 NC_012121.1 (O31714) 1-phosphofructokinase (EC 2.7.1.56) (Fructose 1-phosphate kinase),InterPro: Carbohydrate kinase PfkB; Hypothetical protein; putative fructose 1-phosphate kinase 354144 fruB 7549994 fruB Staphylococcus carnosus subsp. carnosus TM300 putative fructose 1-phosphate kinase YP_002633445.1 353224 D 396513 CDS YP_002633446.1 224475840 7551594 354151..356109 1 NC_012121.1 (P20966) PTS system fructose-specific IIBC component (EIIBC-Fru) (Fructose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Fru),InterPro: PTS fructose IIC component; Hypothetical protein; putative fructose specific permease 356109 fruA 7551594 fruA Staphylococcus carnosus subsp. carnosus TM300 putative fructose specific permease YP_002633446.1 354151 D 396513 CDS YP_002633447.1 224475841 7551592 356529..357938 1 NC_012121.1 (O07585) Hypothetical UPF0053 protein yhdP,InterPro: CBS; Hypothetical protein; hypothetical protein 357938 7551592 Sca_0349 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633447.1 356529 D 396513 CDS YP_002633448.1 224475842 7549995 358107..358535 1 NC_012121.1 Hypothetical protein; hypothetical protein 358535 7549995 Sca_0350 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633448.1 358107 D 396513 CDS YP_002633449.1 224475843 7549996 358612..359091 1 NC_012121.1 Hypothetical protein; hypothetical protein 359091 7549996 Sca_0351 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633449.1 358612 D 396513 CDS YP_002633450.1 224475844 7549997 359063..359596 1 NC_012121.1 (P39663) Alkaline phosphatase synthesis transcriptional regulatory protein sphR,InterPro: Response regulator receiver,Similar to N-terminal part (aa 1-178) of saeR protein [Staphylococcus aureus] (CAD89114): 228 aa; Hypothetical protein; response regulator saeR (fragment 1) 359596 saeR' 7549997 saeR' Staphylococcus carnosus subsp. carnosus TM300 response regulator saeR (fragment 1) YP_002633450.1 359063 D 396513 CDS YP_002633451.1 224475845 7552101 <359597..>359746 1 NC_012121.1 Similar to C-terminal part (aa 179-228) of saeR protein [Staphylococcus aureus](CAD89114): 228 aa; Hypothetical protein; response regulator saeR (fragment 2) >359746 saeR'' 7552101 saeR'' Staphylococcus carnosus subsp. carnosus TM300 response regulator saeR (fragment 2) YP_002633451.1 <359597 D 396513 CDS YP_002633452.1 224475846 7552102 359749..360783 1 NC_012121.1 (Q93CB7) Sensor histidine kinase mtrB (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; histidine protein kinase SaeS 360783 saeS 7552102 saeS Staphylococcus carnosus subsp. carnosus TM300 histidine protein kinase SaeS YP_002633452.1 359749 D 396513 CDS YP_002633453.1 224475847 7552103 complement(360836..361528) 1 NC_012121.1 involved in peptidoglycan cross-linking; cell wall biosynthesis protein ScdA 361528 scdA 7552103 scdA Staphylococcus carnosus subsp. carnosus TM300 cell wall biosynthesis protein ScdA YP_002633453.1 360836 R 396513 CDS YP_002633454.1 224475848 7552106 complement(361849..362685) 1 NC_012121.1 (Q8XBT6) 25-diketo-D-gluconic acid reductase A (EC 1.1.1.274) (25-DKG reductase A) (25-DKGR A) (25DKGR-A) (AKR5C),InterPro: Aldo/keto reductase; Hypothetical protein; Aldo/keto reductase family protein 362685 7552106 Sca_0355 Staphylococcus carnosus subsp. carnosus TM300 Aldo/keto reductase family protein YP_002633454.1 361849 R 396513 CDS YP_002633455.1 224475849 7549998 complement(362914..363168) 1 NC_012121.1 InterPro: Transglycosylase-associated protein; Hypothetical protein; hypothetical protein 363168 7549998 Sca_0356 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633455.1 362914 R 396513 CDS YP_002633456.1 224475850 7549999 complement(363272..363853) 1 NC_012121.1 Hypothetical protein; hypothetical protein 363853 7549999 Sca_0357 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633456.1 363272 R 396513 CDS YP_002633457.1 224475851 7550000 complement(364011..364724) 1 NC_012121.1 Hypothetical protein; putative organic radical activating enzyme 364724 7550000 Sca_0358 Staphylococcus carnosus subsp. carnosus TM300 putative organic radical activating enzyme YP_002633457.1 364011 R 396513 CDS YP_002633458.1 224475852 7550001 complement(364717..365142) 1 NC_012121.1 (Q46903) Putative 6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase),InterPro: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; Hypothetical protein; 6-pyruvoyl tetrahydropterin synthase 365142 7550001 Sca_0359 Staphylococcus carnosus subsp. carnosus TM300 6-pyruvoyl tetrahydropterin synthase YP_002633458.1 364717 R 396513 CDS YP_002633459.1 224475853 7550002 complement(365144..365815) 1 NC_012121.1 (P77756) Hypothetical protein ybaX,InterPro: ExsB; Hypothetical protein; putative ExsB family protein 365815 7550002 Sca_0360 Staphylococcus carnosus subsp. carnosus TM300 putative ExsB family protein YP_002633459.1 365144 R 396513 CDS YP_002633460.1 224475854 7550003 366157..366744 1 NC_012121.1 (P06193) Para-aminobenzoate synthase glutamine amidotransferase component II (EC 6.3.5.8) (ADC synthase),InterPro: Glutamine amidotransferase of anthranilate synthase; Hypothetical protein; glutamine amidotransferase class-I protein 366744 7550003 Sca_0361 Staphylococcus carnosus subsp. carnosus TM300 glutamine amidotransferase class-I protein YP_002633460.1 366157 D 396513 CDS YP_002633461.1 224475855 7550004 366734..367879 1 NC_012121.1 (P32483) Para-aminobenzoate synthase (EC 6.3.5.8) (P-aminobenzoic acid synthase) (PABA synthase),InterPro: Anthranilate synthase component I and chorismate binding protein; Hypothetical protein; putative chorismate binding protein 367879 7550004 Sca_0362 Staphylococcus carnosus subsp. carnosus TM300 putative chorismate binding protein YP_002633461.1 366734 D 396513 CDS YP_002633462.1 224475856 7550005 367882..368490 1 NC_012121.1 Hypothetical protein; putative 4-amino-4-deoxychorismate lyase 368490 7550005 Sca_0363 Staphylococcus carnosus subsp. carnosus TM300 putative 4-amino-4-deoxychorismate lyase YP_002633462.1 367882 D 396513 CDS YP_002633463.1 224475857 7550006 368771..369466 1 NC_012121.1 (P60495) Kinase A inhibitor (Sporulation inhibitor kipI),InterPro: Protein of unknown function DUF213; Hypothetical protein; putative allophanate hydrolase subunit 1 369466 7550006 Sca_0364 Staphylococcus carnosus subsp. carnosus TM300 putative allophanate hydrolase subunit 1 YP_002633463.1 368771 D 396513 CDS YP_002633464.1 224475858 7550007 369466..370470 1 NC_012121.1 (P75745) Hypothetical protein ybgK,InterPro: Urea amidolyase-related; Hypothetical protein; putative allophanate hydrolase subunit 2 370470 7550007 Sca_0365 Staphylococcus carnosus subsp. carnosus TM300 putative allophanate hydrolase subunit 2 YP_002633464.1 369466 D 396513 CDS YP_002633465.1 224475859 7550008 371112..373052 1 NC_012121.1 (P54496) Hypothetical protein yqgS,InterPro: Sulfatase; Hypothetical protein; putative membrane-bound sulfatase 373052 7550008 Sca_0366 Staphylococcus carnosus subsp. carnosus TM300 putative membrane-bound sulfatase YP_002633465.1 371112 D 396513 CDS YP_002633466.1 224475860 7550009 373321..375192 1 NC_012121.1 (P43672) ABC transporter ATP-binding protein uup,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 375192 7550009 Sca_0367 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002633466.1 373321 D 396513 CDS YP_002633467.1 224475861 7550010 375205..376983 1 NC_012121.1 (P15043) ATP-dependent DNA helicase recQ (EC 3.6.1.-),InterPro: ATP-requiring DNA helicase RecQ; Hypothetical protein; DNA helicase recQ 376983 recQ 7550010 recQ Staphylococcus carnosus subsp. carnosus TM300 DNA helicase recQ YP_002633467.1 375205 D 396513 CDS YP_002633468.1 224475862 7552016 377083..378039 1 NC_012121.1 (Q45460) Choline transport ATP-binding protein opuBA,InterPro: ABC transporter; Hypothetical protein; putative proline/glycine betaine ABC transporter ATPase 378039 opuBA 7552016 opuBA Staphylococcus carnosus subsp. carnosus TM300 putative proline/glycine betaine ABC transporter ATPase YP_002633468.1 377083 D 396513 CDS YP_002633469.1 224475863 7551889 378036..379550 1 NC_012121.1 (Q45462) Choline-binding protein precursor,InterPro: Substrate-binding region of ABC-type glycine betaine transport system; Hypothetical protein; putative glycine betaine ABC transporter substrate-binding protein 379550 opuAC 7551889 opuAC Staphylococcus carnosus subsp. carnosus TM300 putative glycine betaine ABC transporter substrate-binding protein YP_002633469.1 378036 D 396513 CDS YP_002633470.1 224475864 7551888 380128..381192 1 NC_012121.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 381192 hisC 7551888 hisC Staphylococcus carnosus subsp. carnosus TM300 histidinol-phosphate aminotransferase YP_002633470.1 380128 D 396513 CDS YP_002633471.1 224475865 7551690 381349..381648 1 NC_012121.1 (Q99VP8) Putative 5(3)-deoxyribonucleotidase (EC 3.1.3.-); Hypothetical protein; hypothetical protein 381648 7551690 Sca_0372 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633471.1 381349 D 396513 CDS YP_002633472.1 224475866 7550011 381623..381889 1 NC_012121.1 (Q99VP8) Putative 5(3)-deoxyribonucleotidase (EC 3.1.3.-); Hypothetical protein; hypothetical protein 381889 7550011 Sca_0373 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633472.1 381623 D 396513 CDS YP_002633473.1 224475867 7550012 complement(382067..383569) 1 NC_012121.1 (P94408) Hypothetical transporter yclF,InterPro: Amino acid/peptide transporter; Hypothetical protein; putative proton-dependent oligopeptide transporter 383569 7550012 Sca_0374 Staphylococcus carnosus subsp. carnosus TM300 putative proton-dependent oligopeptide transporter YP_002633473.1 382067 R 396513 CDS YP_002633474.1 224475868 7550013 complement(383798..385318) 1 NC_012121.1 (P94408) Hypothetical transporter yclF,InterPro: Amino acid/peptide transporter; Hypothetical protein; putative di-/tripeptide transporter 385318 7550013 Sca_0375 Staphylococcus carnosus subsp. carnosus TM300 putative di-/tripeptide transporter YP_002633474.1 383798 R 396513 CDS YP_002633475.1 224475869 7550014 complement(385483..385986) 1 NC_012121.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 385986 7550014 Sca_0376 Staphylococcus carnosus subsp. carnosus TM300 7-cyano-7-deazaguanine reductase YP_002633475.1 385483 R 396513 CDS YP_002633476.1 224475870 7550015 complement(385989..386879) 1 NC_012121.1 (Q07835) Hypothetical transport protein yxxF,InterPro: Protein of unknown function DUF6; Hypothetical protein; putative permease 386879 7550015 Sca_0377 Staphylococcus carnosus subsp. carnosus TM300 putative permease YP_002633476.1 385989 R 396513 CDS YP_002633477.1 224475871 7550016 387760..388152 1 NC_012121.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 388152 nrdI 7550016 nrdI Staphylococcus carnosus subsp. carnosus TM300 ribonucleotide reductase stimulatory protein YP_002633477.1 387760 D 396513 CDS YP_002633478.1 224475872 7551864 388133..390229 1 NC_012121.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 390229 nrdE 7551864 nrdE Staphylococcus carnosus subsp. carnosus TM300 ribonucleotide-diphosphate reductase subunit alpha YP_002633478.1 388133 D 396513 CDS YP_002633479.1 224475873 7551861 390368..391342 1 NC_012121.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 391342 nrdF 7551861 nrdF Staphylococcus carnosus subsp. carnosus TM300 ribonucleotide-diphosphate reductase subunit beta YP_002633479.1 390368 D 396513 CDS YP_002633480.1 224475874 7551862 391626..392600 1 NC_012121.1 (P37738) Ferric anguibactin transport system permease protein fatD,InterPro: FecCD transport family; Hypothetical protein; FecCD transport family protein SstA 392600 sstA 7551862 sstA Staphylococcus carnosus subsp. carnosus TM300 FecCD transport family protein SstA YP_002633480.1 391626 D 396513 CDS YP_002633481.1 224475875 7552149 392590..393552 1 NC_012121.1 (P37737) Ferric anguibactin transport system permease protein fatC,InterPro: FecCD transport family; Hypothetical protein; FecCD transport family protein SstB 393552 sstB 7552149 sstB Staphylococcus carnosus subsp. carnosus TM300 FecCD transport family protein SstB YP_002633481.1 392590 D 396513 CDS YP_002633482.1 224475876 7552150 393549..394307 1 NC_012121.1 (P49938) Ferrichrome transport ATP-binding protein fhuC,InterPro: ABC transporter; Hypothetical protein; ABC transporter ATP-binding protein 394307 sstC 7552150 sstC Staphylococcus carnosus subsp. carnosus TM300 ABC transporter ATP-binding protein YP_002633482.1 393549 D 396513 CDS YP_002633483.1 224475877 7552151 394395..395423 1 NC_012121.1 (P11460) Ferric anguibactin-binding protein precursor,InterPro: Periplasmic binding protein; Hypothetical protein; lipoprotein SstD 395423 sstD 7552151 sstD Staphylococcus carnosus subsp. carnosus TM300 lipoprotein SstD YP_002633483.1 394395 D 396513 CDS YP_002633484.1 224475878 7552152 complement(395914..396252) 1 NC_012121.1 (P36078) Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region,InterPro: CHY zinc finger; Hypothetical protein; putative CHY zinc finger family protein 396252 7552152 Sca_0385 Staphylococcus carnosus subsp. carnosus TM300 putative CHY zinc finger family protein YP_002633484.1 395914 R 396513 CDS YP_002633485.1 224475879 7550017 complement(396265..397191) 1 NC_012121.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 397191 murB 7550017 murB Staphylococcus carnosus subsp. carnosus TM300 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002633485.1 396265 R 396513 CDS YP_002633486.1 224475880 7551820 complement(397271..397795) 1 NC_012121.1 (Q45133) Glutamate-rich protein grpB,InterPro: Protein of unknown function UPF0157; Hypothetical protein; hypothetical protein 397795 7551820 Sca_0387 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633486.1 397271 R 396513 CDS YP_002633487.1 224475881 7550018 397900..398793 1 NC_012121.1 (P15801) DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit); Hypothetical protein; putative lipoprotein 398793 7550018 Sca_0388 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633487.1 397900 D 396513 CDS YP_002633488.1 224475882 7550019 398932..399252 1 NC_012121.1 (P39914) Hypothetical protein ytxJ (ORF2) (ORF3); Hypothetical protein; hypothetical protein 399252 7550019 Sca_0389 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633488.1 398932 D 396513 CDS YP_002633489.1 224475883 7550020 399487..400617 1 NC_012121.1 (P44507) Glycerate kinase (EC 2.7.1.31),InterPro: Conserved hypothetical protein 45; Hypothetical protein; putative glycerate kinase 400617 7550020 Sca_0390 Staphylococcus carnosus subsp. carnosus TM300 putative glycerate kinase YP_002633489.1 399487 D 396513 CDS YP_002633490.1 224475884 7550021 complement(400684..401916) 1 NC_012121.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 401916 pepT 7550021 pepT Staphylococcus carnosus subsp. carnosus TM300 peptidase T YP_002633490.1 400684 R 396513 CDS YP_002633491.1 224475885 7551926 complement(401930..402427) 1 NC_012121.1 (P44520) Hypothetical protein HI0108; Hypothetical protein; hypothetical protein 402427 7551926 Sca_0392 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633491.1 401930 R 396513 CDS YP_002633492.1 224475886 7550022 complement(402446..403210) 1 NC_012121.1 (P39402) Hypothetical protein yjjP; Hypothetical protein; hypothetical protein 403210 7550022 Sca_0393 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633492.1 402446 R 396513 CDS YP_002633493.1 224475887 7550023 complement(403415..404482) 1 NC_012121.1 (P54595) Hypothetical protein yhcK,InterPro: GGDEF; Hypothetical protein; hypothetical protein 404482 7550023 Sca_0394 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633493.1 403415 R 396513 CDS YP_002633494.1 224475888 7550024 404763..405818 1 NC_012121.1 (O34753) Probable undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) (UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase),InterPro: Glycosyl transferase family 4; Hypothetical protein; putative phospho-N-acetylmuramyl-pentapeptide-transferase 405818 llm 7550024 llm Staphylococcus carnosus subsp. carnosus TM300 putative phospho-N-acetylmuramyl-pentapeptide-transferase YP_002633494.1 404763 D 396513 CDS YP_002633495.1 224475889 7551753 complement(405859..406500) 1 NC_012121.1 (P32437) Hypothetical UPF0029 protein yvyE,InterPro: Protein of unknown function UPF0029; Hypothetical protein; hypothetical protein 406500 7551753 Sca_0396 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633495.1 405859 R 396513 CDS YP_002633496.1 224475890 7550025 406641..407525 1 NC_012121.1 (Q927X9) Hypothetical UPF0230 protein lin2658,InterPro: DegV; Hypothetical protein; hypothetical protein 407525 7550025 Sca_0397 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633496.1 406641 D 396513 CDS YP_002633497.1 224475891 7550026 407553..408908 1 NC_012121.1 (P39145) ComF operon protein,InterPro: DEAD/DEAH box helicase; Hypothetical protein; putative ATP-dependent helicase 408908 7550026 Sca_0398 Staphylococcus carnosus subsp. carnosus TM300 putative ATP-dependent helicase YP_002633497.1 407553 D 396513 CDS YP_002633498.1 224475892 7550027 408901..409602 1 NC_012121.1 (P39147) ComF operon protein; Hypothetical protein; putative amidophosphoribosyltransferase 409602 7550027 Sca_0399 Staphylococcus carnosus subsp. carnosus TM300 putative amidophosphoribosyltransferase YP_002633498.1 408901 D 396513 CDS YP_002633499.1 224475893 7550028 409674..410240 1 NC_012121.1 (P47995) Hypothetical protein in secA 5region (ORF1) (Fragment),InterPro: Sigma 54 modulation protein/ribosomal protein S30EA,In comparison to published sequence P47995 Hypothetical protein in SECA 5'region (ORF1) of S. carnosus, the gene starts further upstream.; Hypothetical protein; putative ribosome-associated protein 410240 7550028 Sca_0400 Staphylococcus carnosus subsp. carnosus TM300 putative ribosome-associated protein YP_002633499.1 409674 D 396513 CDS YP_002633500.1 224475894 7550029 410632..413160 1 NC_012121.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 413160 secA 7550029 secA Staphylococcus carnosus subsp. carnosus TM300 preprotein translocase subunit SecA YP_002633500.1 410632 D 396513 CDS YP_002633502.1 224475896 7551957 413447..414448 1 NC_012121.1 (P28367) Peptide chain release factor 2 (RF-2),InterPro: Peptide chain release factor 2,Probably fused to preceding ORF (prfB') by translational frameshift. According to sequence similarity, the fusion will start with codon at position 413405..413407.; Hypothetical protein; peptide chain release factor RF-2, major part 414448 prfB'' 7551957 prfB'' Staphylococcus carnosus subsp. carnosus TM300 peptide chain release factor RF-2, major part YP_002633502.1 413447 D 396513 CDS YP_002633503.1 224475897 7551958 414759..415745 1 NC_012121.1 (Q37896) Lysozyme (EC 3.2.1.17) (Lysis protein) (Muramidase) (Endolysin) (Morphogenesis protein 2),InterPro: CHAP; LysM; Hypothetical protein; putative LysM family protein 415745 7551958 Sca_0404 Staphylococcus carnosus subsp. carnosus TM300 putative LysM family protein YP_002633503.1 414759 D 396513 CDS YP_002633504.1 224475898 7550030 415939..416580 1 NC_012121.1 InterPro: Metal-dependent phosphohydrolase HD subdomain; Hypothetical protein; putative metal-dependent phosphohydrolase 416580 7550030 Sca_0405 Staphylococcus carnosus subsp. carnosus TM300 putative metal-dependent phosphohydrolase YP_002633504.1 415939 D 396513 CDS YP_002633505.1 224475899 7550031 416587..416832 1 NC_012121.1 (P37953) CsbA protein; Hypothetical protein; hypothetical protein 416832 7550031 Sca_0406 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633505.1 416587 D 396513 CDS YP_002633506.1 224475900 7550032 417181..419163 1 NC_012121.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 419163 uvrB 7550032 uvrB Staphylococcus carnosus subsp. carnosus TM300 excinuclease ABC subunit B YP_002633506.1 417181 D 396513 CDS YP_002633507.1 224475901 7552291 419171..422014 1 NC_012121.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 422014 uvrA 7552291 uvrA Staphylococcus carnosus subsp. carnosus TM300 excinuclease ABC subunit A YP_002633507.1 419171 D 396513 CDS YP_002633508.1 224475902 7552290 422226..423167 1 NC_012121.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 423167 hprK 7552290 hprK Staphylococcus carnosus subsp. carnosus TM300 HPr kinase/phosphorylase YP_002633508.1 422226 D 396513 CDS YP_002633509.1 224475903 7551702 423164..423991 1 NC_012121.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 423991 lgt 7551702 lgt Staphylococcus carnosus subsp. carnosus TM300 prolipoprotein diacylglyceryl transferase YP_002633509.1 423164 D 396513 CDS YP_002633510.1 224475904 7551749 424006..424488 1 NC_012121.1 (P77558) Putative colanic acid biosynthesis acetyltransferase wcaB (EC 2.3.1.-),InterPro: Bacterial transferase hexapeptide repeat; Hypothetical protein; putative acetyltransferase 424488 7551749 Sca_0411 Staphylococcus carnosus subsp. carnosus TM300 putative acetyltransferase YP_002633510.1 424006 D 396513 CDS YP_002633511.1 224475905 7550033 424509..425948 1 NC_012121.1 InterPro: TPR repeat; Hypothetical protein; hypothetical protein 425948 7550033 Sca_0412 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633511.1 424509 D 396513 CDS YP_002633512.1 224475906 7550034 426058..427011 1 NC_012121.1 (Q99VL2) Thioredoxin reductase (EC 1.8.1.9) (TRXR),InterPro: Thioredoxin reductase; Hypothetical protein; putative thioredoxine reductase 427011 trxB 7550034 trxB Staphylococcus carnosus subsp. carnosus TM300 putative thioredoxine reductase YP_002633512.1 426058 D 396513 CDS YP_002633513.1 224475907 7552271 427150..428103 1 NC_012121.1 (Q8CTE3) Hypothetical UPF0042 protein SE0548,InterPro: Uncharacterised P-loop ATPase protein family UPF0042; Hypothetical protein; hypothetical protein 428103 7552271 Sca_0414 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633513.1 427150 D 396513 CDS YP_002633514.1 224475908 7550035 428090..429088 1 NC_012121.1 (Q9K706) Hypothetical UPF0052 protein BH3568,InterPro: Protein of unknown function UPF0052; Hypothetical protein; hypothetical protein 429088 7550035 Sca_0415 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633514.1 428090 D 396513 CDS YP_002633515.1 224475909 7550036 429107..430051 1 NC_012121.1 InterPro: Protein of unknown function DUF199; Hypothetical protein; hypothetical protein 430051 7550036 Sca_0416 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633515.1 429107 D 396513 CDS YP_002633516.1 224475910 7550037 complement(430101..431276) 1 NC_012121.1 (P43531) Hypothetical transport protein ynfM,InterPro: Major facilitator superfamily; Hypothetical protein; putative major facilitator superfamily permease 431276 7550037 Sca_0417 Staphylococcus carnosus subsp. carnosus TM300 putative major facilitator superfamily permease YP_002633516.1 430101 R 396513 CDS YP_002633517.1 224475911 7550038 complement(431668..432993) 1 NC_012121.1 (P19072) Branched chain amino acid transport system II carrier protein (LIV-II),InterPro: Branched-chain amino acid transport system II carrier protein; Hypothetical protein; putative branched-chain amino acid transport system II carrier protein 432993 7550038 Sca_0418 Staphylococcus carnosus subsp. carnosus TM300 putative branched-chain amino acid transport system II carrier protein YP_002633517.1 431668 R 396513 CDS YP_002633518.1 224475912 7552205 433481..434065 1 NC_012121.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 434065 clpP 7552205 clpP Staphylococcus carnosus subsp. carnosus TM300 ATP-dependent Clp protease proteolytic subunit YP_002633518.1 433481 D 396513 CDS YP_002633519.1 224475913 7551475 complement(434389..435291) 1 NC_012121.1 (O31574) Hypothetical UPF0105 protein yfhF; Hypothetical protein; putative nucleoside-diphosphate sugar epimerase 435291 7551475 Sca_0420 Staphylococcus carnosus subsp. carnosus TM300 putative nucleoside-diphosphate sugar epimerase YP_002633519.1 434389 R 396513 CDS YP_002633520.1 224475914 7550040 435881..436771 1 NC_012121.1 Hypothetical protein; hypothetical protein 436771 7550040 Sca_0421 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633520.1 435881 D 396513 CDS YP_002633521.1 224475915 7550041 complement(436847..437077) 1 NC_012121.1 Hypothetical protein; hypothetical protein 437077 7550041 Sca_0422 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633521.1 436847 R 396513 CDS YP_002633522.1 224475916 7550042 437391..438407 1 NC_012121.1 (P35168) Central glycolytic genes regulator,InterPro: Putative sugar-binding domain; Hypothetical protein; putative transcriptional regulator with sugar binding domain 438407 7550042 Sca_0423 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator with sugar binding domain YP_002633522.1 437391 D 396513 CDS YP_002633523.1 224475917 7550043 438473..439480 1 NC_012121.1 Hypothetical protein; glyceraldehyde-3-phosphate dehydrogenase 439480 gapA 7550043 gapA Staphylococcus carnosus subsp. carnosus TM300 glyceraldehyde-3-phosphate dehydrogenase YP_002633523.1 438473 D 396513 CDS YP_002633524.1 224475918 7551609 439744..440934 1 NC_012121.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 440934 pgk 7551609 pgk Staphylococcus carnosus subsp. carnosus TM300 phosphoglycerate kinase YP_002633524.1 439744 D 396513 CDS YP_002633525.1 224475919 7551933 440977..441738 1 NC_012121.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 441738 tpiA 7551933 tpiA Staphylococcus carnosus subsp. carnosus TM300 triosephosphate isomerase YP_002633525.1 440977 D 396513 CDS YP_002633526.1 224475920 7552196 441740..443257 1 NC_012121.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 443257 gpmI 7552196 gpmI Staphylococcus carnosus subsp. carnosus TM300 phosphoglyceromutase YP_002633526.1 441740 D 396513 CDS YP_002633527.1 224475921 7551662 443353..444657 1 NC_012121.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 444657 eno 7551662 eno Staphylococcus carnosus subsp. carnosus TM300 phosphopyruvate hydratase YP_002633527.1 443353 D 396513 CDS YP_002633528.1 224475922 7551548 444845..445315 1 NC_012121.1 Hypothetical protein; hypothetical protein 445315 7551548 Sca_0429 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633528.1 444845 D 396513 CDS YP_002633529.1 224475923 7550044 445406..445642 1 NC_012121.1 (O32233) Probable protein-export membrane protein secG,InterPro: Preprotein translocase SecG subunit; Hypothetical protein; preprotein translocase subunit SecG 445642 secG 7550044 secG Staphylococcus carnosus subsp. carnosus TM300 preprotein translocase subunit SecG YP_002633529.1 445406 D 396513 CDS YP_002633530.1 224475924 7552123 445733..446473 1 NC_012121.1 (Q06174) Carboxylesterase precursor (EC 3.1.1.1),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; carboxylesterase 446473 est 7552123 est Staphylococcus carnosus subsp. carnosus TM300 carboxylesterase YP_002633530.1 445733 D 396513 CDS YP_002633531.1 224475925 7551550 446512..448869 1 NC_012121.1 (O32231) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein homolog),InterPro: VacB and RNase II family 3-5 exoribonuclease; Hypothetical protein; putative ribonuclease R 448869 rnr 7551550 rnr Staphylococcus carnosus subsp. carnosus TM300 putative ribonuclease R YP_002633531.1 446512 D 396513 CDS YP_002633532.1 224475926 7552034 448945..449415 1 NC_012121.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 449415 smpB 7552034 smpB Staphylococcus carnosus subsp. carnosus TM300 SsrA-binding protein YP_002633532.1 448945 D 396513 CDS YP_002633533.1 224475927 7549769 450785..451387 1 NC_012121.1 (O05220) Hypothetical protein ywrF; Hypothetical protein; putative flavoprotein oxygenase, DIM6/NTAB family protein 451387 7549769 Sca_0434 Staphylococcus carnosus subsp. carnosus TM300 putative flavoprotein oxygenase, DIM6/NTAB family protein YP_002633533.1 450785 D 396513 CDS YP_002633534.1 224475928 7550045 451535..452599 1 NC_012121.1 InterPro: Glycosyl hydrolase BNR repeat; Hypothetical protein; BNR repeat domain-containing protein 452599 7550045 Sca_0435 Staphylococcus carnosus subsp. carnosus TM300 BNR repeat domain-containing protein YP_002633534.1 451535 D 396513 CDS YP_002633535.1 224475929 7550046 complement(452697..453425) 1 NC_012121.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation; superantigen-like protein 453425 7550046 Sca_0436 Staphylococcus carnosus subsp. carnosus TM300 superantigen-like protein YP_002633535.1 452697 R 396513 CDS YP_002633536.1 224475930 7550047 453810..454013 1 NC_012121.1 (Q54974) Major cold-shock protein,InterPro: Cold-shock DNA-binding domain; Hypothetical protein; putative cold-shock protein 454013 csp 7550047 csp Staphylococcus carnosus subsp. carnosus TM300 putative cold-shock protein YP_002633536.1 453810 D 396513 CDS YP_002633537.1 224475931 7551486 454120..454605 1 NC_012121.1 Hypothetical protein; hypothetical protein 454605 7551486 Sca_0438 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633537.1 454120 D 396513 CDS YP_002633538.1 224475932 7550048 complement(454648..455067) 1 NC_012121.1 Hypothetical protein; hypothetical protein 455067 7550048 Sca_0439 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633538.1 454648 R 396513 CDS YP_002633539.1 224475933 7550049 complement(455256..455966) 1 NC_012121.1 Hypothetical protein; hypothetical protein 455966 7550049 Sca_0440 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633539.1 455256 R 396513 CDS YP_002633540.1 224475934 7550050 complement(456076..457380) 1 NC_012121.1 (P43440) V-type sodium ATP synthase subunit J (EC 3.6.3.14) (Na(+)-translocating ATPase subunit J),InterPro: Cation transporter; Hypothetical protein; putative cation transport protein of TrkH family 457380 7550050 Sca_0441 Staphylococcus carnosus subsp. carnosus TM300 putative cation transport protein of TrkH family YP_002633540.1 456076 R 396513 CDS YP_002633541.1 224475935 7550051 457433..458176 1 NC_012121.1 (P43054) Hypothetical 25.5 kDa protein in gyrB 5region (ORF219),InterPro: LemA family; Hypothetical protein; LemA family protein 458176 7550051 Sca_0442 Staphylococcus carnosus subsp. carnosus TM300 LemA family protein YP_002633541.1 457433 D 396513 CDS YP_002633542.1 224475936 7550052 458224..459027 1 NC_012121.1 (P55140) Hypothetical protein ygcG,InterPro: Protein of unknown function DUF477; Hypothetical protein; hypothetical protein 459027 7550052 Sca_0443 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633542.1 458224 D 396513 CDS YP_002633543.1 224475937 7550053 459247..459528 1 NC_012121.1 Hypothetical protein; hypothetical protein 459528 7550053 Sca_0444 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633543.1 459247 D 396513 CDS YP_002633544.1 224475938 7550054 459714..459917 1 NC_012121.1 Hypothetical protein; hypothetical protein 459917 7550054 Sca_0445 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633544.1 459714 D 396513 CDS YP_002633545.1 224475939 7550055 complement(460154..460549) 1 NC_012121.1 (Q10845) Hypothetical protein Rv2012/MT2067/Mb2035; Hypothetical protein; hypothetical protein 460549 7550055 Sca_0446 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633545.1 460154 R 396513 CDS YP_002633546.1 224475940 7550056 complement(460572..461090) 1 NC_012121.1 Hypothetical protein; putative acetyltransferase 461090 7550056 Sca_0447 Staphylococcus carnosus subsp. carnosus TM300 putative acetyltransferase YP_002633546.1 460572 R 396513 CDS YP_002633547.1 224475941 7550057 461522..462247 1 NC_012121.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 462247 aroD 7550057 aroD Staphylococcus carnosus subsp. carnosus TM300 3-dehydroquinate dehydratase YP_002633547.1 461522 D 396513 CDS YP_002633548.1 224475942 7551421 462320..462862 1 NC_012121.1 InterPro: Nitroreductase family; Hypothetical protein; putative nitroreductase 462862 7551421 Sca_0449 Staphylococcus carnosus subsp. carnosus TM300 putative nitroreductase YP_002633548.1 462320 D 396513 CDS YP_002633549.1 224475943 7550058 complement(462919..463242) 1 NC_012121.1 (P22217) Thioredoxin II (TR-II),InterPro: Thioredoxin type domain; Hypothetical protein; putative thioredoxin 463242 7550058 Sca_0450 Staphylococcus carnosus subsp. carnosus TM300 putative thioredoxin YP_002633549.1 462919 R 396513 CDS YP_002633550.1 224475944 7550059 463387..463743 1 NC_012121.1 (O32175) Hypothetical protein yusI,InterPro: Conserved hypothetical protein ArsC related; Hypothetical protein; putative ArsC family protein 463743 7550059 Sca_0451 Staphylococcus carnosus subsp. carnosus TM300 putative ArsC family protein YP_002633550.1 463387 D 396513 CDS YP_002633551.1 224475945 7550060 463900..464280 1 NC_012121.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 464280 gcdH 7550060 gcdH Staphylococcus carnosus subsp. carnosus TM300 glycine cleavage system protein H YP_002633551.1 463900 D 396513 CDS YP_002633552.1 224475946 7551615 464560..464922 1 NC_012121.1 InterPro: TOPRIM; Hypothetical protein; TOPRIM domain-containing protein 464922 7551615 Sca_0453 Staphylococcus carnosus subsp. carnosus TM300 TOPRIM domain-containing protein YP_002633552.1 464560 D 396513 CDS YP_002633553.1 224475947 7550061 464919..465218 1 NC_012121.1 (P46843) Bifunctional thioredoxin reductase/thioredoxin [Includes: Thioredoxin reductase (EC 1.8.1.9) (TRXR); Thioredoxin],InterPro: Thioredoxin domain 2; Hypothetical protein; hypothetical protein 465218 7550061 Sca_0454 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633553.1 464919 D 396513 CDS YP_002633554.1 224475948 7550062 465478..466503 1 NC_012121.1 (P30750) D-methionine transport ATP-binding protein metN,InterPro: ABC transporter; Hypothetical protein; ABC transporter ATP-binding protein 466503 7550062 Sca_0455 Staphylococcus carnosus subsp. carnosus TM300 ABC transporter ATP-binding protein YP_002633554.1 465478 D 396513 CDS YP_002633555.1 224475949 7550063 466496..467191 1 NC_012121.1 (P46492) Probable D-methionine transport system permease protein metI,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative ABC transporter permease 467191 7550063 Sca_0456 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002633555.1 466496 D 396513 CDS YP_002633556.1 224475950 7550064 467225..468049 1 NC_012121.1 (Q8ZH40) D-methionine-binding lipoprotein metQ precursor,InterPro: NLPA lipoprotein; Hypothetical protein; putative lipoprotein 468049 7550064 Sca_0457 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633556.1 467225 D 396513 CDS YP_002633557.1 224475951 7550065 468422..469180 1 NC_012121.1 (P80866) Vegetative protein 296 (VEG296),InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 469180 7550065 Sca_0458 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002633557.1 468422 D 396513 CDS YP_002633558.1 224475952 7550066 469246..470553 1 NC_012121.1 (O50093) Hypothetical UPF0051 protein PH1385,InterPro: Protein of unknown function UPF0051; Hypothetical protein; hypothetical protein 470553 7550066 Sca_0459 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633558.1 469246 D 396513 CDS YP_002633559.1 224475953 7550067 470756..471988 1 NC_012121.1 (Q99VG1) Probable cysteine desulfurase (EC 2.8.1.7),InterPro: Aminotransferase class V; Hypothetical protein; putative selenocysteine lyase 471988 csdB 7550067 csdB Staphylococcus carnosus subsp. carnosus TM300 putative selenocysteine lyase YP_002633559.1 470756 D 396513 CDS YP_002633560.1 224475954 7551485 471978..472448 1 NC_012121.1 Hypothetical protein; NifU-like protein 472448 7551485 Sca_0461 Staphylococcus carnosus subsp. carnosus TM300 NifU-like protein YP_002633560.1 471978 D 396513 CDS YP_002633561.1 224475955 7550068 472679..474076 1 NC_012121.1 (Q55790) Hypothetical UPF0051 protein slr0074,InterPro: Protein of unknown function UPF0051; Hypothetical protein; putative FeS assembly protein SufB 474076 sufB 7550068 sufB Staphylococcus carnosus subsp. carnosus TM300 putative FeS assembly protein SufB YP_002633561.1 472679 D 396513 CDS YP_002633562.1 224475956 7552155 complement(474144..475193) 1 NC_012121.1 (Q9CI63) Prophage ps2 probable integrase (Int-TnX),InterPro: Phage integrase,Sca-Prophage; Hypothetical protein; phage integrase 475193 int 7552155 int Staphylococcus carnosus subsp. carnosus TM300 phage integrase YP_002633562.1 474144 R 396513 CDS YP_002633563.1 224475957 7551723 complement(475670..475852) 1 NC_012121.1 Hypothetical protein; hypothetical protein 475852 7551723 Sca_0464 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633563.1 475670 R 396513 CDS YP_002633564.1 224475958 7550069 complement(476194..476658) 1 NC_012121.1 Sca-Prophage,reporting helix-turn-helix motif; Hypothetical protein; hypothetical protein 476658 7550069 Sca_0465 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633564.1 476194 R 396513 CDS YP_002633565.1 224475959 7550070 complement(476674..476997) 1 NC_012121.1 (O85264) Cryptic phage CTXphi transcriptional repressor rstR,InterPro: Helix-turn-helix motif,Sca-Prophage; Hypothetical protein; putative repressor, phage associated 476997 7550070 Sca_0466 Staphylococcus carnosus subsp. carnosus TM300 putative repressor, phage associated YP_002633565.1 476674 R 396513 CDS YP_002633566.1 224475960 7550071 477436..478203 1 NC_012121.1 InterPro: BRO family N-terminal,Sca-prophage; Hypothetical protein; putative antirepressor, phage associated 478203 7550071 Sca_0467 Staphylococcus carnosus subsp. carnosus TM300 putative antirepressor, phage associated YP_002633566.1 477436 D 396513 CDS YP_002633567.1 224475961 7550072 478209..478364 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 478364 7550072 Sca_0468 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633567.1 478209 D 396513 CDS YP_002633568.1 224475962 7550073 complement(478357..478581) 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 478581 7550073 Sca_0469 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633568.1 478357 R 396513 CDS YP_002633569.1 224475963 7550074 complement(479252..479524) 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 479524 7550074 Sca_0470 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633569.1 479252 R 396513 CDS YP_002633570.1 224475964 7550075 479588..479824 1 NC_012121.1 Reporting helix-turn-helix motif,Sca-prophage; Hypothetical protein; hypothetical protein 479824 7550075 Sca_0471 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633570.1 479588 D 396513 CDS YP_002633571.1 224475965 7550076 480130..480375 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 480375 7550076 Sca_0472 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633571.1 480130 D 396513 CDS YP_002633572.1 224475966 7550077 480368..480628 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 480628 7550077 Sca_0473 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633572.1 480368 D 396513 CDS YP_002633573.1 224475967 7550078 480585..481256 1 NC_012121.1 Sca-prophage,InterPro: ERF,putatively involved in single-strand annealing; Hypothetical protein; hypothetical protein 481256 7550078 Sca_0474 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633573.1 480585 D 396513 CDS YP_002633574.1 224475968 7550079 481256..481687 1 NC_012121.1 (Q932A8) Single-strand binding protein 1 (SSB 1) (Helix-destabilizing protein 1),InterPro: Single-strand binding protein,Sca-prophage; Hypothetical protein; putative single strand DNA binding protein,phage associated 481687 ssb 7550079 ssb Staphylococcus carnosus subsp. carnosus TM300 putative single strand DNA binding protein,phage associated YP_002633574.1 481256 D 396513 CDS YP_002633575.1 224475969 7552147 481699..482250 1 NC_012121.1 InterPro: HNH endonuclease,Sca-prophage; Hypothetical protein; putative HNH family endonuclease, phage associated 482250 7552147 Sca_0476 Staphylococcus carnosus subsp. carnosus TM300 putative HNH family endonuclease, phage associated YP_002633575.1 481699 D 396513 CDS YP_002633576.1 224475970 7550080 482251..482925 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 482925 7550080 Sca_0477 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633576.1 482251 D 396513 CDS YP_002633577.1 224475971 7550081 482922..483683 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 483683 7550081 Sca_0478 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633577.1 482922 D 396513 CDS YP_002633578.1 224475972 7550082 483684..484469 1 NC_012121.1 (Q89B30) DNA replication protein dnaC,InterPro: IstB-like ATP-binding protein,Sca-prophage; Hypothetical protein; putative IstB-like ATP-binding protein, phage associated 484469 7550082 Sca_0479 Staphylococcus carnosus subsp. carnosus TM300 putative IstB-like ATP-binding protein, phage associated YP_002633578.1 483684 D 396513 CDS YP_002633579.1 224475973 7550083 484635..485042 1 NC_012121.1 (P45911) Hypothetical protein yqaN,InterPro: Endodeoxyribonuclease RusA,Sca-prophage; Hypothetical protein; putative holliday junction resolvase, phage associated 485042 7550083 Sca_0480 Staphylococcus carnosus subsp. carnosus TM300 putative holliday junction resolvase, phage associated YP_002633579.1 484635 D 396513 CDS YP_002633580.1 224475974 7550084 485039..485215 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 485215 7550084 Sca_0481 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633580.1 485039 D 396513 CDS YP_002633581.1 224475975 7550085 485221..485751 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 485751 7550085 Sca_0482 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633581.1 485221 D 396513 CDS YP_002633582.1 224475976 7550086 485752..486228 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 486228 7550086 Sca_0483 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633582.1 485752 D 396513 CDS YP_002633583.1 224475977 7550087 486221..486706 1 NC_012121.1 (Q9PR82) Hypothetical protein UU063; Hypothetical protein; hypothetical protein 486706 7550087 Sca_0484 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633583.1 486221 D 396513 CDS YP_002633584.1 224475978 7550088 486753..486950 1 NC_012121.1 Sca-prophage; Hypothetical protein; hypothetical protein 486950 7550088 Sca_0485 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633584.1 486753 D 396513 CDS YP_002633585.1 224475979 7550089 487147..487656 1 NC_012121.1 (P33316) Deoxyuridine 5-triphosphate nucleotidohydrolase mitochondrial precursor (EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase),InterPro: DeoxyUTP pyrophosphatase subfamily 1; Hypothetical protein; putative dUTP pyrophosphatase, phage associated 487656 dut 7550089 dut Staphylococcus carnosus subsp. carnosus TM300 putative dUTP pyrophosphatase, phage associated YP_002633585.1 487147 D 396513 CDS YP_002633586.1 224475980 7551544 487706..487912 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 487912 7551544 Sca_0487 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633586.1 487706 D 396513 CDS YP_002633587.1 224475981 7550090 487913..488155 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 488155 7550090 Sca_0488 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633587.1 487913 D 396513 CDS YP_002633588.1 224475982 7550091 488427..488711 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 488711 7550091 Sca_0489 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633588.1 488427 D 396513 CDS YP_002633589.1 224475983 7550092 489235..489414 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 489414 7550092 Sca_0490 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633589.1 489235 D 396513 CDS YP_002633590.1 224475984 7550093 489427..489840 1 NC_012121.1 Sca-Prophage,Probably truncated; Hypothetical protein; hypothetical protein 489840 7550093 Sca_0491 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633590.1 489427 D 396513 CDS YP_002633591.1 224475985 7550094 490644..490991 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 490991 7550094 Sca_0492 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633591.1 490644 D 396513 CDS YP_002633592.1 224475986 7550095 490988..492628 1 NC_012121.1 (P59217) Putative terminase large subunit,InterPro: Phage Terminase,Sca-Prophage; Hypothetical protein; putative phage terminase, large subunit 492628 7550095 Sca_0493 Staphylococcus carnosus subsp. carnosus TM300 putative phage terminase, large subunit YP_002633592.1 490988 D 396513 CDS YP_002633593.1 224475987 7550096 492643..493815 1 NC_012121.1 InterPro: Phage portal protein,Sca-Prophage; Hypothetical protein; putative phage portal protein 493815 7550096 Sca_0494 Staphylococcus carnosus subsp. carnosus TM300 putative phage portal protein YP_002633593.1 492643 D 396513 CDS YP_002633594.1 224475988 7550097 493805..494521 1 NC_012121.1 (P56317) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp),InterPro: Clp protease,Sca-Prophage; Hypothetical protein; putative Clp protease, phage associated 494521 7550097 Sca_0495 Staphylococcus carnosus subsp. carnosus TM300 putative Clp protease, phage associated YP_002633594.1 493805 D 396513 CDS YP_002633595.1 224475989 7550098 494546..495664 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 495664 7550098 Sca_0496 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633595.1 494546 D 396513 CDS YP_002633596.1 224475990 7550099 495737..496033 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 496033 7550099 Sca_0497 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633596.1 495737 D 396513 CDS YP_002633597.1 224475991 7550100 496008..496373 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 496373 7550100 Sca_0498 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633597.1 496008 D 396513 CDS YP_002633598.1 224475992 7550101 496370..496777 1 NC_012121.1 Hypothetical protein; hypothetical protein 496777 7550101 Sca_0499 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633598.1 496370 D 396513 CDS YP_002633599.1 224475993 7550102 496774..497169 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 497169 7550102 Sca_0500 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633599.1 496774 D 396513 CDS YP_002633600.1 224475994 7550103 497211..497852 1 NC_012121.1 Hypothetical protein; major tail protein 497852 7550103 Sca_0501 Staphylococcus carnosus subsp. carnosus TM300 major tail protein YP_002633600.1 497211 D 396513 CDS YP_002633601.1 224475995 7550104 497929..498390 1 NC_012121.1 InterPro: Bacterial Ig-like group 2,Sca-Prophage; Hypothetical protein; phage phiSLT minor tail protein 498390 7550104 Sca_0502 Staphylococcus carnosus subsp. carnosus TM300 phage phiSLT minor tail protein YP_002633601.1 497929 D 396513 CDS YP_002633602.1 224475996 7550105 498438..498782 1 NC_012121.1 Hypothetical protein; hypothetical protein 498782 7550105 Sca_0503 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633602.1 498438 D 396513 CDS YP_002633603.1 224475997 7550106 498833..498988 1 NC_012121.1 >sas:SAS0943,Length = 52,Score = 42.4 bits (98),Expect = 0.001,Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%),But no detectable SD sequence!; Hypothetical protein; hypothetical protein 498988 7550106 Sca_0504 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633603.1 498833 D 396513 CDS YP_002633604.1 224475998 7550107 499002..501107 1 NC_012121.1 Sca-Prophage,Similar to aminoterminal part of phiSLT ORF2067; Hypothetical protein; phiSLT orf2067-like protein (fragment 1) 501107 7550107 Sca_0505 Staphylococcus carnosus subsp. carnosus TM300 phiSLT orf2067-like protein (fragment 1) YP_002633604.1 499002 D 396513 CDS YP_002633605.1 224475999 7550108 501142..505263 1 NC_012121.1 Sca-Prophage,Similar to carboxyterminal part of phiSLT ORF2067,InterPro: SLT domain; Hypothetical protein; phiSLT orf2067-like protein (fragment 2) 505263 7550108 Sca_0506 Staphylococcus carnosus subsp. carnosus TM300 phiSLT orf2067-like protein (fragment 2) YP_002633605.1 501142 D 396513 CDS YP_002633606.1 224476000 7550109 505260..506093 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 506093 7550109 Sca_0507 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633606.1 505260 D 396513 CDS YP_002633607.1 224476001 7550110 506104..507669 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 507669 7550110 Sca_0508 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633607.1 506104 D 396513 CDS YP_002633608.1 224476002 7550111 507662..507880 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 507880 7550111 Sca_0509 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633608.1 507662 D 396513 CDS YP_002633609.1 224476003 7550112 507885..509840 1 NC_012121.1 (P28296) Oryzin precursor (EC 3.4.21.63) (Alkaline proteinase) (ALP) (Elastase) (Elastinolytic serine proteinase),InterPro: Parallel beta-helix repeat; Hypothetical protein; hypothetical protein 509840 7550112 Sca_0510 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633609.1 507885 D 396513 CDS YP_002633610.1 224476004 7550113 509843..511267 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 511267 7550113 Sca_0511 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633610.1 509843 D 396513 CDS YP_002633611.1 224476005 7550114 511272..511628 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 511628 7550114 Sca_0512 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633611.1 511272 D 396513 CDS YP_002633612.1 224476006 7550115 511628..511801 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 511801 7550115 Sca_0513 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633612.1 511628 D 396513 CDS YP_002633613.1 224476007 7550116 511840..512262 1 NC_012121.1 Hypothetical protein; hypothetical protein 512262 7550116 Sca_0514 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633613.1 511840 D 396513 CDS YP_002633614.1 224476008 7550117 512249..512647 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 512647 7550117 Sca_0515 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633614.1 512249 D 396513 CDS YP_002633615.1 224476009 7550118 512694..514799 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 514799 7550118 Sca_0516 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633615.1 512694 D 396513 CDS YP_002633616.1 224476010 7550119 514858..515121 1 NC_012121.1 (Q99165) Hypothetical 9.5 kDa protein in ORF3 5region,InterPro: Holin SPP1,Sca-Prophage; Hypothetical protein; putative holin 515121 7550119 Sca_0517 Staphylococcus carnosus subsp. carnosus TM300 putative holin YP_002633616.1 514858 D 396513 CDS YP_002633617.1 224476011 7550120 515121..516524 1 NC_012121.1 (P54525) Hypothetical protein yqiI,InterPro: CHAP,Sca-Prophage; Hypothetical protein; putative amidase, phage associated 516524 7550120 Sca_0518 Staphylococcus carnosus subsp. carnosus TM300 putative amidase, phage associated YP_002633617.1 515121 D 396513 CDS YP_002633618.1 224476012 7550121 517218..517898 1 NC_012121.1 Sca-Prophage; Hypothetical protein; hypothetical protein 517898 7550121 Sca_0519 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633618.1 517218 D 396513 CDS YP_002633619.1 224476013 7550122 517891..518031 1 NC_012121.1 Hypothetical protein; hypothetical protein 518031 7550122 Sca_0520 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633619.1 517891 D 396513 CDS YP_002633620.1 224476014 7550123 518111..518911 1 NC_012121.1 (P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase,Sca-Prophage; Hypothetical protein; putative glycerophosphoryl diester phosphodiesterase 518911 glpQ 7550123 glpQ Staphylococcus carnosus subsp. carnosus TM300 putative glycerophosphoryl diester phosphodiesterase YP_002633620.1 518111 D 396513 CDS YP_002633621.1 224476015 7551643 519699..519914 1 NC_012121.1 Hypothetical protein; hypothetical protein 519914 7551643 Sca_0522 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633621.1 519699 D 396513 CDS YP_002633622.1 224476016 7550124 520221..521174 1 NC_012121.1 (P74409) Hypothetical UPF0053 protein sll0260,InterPro: CBS,Truncation of 20 amino acids at N-terminus; Hypothetical protein; hypothetical protein 521174 7550124 Sca_0523 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633622.1 520221 D 396513 CDS YP_002633623.1 224476017 7550125 521216..522292 1 NC_012121.1 (Q12723) 2-nitropropane dioxygenase (EC 1.13.11.32) (Nitroalkane oxidase) (2-NPD),InterPro: 2-nitropropane dioxygenase NPD; Hypothetical protein; putative FMN-dependent dioxygenase 522292 7550125 Sca_0524 Staphylococcus carnosus subsp. carnosus TM300 putative FMN-dependent dioxygenase YP_002633623.1 521216 D 396513 CDS YP_002633624.1 224476018 7550126 522417..523265 1 NC_012121.1 InterPro: Protein of unknown function DUF72; Hypothetical protein; hypothetical protein 523265 7550126 Sca_0525 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633624.1 522417 D 396513 CDS YP_002633625.1 224476019 7550127 523277..524101 1 NC_012121.1 (P54437) Hypothetical protein yrkJ,InterPro: Protein of unknown function DUF81; Hypothetical protein; hypothetical protein 524101 7550127 Sca_0526 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633625.1 523277 D 396513 CDS YP_002633626.1 224476020 7550128 524118..525437 1 NC_012121.1 (P54602) Hypothetical protein yhcR precursor,InterPro: Metallo-phosphoesterase; Hypothetical protein; putative 5-nucleotidase 525437 7550128 Sca_0527 Staphylococcus carnosus subsp. carnosus TM300 putative 5-nucleotidase YP_002633626.1 524118 D 396513 CDS YP_002633627.1 224476021 7550129 525521..526453 1 NC_012121.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 526453 lipA 7550129 lipA Staphylococcus carnosus subsp. carnosus TM300 lipoyl synthase YP_002633627.1 525521 D 396513 CDS YP_002633628.1 224476022 7551752 526637..527029 1 NC_012121.1 Hypothetical protein; hypothetical protein 527029 7551752 Sca_0529 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633628.1 526637 D 396513 CDS YP_002633629.1 224476023 7550130 complement(527079..527372) 1 NC_012121.1 Hypothetical protein; hypothetical protein 527372 7550130 Sca_0530 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633629.1 527079 R 396513 CDS YP_002633630.1 224476024 7550131 527472..527903 1 NC_012121.1 InterPro: Protein of unknown function DUF86; Hypothetical protein; hypothetical protein 527903 7550131 Sca_0531 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633630.1 527472 D 396513 CDS YP_002633631.1 224476025 7550132 527908..528687 1 NC_012121.1 (P15302) NagD protein,InterPro: HAD-superfamily subfamily IIA hydrolase hypothetical 1; Hypothetical protein; putative HAD superfamily hydrolase 528687 7550132 Sca_0532 Staphylococcus carnosus subsp. carnosus TM300 putative HAD superfamily hydrolase YP_002633631.1 527908 D 396513 CDS YP_002633632.1 224476026 7550133 528696..529667 1 NC_012121.1 (Q8U3Y2) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein; putative D-isomer specific 2-hydroxyacid dehydrogenase 529667 7550133 Sca_0533 Staphylococcus carnosus subsp. carnosus TM300 putative D-isomer specific 2-hydroxyacid dehydrogenase YP_002633632.1 528696 D 396513 CDS YP_002633633.1 224476027 7550134 530259..531713 1 NC_012121.1 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 531713 dltA 7550134 dltA Staphylococcus carnosus subsp. carnosus TM300 D-alanine--poly(phosphoribitol) ligase subunit 1 YP_002633633.1 530259 D 396513 CDS YP_002633634.1 224476028 7551525 531713..532927 1 NC_012121.1 (P35855) Protein dltB (Basic membrane protein) (BMP),InterPro: Membrane bound O-acyl transferase MBOAT; Hypothetical protein; DltB membrane protein 532927 dltB 7551525 dltB Staphylococcus carnosus subsp. carnosus TM300 DltB membrane protein YP_002633634.1 531713 D 396513 CDS YP_002633635.1 224476029 7551526 532950..533186 1 NC_012121.1 D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 533186 dltC 7551526 dltC Staphylococcus carnosus subsp. carnosus TM300 D-alanine--poly(phosphoribitol) ligase subunit 2 YP_002633635.1 532950 D 396513 CDS YP_002633636.1 224476030 7551527 533183..534337 1 NC_012121.1 (P39578) Protein dltD precursor,InterPro: DltD central region; Hypothetical protein; poly D-alanine transfer protein 534337 dltD 7551527 dltD Staphylococcus carnosus subsp. carnosus TM300 poly D-alanine transfer protein YP_002633636.1 533183 D 396513 CDS YP_002633637.1 224476031 7551528 534521..536569 1 NC_012121.1 (P05425) Probable copper exporting ATPase B (EC 3.6.3.4),InterPro: Copper-translocating P-type ATPase; Hypothetical protein; putative cation exporting ATPase 536569 7551528 Sca_0538 Staphylococcus carnosus subsp. carnosus TM300 putative cation exporting ATPase YP_002633637.1 534521 D 396513 CDS YP_002633638.1 224476032 7550135 536746..537516 1 NC_012121.1 (P32184) HTH-type transcriptional activator tipA,InterPro: Bacterial regulatory protein MerR family; Hypothetical protein; putative MerR family transcriptional regulator 537516 7550135 Sca_0539 Staphylococcus carnosus subsp. carnosus TM300 putative MerR family transcriptional regulator YP_002633638.1 536746 D 396513 CDS YP_002633639.1 224476033 7550136 complement(537581..537823) 1 NC_012121.1 (Q43909) Nitrogen fixation protein nifU,InterPro: Nitrogen-fixing NifU C-terminal; Hypothetical protein; hypothetical protein 537823 7550136 Sca_0540 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633639.1 537581 R 396513 CDS YP_002633640.1 224476034 7550137 537917..538237 1 NC_012121.1 Hypothetical protein; hypothetical protein 538237 7550137 Sca_0541 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633640.1 537917 D 396513 CDS YP_002633641.1 224476035 7550138 538342..538773 1 NC_012121.1 (P09163) Hypothetical acetyltransferase yjaB (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative acetyltransferase 538773 7550138 Sca_0542 Staphylococcus carnosus subsp. carnosus TM300 putative acetyltransferase YP_002633641.1 538342 D 396513 CDS YP_002633642.1 224476036 7550139 complement(538826..539890) 1 NC_012121.1 (P80861) NADH dehydrogenase-like protein yjlD (EC 1.6.99.-) (Glucose starvation-inducible protein 5) (GSI5),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein; putative pyridine nucleotide-disulfide oxidoreductase 539890 7550139 Sca_0543 Staphylococcus carnosus subsp. carnosus TM300 putative pyridine nucleotide-disulfide oxidoreductase YP_002633642.1 538826 R 396513 CDS YP_002633643.1 224476037 7550140 540132..540368 1 NC_012121.1 Hypothetical protein; hypothetical protein 540368 7550140 Sca_0544 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633643.1 540132 D 396513 CDS YP_002633644.1 224476038 7550141 540412..540771 1 NC_012121.1 (O32113) Hypothetical protein yutM,InterPro: Protein of unknown function HesB/YadR/YfhF; Hypothetical protein; hypothetical protein 540771 7550141 Sca_0545 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633644.1 540412 D 396513 CDS YP_002633645.1 224476039 7550142 541075..542280 1 NC_012121.1 (P80861) NADH dehydrogenase-like protein yjlD (EC 1.6.99.-) (Glucose starvation-inducible protein 5) (GSI5),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein; putative NADH dehydrogenase 542280 7550142 Sca_0546 Staphylococcus carnosus subsp. carnosus TM300 putative NADH dehydrogenase YP_002633645.1 541075 D 396513 CDS YP_002633646.1 224476040 7550143 542400..543887 1 NC_012121.1 (O32106) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase),InterPro: Peptidase M17 cytosol aminopeptidase C-terminal; Hypothetical protein; cytosol aminopeptidase family protein 543887 7550143 Sca_0547 Staphylococcus carnosus subsp. carnosus TM300 cytosol aminopeptidase family protein YP_002633646.1 542400 D 396513 CDS YP_002633647.1 224476041 7550144 544051..545367 1 NC_012121.1 (P46231) Hypothetical protein VP2115 (ORF3),InterPro: Na+/H+ antiporter NhaC; Hypothetical protein; putative permease 545367 7550144 Sca_0548 Staphylococcus carnosus subsp. carnosus TM300 putative permease YP_002633647.1 544051 D 396513 CDS YP_002633648.1 224476042 7550145 545398..545772 1 NC_012121.1 (P14205) ComA operon protein,InterPro: Phenylacetic acid degradation-related protein; Hypothetical protein; hypothetical protein 545772 7550145 Sca_0549 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633648.1 545398 D 396513 CDS YP_002633649.1 224476043 7550146 complement(545909..547057) 1 NC_012121.1 Hypothetical protein; hypothetical protein 547057 7550146 Sca_0550 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633649.1 545909 R 396513 CDS YP_002633650.1 224476044 7550147 complement(547194..547568) 1 NC_012121.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit G 547568 mnhG 7550147 mnhG Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit G YP_002633650.1 547194 R 396513 CDS YP_002633651.1 224476045 7551791 complement(547540..547836) 1 NC_012121.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit F 547836 mnhF 7551791 mnhF Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit F YP_002633651.1 547540 R 396513 CDS YP_002633652.1 224476046 7551790 complement(547836..548315) 1 NC_012121.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit E 548315 mnhE 7551790 mnhE Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit E YP_002633652.1 547836 R 396513 CDS YP_002633653.1 224476047 7551789 complement(548317..549813) 1 NC_012121.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 549813 mnhD 7551789 mnhD Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit D YP_002633653.1 548317 R 396513 CDS YP_002633654.1 224476048 7551788 complement(549806..550150) 1 NC_012121.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 550150 mnhC 7551788 mnhC Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit C YP_002633654.1 549806 R 396513 CDS YP_002633655.1 224476049 7551787 complement(550150..550515) 1 NC_012121.1 (Q52978) Probable K(+)/H(+) antiporter subunit A/B (pH adaptation potassium efflux system protein A/B) (Pha system subunit A/B),InterPro: Na+/H+ antiporter MnhB subunit-related protein; Hypothetical protein; putative Na+/H+ antiporter subunit 550515 mnhB 7551787 mnhB Staphylococcus carnosus subsp. carnosus TM300 putative Na+/H+ antiporter subunit YP_002633655.1 550150 R 396513 CDS YP_002633656.1 224476050 7551786 complement(550559..552976) 1 NC_012121.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 552976 mnhA 7551786 mnhA Staphylococcus carnosus subsp. carnosus TM300 monovalent cation/H+ antiporter subunit A YP_002633656.1 550559 R 396513 CDS YP_002633657.1 224476051 7551785 complement(553112..553495) 1 NC_012121.1 (Q08429) Kinase-associated lipoprotein B precursor; Hypothetical protein; hypothetical protein 553495 7551785 Sca_0558 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633657.1 553112 R 396513 CDS YP_002633658.1 224476052 7550148 553567..554160 1 NC_012121.1 (P52017) Peptidyl-prolyl cis-trans isomerase 10 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-10),InterPro: Peptidyl-prolyl cis-trans isomerase cyclophilin type; Hypothetical protein; putative peptidyl-prolyl cis-trans isomerase 554160 7550148 Sca_0559 Staphylococcus carnosus subsp. carnosus TM300 putative peptidyl-prolyl cis-trans isomerase YP_002633658.1 553567 D 396513 CDS YP_002633659.1 224476053 7550149 554262..554528 1 NC_012121.1 (O05234) Hypothetical protein yugE; Hypothetical protein; hypothetical protein 554528 7550149 Sca_0560 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633659.1 554262 D 396513 CDS YP_002633660.1 224476054 7550150 554556..555083 1 NC_012121.1 (Q8Y9Z9) Putative Nudix hydrolase lmo0368 (EC 3.6.-.-),InterPro: NUDIX hydrolase; Hypothetical protein; hypothetical protein 555083 7550150 Sca_0561 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633660.1 554556 D 396513 CDS YP_002633661.1 224476055 7550151 555235..555621 1 NC_012121.1 (P80870) General stress protein 13 (GSP13),InterPro: RNA binding S1; Hypothetical protein; hypothetical protein 555621 7550151 Sca_0562 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633661.1 555235 D 396513 CDS YP_002633662.1 224476056 7550152 555864..556991 1 NC_012121.1 (P54524) Probable NADH-dependent flavin oxidoreductase yqiG (EC 1.-.-.-),InterPro: NADH:flavin oxidoreductase/NADH oxidase; Hypothetical protein; putative NADH-dependent flavin oxidoreductase 556991 7550152 Sca_0563 Staphylococcus carnosus subsp. carnosus TM300 putative NADH-dependent flavin oxidoreductase YP_002633662.1 555864 D 396513 CDS YP_002633663.1 224476057 7550153 557244..558788 1 NC_012121.1 (Q9K9B2) 1-pyrroline-5-carboxylate dehydrogenase 1 (EC 1.5.1.12) (P5C dehydrogenase 1),InterPro: delta-1-pyrroline-5-carboxylate dehydrogenase 2; Hypothetical protein; 1-pyrroline-5-carboxylate dehydrogenase 558788 rocA 7550153 rocA Staphylococcus carnosus subsp. carnosus TM300 1-pyrroline-5-carboxylate dehydrogenase YP_002633663.1 557244 D 396513 CDS YP_002633664.1 224476058 7552036 558968..560158 1 NC_012121.1 (P60297) Acetylornithine aminotransferase 2 (EC 2.6.1.11) (ACOAT 2),InterPro: Aminotransferase class-III; Hypothetical protein; ornithine aminotransferase 560158 rocD 7552036 rocD Staphylococcus carnosus subsp. carnosus TM300 ornithine aminotransferase YP_002633664.1 558968 D 396513 CDS YP_002633665.1 224476059 7552037 560268..561512 1 NC_012121.1 (P50735) NAD-specific glutamate dehydrogenase (EC 1.4.1.2) (NAD-GDH),InterPro: Glu/Leu/Phe/Val dehydrogenase C terminal; Hypothetical protein; NAD-specific glutamate dehydrogenase 561512 gudB 7552037 gudB Staphylococcus carnosus subsp. carnosus TM300 NAD-specific glutamate dehydrogenase YP_002633665.1 560268 D 396513 CDS YP_002633666.1 224476060 7551673 561745..562707 1 NC_012121.1 (Q8R5M5) 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45),InterPro: Amidohydrolase 2; Hypothetical protein; putative amidohydrolase 562707 7551673 Sca_0567 Staphylococcus carnosus subsp. carnosus TM300 putative amidohydrolase YP_002633666.1 561745 D 396513 CDS YP_002633667.1 224476061 7550154 complement(562777..564150) 1 NC_012121.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 564150 argH 7550154 argH Staphylococcus carnosus subsp. carnosus TM300 argininosuccinate lyase YP_002633667.1 562777 R 396513 CDS YP_002633668.1 224476062 7551414 complement(564140..565345) 1 NC_012121.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 565345 argG 7551414 argG Staphylococcus carnosus subsp. carnosus TM300 argininosuccinate synthase YP_002633668.1 564140 R 396513 CDS YP_002633669.1 224476063 7551413 565693..567024 1 NC_012121.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 567024 pgi 7551413 pgi Staphylococcus carnosus subsp. carnosus TM300 glucose-6-phosphate isomerase YP_002633669.1 565693 D 396513 CDS YP_002633670.1 224476064 7551932 567229..567792 1 NC_012121.1 (P76219) Hypothetical UPF0043 protein ydjX,Orf1; similar to Bacillus subtilis yhjE,Due to manual inspection of SD sequence, start codon at position 39 of published sequence ( AAD09009 ) was chosen.; Hypothetical protein; hypothetical protein 567792 orf1 7551932 orf1 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633670.1 567229 D 396513 CDS YP_002633671.1 224476065 7551897 567805..568329 1 NC_012121.1 type-I signal peptidase 568329 sipA 7551897 sipA Staphylococcus carnosus subsp. carnosus TM300 type-I signal peptidase YP_002633671.1 567805 D 396513 CDS YP_002633672.1 224476066 7552132 568346..568915 1 NC_012121.1 (P72365) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader peptidase IB),InterPro: Signal peptidase; Hypothetical protein; type-1 signal peptidase 1B 568915 sipB 7552132 sipB Staphylococcus carnosus subsp. carnosus TM300 type-1 signal peptidase 1B YP_002633672.1 568346 D 396513 CDS YP_002633673.1 224476067 7552133 569078..572545 1 NC_012121.1 (P23477) ATP-dependent nuclease subunit B; Hypothetical protein; putative ATP-dependent nuclease subunit B 572545 addB 7552133 addB Staphylococcus carnosus subsp. carnosus TM300 putative ATP-dependent nuclease subunit B YP_002633673.1 569078 D 396513 CDS YP_002633674.1 224476068 7551372 572542..576204 1 NC_012121.1 (P23478) ATP-dependent nuclease subunit A,InterPro: UvrD/REP helicase; Hypothetical protein; putative ATP-dependent nuclease subunit A 576204 addA 7551372 addA Staphylococcus carnosus subsp. carnosus TM300 putative ATP-dependent nuclease subunit A YP_002633674.1 572542 D 396513 CDS YP_002633675.1 224476069 7551371 576378..577286 1 NC_012121.1 (O28058) Hypothetical protein AF2225,InterPro: Fumarylacetoacetate (FAA) hydrolase,reporting helix-turn-helix motif; Hypothetical protein; fumarylacetoacetate (FAA) hydrolase family protein 577286 7551371 Sca_0576 Staphylococcus carnosus subsp. carnosus TM300 fumarylacetoacetate (FAA) hydrolase family protein YP_002633675.1 576378 D 396513 CDS YP_002633676.1 224476070 7550155 complement(577414..577809) 1 NC_012121.1 Hypothetical protein; hypothetical protein 577809 7550155 Sca_0577 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633676.1 577414 R 396513 CDS YP_002633677.1 224476071 7550156 complement(577930..579252) 1 NC_012121.1 NADPH-dependent; catalyzes the reduction of coenzyme A disulfide; coenzyme A disulfide reductase 579252 cdr 7550156 cdr Staphylococcus carnosus subsp. carnosus TM300 coenzyme A disulfide reductase YP_002633677.1 577930 R 396513 CDS YP_002633678.1 224476072 7551466 complement(579364..580209) 1 NC_012121.1 (P43051) Hypothetical 31.6 kDa protein in UPP 3region,InterPro: Cof protein; Hypothetical protein; HAD superfamily hydrolase 580209 7551466 Sca_0579 Staphylococcus carnosus subsp. carnosus TM300 HAD superfamily hydrolase YP_002633678.1 579364 R 396513 CDS YP_002633679.1 224476073 7550157 580508..580816 1 NC_012121.1 (P53383) Mrp protein homolog,InterPro: Protein of unknown function DUF59; Hypothetical protein; hypothetical protein 580816 7550157 Sca_0580 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633679.1 580508 D 396513 CDS YP_002633680.1 224476074 7550158 581131..582966 1 NC_012121.1 (P43993) Hypothetical protein HI0392,InterPro: Acyltransferase 3 family; Hypothetical protein; hypothetical protein 582966 7550158 Sca_0581 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633680.1 581131 D 396513 CDS YP_002633681.1 224476075 7550159 583163..585772 1 NC_012121.1 (P74361) ClpB protein,InterPro: AAA ATPase central region; Hypothetical protein; ClpB chaperone 585772 clpB 7550159 clpB Staphylococcus carnosus subsp. carnosus TM300 ClpB chaperone YP_002633681.1 583163 D 396513 CDS YP_002633682.1 224476076 7551472 complement(585874..586077) 1 NC_012121.1 Hypothetical protein; hypothetical protein 586077 7551472 Sca_0583 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633682.1 585874 R 396513 CDS YP_002633683.1 224476077 7550160 586339..587280 1 NC_012121.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 587280 FabH 7550160 FabH Staphylococcus carnosus subsp. carnosus TM300 3-oxoacyl-(acyl carrier protein) synthase III YP_002633683.1 586339 D 396513 CDS YP_002633684.1 224476078 7551555 587292..588536 1 NC_012121.1 (P73283) 3-oxoacyl-[acyl-carrier-protein] synthase II (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase II) (KAS II),InterPro: Beta-ketoacyl synthase; Hypothetical protein; 3-oxoacyl-ACP synthase II 588536 fab 7551555 fab Staphylococcus carnosus subsp. carnosus TM300 3-oxoacyl-ACP synthase II YP_002633684.1 587292 D 396513 CDS YP_002633685.1 224476079 7551551 588792..590030 1 NC_012121.1 (P31126) Hypothetical protein ydeE,InterPro: Major facilitator superfamily; Hypothetical protein; putative major facilitator superfamily permease 590030 7551551 Sca_0586 Staphylococcus carnosus subsp. carnosus TM300 putative major facilitator superfamily permease YP_002633685.1 588792 D 396513 CDS YP_002633686.1 224476080 7550161 complement(590067..590441) 1 NC_012121.1 Hypothetical protein; hypothetical protein 590441 7550161 Sca_0587 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633686.1 590067 R 396513 CDS YP_002633687.1 224476081 7550162 590713..591639 1 NC_012121.1 (P24138) Oligopeptide transport system permease protein oppB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; oligopeptide transport system permease OppB-like protein 591639 oppB 7550162 oppB Staphylococcus carnosus subsp. carnosus TM300 oligopeptide transport system permease OppB-like protein YP_002633687.1 590713 D 396513 CDS YP_002633688.1 224476082 7551884 591639..592703 1 NC_012121.1 (P24139) Oligopeptide transport system permease protein oppC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative oligopeptide transport system permease OppC 592703 oppC 7551884 oppC Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transport system permease OppC YP_002633688.1 591639 D 396513 CDS YP_002633689.1 224476083 7551885 592718..593800 1 NC_012121.1 (P24136) Oligopeptide transport ATP-binding protein oppD,InterPro: ABC transporter; Hypothetical protein; oligopeptide transport system ATP-binding protein OppD 593800 oppD 7551885 oppD Staphylococcus carnosus subsp. carnosus TM300 oligopeptide transport system ATP-binding protein OppD YP_002633689.1 592718 D 396513 CDS YP_002633690.1 224476084 7551886 593790..594833 1 NC_012121.1 (P24137) Oligopeptide transport ATP-binding protein oppF,InterPro: ABC transporter,Reveals a N-terminal extension of about 35 aa when compared to homologs in databases; Hypothetical protein; oligopeptide transport system ATP-binding protein OppF 594833 oppF 7551886 oppF Staphylococcus carnosus subsp. carnosus TM300 oligopeptide transport system ATP-binding protein OppF YP_002633690.1 593790 D 396513 CDS YP_002633691.1 224476085 7551887 594848..596512 1 NC_012121.1 (P26906) Dipeptide-binding protein dppE precursor,InterPro: Bacterial extracellular solute-binding protein family 5; Hypothetical protein; putative peptide binding protein OppA 596512 oppA 7551887 oppA Staphylococcus carnosus subsp. carnosus TM300 putative peptide binding protein OppA YP_002633691.1 594848 D 396513 CDS YP_002633692.1 224476086 7551883 596675..597676 1 NC_012121.1 (O32254) Hypothetical protein yvbT,InterPro: Bacterial luciferase,reporting nucleic acid binding motif; Hypothetical protein; hypothetical protein 597676 7551883 Sca_0593 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633692.1 596675 D 396513 CDS YP_002633693.1 224476087 7550163 598054..599457 1 NC_012121.1 (Q9KBJ4) Thiamine biosynthesis protein thiC,InterPro: Thiamine biosynthesis protein ThiC,Similar to amino-terminal part of thiamin biosynthesis protein [Bacillus halodurans C-125] (BAB05652).; Hypothetical protein; thiamin biosynthesis protein ThiC (fragment 1) 599457 thiC' 7550163 thiC' Staphylococcus carnosus subsp. carnosus TM300 thiamin biosynthesis protein ThiC (fragment 1) YP_002633693.1 598054 D 396513 CDS YP_002633694.1 224476088 7552174 599388..599798 1 NC_012121.1 (Q82FI7) Thiamine biosynthesis protein thiC,InterPro: Thiamine biosynthesis protein ThiC,Similar to carboxy-terminal part of thiamin biosynthesis protein [Bacillus halodurans C-125] (BAB05652).; Hypothetical protein; thiamine biosynthesis protein ThiC (fragment 2) 599798 thiC'' 7552174 thiC'' Staphylococcus carnosus subsp. carnosus TM300 thiamine biosynthesis protein ThiC (fragment 2) YP_002633694.1 599388 D 396513 CDS YP_002633695.1 224476089 7552175 complement(600309..601304) 1 NC_012121.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 601304 trpS 7552175 trpS Staphylococcus carnosus subsp. carnosus TM300 tryptophanyl-tRNA synthetase YP_002633695.1 600309 R 396513 CDS YP_002633696.1 224476090 7552267 601701..602099 1 NC_012121.1 the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; transcriptional regulator Spx 602099 spxA 7552267 spxA Staphylococcus carnosus subsp. carnosus TM300 transcriptional regulator Spx YP_002633696.1 601701 D 396513 CDS YP_002633697.1 224476091 7550164 602404..603120 1 NC_012121.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 603120 7550164 Sca_0598 Staphylococcus carnosus subsp. carnosus TM300 adaptor protein YP_002633697.1 602404 D 396513 CDS YP_002633698.1 224476092 7550165 603409..605217 1 NC_012121.1 (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-),InterPro: Oligoendopeptidase F; Hypothetical protein; oligoendopeptidase F 605217 pepF 7550165 pepF Staphylococcus carnosus subsp. carnosus TM300 oligoendopeptidase F YP_002633698.1 603409 D 396513 CDS YP_002633699.1 224476093 7551925 complement(605542..605871) 1 NC_012121.1 Hypothetical protein; hypothetical protein 605871 7551925 Sca_0600 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633699.1 605542 R 396513 CDS YP_002633700.1 224476094 7550166 complement(605902..606462) 1 NC_012121.1 Similar to carboxy-terminal part of thiol protease [Staphylococcus aureus] (BAB86291).,InterPro: Peptidase C47 staphopain peptidase; Hypothetical protein; thiol protease-like protein (fragment 2) 606462 7550166 Sca_0601 Staphylococcus carnosus subsp. carnosus TM300 thiol protease-like protein (fragment 2) YP_002633700.1 605902 R 396513 CDS YP_002633701.1 224476095 7550167 complement(606522..607061) 1 NC_012121.1 Similar to amino-terminal part of thiol protease [Staphylococcus aureus] (BAB86291).; Hypothetical protein; thiol protease-like protein (fragment 1) 607061 7550167 Sca_0602 Staphylococcus carnosus subsp. carnosus TM300 thiol protease-like protein (fragment 1) YP_002633701.1 606522 R 396513 CDS YP_002633702.1 224476096 7550168 complement(607476..608261) 1 NC_012121.1 (Q81YT8) Probable disulfide bond formation protein D precursor (Disulfide oxidoreductase D) (Thiol-disulfide oxidoreductase D); Hypothetical protein; putative dithiol-disulfide isomerase 608261 7550168 Sca_0603 Staphylococcus carnosus subsp. carnosus TM300 putative dithiol-disulfide isomerase YP_002633702.1 607476 R 396513 CDS YP_002633703.1 224476097 7550169 complement(608277..608648) 1 NC_012121.1 (Q9CC59) Hemoglobin-like protein HbO,InterPro: Protozoan/cyanobacterial globin; Hypothetical protein; globin family protein 608648 7550169 Sca_0604 Staphylococcus carnosus subsp. carnosus TM300 globin family protein YP_002633703.1 608277 R 396513 CDS YP_002633704.1 224476098 7550170 complement(608751..609323) 1 NC_012121.1 (P30871) Hypothetical protein ygiF (ORFXE),InterPro: Adenylate cyclase; Hypothetical protein; hypothetical protein 609323 7550170 Sca_0605 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633704.1 608751 R 396513 CDS YP_002633705.1 224476099 7550171 609476..609823 1 NC_012121.1 Hypothetical protein; hypothetical protein 609823 7550171 Sca_0606 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633705.1 609476 D 396513 CDS YP_002633706.1 224476100 7550172 609840..610475 1 NC_012121.1 (Q49640) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP 3-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase),InterPro: RelA/SpoT; Hypothetical protein; hypothetical protein 610475 7550172 Sca_0607 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633706.1 609840 D 396513 CDS YP_002633707.1 224476101 7550173 610484..611293 1 NC_012121.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 611293 ppnK 7550173 ppnK Staphylococcus carnosus subsp. carnosus TM300 inorganic polyphosphate/ATP-NAD kinase YP_002633707.1 610484 D 396513 CDS YP_002633708.1 224476102 7550174 611293..612177 1 NC_012121.1 (O31613) Hypothetical pseudouridine synthase yjbO (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase RluD; Hypothetical protein; putative pseudouridylate synthase 612177 7550174 Sca_0609 Staphylococcus carnosus subsp. carnosus TM300 putative pseudouridylate synthase YP_002633708.1 611293 D 396513 CDS YP_002633709.1 224476103 7550175 612198..613580 1 NC_012121.1 (O67820) Inosine-5-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD),InterPro: Divalent cation transporter; Hypothetical protein; putative divalent cation transporter 613580 7550175 Sca_0610 Staphylococcus carnosus subsp. carnosus TM300 putative divalent cation transporter YP_002633709.1 612198 D 396513 CDS YP_002633710.1 224476104 7550176 613591..615447 1 NC_012121.1 (Q83SQ3) Glutathione-regulated potassium-efflux system protein kefC (K(+)/H(+) antiporter),InterPro: Sodium/hydrogen exchanger; Hypothetical protein; putative cation transport system 615447 7550176 Sca_0611 Staphylococcus carnosus subsp. carnosus TM300 putative cation transport system YP_002633710.1 613591 D 396513 CDS YP_002633711.1 224476105 7550177 615660..616430 1 NC_012121.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 616430 fabI 7550177 fabI Staphylococcus carnosus subsp. carnosus TM300 enoyl-(acyl carrier protein) reductase YP_002633711.1 615660 D 396513 CDS YP_002633712.1 224476106 7551556 616848..618086 1 NC_012121.1 (P71369) Hypothetical metabolite transport protein HI1104,InterPro: General substrate transporter; Hypothetical protein; putative transporter protein 618086 7551556 Sca_0613 Staphylococcus carnosus subsp. carnosus TM300 putative transporter protein YP_002633712.1 616848 D 396513 CDS YP_002633713.1 224476107 7550178 complement(618215..619300) 1 NC_012121.1 (O34472) Hypothetical UPF0118 protein yrrI,InterPro: Protein of unknown function UPF0118,UPF0118, Domain of unknown function DUF20. This transmembrane region is found in putative permeases and predicted transmembrane proteins it has no known function. It is not clear what source suggested that these proteins may be permeases and this information should be treated with caution.; Hypothetical protein; hypothetical protein 619300 7550178 Sca_0614 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633713.1 618215 R 396513 CDS YP_002633714.1 224476108 7550179 complement(619553..621199) 1 NC_012121.1 (P30145) Sodium/proton-dependent alanine carrier protein,InterPro: Sodium:alanine symporter; Hypothetical protein; sodium:alanine symporter family protein 621199 7550179 Sca_0615 Staphylococcus carnosus subsp. carnosus TM300 sodium:alanine symporter family protein YP_002633714.1 619553 R 396513 CDS YP_002633715.1 224476109 7550180 621503..622240 1 NC_012121.1 (P31471) Protein yieL,InterPro: Putative esterase; Hypothetical protein; putative esterase family protein 622240 7550180 Sca_0616 Staphylococcus carnosus subsp. carnosus TM300 putative esterase family protein YP_002633715.1 621503 D 396513 CDS YP_002633716.1 224476110 7550181 622337..622846 1 NC_012121.1 similar to 2'-5' RNA ligase; hypothetical protein 622846 7550181 Sca_0617 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633716.1 622337 D 396513 CDS YP_002633717.1 224476111 7550182 complement(623048..624253) 1 NC_012121.1 (P39843) Multidrug resistance protein 2 (Multidrug-efflux transporter 2),InterPro: Major facilitator superfamily; Hypothetical protein; putative permease 624253 7550182 Sca_0618 Staphylococcus carnosus subsp. carnosus TM300 putative permease YP_002633717.1 623048 R 396513 CDS YP_002633718.1 224476112 7550183 complement(624231..625406) 1 NC_012121.1 processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids; diacylglycerol glucosyltransferase 625406 7550183 Sca_0619 Staphylococcus carnosus subsp. carnosus TM300 diacylglycerol glucosyltransferase YP_002633718.1 624231 R 396513 CDS YP_002633719.1 224476113 7550184 625803..627287 1 NC_012121.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase 627287 murE 7550184 murE Staphylococcus carnosus subsp. carnosus TM300 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase YP_002633719.1 625803 D 396513 CDS YP_002633720.1 224476114 7551823 627521..629083 1 NC_012121.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 629083 prfC 7551823 prfC Staphylococcus carnosus subsp. carnosus TM300 peptide chain release factor 3 YP_002633720.1 627521 D 396513 CDS YP_002633721.1 224476115 7551959 629356..630171 1 NC_012121.1 (O34447) Hypothetical protein yceF,InterPro: Integral membrane protein TerC family; Hypothetical protein; putative TerC family integral membrane protein 630171 7551959 Sca_0624 Staphylococcus carnosus subsp. carnosus TM300 putative TerC family integral membrane protein YP_002633721.1 629356 D 396513 CDS YP_002633722.1 224476116 7550185 630349..632100 1 NC_012121.1 (P39668) Hypothetical serine protease yyxA (EC 3.4.21.-),InterPro: Peptidase S1 chymotrypsin family; Hypothetical protein; putative protease 632100 7550185 Sca_0625 Staphylococcus carnosus subsp. carnosus TM300 putative protease YP_002633722.1 630349 D 396513 CDS YP_002633723.1 224476117 7550186 632118..633476 1 NC_012121.1 (P43440) V-type sodium ATP synthase subunit J (EC 3.6.3.14) (Na(+)-translocating ATPase subunit J),InterPro: Cation transporter; Hypothetical protein; putative sodium transport protein 633476 7550186 Sca_0626 Staphylococcus carnosus subsp. carnosus TM300 putative sodium transport protein YP_002633723.1 632118 D 396513 CDS YP_002633724.1 224476118 7550187 633695..634159 1 NC_012121.1 (P71047) Hypothetical UPF0074 protein ywgB precursor,InterPro: Protein of unknown function UPF0074; Hypothetical protein; putative transcriptional regulator 634159 7550187 Sca_0627 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002633724.1 633695 D 396513 CDS YP_002633725.1 224476119 7550188 634189..635511 1 NC_012121.1 (P77212) Probable pyridine nucleotide-disulfide oxidoreductase ykgC,InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein; putative pyridine nucleotide-disulfide oxidoreductase 635511 7550188 Sca_0628 Staphylococcus carnosus subsp. carnosus TM300 putative pyridine nucleotide-disulfide oxidoreductase YP_002633725.1 634189 D 396513 CDS YP_002633726.1 224476120 7550189 complement(635575..636204) 1 NC_012121.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 636204 hisIE 7550189 hisIE Staphylococcus carnosus subsp. carnosus TM300 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_002633726.1 635575 R 396513 CDS YP_002633727.1 224476121 7551696 complement(636195..636959) 1 NC_012121.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 636959 hisF 7551696 hisF Staphylococcus carnosus subsp. carnosus TM300 imidazole glycerol phosphate synthase subunit HisF YP_002633727.1 636195 R 396513 CDS YP_002633728.1 224476122 7551693 complement(636956..637660) 1 NC_012121.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-hosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 637660 hisA 7551693 hisA Staphylococcus carnosus subsp. carnosus TM300 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002633728.1 636956 R 396513 CDS YP_002633729.1 224476123 7551688 complement(637653..638234) 1 NC_012121.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 638234 hisH 7551688 hisH Staphylococcus carnosus subsp. carnosus TM300 imidazole glycerol phosphate synthase subunit HisH YP_002633729.1 637653 R 396513 CDS YP_002633730.1 224476124 7551695 complement(638231..638812) 1 NC_012121.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 638812 hisB 7551695 hisB Staphylococcus carnosus subsp. carnosus TM300 imidazoleglycerol-phosphate dehydratase YP_002633730.1 638231 R 396513 CDS YP_002633731.1 224476125 7551689 complement(638790..639794) 1 NC_012121.1 (Q8R5Q4) Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase),InterPro: Aminotransferase class I and II; Hypothetical protein; putative histidinol-phosphate transaminase 639794 hisC 7551689 hisC Staphylococcus carnosus subsp. carnosus TM300 putative histidinol-phosphate transaminase YP_002633731.1 638790 R 396513 CDS YP_002633732.1 224476126 7551691 complement(639791..641050) 1 NC_012121.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 641050 hisD 7551691 hisD Staphylococcus carnosus subsp. carnosus TM300 histidinol dehydrogenase YP_002633732.1 639791 R 396513 CDS YP_002633733.1 224476127 7551692 complement(641040..641657) 1 NC_012121.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 641657 hisG 7551692 hisG Staphylococcus carnosus subsp. carnosus TM300 ATP phosphoribosyltransferase catalytic subunit YP_002633733.1 641040 R 396513 CDS YP_002633734.1 224476128 7551694 complement(641670..642500) 1 NC_012121.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 642500 hisZ 7551694 hisZ Staphylococcus carnosus subsp. carnosus TM300 ATP phosphoribosyltransferase regulatory subunit YP_002633734.1 641670 R 396513 CDS YP_002633735.1 224476129 7551698 complement(642676..643491) 1 NC_012121.1 (P22862) Arylesterase (EC 3.1.1.2) (Aryl-ester hydrolase),InterPro: Alpha/beta hydrolase fold; Hypothetical protein; putative alpha/beta fold family hydrolase 643491 7551698 Sca_0638 Staphylococcus carnosus subsp. carnosus TM300 putative alpha/beta fold family hydrolase YP_002633735.1 642676 R 396513 CDS YP_002633736.1 224476130 7550190 643690..643941 1 NC_012121.1 Similarity to N-terminal part of transcriptional regulator [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300184).; Hypothetical protein; transcriptional regulator 643941 7550190 Sca_0639 Staphylococcus carnosus subsp. carnosus TM300 transcriptional regulator YP_002633736.1 643690 D 396513 CDS YP_002633737.1 224476131 7550191 644330..644683 1 NC_012121.1 similar to amino-terminal part of hypothetical protein CdifQ_02000652 [Clostridium difficile QCD-32g58] ZP_01232326; Hypothetical protein; Fic protein family protein (fragment 1) 644683 7550191 Sca_0640 Staphylococcus carnosus subsp. carnosus TM300 Fic protein family protein (fragment 1) YP_002633737.1 644330 D 396513 CDS YP_002633738.1 224476132 7550192 644716..645051 1 NC_012121.1 similar to carboxy-terminal part of hypothetical protein CdifQ_02000652 [Clostridium difficile QCD-32g58] ZP_01232326; Hypothetical protein; Fic protein family protein (fragment 2) 645051 7550192 Sca_0641 Staphylococcus carnosus subsp. carnosus TM300 Fic protein family protein (fragment 2) YP_002633738.1 644716 D 396513 CDS YP_002633739.1 224476133 7552207 complement(646055..646627) 1 NC_012121.1 (P40396) Competence transcription factor (CTF) (Competence protein K); Hypothetical protein; putative ComK family protein 646627 7552207 Sca_0642 Staphylococcus carnosus subsp. carnosus TM300 putative ComK family protein YP_002633739.1 646055 R 396513 CDS YP_002633740.1 224476134 7550194 646840..647058 1 NC_012121.1 (O31594) Hypothetical protein yhzC; Hypothetical protein; hypothetical protein 647058 7550194 Sca_0643 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633740.1 646840 D 396513 CDS YP_002633741.1 224476135 7550195 complement(647138..648124) 1 NC_012121.1 (P47512) Probable lipoate-protein ligase A (EC 6.3.2.-),InterPro: Lipoyltransferase and lipoate-protein ligase; Hypothetical protein; putative lipoate-protein ligase 648124 7550195 Sca_0644 Staphylococcus carnosus subsp. carnosus TM300 putative lipoate-protein ligase YP_002633741.1 647138 R 396513 CDS YP_002633742.1 224476136 7550196 648328..648513 1 NC_012121.1 Hypothetical protein; hypothetical protein 648513 7550196 Sca_0645 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633742.1 648328 D 396513 CDS YP_002633743.1 224476137 7550197 648520..649122 1 NC_012121.1 Hypothetical protein; hypothetical protein 649122 7550197 Sca_0646 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633743.1 648520 D 396513 CDS YP_002633744.1 224476138 7550198 complement(649182..649388) 1 NC_012121.1 Hypothetical protein; hypothetical protein 649388 7550198 Sca_0647 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633744.1 649182 R 396513 CDS YP_002633745.1 224476139 7550199 complement(649401..649610) 1 NC_012121.1 InterPro: TM2; Hypothetical protein; hypothetical protein 649610 7550199 Sca_0648 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633745.1 649401 R 396513 CDS YP_002633746.1 224476140 7550200 649848..650417 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 650417 7550200 Sca_0649 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633746.1 649848 D 396513 CDS YP_002633747.1 224476141 7550201 complement(650446..651384) 1 NC_012121.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 651384 7550201 Sca_0650 Staphylococcus carnosus subsp. carnosus TM300 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_002633747.1 650446 R 396513 CDS YP_002633748.1 224476142 7550202 651606..652958 1 NC_012121.1 (Q51508) Salicylate biosynthesis isochorismate synthase (EC 5.4.4.2) (Isochorismate mutase),InterPro: Isochorismate synthase; Hypothetical protein; putative menaquinone-specific isochorismate synthase 652958 menF 7550202 menF Staphylococcus carnosus subsp. carnosus TM300 putative menaquinone-specific isochorismate synthase YP_002633748.1 651606 D 396513 CDS YP_002633749.1 224476143 7551773 652951..654618 1 NC_012121.1 (P23970) Menaquinone biosynthesis protein menD [Includes: 2-succinyl-6-hydroxy-24-cyclohexadiene-1-carboxylate synthase (EC 2.5.1.64) (SHCHC synthase); 2-oxoglutarate decarboxylase (EC 4.1.1.71) (Alpha-ketoglutarate decarboxylase) (KDC)],InterPro: Menaquinone biosynthesis protein; Hypothetical protein; putative menaquinone biosynthesis protein MenD 654618 menD 7551773 menD Staphylococcus carnosus subsp. carnosus TM300 putative menaquinone biosynthesis protein MenD YP_002633749.1 652951 D 396513 CDS YP_002633750.1 224476144 7551771 654611..655426 1 NC_012121.1 (P23974) Putative esterase ytxM (EC 3.1.-.-),InterPro: Alpha/beta hydrolase fold; Hypothetical protein; putative hydrolase 655426 7551771 Sca_0653 Staphylococcus carnosus subsp. carnosus TM300 putative hydrolase YP_002633750.1 654611 D 396513 CDS YP_002633751.1 224476145 7550203 655419..656237 1 NC_012121.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 656237 menB 7550203 menB Staphylococcus carnosus subsp. carnosus TM300 naphthoate synthase YP_002633751.1 655419 D 396513 CDS YP_002633752.1 224476146 7551770 656552..656911 1 NC_012121.1 (O34777) Organic hydroperoxide resistance transcriptional regulator,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; putative MarR type transcriptional regulator 656911 7551770 Sca_0655 Staphylococcus carnosus subsp. carnosus TM300 putative MarR type transcriptional regulator YP_002633752.1 656552 D 396513 CDS YP_002633753.1 224476147 7550204 complement(657137..658300) 1 NC_012121.1 (P16524) Putative aminotransferase A (EC 2.6.1.-),InterPro: Aminotransferase class I and II; Hypothetical protein; putative aminotransferase 658300 7550204 Sca_0656 Staphylococcus carnosus subsp. carnosus TM300 putative aminotransferase YP_002633753.1 657137 R 396513 CDS YP_002633754.1 224476148 7550205 complement(658451..659455) 1 NC_012121.1 (Q52778) Nodulation protein nolL (EC 2.3.1.-),InterPro: Acyltransferase 3 family; Hypothetical protein; hypothetical protein 659455 7550205 Sca_0657 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633754.1 658451 R 396513 CDS YP_002633755.1 224476149 7550206 659810..660229 1 NC_012121.1 (P96708) Putative HTH-type transcriptional regulator ydgJ,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; putative MarR type transcriptional regulator 660229 7550206 Sca_0658 Staphylococcus carnosus subsp. carnosus TM300 putative MarR type transcriptional regulator YP_002633755.1 659810 D 396513 CDS YP_002633756.1 224476150 7550207 complement(660338..664102) 1 NC_012121.1 (P52081) Bifunctional autolysin precursor [Includes: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28); Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (EC 3.2.1.96)],InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Hypothetical protein; bifunctional peptidoglycan hydrolase 664102 bph 7550207 bph Staphylococcus carnosus subsp. carnosus TM300 bifunctional peptidoglycan hydrolase YP_002633756.1 660338 R 396513 CDS YP_002633757.1 224476151 7551342 complement(664567..664989) 1 NC_012121.1 (P52080) Hypothetical UPF0039 protein SAV1054/SA0906/MW0937 (ORF3),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative acetyltransferase (GNAT) family protein 664989 7551342 Sca_0661 Staphylococcus carnosus subsp. carnosus TM300 putative acetyltransferase (GNAT) family protein YP_002633757.1 664567 R 396513 CDS YP_002633758.1 224476152 7550208 complement(665095..665568) 1 NC_012121.1 (P52079) Hypothetical protein SAV1055/SA0907/MW0938 (ORF2); Hypothetical protein; hypothetical protein 665568 7550208 Sca_0662 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633758.1 665095 R 396513 CDS YP_002633759.1 224476153 7550209 complement(665587..666897) 1 NC_012121.1 (Q81K33) Membrane-bound protein lytR,InterPro: Cell envelope-related transcriptional attenuator; Hypothetical protein; putative membrane anchored protein with LytR_cpsA_psr domain 666897 7550209 Sca_0663 Staphylococcus carnosus subsp. carnosus TM300 putative membrane anchored protein with LytR_cpsA_psr domain YP_002633759.1 665587 R 396513 CDS YP_002633760.1 224476154 7550210 667298..668950 1 NC_012121.1 (P18159) Probable phosphomannomutase (EC 5.4.2.8) (PMM),InterPro: Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; Hypothetical protein; putative phosphomannomutase 668950 7550210 Sca_0664 Staphylococcus carnosus subsp. carnosus TM300 putative phosphomannomutase YP_002633760.1 667298 D 396513 CDS YP_002633761.1 224476155 7550211 669014..670177 1 NC_012121.1 (P05364) Beta-lactamase precursor (EC 3.5.2.6) (Cephalosporinase),InterPro: Beta-lactamase; Hypothetical protein; autolysis and methicillin resistant-like protein 670177 7550211 Sca_0665 Staphylococcus carnosus subsp. carnosus TM300 autolysis and methicillin resistant-like protein YP_002633761.1 669014 D 396513 CDS YP_002633762.1 224476156 7550212 670328..670942 1 NC_012121.1 Reporting signal peptide (SignalP 3.0); Hypothetical protein; hypothetical protein 670942 7550212 Sca_0666 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633762.1 670328 D 396513 CDS YP_002633763.1 224476157 7550213 671245..671577 1 NC_012121.1 (P23532) PTS system lactose-specific IIA component (EIIA-Lac) (Lactose-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Lac),InterPro: Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; Hypothetical protein; putative lactose-specific enzyme IIA 671577 lacF 7550213 lacF Staphylococcus carnosus subsp. carnosus TM300 putative lactose-specific enzyme IIA YP_002633763.1 671245 D 396513 CDS YP_002633764.1 224476158 7551733 671590..673290 1 NC_012121.1 (P50976) PTS system lactose-specific IIBC component (EIIBC-Lac) (Lactose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Lac),InterPro: PTS lactose/cellobiose IIC component; Hypothetical protein; putative PTS system lactose-specific component IIBC 673290 lacE 7551733 lacE Staphylococcus carnosus subsp. carnosus TM300 putative PTS system lactose-specific component IIBC YP_002633764.1 671590 D 396513 CDS YP_002633765.1 224476159 7551732 673374..674831 1 NC_012121.1 catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside; 6-phospho-beta-galactosidase 674831 lacG 7551732 lacG Staphylococcus carnosus subsp. carnosus TM300 6-phospho-beta-galactosidase YP_002633765.1 673374 D 396513 CDS YP_002633766.1 224476160 7551734 complement(674873..675274) 1 NC_012121.1 (Q9K8K8) Arsenate reductase (EC 1.20.4.1) (Arsenical pump modifier),InterPro: Low molecular weight phosphotyrosine protein phosphatase; Hypothetical protein; arsenate reductase 675274 arsC 7551734 arsC Staphylococcus carnosus subsp. carnosus TM300 arsenate reductase YP_002633766.1 674873 R 396513 CDS YP_002633767.1 224476161 7551425 complement(675290..676579) 1 NC_012121.1 (P74985) Arsenical pump membrane protein (Arsenic efflux pump protein),InterPro: Arsenical pump membrane protein; Hypothetical protein; arsenic efflux pump protein 676579 arsB 7551425 arsB Staphylococcus carnosus subsp. carnosus TM300 arsenic efflux pump protein YP_002633767.1 675290 R 396513 CDS YP_002633768.1 224476162 7551424 complement(676717..677652) 1 NC_012121.1 (Q8NVC9) Tagatose 16-diphosphate aldolase (EC 4.1.2.40) (Tagatose-bisphosphate aldolase) (D-tagatose-16-bisphosphate aldolase),InterPro: Tagatose 16-diphosphate aldolase,Tagatose 16-diphosphate aldolase Gram positive; Hypothetical protein; tagatose 1,6-diphosphate aldolase 677652 lacD 7551424 lacD Staphylococcus carnosus subsp. carnosus TM300 tagatose 1,6-diphosphate aldolase YP_002633768.1 676717 R 396513 CDS YP_002633769.1 224476163 7551731 complement(677649..678596) 1 NC_012121.1 (P26421) Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase),InterPro: Carbohydrate kinase PfkB; Hypothetical protein; putative tagatose-6-phosphate kinase 678596 lacC 7551731 lacC Staphylococcus carnosus subsp. carnosus TM300 putative tagatose-6-phosphate kinase YP_002633769.1 677649 R 396513 CDS YP_002633770.1 224476164 7551730 complement(678596..679111) 1 NC_012121.1 catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate; galactose-6-phosphate isomerase subunit LacB 679111 lacB 7551730 lacB Staphylococcus carnosus subsp. carnosus TM300 galactose-6-phosphate isomerase subunit LacB YP_002633770.1 678596 R 396513 CDS YP_002633771.1 224476165 7551729 complement(679130..679561) 1 NC_012121.1 (P26423) Galactose-6-phosphate isomerase lacA subunit (EC 5.3.1.26),InterPro: Ribose/galactose isomerase; Hypothetical protein; putative galactose-6-phosphate isomerase LacA subunit 679561 lacA 7551729 lacA Staphylococcus carnosus subsp. carnosus TM300 putative galactose-6-phosphate isomerase LacA subunit YP_002633771.1 679130 R 396513 CDS YP_002633772.1 224476166 7551728 complement(679753..680505) 1 NC_012121.1 (P18816) Lactose phosphotransferase system repressor,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein; putative lactose phosphotransferase system repressor lacR 680505 lacR 7551728 lacR Staphylococcus carnosus subsp. carnosus TM300 putative lactose phosphotransferase system repressor lacR YP_002633772.1 679753 R 396513 CDS YP_002633773.1 224476167 7551737 complement(680586..681494) 1 NC_012121.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; ribonucleoside hydrolase RihC 681494 7551737 Sca_0677 Staphylococcus carnosus subsp. carnosus TM300 ribonucleoside hydrolase RihC YP_002633773.1 680586 R 396513 CDS YP_002633774.1 224476168 7550214 complement(681622..681912) 1 NC_012121.1 (P34959) Quinol oxidase polypeptide IV (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxD),InterPro: Prokaryotic Cytochrome C oxidase subunit IV; Hypothetical protein; putative quinol oxidase polypeptide IV 681912 qoxD 7550214 qoxD Staphylococcus carnosus subsp. carnosus TM300 putative quinol oxidase polypeptide IV YP_002633774.1 681622 R 396513 CDS YP_002633775.1 224476169 7552004 complement(681909..682511) 1 NC_012121.1 (P34958) Quinol oxidase polypeptide III (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxC) (Oxidase aa(3)-600 subunit 3),InterPro: Cytochrome c oxidase subunit III; Hypothetical protein; putative quinol oxidase polypeptide III 682511 qoxC 7552004 qoxC Staphylococcus carnosus subsp. carnosus TM300 putative quinol oxidase polypeptide III YP_002633775.1 681909 R 396513 CDS YP_002633776.1 224476170 7552003 complement(682504..684486) 1 NC_012121.1 (P34956) Quinol oxidase polypeptide I (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxB) (Oxidase aa(3)-600 subunit 1),InterPro: Cytochrome c oxidase subunit I; Hypothetical protein; quinol oxidase polypeptide I QoxB 684486 qoxB 7552003 qoxB Staphylococcus carnosus subsp. carnosus TM300 quinol oxidase polypeptide I QoxB YP_002633776.1 682504 R 396513 CDS YP_002633777.1 224476171 7552002 complement(684486..685598) 1 NC_012121.1 (P34957) Quinol oxidase polypeptide II precursor (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxA) (Oxidase aa(3)-600 subunit 2),InterPro: Cytochrome aa3-600 quinol oxidase subunit II; Hypothetical protein; putative quinol oxidase polypeptide II QoxA 685598 qoxA 7552002 qoxA Staphylococcus carnosus subsp. carnosus TM300 putative quinol oxidase polypeptide II QoxA YP_002633777.1 684486 R 396513 CDS YP_002633778.1 224476172 7552001 complement(685898..686215) 1 NC_012121.1 Predicted signal peptide (SignalP 3.0) aa 1..26; Hypothetical protein; putative secreted protein 686215 7552001 Sca_0682 Staphylococcus carnosus subsp. carnosus TM300 putative secreted protein YP_002633778.1 685898 R 396513 CDS YP_002633779.1 224476173 7550215 686604..687752 1 NC_012121.1 (P24232) Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Dihydropteridine reductase) (EC 1.5.1.34) (Ferrisiderophore reductase B) (Nitric oxide dioxygenase) (EC 1.14.12.17) (NOD),InterPro: Globin; Hypothetical protein; putative flavohemoprotein 687752 7550215 Sca_0683 Staphylococcus carnosus subsp. carnosus TM300 putative flavohemoprotein YP_002633779.1 686604 D 396513 CDS YP_002633780.1 224476174 7550216 687874..688950 1 NC_012121.1 (P32153) Putative frv operon protein frvX,InterPro: Peptidase M42; Hypothetical protein; putative peptidase 688950 7550216 Sca_0684 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase YP_002633780.1 687874 D 396513 CDS YP_002633781.1 224476175 7550217 complement(689074..689931) 1 NC_012121.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 689931 folD 7550217 folD Staphylococcus carnosus subsp. carnosus TM300 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002633781.1 689074 R 396513 CDS YP_002633782.1 224476176 7551588 690146..690622 1 NC_012121.1 (P12044) Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) (AIR carboxylase) (AIRC),InterPro: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; Hypothetical protein; phosphoribosylaminoimidazole carboxylase catalytic subunit 690622 purE 7551588 purE Staphylococcus carnosus subsp. carnosus TM300 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002633782.1 690146 D 396513 CDS YP_002633783.1 224476177 7551975 690609..691736 1 NC_012121.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 691736 purK 7551975 purK Staphylococcus carnosus subsp. carnosus TM300 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_002633783.1 690609 D 396513 CDS YP_002633784.1 224476178 7551978 691736..692440 1 NC_012121.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 692440 purC 7551978 purC Staphylococcus carnosus subsp. carnosus TM300 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002633784.1 691736 D 396513 CDS YP_002633785.1 224476179 7551973 692440..692706 1 NC_012121.1 (P12049) Hypothetical UPF0062 protein yexA,InterPro: Protein of unknown function UPF0062; Hypothetical protein; putative phosphoribosylformylglycinamidine synthase, PurS component 692706 purS 7551973 purS Staphylococcus carnosus subsp. carnosus TM300 putative phosphoribosylformylglycinamidine synthase, PurS component YP_002633785.1 692440 D 396513 CDS YP_002633786.1 224476180 7551984 692706..693377 1 NC_012121.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 693377 purQ 7551984 purQ Staphylococcus carnosus subsp. carnosus TM300 phosphoribosylformylglycinamidine synthase I YP_002633786.1 692706 D 396513 CDS YP_002633787.1 224476181 7551982 693370..695559 1 NC_012121.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 695559 purL 7551982 purL Staphylococcus carnosus subsp. carnosus TM300 phosphoribosylformylglycinamidine synthase II YP_002633787.1 693370 D 396513 CDS YP_002633788.1 224476182 7551979 695538..696959 1 NC_012121.1 (P00497) Amidophosphoribosyltransferase precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase),InterPro: Amidophosphoribosyl transferase; Hypothetical protein; putative amidophosphoribosyltransferase PurF 696959 purF 7551979 purF Staphylococcus carnosus subsp. carnosus TM300 putative amidophosphoribosyltransferase PurF YP_002633788.1 695538 D 396513 CDS YP_002633789.1 224476183 7551976 696964..698001 1 NC_012121.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 698001 purM 7551976 purM Staphylococcus carnosus subsp. carnosus TM300 phosphoribosylaminoimidazole synthetase YP_002633789.1 696964 D 396513 CDS YP_002633790.1 224476184 7551980 697998..698564 1 NC_012121.1 (Q8NX89) Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (GART) (GAR transformylase) (5-phosphoribosylglycinamide transformylase),InterPro: Phosphoribosylglycinamide formyltransferase; Hypothetical protein; putative phosphoribosylglycinamide formyltransferase PurN 698564 purN 7551980 purN Staphylococcus carnosus subsp. carnosus TM300 putative phosphoribosylglycinamide formyltransferase PurN YP_002633790.1 697998 D 396513 CDS YP_002633791.1 224476185 7551981 698582..700060 1 NC_012121.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 700060 purH 7551981 purH Staphylococcus carnosus subsp. carnosus TM300 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002633791.1 698582 D 396513 CDS YP_002633792.1 224476186 7551977 700085..701332 1 NC_012121.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 701332 purD 7551977 purD Staphylococcus carnosus subsp. carnosus TM300 phosphoribosylamine--glycine ligase YP_002633792.1 700085 D 396513 CDS YP_002633793.1 224476187 7551974 complement(701522..701746) 1 NC_012121.1 Hypothetical protein; hypothetical protein 701746 7551974 Sca_0697 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633793.1 701522 R 396513 CDS YP_002633794.1 224476188 7550218 complement(701972..702766) 1 NC_012121.1 (P75357) Hypothetical protein MG302 homolog (A05_orf317),InterPro: Cobalt transport protein; Hypothetical protein; putative cobalt transport system permease 702766 7550218 Sca_0698 Staphylococcus carnosus subsp. carnosus TM300 putative cobalt transport system permease YP_002633794.1 701972 R 396513 CDS YP_002633795.1 224476189 7550219 complement(702759..704168) 1 NC_012121.1 (Q58488) Probable cobalt transport ATP-binding protein cbiO,InterPro: ABC transporter; Hypothetical protein; putative ABC-type cobalt transport system ATPase 704168 7550219 Sca_0699 Staphylococcus carnosus subsp. carnosus TM300 putative ABC-type cobalt transport system ATPase YP_002633795.1 702759 R 396513 CDS YP_002633796.1 224476190 7550220 complement(704181..704756) 1 NC_012121.1 Hypothetical protein; hypothetical protein 704756 7550220 Sca_0700 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633796.1 704181 R 396513 CDS YP_002633797.1 224476191 7550221 705214..706515 1 NC_012121.1 Hypothetical protein; hypothetical protein 706515 7550221 Sca_0701 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633797.1 705214 D 396513 CDS YP_002633798.1 224476192 7550222 706632..707819 1 NC_012121.1 (P75876) Hypothetical UPF0064 protein yccW,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein; putative SAM methyltransferase 707819 7550222 Sca_0702 Staphylococcus carnosus subsp. carnosus TM300 putative SAM methyltransferase YP_002633798.1 706632 D 396513 CDS YP_002633799.1 224476193 7550223 707834..708394 1 NC_012121.1 Hypothetical protein; hypothetical protein 708394 7550223 Sca_0703 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633799.1 707834 D 396513 CDS YP_002633800.1 224476194 7550224 708543..708809 1 NC_012121.1 (P23534) Phosphocarrier protein HPr (Histidine-containing protein),InterPro: Phosphocarrier HPr protein,Has been sequenced previously in S. carnosus; Hypothetical protein; phosphocarrier protein HPr 708809 ptsH 7550224 ptsH Staphylococcus carnosus subsp. carnosus TM300 phosphocarrier protein HPr YP_002633800.1 708543 D 396513 CDS YP_002633801.1 224476195 7551969 708811..710532 1 NC_012121.1 phosphoenolpyruvate-protein phosphatase 710532 ptsI 7551969 ptsI Staphylococcus carnosus subsp. carnosus TM300 phosphoenolpyruvate-protein phosphatase YP_002633801.1 708811 D 396513 CDS YP_002633802.1 224476196 7551970 complement(710875..711108) 1 NC_012121.1 (Q47414) Glutaredoxin-like protein nrdH; Hypothetical protein; putative glutaredoxin 711108 7551970 Sca_0706 Staphylococcus carnosus subsp. carnosus TM300 putative glutaredoxin YP_002633802.1 710875 R 396513 CDS YP_002633803.1 224476197 7550225 711334..712689 1 NC_012121.1 (P94364) Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-),InterPro: Cytochrome bd ubiquinol oxidase subunit I; Hypothetical protein; putative cytochrome D ubiquinol oxidase subunit I 712689 7550225 Sca_0707 Staphylococcus carnosus subsp. carnosus TM300 putative cytochrome D ubiquinol oxidase subunit I YP_002633803.1 711334 D 396513 CDS YP_002633804.1 224476198 7550226 712686..713717 1 NC_012121.1 (Q9KPG4) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase); Hypothetical protein; putative cytochrome D ubiquinol oxidase subunit II 713717 7550226 Sca_0708 Staphylococcus carnosus subsp. carnosus TM300 putative cytochrome D ubiquinol oxidase subunit II YP_002633804.1 712686 D 396513 CDS YP_002633805.1 224476199 7550227 713816..714475 1 NC_012121.1 (P39760) Hypothetical protein ykqB (ORF4),InterPro: TrkA-N; Hypothetical protein; TrkA_N, TrkA_C family protein 714475 7550227 Sca_0709 Staphylococcus carnosus subsp. carnosus TM300 TrkA_N, TrkA_C family protein YP_002633805.1 713816 D 396513 CDS YP_002633806.1 224476200 7550228 complement(714623..715168) 1 NC_012121.1 (P42404) Hypothetical protein yckF,InterPro: Sugar isomerase (SIS); Hypothetical protein; putative hexose phosphate isomerase 715168 7550228 Sca_0710 Staphylococcus carnosus subsp. carnosus TM300 putative hexose phosphate isomerase YP_002633806.1 714623 R 396513 CDS YP_002633807.1 224476201 7550229 complement(715170..715802) 1 NC_012121.1 (P39304) Probable hexulose-6-phosphate synthase (EC 4.1.2.-) (HUMPS) (D-arabino 3-hexulose 6-phosphate formaldehyde lyase),InterPro: Orotidine 5-phosphate decarboxylase; Hypothetical protein; putative hexulose-6-phosphate synthase 715802 7550229 Sca_0711 Staphylococcus carnosus subsp. carnosus TM300 putative hexulose-6-phosphate synthase YP_002633807.1 715170 R 396513 CDS YP_002633808.1 224476202 7550230 716028..716372 1 NC_012121.1 (P42406) Hypothetical UPF0087 protein yckH,InterPro: Protein of unknown function DUF24; Hypothetical protein; putative transcriptional regulator 716372 7550230 Sca_0712 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002633808.1 716028 D 396513 CDS YP_002633809.1 224476203 7550231 complement(716428..718380) 1 NC_012121.1 (Q45493) Hypothetical UPF0036 protein ykqC,InterPro: Conserved hypothetical protein MG423; Hypothetical protein; putative metallo-beta-lactamase superfamily hydrolase 718380 7550231 Sca_0713 Staphylococcus carnosus subsp. carnosus TM300 putative metallo-beta-lactamase superfamily hydrolase YP_002633809.1 716428 R 396513 CDS YP_002633810.1 224476204 7550232 complement(718380..718595) 1 NC_012121.1 Hypothetical protein; hypothetical protein 718595 7550232 Sca_0714 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633810.1 718380 R 396513 CDS YP_002633811.1 224476205 7550233 719052..719501 1 NC_012121.1 Hypothetical protein; hypothetical protein 719501 7550233 Sca_0716 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633811.1 719052 D 396513 CDS YP_002633812.1 224476206 7550234 complement(719619..720173) 1 NC_012121.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 720173 def 7550234 def Staphylococcus carnosus subsp. carnosus TM300 peptide deformylase YP_002633812.1 719619 R 396513 CDS YP_002633813.1 224476207 7551915 720298..720930 1 NC_012121.1 (P15215) Laminin gamma-1 chain precursor (Laminin B2 chain); Hypothetical protein; putative lipoprotein 720930 7551915 Sca_0718 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633813.1 720298 D 396513 CDS YP_002633814.1 224476208 7550235 721099..722211 1 NC_012121.1 (P60089) Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1),InterPro: Dehydrogenase E1 component; Hypothetical protein; pyruvate dehydrogenase E1 component subunit alpha 722211 pdhA 7550235 pdhA Staphylococcus carnosus subsp. carnosus TM300 pyruvate dehydrogenase E1 component subunit alpha YP_002633814.1 721099 D 396513 CDS YP_002633815.1 224476209 7551916 722215..723192 1 NC_012121.1 (Q8CPN2) Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1),InterPro: Transketolase central region; Hypothetical protein; pyruvate dehydrogenase E1 component subunit beta 723192 pdhB 7551916 pdhB Staphylococcus carnosus subsp. carnosus TM300 pyruvate dehydrogenase E1 component subunit beta YP_002633815.1 722215 D 396513 CDS YP_002633816.1 224476210 7551917 723539..724879 1 NC_012121.1 (Q99V06) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex),InterPro: Catalytic domain of components of various dehydrogenase complexes; Hypothetical protein; branched-chain alpha-keto acid dehydrogenase subunit E2 724879 pdhC 7551917 pdhC Staphylococcus carnosus subsp. carnosus TM300 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_002633816.1 723539 D 396513 CDS YP_002633817.1 224476211 7551918 724883..726289 1 NC_012121.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 726289 pdhD 7551918 pdhD Staphylococcus carnosus subsp. carnosus TM300 dihydrolipoamide dehydrogenase YP_002633817.1 724883 D 396513 CDS YP_002633818.1 224476212 7551919 726424..726699 1 NC_012121.1 (Q8CT12) Hypothetical UPF0223 protein SE0795,InterPro: Protein of unknown function UPF0223; Hypothetical protein; hypothetical protein 726699 7551919 Sca_0723 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633818.1 726424 D 396513 CDS YP_002633819.1 224476213 7550236 726826..727365 1 NC_012121.1 (P38522) Putative HTH-type transcriptional regulator ycjC,InterPro: Helix-turn-helix motif; Hypothetical protein; putative DNA binding protein 727365 7550236 Sca_0724 Staphylococcus carnosus subsp. carnosus TM300 putative DNA binding protein YP_002633819.1 726826 D 396513 CDS YP_002633820.1 224476214 7550237 727377..728480 1 NC_012121.1 (P23858) Spermidine/putrescine transport ATP-binding protein potA,InterPro: Spermidine/putrescine ABC transporter ATP-binding subunit; Hypothetical protein; putative spermidine/putrescine import ATP-binding protein PotA 728480 potA 7550237 potA Staphylococcus carnosus subsp. carnosus TM300 putative spermidine/putrescine import ATP-binding protein PotA YP_002633820.1 727377 D 396513 CDS YP_002633821.1 224476215 7551948 728464..729270 1 NC_012121.1 (Q56060) Spermidine/putrescine transport system permease protein potB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative spermidine/putrescine transport system permease potB 729270 potB 7551948 potB Staphylococcus carnosus subsp. carnosus TM300 putative spermidine/putrescine transport system permease potB YP_002633821.1 728464 D 396513 CDS YP_002633822.1 224476216 7551949 729267..730079 1 NC_012121.1 (Q83RR7) Spermidine/putrescine transport system permease protein potC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative spermidine/putrescine transport system permease PotC 730079 potC 7551949 potC Staphylococcus carnosus subsp. carnosus TM300 putative spermidine/putrescine transport system permease PotC YP_002633822.1 729267 D 396513 CDS YP_002633823.1 224476217 7551950 730076..731149 1 NC_012121.1 (P45168) Spermidine/putrescine-binding periplasmic protein 1 precursor (SPBP),InterPro: Bacterial extracellular solute-binding protein family 1; Hypothetical protein; putative spermidine/putrescine-binding protein PotD 731149 potD 7551950 potD Staphylococcus carnosus subsp. carnosus TM300 putative spermidine/putrescine-binding protein PotD YP_002633823.1 730076 D 396513 CDS YP_002633824.1 224476218 7551951 731180..732364 1 NC_012121.1 (P26019) DNA polymerase alpha catalytic subunit (EC 2.7.7.7); Hypothetical protein; hypothetical protein 732364 7551951 Sca_0729 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633824.1 731180 D 396513 CDS YP_002633825.1 224476219 7550238 732631..733431 1 NC_012121.1 (Q02100) CRE-binding bZIP protein SKO1; Hypothetical protein; hypothetical protein 733431 7550238 Sca_0730 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633825.1 732631 D 396513 CDS YP_002633826.1 224476220 7550239 complement(733483..734826) 1 NC_012121.1 (Q93V04) Manganese transport protein mntH (Hop-inducible cation transporter),InterPro: Natural resistance-associated macrophage protein; Hypothetical protein; manganese transport protein MntH 734826 7550239 Sca_0731 Staphylococcus carnosus subsp. carnosus TM300 manganese transport protein MntH YP_002633826.1 733483 R 396513 CDS YP_002633827.1 224476221 7550240 complement(735032..735643) 1 NC_012121.1 Hypothetical protein; hypothetical protein 735643 7550240 Sca_0732 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633827.1 735032 R 396513 CDS YP_002633828.1 224476222 7550241 735805..736626 1 NC_012121.1 (Q45499) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase) (Inositol-1-phosphatase) (I-1-Pase),InterPro: Inositol monophosphatase; Hypothetical protein; putative inositol monophosphatase 736626 7550241 Sca_0733 Staphylococcus carnosus subsp. carnosus TM300 putative inositol monophosphatase YP_002633828.1 735805 D 396513 CDS YP_002633829.1 224476223 7550242 complement(736790..736981) 1 NC_012121.1 (O07630) Hypothetical protein ylaF; Hypothetical protein; hypothetical protein 736981 7550242 Sca_0734 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633829.1 736790 R 396513 CDS YP_002633830.1 224476224 7550243 737076..738923 1 NC_012121.1 (O07631) GTP-binding protein typA/bipA homolog,InterPro: GTP-binding protein TypA; Hypothetical protein; putative GTP-binding protein family protein TypA 738923 typA 7550243 typA Staphylococcus carnosus subsp. carnosus TM300 putative GTP-binding protein family protein TypA YP_002633830.1 737076 D 396513 CDS YP_002633831.1 224476225 7552274 complement(739054..739242) 1 NC_012121.1 (O07633) Hypothetical protein ylaI; Hypothetical protein; hypothetical protein 739242 7552274 Sca_0736 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633831.1 739054 R 396513 CDS YP_002633832.1 224476226 7550244 complement(739244..739726) 1 NC_012121.1 (O07636) Hypothetical protein ylaL; Hypothetical protein; hypothetical protein 739726 7550244 Sca_0737 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633832.1 739244 R 396513 CDS YP_002633833.1 224476227 7550245 739863..740138 1 NC_012121.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; putative ligand binding protein; hypothetical protein 740138 7550245 Sca_0738 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633833.1 739863 D 396513 CDS YP_002633834.1 224476228 7550246 740382..741602 1 NC_012121.1 (O07639) Hypothetical protein ylaO,InterPro: Cell cycle protein; Hypothetical protein; putative cell division protein 741602 7550246 Sca_0739 Staphylococcus carnosus subsp. carnosus TM300 putative cell division protein YP_002633834.1 740382 D 396513 CDS YP_002633835.1 224476229 7550247 742029..745478 1 NC_012121.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 745478 pyc 7550247 pyc Staphylococcus carnosus subsp. carnosus TM300 pyruvate carboxylase YP_002633835.1 742029 D 396513 CDS YP_002633836.1 224476230 7551987 complement(745608..746534) 1 NC_012121.1 (P12946) Cytochrome AA3 controlling protein,InterPro: Cytochrome oxidase assembly; Hypothetical protein; putative heme A synthase CtaA 746534 ctaA 7551987 ctaA Staphylococcus carnosus subsp. carnosus TM300 putative heme A synthase CtaA YP_002633836.1 745608 R 396513 CDS YP_002633837.1 224476231 7551488 746807..747718 1 NC_012121.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 747718 ctaB 7551488 ctaB Staphylococcus carnosus subsp. carnosus TM300 protoheme IX farnesyltransferase YP_002633837.1 746807 D 396513 CDS YP_002633838.1 224476232 7551489 747744..748205 1 NC_012121.1 (Q04453) Hypothetical 21.0 kDa protein in ctaF 3region (ORF1),InterPro: Protein of unknown function DUF420; Hypothetical protein; hypothetical protein 748205 7551489 Sca_0743 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633838.1 747744 D 396513 CDS YP_002633839.1 224476233 7550248 748340..749380 1 NC_012121.1 Hypothetical protein; hypothetical protein 749380 7550248 Sca_0744 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633839.1 748340 D 396513 CDS YP_002633840.1 224476234 7550249 749401..749841 1 NC_012121.1 (O34412) Regulatory protein ylbF; Hypothetical protein; regulatory protein YlbF 749841 7550249 Sca_0745 Staphylococcus carnosus subsp. carnosus TM300 regulatory protein YlbF YP_002633840.1 749401 D 396513 CDS YP_002633841.1 224476235 7550250 complement(749951..750877) 1 NC_012121.1 (P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase; Hypothetical protein; putative glycerophosphoryl diester phosphodiesterase 750877 7550250 Sca_0746 Staphylococcus carnosus subsp. carnosus TM300 putative glycerophosphoryl diester phosphodiesterase YP_002633841.1 749951 R 396513 CDS YP_002633842.1 224476236 7550251 751012..751266 1 NC_012121.1 (Q8CSZ8) Hypothetical UPF0298 protein SE0821; Hypothetical protein; hypothetical protein 751266 7550251 Sca_0747 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633842.1 751012 D 396513 CDS YP_002633843.1 224476237 7550252 complement(751349..751708) 1 NC_012121.1 Hypothetical protein; hypothetical protein 751708 7550252 Sca_0748 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633843.1 751349 R 396513 CDS YP_002633844.1 224476238 7550253 751770..752321 1 NC_012121.1 (P44869) Putative methylase HI0767 (EC 2.1.1.-),InterPro: Conserved hypothetical protein 95; Hypothetical protein; hypothetical protein 752321 7550253 Sca_0749 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633844.1 751770 D 396513 CDS YP_002633845.1 224476239 7550254 752314..752799 1 NC_012121.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 752799 coaD 7550254 coaD Staphylococcus carnosus subsp. carnosus TM300 phosphopantetheine adenylyltransferase YP_002633845.1 752314 D 396513 CDS YP_002633846.1 224476240 7551479 complement(752947..753897) 1 NC_012121.1 (Q28488) Mu-crystallin,InterPro: Ornithine cyclodeaminase/mu-crystallin; Hypothetical protein; putative ornithine cyclodeaminase 753897 7551479 Sca_0751 Staphylococcus carnosus subsp. carnosus TM300 putative ornithine cyclodeaminase YP_002633846.1 752947 R 396513 CDS YP_002633847.1 224476241 7550255 complement(753914..755062) 1 NC_012121.1 (P10486) Type I restriction enzyme EcoR124II R protein (EC 3.1.21.3) (R.EcoR124II),InterPro: Protein of unknown function DUF795; Hypothetical protein; hypothetical protein 755062 7550255 Sca_0752 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633847.1 753914 R 396513 CDS YP_002633848.1 224476242 7550256 755190..755723 1 NC_012121.1 InterPro: Protein of unknown function DUF177; Hypothetical protein; hypothetical protein 755723 7550256 Sca_0753 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633848.1 755190 D 396513 CDS YP_002633849.1 224476243 7550257 755824..755997 1 NC_012121.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 755997 rpmF 7550257 rpmF Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L32 YP_002633849.1 755824 D 396513 CDS YP_002633850.1 224476244 7552067 756174..756920 1 NC_012121.1 (P74261) Hypothetical tRNA/rRNA methyltransferase slr1673 (EC 2.1.1.-),InterPro: tRNA/rRNA methyltransferase (SpoU); Hypothetical protein; SpoU rRNA Methylase family protein 756920 7552067 Sca_0755 Staphylococcus carnosus subsp. carnosus TM300 SpoU rRNA Methylase family protein YP_002633850.1 756174 D 396513 CDS YP_002633851.1 224476245 7550258 757245..758303 1 NC_012121.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 758303 pheS 7550258 pheS Staphylococcus carnosus subsp. carnosus TM300 phenylalanyl-tRNA synthetase subunit alpha YP_002633851.1 757245 D 396513 CDS YP_002633852.1 224476246 7551936 758303..760708 1 NC_012121.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 760708 pheT 7551936 pheT Staphylococcus carnosus subsp. carnosus TM300 phenylalanyl-tRNA synthetase subunit beta YP_002633852.1 758303 D 396513 CDS YP_002633853.1 224476247 7551937 complement(760780..761724) 1 NC_012121.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 761724 rnhC 7551937 rnhC Staphylococcus carnosus subsp. carnosus TM300 ribonuclease HIII YP_002633853.1 760780 R 396513 CDS YP_002633854.1 224476248 7552032 762029..762295 1 NC_012121.1 (Q97H50) Flagellar hook-basal body complex protein fliE,InterPro: Protein of unknown function DUF710; Hypothetical protein; hypothetical protein 762295 7552032 Sca_0759 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633854.1 762029 D 396513 CDS YP_002633855.1 224476249 7550259 762305..762826 1 NC_012121.1 InterPro: Colicin V production protein; Hypothetical protein; hypothetical protein 762826 7550259 Sca_0760 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633855.1 762305 D 396513 CDS YP_002633856.1 224476250 7550260 762933..764657 1 NC_012121.1 (Q8K409) DNA polymerase beta (EC 2.7.7.7),InterPro: DNA polymerase family X; Hypothetical protein; hypothetical protein 764657 7550260 Sca_0761 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633856.1 762933 D 396513 CDS YP_002633857.1 224476251 7550261 764667..767015 1 NC_012121.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 767015 mutS2 7550261 mutS2 Staphylococcus carnosus subsp. carnosus TM300 recombination and DNA strand exchange inhibitor protein YP_002633857.1 764667 D 396513 CDS YP_002633858.1 224476252 7551830 767149..767463 1 NC_012121.1 (Q9ZEH4) Thioredoxin (TRX),InterPro: Thioredoxin type domain; Hypothetical protein; putative thioredoxin TrxA 767463 trxA 7551830 trxA Staphylococcus carnosus subsp. carnosus TM300 putative thioredoxin TrxA YP_002633858.1 767149 D 396513 CDS YP_002633859.1 224476253 7552270 767704..769491 1 NC_012121.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 769491 uvrC 7552270 uvrC Staphylococcus carnosus subsp. carnosus TM300 excinuclease ABC subunit C YP_002633859.1 767704 D 396513 CDS YP_002633860.1 224476254 7552292 769971..770585 1 NC_012121.1 (P08064) Succinate dehydrogenase cytochrome B-558 subunit; Hypothetical protein; succinate dehydrogenase cytochrome b-558 770585 sdhC 7552292 sdhC Staphylococcus carnosus subsp. carnosus TM300 succinate dehydrogenase cytochrome b-558 YP_002633860.1 769971 D 396513 CDS YP_002633861.1 224476255 7552119 770641..772431 1 NC_012121.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 772431 sdhA 7552119 sdhA Staphylococcus carnosus subsp. carnosus TM300 succinate dehydrogenase flavoprotein subunit YP_002633861.1 770641 D 396513 CDS YP_002633862.1 224476256 7552117 772431..773255 1 NC_012121.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 773255 sdhB 7552117 sdhB Staphylococcus carnosus subsp. carnosus TM300 succinate dehydrogenase iron-sulfur subunit YP_002633862.1 772431 D 396513 CDS YP_002633863.1 224476257 7552118 773443..774090 1 NC_012121.1 (P52575) Isoflavone reductase (EC 1.3.1.-) (IFR) (NADPH:isoflavone oxidoreductase); Hypothetical protein; hypothetical protein 774090 7552118 Sca_0768 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633863.1 773443 D 396513 CDS YP_002633864.1 224476258 7550262 774106..774495 1 NC_012121.1 (P24201) Transcriptional repressor mprA (EmrR protein),InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; putative regulatory protein 774495 7550262 Sca_0769 Staphylococcus carnosus subsp. carnosus TM300 putative regulatory protein YP_002633864.1 774106 D 396513 CDS YP_002633865.1 224476259 7550263 774698..775498 1 NC_012121.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 775498 murI 7550263 murI Staphylococcus carnosus subsp. carnosus TM300 glutamate racemase YP_002633865.1 774698 D 396513 CDS YP_002633866.1 224476260 7551826 775514..776098 1 NC_012121.1 hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 776098 7551826 Sca_0771 Staphylococcus carnosus subsp. carnosus TM300 nucleoside-triphosphatase YP_002633866.1 775514 D 396513 CDS YP_002633867.1 224476261 7550264 776095..776409 1 NC_012121.1 (P94559) Hypothetical UPF0025 protein ysnB,Note: similarity to N-terminal part of hypothetical protein SSP1643 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305](YP_301733); Hypothetical protein; hypothetical protein 776409 7550264 Sca_0772 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633867.1 776095 D 396513 CDS YP_002633868.1 224476262 7550265 776449..776604 1 NC_012121.1 Note: similarity to C-terminal part of hypothetical protein SSP1643 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305](YP_301733); Hypothetical protein; hypothetical protein 776604 7550265 Sca_0773 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633868.1 776449 D 396513 CDS YP_002633869.1 224476263 7550266 complement(776659..776838) 1 NC_012121.1 Hypothetical protein; hypothetical protein 776838 7550266 Sca_0774 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633869.1 776659 R 396513 CDS YP_002633870.1 224476264 7550267 complement(776997..777374) 1 NC_012121.1 (Q8XKU7) SsrA-binding protein,InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein; putative glyoxalase 777374 glx 7550267 glx Staphylococcus carnosus subsp. carnosus TM300 putative glyoxalase YP_002633870.1 776997 R 396513 CDS YP_002633871.1 224476265 7551652 777485..777937 1 NC_012121.1 (P16681) PhnB protein; Hypothetical protein; Glyoxalase family protein 777937 7551652 Sca_0776 Staphylococcus carnosus subsp. carnosus TM300 Glyoxalase family protein YP_002633871.1 777485 D 396513 CDS YP_002633872.1 224476266 7550268 778108..778554 1 NC_012121.1 (Q10081) Hypothetical UPF0039 protein C11D3.02c in chromosome I,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative acetyltransferase 778554 7550268 Sca_0777 Staphylococcus carnosus subsp. carnosus TM300 putative acetyltransferase YP_002633872.1 778108 D 396513 CDS YP_002633873.1 224476267 7550269 complement(778651..779034) 1 NC_012121.1 Hypothetical protein; hypothetical protein 779034 7550269 Sca_0778 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633873.1 778651 R 396513 CDS YP_002633874.1 224476268 7550270 complement(779163..779690) 1 NC_012121.1 Hypothetical protein; hypothetical protein 779690 7550270 Sca_0779 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633874.1 779163 R 396513 CDS YP_002633875.1 224476269 7550271 779875..780447 1 NC_012121.1 Hypothetical protein; putative lipoprotein 780447 7550271 Sca_0780 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633875.1 779875 D 396513 CDS YP_002633876.1 224476270 7550272 781035..781535 1 NC_012121.1 Hypothetical protein; hypothetical protein 781535 7550272 Sca_0781 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633876.1 781035 D 396513 CDS YP_002633877.1 224476271 7550273 781552..782025 1 NC_012121.1 Hypothetical protein; putative lipoprotein 782025 7550273 Sca_0782 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002633877.1 781552 D 396513 CDS YP_002633878.1 224476272 7550274 782073..783014 1 NC_012121.1 (O45244) Probable pre-mRNA splicing factor ATP-dependent RNA helicase mog-4 (Sex determination protein mog-4) (Masculinization of germ line protein 4); Hypothetical protein; hypothetical protein 783014 7550274 Sca_0783 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633878.1 782073 D 396513 CDS YP_002633879.1 224476273 7552206 783665..783799 1 NC_012121.1 Hypothetical protein; phenol soluble modulin 783799 7552206 Sca_0784 Staphylococcus carnosus subsp. carnosus TM300 phenol soluble modulin YP_002633879.1 783665 D 396513 CDS YP_002633880.1 224476274 7550276 783855..783992 1 NC_012121.1 Hypothetical protein; phenol soluble modulin 783992 7550276 Sca_0785 Staphylococcus carnosus subsp. carnosus TM300 phenol soluble modulin YP_002633880.1 783855 D 396513 CDS YP_002633881.1 224476275 7550277 complement(784040..784777) 1 NC_012121.1 (P11926) Ornithine decarboxylase (EC 4.1.1.17) (ODC); Hypothetical protein; hypothetical protein 784777 7550277 Sca_0786 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633881.1 784040 R 396513 CDS YP_002633882.1 224476276 7550278 complement(785132..785314) 1 NC_012121.1 Hypothetical protein; hypothetical protein 785314 7550278 Sca_0787 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633882.1 785132 R 396513 CDS YP_002633883.1 224476277 7550279 785520..786200 1 NC_012121.1 (P33999) Hypothetical protein yjjG,InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein; putative haloacid dehalogenase-like hydrolase 786200 7550279 Sca_0788 Staphylococcus carnosus subsp. carnosus TM300 putative haloacid dehalogenase-like hydrolase YP_002633883.1 785520 D 396513 CDS YP_002633884.1 224476278 7550280 complement(786250..786699) 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 786699 7550280 Sca_0789 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633884.1 786250 R 396513 CDS YP_002633885.1 224476279 7550281 786849..788462 1 NC_012121.1 hypothetical protein 788462 7550281 Sca_0790 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633885.1 786849 D 396513 CDS YP_002633886.1 224476280 7550282 788606..789037 1 NC_012121.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 789037 mraZ 7550282 mraZ Staphylococcus carnosus subsp. carnosus TM300 cell division protein MraZ YP_002633886.1 788606 D 396513 CDS YP_002633887.1 224476281 7551809 789052..789987 1 NC_012121.1 (Q8CSX7) S-adenosyl-methyltransferase mraW (EC 2.1.1.-),InterPro: Bacterial methyltransferase; Hypothetical protein; S-adenosyl-methyltransferase MraW 789987 mraW 7551809 mraW Staphylococcus carnosus subsp. carnosus TM300 S-adenosyl-methyltransferase MraW YP_002633887.1 789052 D 396513 CDS YP_002633888.1 224476282 7551807 790007..790411 1 NC_012121.1 putative cell division protein 790411 7551807 Sca_0793 Staphylococcus carnosus subsp. carnosus TM300 putative cell division protein YP_002633888.1 790007 D 396513 CDS YP_002633889.1 224476283 7550283 790392..792545 1 NC_012121.1 (Q07868) Penicillin-binding protein 2B (PBP-2B),InterPro: Penicillin-binding protein transpeptidase domain; Hypothetical protein; penicillin-binding protein Pbp1 792545 pbpA 7550283 pbpA Staphylococcus carnosus subsp. carnosus TM300 penicillin-binding protein Pbp1 YP_002633889.1 790392 D 396513 CDS YP_002633890.1 224476284 7551908 792644..793609 1 NC_012121.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 793609 mraY 7551908 mraY Staphylococcus carnosus subsp. carnosus TM300 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002633890.1 792644 D 396513 CDS YP_002633891.1 224476285 7551808 793613..794962 1 NC_012121.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 794962 murD 7551808 murD Staphylococcus carnosus subsp. carnosus TM300 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002633891.1 793613 D 396513 CDS YP_002633892.1 224476286 7551822 794977..795897 1 NC_012121.1 (P16655) Division initiation protein (Cell division and sporulation protein),InterPro: Cell division protein FtsQ; Hypothetical protein; putative cell division protein 795897 div1b 7551822 div1b Staphylococcus carnosus subsp. carnosus TM300 putative cell division protein YP_002633892.1 794977 D 396513 CDS YP_002633893.1 224476287 7551524 795999..797411 1 NC_012121.1 (Q99US9) Cell division protein ftsA,InterPro: Cell division protein FtsA; Hypothetical protein; putative cell division protein FtsA 797411 ftsA 7551524 ftsA Staphylococcus carnosus subsp. carnosus TM300 putative cell division protein FtsA YP_002633893.1 795999 D 396513 CDS YP_002633894.1 224476288 7551595 797441..798613 1 NC_012121.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 798613 ftsZ 7551595 ftsZ Staphylococcus carnosus subsp. carnosus TM300 cell division protein FtsZ YP_002633894.1 797441 D 396513 CDS YP_002633895.1 224476289 7551599 798843..799637 1 NC_012121.1 (Q9ZHA4) Hypothetical UPF0124 protein in ftsZ 3region,InterPro: Protein of unknown function DUF152; Hypothetical protein; hypothetical protein 799637 7551599 Sca_0800 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633895.1 798843 D 396513 CDS YP_002633896.1 224476290 7550284 799650..800324 1 NC_012121.1 (Q9CPD5) Hypothetical UPF0001 protein PM0112,InterPro: Protein of unknown function UPF0001; Hypothetical protein; hypothetical protein 800324 7550284 Sca_0801 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633896.1 799650 D 396513 CDS YP_002633897.1 224476291 7550285 800321..800950 1 NC_012121.1 (P73376) Ycf50-like protein,InterPro: Protein of unknown function DUF552; Hypothetical protein; hypothetical protein 800950 7550285 Sca_0802 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633897.1 800321 D 396513 CDS YP_002633898.1 224476292 7550286 800963..801259 1 NC_012121.1 (P25254) Hypothetical protein PA0392,InterPro: Protein of unknown function YGGT; Hypothetical protein; hypothetical protein 801259 7550286 Sca_0803 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633898.1 800963 D 396513 CDS YP_002633899.1 224476293 7550287 801495..802106 1 NC_012121.1 (P57481) Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: RNA-binding S4; Hypothetical protein; putative RNA-binding protein 802106 7550287 Sca_0804 Staphylococcus carnosus subsp. carnosus TM300 putative RNA-binding protein YP_002633899.1 801495 D 396513 CDS YP_002633900.1 224476294 7550288 802131..802748 1 NC_012121.1 (O15079) Syntaphilin,InterPro: DivIVA; Hypothetical protein; hypothetical protein 802748 7550288 Sca_0805 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633900.1 802131 D 396513 CDS YP_002633901.1 224476295 7550289 803015..805762 1 NC_012121.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 805762 ileS 7550289 ileS Staphylococcus carnosus subsp. carnosus TM300 isoleucyl-tRNA synthetase YP_002633901.1 803015 D 396513 CDS YP_002633902.1 224476296 7551713 805978..806430 1 NC_012121.1 note: similar to N-terminal part of glyoxalase family protein [Staphylococcus saprophyticus subsp.saprophyticus ATCC 15305] (YP_301667),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 1) 806430 7551713 Sca_0807 Staphylococcus carnosus subsp. carnosus TM300 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 1) YP_002633902.1 805978 D 396513 CDS YP_002633903.1 224476297 7550290 806352..806771 1 NC_012121.1 note: similar to C-terminal part of glyoxalase family protein [Staphylococcus epidermidis RP62A] (YP_188343); Hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 2) 806771 7550290 Sca_0808 Staphylococcus carnosus subsp. carnosus TM300 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 2) YP_002633903.1 806352 D 396513 CDS YP_002633904.1 224476298 7550291 806780..807268 1 NC_012121.1 (P22865) Secreted 45 kDa protein precursor,InterPro: CHAP; Hypothetical protein; secretory antigen SsaA 807268 7550291 Sca_0809 Staphylococcus carnosus subsp. carnosus TM300 secretory antigen SsaA YP_002633904.1 806780 D 396513 CDS YP_002633905.1 224476299 7550292 807375..807854 1 NC_012121.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 807854 lspA 7550292 lspA Staphylococcus carnosus subsp. carnosus TM300 lipoprotein signal peptidase YP_002633905.1 807375 D 396513 CDS YP_002633906.1 224476300 7551757 807870..808787 1 NC_012121.1 (Q45480) Hypothetical pseudouridine synthase ylyB (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase RluD; Hypothetical protein; putative ribosomal large subunit pseudouridine synthase D 808787 rluD 7551757 rluD Staphylococcus carnosus subsp. carnosus TM300 putative ribosomal large subunit pseudouridine synthase D YP_002633906.1 807870 D 396513 CDS YP_002633907.1 224476301 7552029 809440..809967 1 NC_012121.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 809967 pyrR 7552029 pyrR Staphylococcus carnosus subsp. carnosus TM300 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_002633907.1 809440 D 396513 CDS YP_002633908.1 224476302 7552000 810191..811477 1 NC_012121.1 (P41006) Uracil permease (Uracil transporter),InterPro: Xanthine/uracil permease family; Hypothetical protein; uracil permease 811477 pyrP 7552000 pyrP Staphylococcus carnosus subsp. carnosus TM300 uracil permease YP_002633908.1 810191 D 396513 CDS YP_002633909.1 224476303 7551999 811519..812427 1 NC_012121.1 (Q8CPJ7) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase),InterPro: Aspartate carbamoyltransferase; Hypothetical protein; putative aspartate transcarbamoylase 812427 pyrB 7551999 pyrB Staphylococcus carnosus subsp. carnosus TM300 putative aspartate transcarbamoylase YP_002633909.1 811519 D 396513 CDS YP_002633910.1 224476304 7551991 812417..813688 1 NC_012121.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 813688 pyrC 7551991 pyrC Staphylococcus carnosus subsp. carnosus TM300 dihydroorotase YP_002633910.1 812417 D 396513 CDS YP_002633911.1 224476305 7551992 813695..814795 1 NC_012121.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 814795 pyrAA 7551992 pyrAA Staphylococcus carnosus subsp. carnosus TM300 carbamoyl phosphate synthase small subunit YP_002633911.1 813695 D 396513 CDS YP_002633912.1 224476306 7551989 814788..817961 1 NC_012121.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 817961 carB 7551989 carB Staphylococcus carnosus subsp. carnosus TM300 carbamoyl phosphate synthase large subunit YP_002633912.1 814788 D 396513 CDS YP_002633913.1 224476307 7551990 818149..818913 1 NC_012121.1 (P46536) Dihydroorotate dehydrogenase electron transfer subunit,InterPro: Oxidoreductase FAD/NAD(P)-binding; Hypothetical protein; putative dihydroorotate dehydrogenase, electron transfer subunit 818913 pyrK 7551990 pyrK Staphylococcus carnosus subsp. carnosus TM300 putative dihydroorotate dehydrogenase, electron transfer subunit YP_002633913.1 818149 D 396513 CDS YP_002633914.1 224476308 7551998 818910..819827 1 NC_012121.1 (Q8RG85) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD),InterPro: Dihydroorotate dehydrogenase 1; Hypothetical protein; dihydroorotate dehydrogenase, catalytic subunit 819827 pyrD 7551998 pyrD Staphylococcus carnosus subsp. carnosus TM300 dihydroorotate dehydrogenase, catalytic subunit YP_002633914.1 818910 D 396513 CDS YP_002633915.1 224476309 7551993 819827..820531 1 NC_012121.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 820531 pyrF 7551993 pyrF Staphylococcus carnosus subsp. carnosus TM300 orotidine 5'-phosphate decarboxylase YP_002633915.1 819827 D 396513 CDS YP_002633916.1 224476310 7551995 820533..821144 1 NC_012121.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 821144 pyrE 7551995 pyrE Staphylococcus carnosus subsp. carnosus TM300 orotate phosphoribosyltransferase YP_002633916.1 820533 D 396513 CDS YP_002633917.1 224476311 7551994 821167..821358 1 NC_012121.1 Hypothetical protein; hypothetical protein 821358 7551994 Sca_0822 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633917.1 821167 D 396513 CDS YP_002633918.1 224476312 7550293 821704..822105 1 NC_012121.1 (Q9P997) V-type ATP synthase alpha chain (EC 3.6.3.14) (V-type ATPase subunit A) [Contains: Tac atpA intein (Tac VMA intein)]; Hypothetical protein; hypothetical protein 822105 7550293 Sca_0823 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633918.1 821704 D 396513 CDS YP_002633919.1 224476313 7550294 822257..823033 1 NC_012121.1 (P96717) Putative protein-tyrosine phosphatase ywqE (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Hypothetical protein; putative tyrosine-protein phosphatase capC 823033 capC 7550294 capC Staphylococcus carnosus subsp. carnosus TM300 putative tyrosine-protein phosphatase capC YP_002633919.1 822257 D 396513 CDS YP_002633920.1 224476314 7551453 complement(823112..824830) 1 NC_012121.1 (Q8CCP0) Serologically defined colon cancer antigen,InterPro: Fibronectin-binding A N-terminal; Hypothetical protein; putative fibronectin/fibrinogen binding protein 824830 7551453 Sca_0825 Staphylococcus carnosus subsp. carnosus TM300 putative fibronectin/fibrinogen binding protein YP_002633920.1 823112 R 396513 CDS YP_002633921.1 224476315 7550295 825005..825628 1 NC_012121.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 825628 gmk 7550295 gmk Staphylococcus carnosus subsp. carnosus TM300 guanylate kinase YP_002633921.1 825005 D 396513 CDS YP_002633922.1 224476316 7551655 825628..825858 1 NC_012121.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 825858 rpoZ 7551655 rpoZ Staphylococcus carnosus subsp. carnosus TM300 DNA-directed RNA polymerase subunit omega YP_002633922.1 825628 D 396513 CDS YP_002633923.1 224476317 7550296 complement(825905..826219) 1 NC_012121.1 (Q38879) Thioredoxin H-type 2 (TRX-H-2),InterPro: Thioredoxin domain 2; Hypothetical protein; putative thioredoxin 826219 7550296 Sca_0828 Staphylococcus carnosus subsp. carnosus TM300 putative thioredoxin YP_002633923.1 825905 R 396513 CDS YP_002633924.1 224476318 7550297 826440..827651 1 NC_012121.1 (P44953) Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phospho,InterPro: DNA/pantothenate metabolism flavoprotein; Hypothetical protein; putative Coenzyme A biosynthesis bifunctional protein coaBC 827651 coaBC 7550297 coaBC Staphylococcus carnosus subsp. carnosus TM300 putative Coenzyme A biosynthesis bifunctional protein coaBC YP_002633924.1 826440 D 396513 CDS YP_002633925.1 224476319 7551478 827652..830060 1 NC_012121.1 (P94461) Primosomal protein N (Replication factor Y),InterPro: Primosomal protein n; Hypothetical protein; putative primosomal replication factor Y 830060 priA 7551478 priA Staphylococcus carnosus subsp. carnosus TM300 putative primosomal replication factor Y YP_002633925.1 827652 D 396513 CDS YP_002633926.1 224476320 7551960 830440..831072 1 NC_012121.1 (P30043) Flavin reductase (EC 1.5.1.30) (FR) (NADPH-dependent diaphorase) (NADPH-flavin reductase) (FLR) (Biliverdin reductase B) (EC 1.3.1.24) (BVR-B) (Biliverdin-IX beta-reductase) (Green heme binding protein) (GHBP); Hypothetical protein; putative NADH-flavin reductase 831072 7551960 Sca_0831 Staphylococcus carnosus subsp. carnosus TM300 putative NADH-flavin reductase YP_002633926.1 830440 D 396513 CDS YP_002633927.1 224476321 7550298 831269..831994 1 NC_012121.1 (Q54518) Protein-tyrosine phosphatase cpsB (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Hypothetical protein; putative phosphotyrosine-protein phosphatase 831994 capC 7550298 capC Staphylococcus carnosus subsp. carnosus TM300 putative phosphotyrosine-protein phosphatase YP_002633927.1 831269 D 396513 CDS YP_002633928.1 224476322 7551454 832110..832427 1 NC_012121.1 Hypothetical protein; hypothetical protein 832427 7551454 Sca_0833 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633928.1 832110 D 396513 CDS YP_002633929.1 224476323 7550299 complement(832528..832824) 1 NC_012121.1 Hypothetical protein; hypothetical protein 832824 7550299 Sca_0834 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633929.1 832528 R 396513 CDS YP_002633930.1 224476324 7550300 833025..833513 1 NC_012121.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 833513 def 7550300 def Staphylococcus carnosus subsp. carnosus TM300 peptide deformylase YP_002633930.1 833025 D 396513 CDS YP_002633931.1 224476325 7551519 833506..834438 1 NC_012121.1 (Q8CSW1) Methionyl-tRNA formyltransferase (EC 2.1.2.9),InterPro: Methionyl-tRNA formyltransferase; Hypothetical protein; putative methionyl-tRNA formyltransferase 834438 7551519 Sca_0836 Staphylococcus carnosus subsp. carnosus TM300 putative methionyl-tRNA formyltransferase YP_002633931.1 833506 D 396513 CDS YP_002633932.1 224476326 7550301 834438..835745 1 NC_012121.1 (P36929) Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase),InterPro: Sun protein; Hypothetical protein; putative NusB_Sun RNA binding protein 835745 7550301 Sca_0837 Staphylococcus carnosus subsp. carnosus TM300 putative NusB_Sun RNA binding protein YP_002633932.1 834438 D 396513 CDS YP_002633933.1 224476327 7550302 835745..836839 1 NC_012121.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 836839 7550302 Sca_0838 Staphylococcus carnosus subsp. carnosus TM300 ribosomal RNA large subunit methyltransferase N YP_002633933.1 835745 D 396513 CDS YP_002633934.1 224476328 7550303 836846..837589 1 NC_012121.1 (P75525) Putative protein phosphatase (EC 3.1.3.16),InterPro: Protein phosphatase 2C-like; Hypothetical protein; putative Serine/threonine phosphatase, family 2C protein 837589 7550303 Sca_0839 Staphylococcus carnosus subsp. carnosus TM300 putative Serine/threonine phosphatase, family 2C protein YP_002633934.1 836846 D 396513 CDS YP_002633935.1 224476329 7550304 837586..839628 1 NC_012121.1 (O34507) Probable serine/threonine-protein kinase yloP (EC 2.7.11.1),InterPro: Protein kinase; Hypothetical protein; putative serine/threonine-protein kinase PknB 839628 pknB 7550304 pknB Staphylococcus carnosus subsp. carnosus TM300 putative serine/threonine-protein kinase PknB YP_002633935.1 837586 D 396513 CDS YP_002633936.1 224476330 7551942 839766..840641 1 NC_012121.1 (Q8CSV8) Probable GTPase engC (EC 3.6.1.-),InterPro: Protein of unknown function DUF258; Hypothetical protein; hypothetical protein 840641 7551942 Sca_0841 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633936.1 839766 D 396513 CDS YP_002633937.1 224476331 7550305 840641..841294 1 NC_012121.1 (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E),InterPro: Ribulose-phosphate 3-epimerase; Hypothetical protein; putative ribulose-5-phosphate 3-epimerase 841294 rpe 7550305 rpe Staphylococcus carnosus subsp. carnosus TM300 putative ribulose-5-phosphate 3-epimerase YP_002633937.1 840641 D 396513 CDS YP_002633938.1 224476332 7552038 841319..841960 1 NC_012121.1 (P41888) Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK) (Thiamine kinase),InterPro: Thiamin pyrophosphokinase catalytic domain; Hypothetical protein; putative thiamine pyrophosphokinase 841960 7552038 Sca_0843 Staphylococcus carnosus subsp. carnosus TM300 putative thiamine pyrophosphokinase YP_002633938.1 841319 D 396513 CDS YP_002633939.1 224476333 7550306 complement(842043..842405) 1 NC_012121.1 (P93703) Cytochrome P450 71C3 (EC 1.14.-.-); Hypothetical protein; hypothetical protein 842405 7550306 Sca_0844 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633939.1 842043 R 396513 CDS YP_002633940.1 224476334 7550307 complement(842588..842776) 1 NC_012121.1 required for 70S ribosome assembly; 50S ribosomal protein L28 842776 rpmB 7550307 rpmB Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L28 YP_002633940.1 842588 R 396513 CDS YP_002633941.1 224476335 7552063 843111..843485 1 NC_012121.1 (O34318) Hypothetical protein yloU,InterPro: Protein of unknown function DUF322; Hypothetical protein; hypothetical protein 843485 7552063 Sca_0846 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633941.1 843111 D 396513 CDS YP_002633942.1 224476336 7550308 843498..845141 1 NC_012121.1 (P75231) Hypothetical protein MG369 homolog (G12_orf558),InterPro: Dak phosphatase domain; Hypothetical protein; dihydroxyacetone kinase family protein 845141 7550308 Sca_0847 Staphylococcus carnosus subsp. carnosus TM300 dihydroxyacetone kinase family protein YP_002633942.1 843498 D 396513 CDS YP_002633943.1 224476337 7550309 845342..846007 1 NC_012121.1 (O34635) Probable L-serine dehydratase beta chain (EC 4.3.1.17) (L-serine deaminase) (SDH) (L-SD),InterPro: Iron-sulfur-dependent L-serine dehydratase beta subunit; Hypothetical protein; putative L-serine dehydratase subunit beta 846007 sdaB 7550309 sdaB Staphylococcus carnosus subsp. carnosus TM300 putative L-serine dehydratase subunit beta YP_002633943.1 845342 D 396513 CDS YP_002633944.1 224476338 7552116 846023..846892 1 NC_012121.1 (P16095) L-serine dehydratase 1 (EC 4.3.1.17) (L-serine deaminase 1) (SDH 1) (L-SD1),InterPro: L-serine dehydratase alpha subunit; Hypothetical protein; putative L-serine dehydratase, iron-sulfur-dependent subunit alpha 846892 sdaA 7552116 sdaA Staphylococcus carnosus subsp. carnosus TM300 putative L-serine dehydratase, iron-sulfur-dependent subunit alpha YP_002633944.1 846023 D 396513 CDS YP_002633945.1 224476339 7552115 846894..848951 1 NC_012121.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 848951 recG 7552115 recG Staphylococcus carnosus subsp. carnosus TM300 ATP-dependent DNA helicase RecG YP_002633945.1 846894 D 396513 CDS YP_002633946.1 224476340 7552013 849095..849658 1 NC_012121.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator 849658 fapR 7552013 fapR Staphylococcus carnosus subsp. carnosus TM300 fatty acid biosynthesis transcriptional regulator YP_002633946.1 849095 D 396513 CDS YP_002633947.1 224476341 7551561 849660..850646 1 NC_012121.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 850646 plsX 7551561 plsX Staphylococcus carnosus subsp. carnosus TM300 putative glycerol-3-phosphate acyltransferase PlsX YP_002633947.1 849660 D 396513 CDS YP_002633948.1 224476342 7551943 850639..851565 1 NC_012121.1 (P71019) Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) (MCT),InterPro: Acyl transferase domain; Hypothetical protein; putative malonyl CoA-acyl carrier protein transacylase 851565 fabD 7551943 fabD Staphylococcus carnosus subsp. carnosus TM300 putative malonyl CoA-acyl carrier protein transacylase YP_002633948.1 850639 D 396513 CDS YP_002633949.1 224476343 7551552 851558..852295 1 NC_012121.1 (Q99QK7) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; 3-oxoacyl-ACP reductase 852295 fabG 7551552 fabG Staphylococcus carnosus subsp. carnosus TM300 3-oxoacyl-ACP reductase YP_002633949.1 851558 D 396513 CDS YP_002633950.1 224476344 7551553 852430..852663 1 NC_012121.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 852663 acpP 7551553 acpP Staphylococcus carnosus subsp. carnosus TM300 acyl carrier protein YP_002633950.1 852430 D 396513 CDS YP_002633951.1 224476345 7551363 852795..853523 1 NC_012121.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 853523 rnc 7551363 rnc Staphylococcus carnosus subsp. carnosus TM300 ribonuclease III YP_002633951.1 852795 D 396513 CDS YP_002633952.1 224476346 7552030 853566..857135 1 NC_012121.1 (P51834) Chromosome partition protein smc,InterPro: Structural maintenance of chromosome protein SMC C-terminal; Hypothetical protein; putative chromosome segregation protein SMC 857135 smc 7552030 smc Staphylococcus carnosus subsp. carnosus TM300 putative chromosome segregation protein SMC YP_002633952.1 853566 D 396513 CDS YP_002633953.1 224476347 7552136 857132..858400 1 NC_012121.1 (P51835) Cell division protein ftsY homolog,InterPro: Cell division transporter substrate-binding protein FtsY; Hypothetical protein; putative cell division protein FtsY 858400 ftsY 7552136 ftsY Staphylococcus carnosus subsp. carnosus TM300 putative cell division protein FtsY YP_002633953.1 857132 D 396513 CDS YP_002633954.1 224476348 7551598 858387..858719 1 NC_012121.1 (Q99UN4) Hypothetical UPF0122 protein SAV1236/SA1079/MW1119,InterPro: Putative helix-turn-helix protein YlxM/p13-like; Hypothetical protein; putative DNA-binding protein 858719 7551598 Sca_0859 Staphylococcus carnosus subsp. carnosus TM300 putative DNA-binding protein YP_002633954.1 858387 D 396513 CDS YP_002633955.1 224476349 7550310 858738..859553 1 NC_012121.1 (P37105) Signal recognition particle protein (Fifty-four homolog),InterPro: GTP-binding signal recognition particle (SRP54) G-domain,Note: Similar to N-terminal part of ffh [Staphylococcus haemolyticus JCSC1435] (BAE04986); Hypothetical protein; hypothetical protein 859553 ffh' 7550310 ffh' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633955.1 858738 D 396513 CDS YP_002633956.1 224476350 7551572 859564..860106 1 NC_012121.1 (P37105) Signal recognition particle protein (Fifty-four homolog),InterPro: Signal peptide binding (SRP54) M-domain,Note: Similar to C-terminal part of ffh [Staphylococcus aureus subsp. aureus N315] (BAB42332); Hypothetical protein; hypothetical protein 860106 ffh'' 7551572 ffh'' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633956.1 859564 D 396513 CDS YP_002633957.1 224476351 7551573 860401..860709 1 NC_012121.1 (P54940) Hypothetical protein yxeA precursor,InterPro: Conserved hypothetical protein 1655; Hypothetical protein; hypothetical protein 860709 7551573 Sca_0862 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633957.1 860401 D 396513 CDS YP_002633958.1 224476352 7550311 860964..861242 1 NC_012121.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 861242 rpsP 7550311 rpsP Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S16 YP_002633958.1 860964 D 396513 CDS YP_002633959.1 224476353 7552090 861375..861851 1 NC_012121.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 861851 rimM 7552090 rimM Staphylococcus carnosus subsp. carnosus TM300 16S rRNA-processing protein RimM YP_002633959.1 861375 D 396513 CDS YP_002633960.1 224476354 7552027 861853..862590 1 NC_012121.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 862590 trmD 7552027 trmD Staphylococcus carnosus subsp. carnosus TM300 tRNA (guanine-N(1)-)-methyltransferase YP_002633960.1 861853 D 396513 CDS YP_002633961.1 224476355 7552198 862694..863044 1 NC_012121.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 863044 rplS 7552198 rplS Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L19 YP_002633961.1 862694 D 396513 CDS YP_002633962.1 224476356 7552056 863511..867665 1 NC_012121.1 (Q8CQD9) Accumulation-associated protein precursor,InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein; putative cell wall-anchored protein 867665 7552056 Sca_0867 Staphylococcus carnosus subsp. carnosus TM300 putative cell wall-anchored protein YP_002633962.1 863511 D 396513 CDS YP_002633963.1 224476357 7550312 complement(867776..869407) 1 NC_012121.1 Hypothetical protein; hypothetical protein 869407 7550312 Sca_0868 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633963.1 867776 R 396513 CDS YP_002633964.1 224476358 7550313 complement(869799..872414) 1 NC_012121.1 Hypothetical protein; hypothetical protein 872414 7550313 Sca_0869 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633964.1 869799 R 396513 CDS YP_002633965.1 224476359 7550314 872671..873528 1 NC_012121.1 (P15028) Iron(III) dicitrate-binding periplasmic protein precursor,InterPro: Periplasmic binding protein; Hypothetical protein; putative ABC transporter siderophore binding protein 873528 7550314 Sca_0870 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter siderophore binding protein YP_002633965.1 872671 D 396513 CDS YP_002633966.1 224476360 7550315 873684..874091 1 NC_012121.1 (Q9PCR2) DNA mismatch repair protein mutS; Hypothetical protein; putative effector domain of transcriptional regulator 874091 7550315 Sca_0871 Staphylococcus carnosus subsp. carnosus TM300 putative effector domain of transcriptional regulator YP_002633966.1 873684 D 396513 CDS YP_002633967.1 224476361 7550316 complement(874143..875033) 1 NC_012121.1 (Q99390) Hypothetical 31.7 kDa protein in traX-finO intergenic region (ORFC),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; putative alpha/beta hydrolase superfamily protein 875033 7550316 Sca_0872 Staphylococcus carnosus subsp. carnosus TM300 putative alpha/beta hydrolase superfamily protein YP_002633967.1 874143 R 396513 CDS YP_002633968.1 224476362 7550317 complement(875087..875839) 1 NC_012121.1 (P52598) Putative HTH-type transcriptional regulator ygbI,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein; putative DeoR family transcriptional regulator 875839 7550317 Sca_0873 Staphylococcus carnosus subsp. carnosus TM300 putative DeoR family transcriptional regulator YP_002633968.1 875087 R 396513 CDS YP_002633969.1 224476363 7550318 876114..876776 1 NC_012121.1 (P71747) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase),InterPro: ABC transporter; Hypothetical protein; putative ABC transporter nucleotide-binding domain 876776 7550318 Sca_0874 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter nucleotide-binding domain YP_002633969.1 876114 D 396513 CDS YP_002633970.1 224476364 7550319 876766..878391 1 NC_012121.1 (Q44123) Ferric transport system permease protein fbpB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative ABC transporter permease 878391 7550319 Sca_0875 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002633970.1 876766 D 396513 CDS YP_002633971.1 224476365 7550320 878388..879203 1 NC_012121.1 (P43951) Protein HI0131 precursor; Hypothetical protein; hypothetical protein 879203 7550320 Sca_0876 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633971.1 878388 D 396513 CDS YP_002633972.1 224476366 7550321 879200..879400 1 NC_012121.1 Weak SD sequence; Hypothetical protein; hypothetical protein 879400 7550321 Sca_0877 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633972.1 879200 D 396513 CDS YP_002633973.1 224476367 7550322 879414..880508 1 NC_012121.1 (P31030) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT); Hypothetical protein; putative aminotransferase, class V 880508 7550322 Sca_0878 Staphylococcus carnosus subsp. carnosus TM300 putative aminotransferase, class V YP_002633973.1 879414 D 396513 CDS YP_002633974.1 224476368 7550323 880513..881298 1 NC_012121.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 881298 7550323 Sca_0879 Staphylococcus carnosus subsp. carnosus TM300 phosphonoacetaldehyde hydrolase YP_002633974.1 880513 D 396513 CDS YP_002633975.1 224476369 7550324 881429..882298 1 NC_012121.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 882298 rbgA 7550324 rbgA Staphylococcus carnosus subsp. carnosus TM300 ribosomal biogenesis GTPase YP_002633975.1 881429 D 396513 CDS YP_002633976.1 224476370 7550325 882298..883083 1 NC_012121.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 883083 rnhB 7550325 rnhB Staphylococcus carnosus subsp. carnosus TM300 ribonuclease HII YP_002633976.1 882298 D 396513 CDS YP_002633977.1 224476371 7552031 883288..884454 1 NC_012121.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 884454 sucC 7552031 sucC Staphylococcus carnosus subsp. carnosus TM300 succinyl-CoA synthetase subunit beta YP_002633977.1 883288 D 396513 CDS YP_002633978.1 224476372 7552153 884475..885389 1 NC_012121.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 885389 sucD 7552153 sucD Staphylococcus carnosus subsp. carnosus TM300 succinyl-CoA synthetase subunit alpha YP_002633978.1 884475 D 396513 CDS YP_002633979.1 224476373 7552154 886070..888139 1 NC_012121.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 888139 topA 7552154 topA Staphylococcus carnosus subsp. carnosus TM300 DNA topoisomerase I YP_002633979.1 886070 D 396513 CDS YP_002633980.1 224476374 7552194 888224..889534 1 NC_012121.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 889534 gid 7552194 gid Staphylococcus carnosus subsp. carnosus TM300 tRNA (uracil-5-)-methyltransferase Gid YP_002633980.1 888224 D 396513 CDS YP_002633981.1 224476375 7551626 889657..890547 1 NC_012121.1 (Q7ZAJ4) Tyrosine recombinase xerC,InterPro: Phage integrase; Hypothetical protein; putative site-specific recombinase XerC 890547 xerC 7551626 xerC Staphylococcus carnosus subsp. carnosus TM300 putative site-specific recombinase XerC YP_002633981.1 889657 D 396513 CDS YP_002633982.1 224476376 7552300 890550..891089 1 NC_012121.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 891089 hslV 7552300 hslV Staphylococcus carnosus subsp. carnosus TM300 ATP-dependent protease peptidase subunit YP_002633982.1 890550 D 396513 CDS YP_002633983.1 224476377 7551706 891174..892580 1 NC_012121.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 892580 hslU 7551706 hslU Staphylococcus carnosus subsp. carnosus TM300 ATP-dependent protease ATP-binding subunit HslU YP_002633983.1 891174 D 396513 CDS YP_002633984.1 224476378 7551705 892613..893386 1 NC_012121.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 893386 codY 7551705 codY Staphylococcus carnosus subsp. carnosus TM300 transcriptional repressor CodY YP_002633984.1 892613 D 396513 CDS YP_002633985.1 224476379 7551481 893570..894352 1 NC_012121.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 894352 rpsB 7551481 rpsB Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S2 YP_002633985.1 893570 D 396513 CDS YP_002633986.1 224476380 7552075 894590..895471 1 NC_012121.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 895471 tsf 7552075 tsf Staphylococcus carnosus subsp. carnosus TM300 elongation factor Ts YP_002633986.1 894590 D 396513 CDS YP_002633987.1 224476381 7552272 895606..896328 1 NC_012121.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 896328 pyrH 7552272 pyrH Staphylococcus carnosus subsp. carnosus TM300 uridylate kinase YP_002633987.1 895606 D 396513 CDS YP_002633988.1 224476382 7551997 896346..896900 1 NC_012121.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 896900 frr 7551997 frr Staphylococcus carnosus subsp. carnosus TM300 ribosome recycling factor YP_002633988.1 896346 D 396513 CDS YP_002633989.1 224476383 7551591 897081..897848 1 NC_012121.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 897848 uppS 7551591 uppS Staphylococcus carnosus subsp. carnosus TM300 UDP pyrophosphate synthase YP_002633989.1 897081 D 396513 CDS YP_002633990.1 224476384 7552282 897866..898648 1 NC_012121.1 (O31752) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase),InterPro: Phosphatidate cytidylyltransferase; Hypothetical protein; putative phosphatidate cytidylyltransferase 898648 cdsA 7552282 cdsA Staphylococcus carnosus subsp. carnosus TM300 putative phosphatidate cytidylyltransferase YP_002633990.1 897866 D 396513 CDS YP_002633991.1 224476385 7551467 898882..900162 1 NC_012121.1 (Q99UL0) Hypothetical zinc metalloprotease SAV1262/SA1105 (EC 3.4.24.-),InterPro: Putative membrane-associated zinc metalloprotease; Hypothetical protein; putative PDZ_metalloprotease family protein 900162 7551467 Sca_0897 Staphylococcus carnosus subsp. carnosus TM300 putative PDZ_metalloprotease family protein YP_002633991.1 898882 D 396513 CDS YP_002633992.1 224476386 7550326 900184..901884 1 NC_012121.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 901884 proS 7550326 proS Staphylococcus carnosus subsp. carnosus TM300 prolyl-tRNA synthetase YP_002633992.1 900184 D 396513 CDS YP_002633993.1 224476387 7551962 902214..906527 1 NC_012121.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 906527 polC 7551962 polC Staphylococcus carnosus subsp. carnosus TM300 DNA polymerase III PolC YP_002633993.1 902214 D 396513 CDS YP_002633994.1 224476388 7551947 906678..907145 1 NC_012121.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 907145 7551947 Sca_0900 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633994.1 906678 D 396513 CDS YP_002633995.1 224476389 7550327 907167..908480 1 NC_012121.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 908480 nusA 7550327 nusA Staphylococcus carnosus subsp. carnosus TM300 transcription elongation factor NusA YP_002633995.1 907167 D 396513 CDS YP_002633996.1 224476390 7551873 908499..908783 1 NC_012121.1 (P32728) Hypothetical protein ylxR (ORF3),InterPro: Protein of unknown function DUF448; Hypothetical protein; hypothetical protein 908783 7551873 Sca_0902 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002633996.1 908499 D 396513 CDS YP_002633997.1 224476391 7550328 908780..909085 1 NC_012121.1 (P32729) Probable ribosomal protein ylxQ,InterPro: Ribosomal protein L7Ae/L30e/S12e/Gadd45; Hypothetical protein; putative ribosomal_L7Ae protein family protein 909085 7550328 Sca_0903 Staphylococcus carnosus subsp. carnosus TM300 putative ribosomal_L7Ae protein family protein YP_002633997.1 908780 D 396513 CDS YP_002633998.1 224476392 7550329 909102..911225 1 NC_012121.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 911225 infB 7550329 infB Staphylococcus carnosus subsp. carnosus TM300 translation initiation factor IF-2 YP_002633998.1 909102 D 396513 CDS YP_002633999.1 224476393 7551721 911431..912195 1 NC_012121.1 (P06886) Toxic shock syndrome toxin-1 precursor (TSST-1),InterPro: Staphylococcal/Streptococcal toxin beta-grasp; Hypothetical protein; exotoxin-like protein 912195 set 7551721 set Staphylococcus carnosus subsp. carnosus TM300 exotoxin-like protein YP_002633999.1 911431 D 396513 CDS YP_002634000.1 224476394 7552127 912329..912706 1 NC_012121.1 (P17412) Fumarate reductase flavoprotein subunit (EC 1.3.99.1),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein; putative member of glyoxalase/bleomycin resistance protein family 912706 7552127 Sca_0906 Staphylococcus carnosus subsp. carnosus TM300 putative member of glyoxalase/bleomycin resistance protein family YP_002634000.1 912329 D 396513 CDS YP_002634001.1 224476395 7550330 912898..913269 1 NC_012121.1 (P10908) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),Similar ro N-terminal part of: glycerophosphoryl diester phosphodiesterase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300260). ,subsp. saprophyticus ATCC 15305]; Hypothetical protein; glycerophosphoryldiester phosphodiesterase (fragment 1) 913269 ugpQ' 7550330 ugpQ' Staphylococcus carnosus subsp. carnosus TM300 glycerophosphoryldiester phosphodiesterase (fragment 1) YP_002634001.1 912898 D 396513 CDS YP_002634002.1 224476396 7552278 913375..913641 1 NC_012121.1 (P10908) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),Similar to C-terminal part of:glycerophosphoryl diester phosphodiesterase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300260); Hypothetical protein; glycerophosphoryldiester phosphodiesterase (fragment 2) 913641 ugpQ'' 7552278 ugpQ'' Staphylococcus carnosus subsp. carnosus TM300 glycerophosphoryldiester phosphodiesterase (fragment 2) YP_002634002.1 913375 D 396513 CDS YP_002634003.1 224476397 7552279 913676..914986 1 NC_012121.1 (P32135) Hypothetical protein yihN; Hypothetical protein; hypothetical protein 914986 7552279 Sca_0909 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634003.1 913676 D 396513 CDS YP_002634004.1 224476398 7550331 915362..915709 1 NC_012121.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 915709 rbfA 7550331 rbfA Staphylococcus carnosus subsp. carnosus TM300 ribosome-binding factor A YP_002634004.1 915362 D 396513 CDS YP_002634005.1 224476399 7552008 915858..916772 1 NC_012121.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 916772 truB 7552008 truB Staphylococcus carnosus subsp. carnosus TM300 tRNA pseudouridine synthase B YP_002634005.1 915858 D 396513 CDS YP_002634006.1 224476400 7552269 916788..917762 1 NC_012121.1 (P54575) Riboflavin biosynthesis protein ribC [Includes: Riboflavin kinase (EC 2.7.1.26) (Flavokinase); FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase)],InterPro: Riboflavin kinase / FAD synthetase; Hypothetical protein; putative riboflavin kinase / FAD synthase RibC 917762 ribC 7552269 ribC Staphylococcus carnosus subsp. carnosus TM300 putative riboflavin kinase / FAD synthase RibC YP_002634006.1 916788 D 396513 CDS YP_002634007.1 224476401 7552023 917887..918156 1 NC_012121.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 918156 rpsO 7552023 rpsO Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S15 YP_002634007.1 917887 D 396513 CDS YP_002634008.1 224476402 7552089 918321..920426 1 NC_012121.1 (P50849) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) (Vegetative protein 15) (VEG15),InterPro: 3 exoribonuclease; Hypothetical protein; polynucleotide phosphorylase/polyadenylase 920426 pnpA 7552089 pnpA Staphylococcus carnosus subsp. carnosus TM300 polynucleotide phosphorylase/polyadenylase YP_002634008.1 918321 D 396513 CDS YP_002634009.1 224476403 7551945 920601..922274 1 NC_012121.1 (Q45493) Hypothetical UPF0036 protein ykqC,InterPro: Conserved hypothetical protein MG423; Hypothetical protein; putative metallo-beta-lactamase superfamily hydrolase 922274 7551945 Sca_0915 Staphylococcus carnosus subsp. carnosus TM300 putative metallo-beta-lactamase superfamily hydrolase YP_002634009.1 920601 D 396513 CDS YP_002634010.1 224476404 7550332 922534..924933 1 NC_012121.1 (Q99UJ6) DNA translocase ftsK,InterPro: Cell divisionFtsK/SpoIIIE protein; Hypothetical protein; putative DNA translocase FtsK (SpoIIIE) 924933 ftsK 7550332 ftsK Staphylococcus carnosus subsp. carnosus TM300 putative DNA translocase FtsK (SpoIIIE) YP_002634010.1 922534 D 396513 CDS YP_002634011.1 224476405 7551597 924936..925658 1 NC_012121.1 (O31761) Hypothetical transcriptional regulator ymfC; Hypothetical protein; GntR family transcriptional regulator 925658 7551597 Sca_0918 Staphylococcus carnosus subsp. carnosus TM300 GntR family transcriptional regulator YP_002634011.1 924936 D 396513 CDS YP_002634012.1 224476406 7550333 925673..926947 1 NC_012121.1 (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-),InterPro: Peptidase M16 inactive; Hypothetical protein; hypothetical protein 926947 7550333 Sca_0919 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634012.1 925673 D 396513 CDS YP_002634013.1 224476407 7550334 926944..928230 1 NC_012121.1 (P71006) Putative zinc-protease albF (EC 3.4.99.-) (Antilisterial bacteriocin subtilosin biosynthesis protein albF),InterPro: Peptidase M16 inactive,pfam00675: Peptidase_M16, Insulinase (only 78% aligned); Hypothetical protein; hypothetical protein 928230 7550334 Sca_0920 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634013.1 926944 D 396513 CDS YP_002634014.1 224476408 7550335 928230..928937 1 NC_012121.1 (Q9X248) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative short-chain dehydrogenase 928937 7550335 Sca_0921 Staphylococcus carnosus subsp. carnosus TM300 putative short-chain dehydrogenase YP_002634014.1 928230 D 396513 CDS YP_002634015.1 224476409 7550336 929066..929905 1 NC_012121.1 (Q9LZ25) Probable disease resistance protein At5g04720; Hypothetical protein; hypothetical protein 929905 7550336 Sca_0922 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634015.1 929066 D 396513 CDS YP_002634016.1 224476410 7550337 929927..930325 1 NC_012121.1 (Q57065) Hypothetical protein HI0367,Predicted TM helix at N-terminus; Hypothetical protein; putative DNA-binding protein 930325 7550337 Sca_0923 Staphylococcus carnosus subsp. carnosus TM300 putative DNA-binding protein YP_002634016.1 929927 D 396513 CDS YP_002634017.1 224476411 7550338 930356..930934 1 NC_012121.1 (Q99UI9) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) (Phosphatidylglycerophosphate synthase) (PGP synthase),InterPro: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Hypothetical protein; putative phosphatidylglycerophosphate synthase 930934 pgsA 7550338 pgsA Staphylococcus carnosus subsp. carnosus TM300 putative phosphatidylglycerophosphate synthase YP_002634017.1 930356 D 396513 CDS YP_002634018.1 224476412 7551935 931085..932227 1 NC_012121.1 (Q97D94) CinA-like protein,InterPro: Competence-damaged protein; Hypothetical protein; hypothetical protein 932227 7551935 Sca_0925 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634018.1 931085 D 396513 CDS YP_002634019.1 224476413 7550339 932399..933466 1 NC_012121.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 933466 recA 7550339 recA Staphylococcus carnosus subsp. carnosus TM300 recombinase A YP_002634019.1 932399 D 396513 CDS YP_002634020.1 224476414 7552011 933741..935300 1 NC_012121.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 935300 7552011 Sca_0927 Staphylococcus carnosus subsp. carnosus TM300 phosphodiesterase YP_002634020.1 933741 D 396513 CDS YP_002634021.1 224476415 7550340 complement(935408..936400) 1 NC_012121.1 (P45290) Hypothetical protein HI1643,InterPro: Conserved hypothetical protein 698; Hypothetical protein; hypothetical protein 936400 7550340 Sca_0928 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634021.1 935408 R 396513 CDS YP_002634022.1 224476416 7550341 936522..937346 1 NC_012121.1 (O33812) Putative HTH-type transcriptional regulator in lacR 5region (Fragment),InterPro: LysR substrate binding domain; Hypothetical protein; LysR family transcriptional regulator 937346 7550341 Sca_0929 Staphylococcus carnosus subsp. carnosus TM300 LysR family transcriptional regulator YP_002634022.1 936522 D 396513 CDS YP_002634023.1 224476417 7550342 complement(937412..937630) 1 NC_012121.1 (Q57789) Hypothetical protein MJ0343; Hypothetical protein; hypothetical protein 937630 7550342 Sca_0930 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634023.1 937412 R 396513 CDS YP_002634024.1 224476418 7550343 937891..938691 1 NC_012121.1 (P47488) Hypothetical protein MG246,InterPro: Conserved hypothetical protein 282,InterPro: Metallo-phosphoesterase; Hypothetical protein; putative metallo-phosphoesterase family protein 938691 7550343 Sca_0931 Staphylococcus carnosus subsp. carnosus TM300 putative metallo-phosphoesterase family protein YP_002634024.1 937891 D 396513 CDS YP_002634025.1 224476419 7550344 938798..940573 1 NC_012121.1 (O27112) 2-oxoglutarate synthase subunit korA (EC 1.2.7.3) (2-ketoglutarate oxidoreductase alpha chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase alpha subunit),InterPro: Pyruvate flavodoxin/ferredoxin oxidoreductase N-terminal; Hypothetical protein; putative pyruvate flavodoxin/ferredoxin oxidoreductase 940573 7550344 Sca_0932 Staphylococcus carnosus subsp. carnosus TM300 putative pyruvate flavodoxin/ferredoxin oxidoreductase YP_002634025.1 938798 D 396513 CDS YP_002634026.1 224476420 7550345 940560..941426 1 NC_012121.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 941426 7550345 Sca_0933 Staphylococcus carnosus subsp. carnosus TM300 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_002634026.1 940560 D 396513 CDS YP_002634027.1 224476421 7550346 941627..942148 1 NC_012121.1 (P56605) Hypothetical protein yoeB; Hypothetical protein; hypothetical protein 942148 7550346 Sca_0934 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634027.1 941627 D 396513 CDS YP_002634028.1 224476422 7550347 942230..942520 1 NC_012121.1 (P72699) Hypothetical UPF0045 protein sll0230; Hypothetical protein; hypothetical protein 942520 7550347 Sca_0935 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634028.1 942230 D 396513 CDS YP_002634029.1 224476423 7550348 942711..944294 1 NC_012121.1 (P42061) Oligopeptide-binding protein appA precursor,InterPro: Bacterial extracellular solute-binding protein family 5; Hypothetical protein; putative oligopeptide-binding protein AppA 944294 appA 7550348 appA Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide-binding protein AppA YP_002634029.1 942711 D 396513 CDS YP_002634030.1 224476424 7551397 944670..945482 1 NC_012121.1 (P42064) Oligopeptide transport ATP-binding protein appD,InterPro: ABC transporter,Truncated at N-terminus by about 17 aa.; Hypothetical protein; oligopeptide transport ATP-binding protein appD 945482 appD' 7551397 appD' Staphylococcus carnosus subsp. carnosus TM300 oligopeptide transport ATP-binding protein appD YP_002634030.1 944670 D 396513 CDS YP_002634031.1 224476425 7551400 945495..946481 1 NC_012121.1 (P42065) Oligopeptide transport ATP-binding protein appF,InterPro: ABC transporter; Hypothetical protein; putative oligopeptide transport system ATP-binding protein AppF 946481 appF 7551400 appF Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transport system ATP-binding protein AppF YP_002634031.1 945495 D 396513 CDS YP_002634032.1 224476426 7551401 946478..947443 1 NC_012121.1 (P37316) Dipeptide transport system permease protein dppB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative oligopeptide transport system permease AppB 947443 appB 7551401 appB Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transport system permease AppB YP_002634032.1 946478 D 396513 CDS YP_002634033.1 224476427 7551398 947456..948355 1 NC_012121.1 (P42063) Oligopeptide transport system permease protein appC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative oligopeptide transport system permease AppC 948355 appC 7551398 appC Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transport system permease AppC YP_002634033.1 947456 D 396513 CDS YP_002634034.1 224476428 7551399 948517..950058 1 NC_012121.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 950058 7551399 Sca_0941 Staphylococcus carnosus subsp. carnosus TM300 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002634034.1 948517 D 396513 CDS YP_002634035.1 224476429 7550349 950058..950414 1 NC_012121.1 (P28706) DNA repair protein rad13; Hypothetical protein; hypothetical protein 950414 7550349 Sca_0942 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634035.1 950058 D 396513 CDS YP_002634036.1 224476430 7550350 950446..950943 1 NC_012121.1 Hypothetical protein; hypothetical protein 950943 7550350 Sca_0943 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634036.1 950446 D 396513 CDS YP_002634037.1 224476431 7550351 complement(950988..951950) 1 NC_012121.1 (P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase; Hypothetical protein; putative glycerophosphoryl diester phosphodiesterase 951950 glpQ 7550351 glpQ Staphylococcus carnosus subsp. carnosus TM300 putative glycerophosphoryl diester phosphodiesterase YP_002634037.1 950988 R 396513 CDS YP_002634038.1 224476432 7551644 952257..954866 1 NC_012121.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 954866 mutS 7551644 mutS Staphylococcus carnosus subsp. carnosus TM300 DNA mismatch repair protein MutS YP_002634038.1 952257 D 396513 CDS YP_002634039.1 224476433 7551829 954880..956820 1 NC_012121.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 956820 mutL 7551829 mutL Staphylococcus carnosus subsp. carnosus TM300 DNA mismatch repair protein YP_002634039.1 954880 D 396513 CDS YP_002634040.1 224476434 7551827 956832..957365 1 NC_012121.1 (P30300) Glycerol uptake operon antiterminator regulatory protein,InterPro: Glycerol-3-phosphate responsive antiterminator; Hypothetical protein; putative glycerol uptake operon antiterminator regulatory protein 957365 glpP 7551827 glpP Staphylococcus carnosus subsp. carnosus TM300 putative glycerol uptake operon antiterminator regulatory protein YP_002634040.1 956832 D 396513 CDS YP_002634041.1 224476435 7551642 957534..958349 1 NC_012121.1 (Q9X1E3) Probable glycerol uptake facilitator protein,InterPro: MIP family; Hypothetical protein; glycerol uptake facilitator 958349 glpF 7551642 glpF Staphylococcus carnosus subsp. carnosus TM300 glycerol uptake facilitator YP_002634041.1 957534 D 396513 CDS YP_002634042.1 224476436 7551640 958523..960028 1 NC_012121.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 960028 glpK 7551640 glpK Staphylococcus carnosus subsp. carnosus TM300 glycerol kinase YP_002634042.1 958523 D 396513 CDS YP_002634043.1 224476437 7551641 960205..961875 1 NC_012121.1 (P18158) Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.99.5),InterPro: FAD dependent oxidoreductase; Hypothetical protein; aerobic glycerol-3-phosphate dehydrogenase 961875 glpD 7551641 glpD Staphylococcus carnosus subsp. carnosus TM300 aerobic glycerol-3-phosphate dehydrogenase YP_002634043.1 960205 D 396513 CDS YP_002634044.1 224476438 7551639 962065..963015 1 NC_012121.1 (Q8R431) Monoglyceride lipase (EC 3.1.1.23),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; putative hydrolase 963015 7551639 Sca_0951 Staphylococcus carnosus subsp. carnosus TM300 putative hydrolase YP_002634044.1 962065 D 396513 CDS YP_002634045.1 224476439 7550352 963002..963952 1 NC_012121.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 963952 miaA 7550352 miaA Staphylococcus carnosus subsp. carnosus TM300 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002634045.1 963002 D 396513 CDS YP_002634046.1 224476440 7551783 963954..964169 1 NC_012121.1 (O31796) Hfq protein,InterPro: Host factor Hfq; Hypothetical protein; putative Hfq protein 964169 7551783 Sca_0953 Staphylococcus carnosus subsp. carnosus TM300 putative Hfq protein YP_002634046.1 963954 D 396513 CDS YP_002634047.1 224476441 7550353 complement(964451..964924) 1 NC_012121.1 (O48646) Probable phospholipid hydroperoxide glutathione peroxidase mitochondrial precursor (EC 1.11.1.12) (PHGPx) (AtGPX1),InterPro: Glutathione peroxidase; Hypothetical protein; putative glutathione peroxidase 964924 7550353 Sca_0954 Staphylococcus carnosus subsp. carnosus TM300 putative glutathione peroxidase YP_002634047.1 964451 R 396513 CDS YP_002634048.1 224476442 7550354 965072..966334 1 NC_012121.1 (P25519) GTP-binding protein hflX,InterPro: Restriction endonuclease; Hypothetical protein; GTP-binding protein HflX 966334 7550354 Sca_0955 Staphylococcus carnosus subsp. carnosus TM300 GTP-binding protein HflX YP_002634048.1 965072 D 396513 CDS YP_002634049.1 224476443 7550355 966335..967573 1 NC_012121.1 (P45624) Hypothetical 33.9 kDa protein in glnA 5region (ORF306); Hypothetical protein; putative aluminium resistance protein family protein 967573 7550355 Sca_0956 Staphylococcus carnosus subsp. carnosus TM300 putative aluminium resistance protein family protein YP_002634049.1 966335 D 396513 CDS YP_002634050.1 224476444 7550356 complement(967673..969013) 1 NC_012121.1 (Q59812) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS),InterPro: Glutamine synthetase type I; Hypothetical protein; glutamine synthetase 969013 glnA 7550356 glnA Staphylococcus carnosus subsp. carnosus TM300 glutamine synthetase YP_002634050.1 967673 R 396513 CDS YP_002634051.1 224476445 7551636 complement(969032..969397) 1 NC_012121.1 (P37582) HTH-type transcriptional regulator glnR,InterPro: Bacterial regulatory protein MerR family; Hypothetical protein; putative MerR family transcriptional regulator 969397 7551636 Sca_0958 Staphylococcus carnosus subsp. carnosus TM300 putative MerR family transcriptional regulator YP_002634051.1 969032 R 396513 CDS YP_002634052.1 224476446 7550357 complement(969624..969983) 1 NC_012121.1 Hypothetical protein; hypothetical protein 969983 7550357 Sca_0959 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634052.1 969624 R 396513 CDS YP_002634053.1 224476447 7550358 970268..970897 1 NC_012121.1 (Q8CPD8) Cardiolipin synthetase 1 (EC 2.7.8.-) (Cardiolipin synthase 1) (CL synthase 1),Similar to N-terminus of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE04899); Hypothetical protein; hypothetical protein 970897 7550358 Sca_0960 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634053.1 970268 D 396513 CDS YP_002634054.1 224476448 7550359 971022..971837 1 NC_012121.1 (Q99SG9) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase) (CL synthase),InterPro: Phospholipase D/Transphosphatidylase,Similar to C-terminus of putative cardiolipin synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300885); Hypothetical protein; hypothetical protein 971837 7550359 Sca_0961 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634054.1 971022 D 396513 CDS YP_002634055.1 224476449 7550360 complement(971884..972114) 1 NC_012121.1 Hypothetical protein; hypothetical protein 972114 7550360 Sca_0962 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634055.1 971884 R 396513 CDS YP_002634056.1 224476450 7550361 972249..972791 1 NC_012121.1 (P43269) Thermonuclease precursor (EC 3.1.31.1) (TNase) (Micrococcal nuclease) (Staphylococcal nuclease),InterPro: Staphylococcus nuclease (SNase-like); Hypothetical protein; thermonuclease NucH/NucI 972791 nuc 7550361 nuc Staphylococcus carnosus subsp. carnosus TM300 thermonuclease NucH/NucI YP_002634056.1 972249 D 396513 CDS YP_002634057.1 224476451 7551870 972920..973801 1 NC_012121.1 (P15028) Iron(III) dicitrate-binding periplasmic protein precursor,InterPro: Periplasmic binding protein,No signal peptide / lipoprotein-specif cleavage site!; Hypothetical protein; transport system binding protein 973801 7551870 Sca_0964 Staphylococcus carnosus subsp. carnosus TM300 transport system binding protein YP_002634057.1 972920 D 396513 CDS YP_002634058.1 224476452 7550362 complement(973872..974729) 1 NC_012121.1 hypothetical protein 974729 7550362 Sca_0965 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634058.1 973872 R 396513 CDS YP_002634059.1 224476453 7550363 complement(974972..975343) 1 NC_012121.1 Weak similarity to staphylococcal accessory regulator R; Hypothetical protein; hypothetical protein 975343 7550363 Sca_0966 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634059.1 974972 R 396513 CDS YP_002634060.1 224476454 7550364 975537..976007 1 NC_012121.1 Hypothetical protein; hypothetical protein 976007 7550364 Sca_0967 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634060.1 975537 D 396513 CDS YP_002634061.1 224476455 7550365 976105..976692 1 NC_012121.1 Hypothetical protein; hypothetical protein 976692 7550365 Sca_0968 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634061.1 976105 D 396513 CDS YP_002634062.1 224476456 7550366 complement(976783..978162) 1 NC_012121.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 978162 7550366 Sca_0969 Staphylococcus carnosus subsp. carnosus TM300 aspartate kinase YP_002634062.1 976783 R 396513 CDS YP_002634063.1 224476457 7550367 978354..979634 1 NC_012121.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 979634 hom 7550367 hom Staphylococcus carnosus subsp. carnosus TM300 homoserine dehydrogenase YP_002634063.1 978354 D 396513 CDS YP_002634064.1 224476458 7551701 979640..980707 1 NC_012121.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 980707 thrC 7551701 thrC Staphylococcus carnosus subsp. carnosus TM300 threonine synthase YP_002634064.1 979640 D 396513 CDS YP_002634065.1 224476459 7552185 980707..981621 1 NC_012121.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 981621 thrB 7552185 thrB Staphylococcus carnosus subsp. carnosus TM300 homoserine kinase YP_002634065.1 980707 D 396513 CDS YP_002634066.1 224476460 7552184 981677..982483 1 NC_012121.1 (P54947) Hypothetical protein yxeH,InterPro: Cof protein; Hypothetical protein; putative HAD superfamily hydrolase 982483 7552184 Sca_0973 Staphylococcus carnosus subsp. carnosus TM300 putative HAD superfamily hydrolase YP_002634066.1 981677 D 396513 CDS YP_002634067.1 224476461 7550368 complement(982534..982848) 1 NC_012121.1 Hypothetical protein; hypothetical protein 982848 7550368 Sca_0974 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634067.1 982534 R 396513 CDS YP_002634068.1 224476462 7550369 complement(982966..984429) 1 NC_012121.1 (P25737) Lysine-specific permease,InterPro: Amino acid permease-associated region; Hypothetical protein; putative amino acid permease 984429 7550369 Sca_0975 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid permease YP_002634068.1 982966 R 396513 CDS YP_002634069.1 224476463 7550370 complement(984742..984891) 1 NC_012121.1 50S ribosomal protein L33 984891 rpmG 7550370 rpmG Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L33 YP_002634069.1 984742 R 396513 CDS YP_002634070.1 224476464 7552068 985150..985419 1 NC_012121.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 985419 rpsN 7552068 rpsN Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S14 YP_002634070.1 985150 D 396513 CDS YP_002634071.1 224476465 7552087 985606..986583 1 NC_012121.1 (Q8CPC9) GMP reductase (EC 1.7.1.7) (Guanosine 5-monophosphate oxidoreductase) (Guanosine monophosphate reductase),InterPro: IMP dehydrogenase/GMP reductase; Hypothetical protein; guanosine 5'-monophosphate oxidoreductase 986583 guaC 7552087 guaC Staphylococcus carnosus subsp. carnosus TM300 guanosine 5'-monophosphate oxidoreductase YP_002634071.1 985606 D 396513 CDS YP_002634072.1 224476466 7551672 986606..987625 1 NC_012121.1 Hypothetical protein; hypothetical protein 987625 7551672 Sca_0979 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634072.1 986606 D 396513 CDS YP_002634073.1 224476467 7550371 complement(987719..988342) 1 NC_012121.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 988342 lexA 7550371 lexA Staphylococcus carnosus subsp. carnosus TM300 LexA repressor YP_002634073.1 987719 R 396513 CDS YP_002634074.1 224476468 7551748 988486..988719 1 NC_012121.1 (P24180) Acriflavine resistance protein E precursor (Protein envC); Hypothetical protein; hypothetical protein 988719 7551748 Sca_0981 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634074.1 988486 D 396513 CDS YP_002634075.1 224476469 7550372 988853..989095 1 NC_012121.1 (Q8CSP4) Hypothetical UPF0291 protein SE1024; Hypothetical protein; hypothetical protein 989095 7550372 Sca_0982 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634075.1 988853 D 396513 CDS YP_002634076.1 224476470 7550373 989297..991285 1 NC_012121.1 (Q8CPC7) Transketolase (EC 2.2.1.1) (TK),InterPro: Bacterial transketolase; Hypothetical protein; putative transketolase 991285 tkt 7550373 tkt Staphylococcus carnosus subsp. carnosus TM300 putative transketolase YP_002634076.1 989297 D 396513 CDS YP_002634077.1 224476471 7552190 991474..991704 1 NC_012121.1 (Q8E3V6) Hypothetical UPF0154 protein gbs1650,InterPro: Protein of unknown function UPF0154; Hypothetical protein; hypothetical protein 991704 7552190 Sca_0984 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634077.1 991474 D 396513 CDS YP_002634078.1 224476472 7550374 991994..992461 1 NC_012121.1 (P45710) CcdC protein; Hypothetical protein; hypothetical protein 992461 7550374 Sca_0985 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634078.1 991994 D 396513 CDS YP_002634079.1 224476473 7550375 992564..992650 1 NC_012121.1 Hypothetical protein; hypothetical protein 992650 7550375 Sca_0986 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634079.1 992564 D 396513 CDS YP_002634080.1 224476474 7550376 992744..993871 1 NC_012121.1 (P13457) Nuclease sbcCD subunit D,InterPro: Exonuclease SbcD; Hypothetical protein; putative exonuclease 993871 7550376 Sca_0987 Staphylococcus carnosus subsp. carnosus TM300 putative exonuclease YP_002634080.1 992744 D 396513 CDS YP_002634081.1 224476475 7550377 993868..996903 1 NC_012121.1 (O83635) Nuclease sbcCD subunit C,InterPro: ABC transporter; Hypothetical protein; putative DNA repair ATPase 996903 7550377 Sca_0988 Staphylococcus carnosus subsp. carnosus TM300 putative DNA repair ATPase YP_002634081.1 993868 D 396513 CDS YP_002634082.1 224476476 7550378 complement(996955..997377) 1 NC_012121.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 997377 mscL 7550378 mscL Staphylococcus carnosus subsp. carnosus TM300 large-conductance mechanosensitive channel YP_002634082.1 996955 R 396513 CDS YP_002634083.1 224476477 7551812 997766..999400 1 NC_012121.1 (P54417) Glycine betaine transporter opuD,InterPro: BCCT transporter; Hypothetical protein; glycine betaine transporter opuD 999400 opuD 7551812 opuD Staphylococcus carnosus subsp. carnosus TM300 glycine betaine transporter opuD YP_002634083.1 997766 D 396513 CDS YP_002634084.1 224476478 7551894 999660..1002365 1 NC_012121.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1002365 citB 7551894 citB Staphylococcus carnosus subsp. carnosus TM300 aconitate hydratase YP_002634084.1 999660 D 396513 CDS YP_002634085.1 224476479 7551468 1002485..1002946 1 NC_012121.1 (P44679) Hypothetical protein HI0386,InterPro: 4-hydroxybenzoyl-CoA thioesterase; Hypothetical protein; putative thioesterase superfamily protein 1002946 7551468 Sca_0992 Staphylococcus carnosus subsp. carnosus TM300 putative thioesterase superfamily protein YP_002634085.1 1002485 D 396513 CDS YP_002634086.1 224476480 7550379 complement(1003001..1003318) 1 NC_012121.1 InterPro: Uncharacterised conserved protein UCP034852; Hypothetical protein; hypothetical protein 1003318 7550379 Sca_0993 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634086.1 1003001 R 396513 CDS YP_002634087.1 224476481 7550380 complement(1003525..1004133) 1 NC_012121.1 (P59253) Hypothetical UPF0078 protein SE1035,InterPro: Protein of unknown function DUF205; Hypothetical protein; hypothetical protein 1004133 7550380 Sca_0994 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634087.1 1003525 R 396513 CDS YP_002634088.1 224476482 7550381 1004424..1006424 1 NC_012121.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1006424 parE 7550381 parE Staphylococcus carnosus subsp. carnosus TM300 DNA topoisomerase IV subunit B YP_002634088.1 1004424 D 396513 CDS YP_002634089.1 224476483 7551904 1006421..1008847 1 NC_012121.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1008847 parC 7551904 parC Staphylococcus carnosus subsp. carnosus TM300 DNA topoisomerase IV subunit A YP_002634089.1 1006421 D 396513 CDS YP_002634090.1 224476484 7551903 1009139..1010602 1 NC_012121.1 (Q45068) Amino acid carrier protein alsT,InterPro: Sodium:alanine symporter; Hypothetical protein; putative amino acid carrier protein 1010602 7551903 Sca_0997 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid carrier protein YP_002634090.1 1009139 D 396513 CDS YP_002634091.1 224476485 7550382 1010782..1011645 1 NC_012121.1 (P11989) Cryptic beta-glucoside bgl operon antiterminator,InterPro: Transcriptional antiterminator bglG,>gi|2632149|emb|CAA74358.1| antiterminator [Staphylococcus carnosus], Length = 287,Score = 569 bits (1467), Expect = e-161,Identities = 287/287 (100%), Positives = 287/287 (100%); Hypothetical protein; transcription antiterminator GlcT 1011645 glcT 7550382 glcT Staphylococcus carnosus subsp. carnosus TM300 transcription antiterminator GlcT YP_002634091.1 1010782 D 396513 CDS YP_002634092.1 224476486 7551632 1011768..1013795 1 NC_012121.1 gi|628925|pir||S46952 phosphotransferase system enzyme II (EC 2.7.1.69), glucose-specific, factor IIA -Staphylococcus carnosus; Hypothetical protein; glucose-specific phosphotransferase system enzyme II, factor IIA 1013795 glcA 7551632 glcA Staphylococcus carnosus subsp. carnosus TM300 glucose-specific phosphotransferase system enzyme II, factor IIA YP_002634092.1 1011768 D 396513 CDS YP_002634093.1 224476487 7551629 1013926..1016004 1 NC_012121.1 gi|2144427|pir||S46953 phosphotransferase system enzyme II (EC 2.7.1.69), glucose-specific, factor IIB -Staphylococcus carnosus,(P20166) PTS system glucose-specific IIABC component (EIIABC-Glc) (Glucose-permease IIABC component) (Phosphotransferase enzyme II ABC component) (EC 2.7.1.69) (EII-Glc/EIII-Glc),InterPro: Phosphotransferase system EIIC; Hypothetical protein; glucose-specific phosphotransferase system enzym II, factor IIB 1016004 glcB 7551629 glcB Staphylococcus carnosus subsp. carnosus TM300 glucose-specific phosphotransferase system enzym II, factor IIB YP_002634093.1 1013926 D 396513 CDS YP_002634094.1 224476488 7551631 1016219..1017445 1 NC_012121.1 (O32095) Hypothetical UPF0118 protein yueF,InterPro: Protein of unknown function UPF0118; Hypothetical protein; putative permease 1017445 7551631 Sca_1001 Staphylococcus carnosus subsp. carnosus TM300 putative permease YP_002634094.1 1016219 D 396513 CDS YP_002634095.1 224476489 7550383 1017619..1020144 1 NC_012121.1 InterPro: Protein of unknown function DUF470; Hypothetical protein; oxacillin resistance-related FmtC protein 1020144 fmtC 7550383 fmtC Staphylococcus carnosus subsp. carnosus TM300 oxacillin resistance-related FmtC protein YP_002634095.1 1017619 D 396513 CDS YP_002634096.1 224476490 7551583 1020488..1021768 1 NC_012121.1 (O13326) O-acetylhomoserine (Thiol)-lyase (EC 2.5.1.49) (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase),InterPro: O-acetylhomoserine/O-acetylserine sulfhydrylase; Hypothetical protein; putative O-acetylhomoserine 1021768 cysD 7551583 cysD Staphylococcus carnosus subsp. carnosus TM300 putative O-acetylhomoserine YP_002634096.1 1020488 D 396513 CDS YP_002634097.1 224476491 7551500 1021770..1022663 1 NC_012121.1 (Q9CEC5) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-transsuccinylase) (HTS),InterPro: Homoserine O-succinyltransferase; Hypothetical protein; putative homoserine O-succinyltransferase 1022663 metA 7551500 metA Staphylococcus carnosus subsp. carnosus TM300 putative homoserine O-succinyltransferase YP_002634097.1 1021770 D 396513 CDS YP_002634098.1 224476492 7551774 complement(1022740..1023255) 1 NC_012121.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1023255 msrA 7551774 msrA Staphylococcus carnosus subsp. carnosus TM300 methionine sulfoxide reductase A YP_002634098.1 1022740 R 396513 CDS YP_002634099.1 224476493 7551813 1023397..1024413 1 NC_012121.1 (Q9K6Q8) Membrane-bound protein lytR,InterPro: Cell envelope-related transcriptional attenuator; Hypothetical protein; putative cell envelope-related transcriptional attenuator 1024413 7551813 Sca_1006 Staphylococcus carnosus subsp. carnosus TM300 putative cell envelope-related transcriptional attenuator YP_002634099.1 1023397 D 396513 CDS YP_002634100.1 224476494 7550384 complement(1024473..1024658) 1 NC_012121.1 (Q927S9) Probable tautomerase lin2709 (EC 5.3.2.-),InterPro: 4-oxalocrotonate tautomerase; Hypothetical protein; putative keto-enol isomerase 1024658 7550384 Sca_1007 Staphylococcus carnosus subsp. carnosus TM300 putative keto-enol isomerase YP_002634100.1 1024473 R 396513 CDS YP_002634101.1 224476495 7550385 1024819..1025742 1 NC_012121.1 (Q81M86) DNA polymerase IV (EC 2.7.7.7) (Pol IV),InterPro: UMUC-like DNA-repair protein,Similar to N-terminus of ImpB/MucB/SamB family protein [Staphylococcus aureus subsp. aureus MRSA252] (YP_040782); Hypothetical protein; ImpB/MucB/SamB family protein (fragment 1) 1025742 7550385 Sca_1008 Staphylococcus carnosus subsp. carnosus TM300 ImpB/MucB/SamB family protein (fragment 1) YP_002634101.1 1024819 D 396513 CDS YP_002634102.1 224476496 7550386 1025708..1026082 1 NC_012121.1 (Q9K9A8) DNA polymerase IV 2 (EC 2.7.7.7) (Pol IV 2),Similar to C-terminal part of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE04854); Hypothetical protein; ImpB/MucB/SamB family protein (fragment 2) 1026082 7550386 Sca_1009 Staphylococcus carnosus subsp. carnosus TM300 ImpB/MucB/SamB family protein (fragment 2) YP_002634102.1 1025708 D 396513 CDS YP_002634103.1 224476497 7550387 complement(1026134..1027228) 1 NC_012121.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 1027228 tyrA 7550387 tyrA Staphylococcus carnosus subsp. carnosus TM300 prephenate dehydrogenase YP_002634103.1 1026134 R 396513 CDS YP_002634104.1 224476498 7552275 1027364..1028404 1 NC_012121.1 (P77585) Hypothetical protein ypdE,InterPro: Peptidase M42; Hypothetical protein; putative peptidase 1028404 7552275 Sca_1011 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase YP_002634104.1 1027364 D 396513 CDS YP_002634105.1 224476499 7550388 1028957..1030366 1 NC_012121.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 1030366 trpE 7550388 trpE Staphylococcus carnosus subsp. carnosus TM300 anthranilate synthase component I YP_002634105.1 1028957 D 396513 CDS YP_002634106.1 224476500 7552264 1030363..1030986 1 NC_012121.1 (P06193) Para-aminobenzoate synthase glutamine amidotransferase component II (EC 6.3.5.8) (ADC synthase),InterPro: Glutamine amidotransferase of anthranilate synthase; Hypothetical protein; putative anthranilate synthase component II 1030986 trpG 7552264 trpG Staphylococcus carnosus subsp. carnosus TM300 putative anthranilate synthase component II YP_002634106.1 1030363 D 396513 CDS YP_002634107.1 224476501 7552266 1030931..1031947 1 NC_012121.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1031947 trpD 7552266 trpD Staphylococcus carnosus subsp. carnosus TM300 anthranilate phosphoribosyltransferase YP_002634107.1 1030931 D 396513 CDS YP_002634108.1 224476502 7552263 1031940..1032707 1 NC_012121.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 1032707 trpC 7552263 trpC Staphylococcus carnosus subsp. carnosus TM300 indole-3-glycerol-phosphate synthase YP_002634108.1 1031940 D 396513 CDS YP_002634109.1 224476503 7552262 1032712..1033341 1 NC_012121.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 1033341 trpF 7552262 trpF Staphylococcus carnosus subsp. carnosus TM300 N-(5'-phosphoribosyl)anthranilate isomerase YP_002634109.1 1032712 D 396513 CDS YP_002634110.1 224476504 7552265 1033338..1034567 1 NC_012121.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1034567 trpB 7552265 trpB Staphylococcus carnosus subsp. carnosus TM300 tryptophan synthase subunit beta YP_002634110.1 1033338 D 396513 CDS YP_002634111.1 224476505 7552261 1034560..1035312 1 NC_012121.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1035312 trpA 7552261 trpA Staphylococcus carnosus subsp. carnosus TM300 tryptophan synthase subunit alpha YP_002634111.1 1034560 D 396513 CDS YP_002634112.1 224476506 7552260 1035617..1036873 1 NC_012121.1 (P14304) Factor essential for expression of methicillin resistance,InterPro: Methicillin resistance protein; Hypothetical protein; factor essential for expression of methicillin resistance FemA 1036873 femA 7552260 femA Staphylococcus carnosus subsp. carnosus TM300 factor essential for expression of methicillin resistance FemA YP_002634112.1 1035617 D 396513 CDS YP_002634113.1 224476507 7551569 1036900..1038159 1 NC_012121.1 (Q8CPA8) Protein femB,InterPro: Methicillin resistance protein; Hypothetical protein; factor essential for expression of methicillin resistance FemB 1038159 femB 7551569 femB Staphylococcus carnosus subsp. carnosus TM300 factor essential for expression of methicillin resistance FemB YP_002634113.1 1036900 D 396513 CDS YP_002634114.1 224476508 7551570 complement(1038317..1038838) 1 NC_012121.1 (P23900) Glycerol uptake/efflux facilitator protein; Hypothetical protein; hypothetical protein 1038838 7551570 Sca_1021 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634114.1 1038317 R 396513 CDS YP_002634115.1 224476509 7550389 complement(1040240..1040932) 1 NC_012121.1 (P45051) Oligopeptide transport ATP-binding protein oppF,InterPro: ABC transporter; Hypothetical protein; putative oligopeptide transporter ATPase Opp-2F 1040932 opp-2F 7550389 opp-2F Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transporter ATPase Opp-2F YP_002634115.1 1040240 R 396513 CDS YP_002634116.1 224476510 7551882 complement(1040925..1041710) 1 NC_012121.1 (P33593) Nickel transport ATP-binding protein nikD,InterPro: ABC transporter; Hypothetical protein; putative oligopeptide transporter ATPase Opp-2D 1041710 opp-2D 7551882 opp-2D Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transporter ATPase Opp-2D YP_002634116.1 1040925 R 396513 CDS YP_002634117.1 224476511 7551881 complement(1041703..1042518) 1 NC_012121.1 (P94312) Dipeptide transport system permease protein dppC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative oligopeptide transporter membrane permease Opp-2c 1042518 opp-2C 7551881 opp-2C Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transporter membrane permease Opp-2c YP_002634117.1 1041703 R 396513 CDS YP_002634118.1 224476512 7551880 complement(1042515..1043468) 1 NC_012121.1 (P75798) Hypothetical ABC transporter permease protein yliC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative oligopeptide transporter membrane permease Opp-2B 1043468 opp-2B 7551880 opp-2B Staphylococcus carnosus subsp. carnosus TM300 putative oligopeptide transporter membrane permease Opp-2B YP_002634118.1 1042515 R 396513 CDS YP_002634119.1 224476513 7551879 complement(1043501..1043812) 1 NC_012121.1 (P26906) Dipeptide-binding protein dppE precursor,Similar to C-terminal part (aa 396 - 491) of putative extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] (CAG41981): length 491 aa; Hypothetical protein; hypothetical protein 1043812 7551879 Sca_1026 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634119.1 1043501 R 396513 CDS YP_002634120.1 224476514 7550390 complement(1043760..1044983) 1 NC_012121.1 (P75797) Putative binding protein yliB precursor,InterPro: Bacterial extracellular solute-binding protein family 5,Similar to N-terminus (aa 1 - 395) of putative extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] (CAG41981): length 491 aa; Hypothetical protein; hypothetical protein 1044983 7550390 Sca_1027 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634120.1 1043760 R 396513 CDS YP_002634121.1 224476515 7550391 complement(1045146..1045490) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1045490 7550391 Sca_1028 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634121.1 1045146 R 396513 CDS YP_002634122.1 224476516 7550392 1045658..1047472 1 NC_012121.1 (Q9CEV7) Oligoendopeptidase F homolog (EC 3.4.24.-),InterPro: Peptidase M3; Hypothetical protein; putative peptidase family M3 protein 1047472 7550392 Sca_1029 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase family M3 protein YP_002634122.1 1045658 D 396513 CDS YP_002634123.1 224476517 7550393 complement(1047530..1048177) 1 NC_012121.1 (O32488) Phosphate transport system protein phoU,InterPro: PhoU; Hypothetical protein; putative phosphate uptake regulator protein 1048177 7550393 Sca_1030 Staphylococcus carnosus subsp. carnosus TM300 putative phosphate uptake regulator protein YP_002634123.1 1047530 R 396513 CDS YP_002634124.1 224476518 7550394 complement(1048177..1049040) 1 NC_012121.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1049040 pstB 7550394 pstB Staphylococcus carnosus subsp. carnosus TM300 phosphate transporter ATP-binding protein YP_002634124.1 1048177 R 396513 CDS YP_002634125.1 224476519 7551966 complement(1049091..1050020) 1 NC_012121.1 (P46340) Probable ABC transporter permease protein yqgI,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative phosphate ABC transporter permease 1050020 pstA 7551966 pstA Staphylococcus carnosus subsp. carnosus TM300 putative phosphate ABC transporter permease YP_002634125.1 1049091 R 396513 CDS YP_002634126.1 224476520 7551965 complement(1050022..1050948) 1 NC_012121.1 (Q9CNJ6) Phosphate transport system permease protein pstA,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative ABC transporter permease 1050948 7551965 Sca_1033 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002634126.1 1050022 R 396513 CDS YP_002634127.1 224476521 7550395 complement(1051081..1052016) 1 NC_012121.1 (Q55200) Protein sphX precursor,InterPro: Bacterial extracellular solute-binding protein family 1; Hypothetical protein; putative phosphate transport system substrate-binding protein 1052016 7550395 Sca_1034 Staphylococcus carnosus subsp. carnosus TM300 putative phosphate transport system substrate-binding protein YP_002634127.1 1051081 R 396513 CDS YP_002634128.1 224476522 7550396 complement(1052437..1053345) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1053345 7550396 Sca_1035 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634128.1 1052437 R 396513 CDS YP_002634129.1 224476523 7550397 1053548..1055149 1 NC_012121.1 (P75790) Hypothetical ABC transporter ATP-binding protein ybiT,InterPro: ABC transporter,Interpro: Hypothetical ABC transporter ATP-binding protein; Hypothetical protein; putative ABC transporter ATP-binding protein 1055149 7550397 Sca_1036 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002634129.1 1053548 D 396513 CDS YP_002634130.1 224476524 7550398 1055671..1056873 1 NC_012121.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1056873 lysC 7550398 lysC Staphylococcus carnosus subsp. carnosus TM300 aspartate kinase YP_002634130.1 1055671 D 396513 CDS YP_002634131.1 224476525 7551761 1056958..1057947 1 NC_012121.1 (O67716) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH),InterPro: Aspartate-semialdehyde dehydrogenase USG-1 related; Hypothetical protein; putative aspartate semialdehyde dehydrogenase 1057947 asd 7551761 asd Staphylococcus carnosus subsp. carnosus TM300 putative aspartate semialdehyde dehydrogenase YP_002634131.1 1056958 D 396513 CDS YP_002634132.1 224476526 7551426 1057950..1058834 1 NC_012121.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1058834 dapA 7551426 dapA Staphylococcus carnosus subsp. carnosus TM300 dihydrodipicolinate synthase YP_002634132.1 1057950 D 396513 CDS YP_002634133.1 224476527 7551511 1058834..1059562 1 NC_012121.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1059562 dapB 7551511 dapB Staphylococcus carnosus subsp. carnosus TM300 dihydrodipicolinate reductase YP_002634133.1 1058834 D 396513 CDS YP_002634134.1 224476528 7551512 1059585..1060304 1 NC_012121.1 (Q9ZDX0) 2345-tetrahydropyridine-26-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase),InterPro: Bacterial transferase hexapeptide repeat; Hypothetical protein; tetrahydrodipicolinate acetyltransferase 1060304 dapD 7551512 dapD Staphylococcus carnosus subsp. carnosus TM300 tetrahydrodipicolinate acetyltransferase YP_002634134.1 1059585 D 396513 CDS YP_002634135.1 224476529 7551513 1060421..1061578 1 NC_012121.1 (P54970) IAA-amino acid hydrolase homolog 2 precursor,InterPro: Peptidase M20/M25/M40; Hypothetical protein; putative peptidase (peptidase family M20/M25/M40) 1061578 7551513 Sca_1042 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase (peptidase family M20/M25/M40) YP_002634135.1 1060421 D 396513 CDS YP_002634136.1 224476530 7550399 1061581..1062657 1 NC_012121.1 (Q99U86) Alanine racemase 2 (EC 5.1.1.1),InterPro: Protein of unknown function UPF0001; Hypothetical protein; putative alanine racemase 1062657 alr 7550399 alr Staphylococcus carnosus subsp. carnosus TM300 putative alanine racemase YP_002634136.1 1061581 D 396513 CDS YP_002634137.1 224476531 7551390 1062659..1063921 1 NC_012121.1 (P23630) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP decarboxylase),InterPro: Diaminopimelate decarboxylase; Hypothetical protein; putative diaminopimelate decarboxylase 1063921 lysA 7551390 lysA Staphylococcus carnosus subsp. carnosus TM300 putative diaminopimelate decarboxylase YP_002634137.1 1062659 D 396513 CDS YP_002634138.1 224476532 7551760 complement(1064074..1064274) 1 NC_012121.1 (P62169) Cold shock-like protein cspC,InterPro: Cold-shock DNA-binding domain; Hypothetical protein; putative cold shock protein 1064274 csp 7551760 csp Staphylococcus carnosus subsp. carnosus TM300 putative cold shock protein YP_002634138.1 1064074 R 396513 CDS YP_002634139.1 224476533 7551487 complement(1064625..1064933) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1064933 7551487 Sca_1046 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634139.1 1064625 R 396513 CDS YP_002634140.1 224476534 7550400 1065093..1065362 1 NC_012121.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1065362 7550400 Sca_1047 Staphylococcus carnosus subsp. carnosus TM300 acylphosphatase YP_002634140.1 1065093 D 396513 CDS YP_002634141.1 224476535 7550401 1065378..1065995 1 NC_012121.1 (P37467) XpaC protein; Hypothetical protein; 5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC 1065995 7550401 Sca_1048 Staphylococcus carnosus subsp. carnosus TM300 5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC YP_002634141.1 1065378 D 396513 CDS YP_002634142.1 224476536 7550402 1066016..1067143 1 NC_012121.1 (Q8CP87) TelA-like protein SE1089,InterPro: Toxic anion resistance; Hypothetical protein; putative toxic anion resistance (TelA) family protein 1067143 7550402 Sca_1049 Staphylococcus carnosus subsp. carnosus TM300 putative toxic anion resistance (TelA) family protein YP_002634142.1 1066016 D 396513 CDS YP_002634143.1 224476537 7550403 1067272..1068192 1 NC_012121.1 (P39074) Protein bmrU,InterPro: Conserved hypothetical protein 147; Hypothetical protein; hypothetical protein 1068192 7550403 Sca_1050 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634143.1 1067272 D 396513 CDS YP_002634144.1 224476538 7550404 complement(1068241..1069584) 1 NC_012121.1 (O34545) Branched-chain amino acid transport system carrier protein braB (Branched-chain amino acid uptake carrier braB),InterPro: Branched-chain amino acid transport system II carrier protein; Hypothetical protein; putative branched-chain amino acid carrier 1069584 brnQ 7550404 brnQ Staphylococcus carnosus subsp. carnosus TM300 putative branched-chain amino acid carrier YP_002634144.1 1068241 R 396513 CDS YP_002634145.1 224476539 7551449 complement(1069857..1071746) 1 NC_012121.1 InterPro: von Willebrand factor type A; Hypothetical protein; hypothetical protein 1071746 7551449 Sca_1052 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634145.1 1069857 R 396513 CDS YP_002634146.1 224476540 7550405 complement(1071759..1072550) 1 NC_012121.1 (Q02441) Denitrification regulatory protein nirQ,InterPro: AAA ATPase; Hypothetical protein; hypothetical protein 1072550 7550405 Sca_1053 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634146.1 1071759 R 396513 CDS YP_002634147.1 224476541 7550406 complement(1072641..1072847) 1 NC_012121.1 (Q61703) Inter-alpha-trypsin inhibitor heavy chain H2 precursor (ITI heavy chain H2) (Inter-alpha-inhibitor heavy chain 2); Hypothetical protein; hypothetical protein 1072847 7550406 Sca_1054 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634147.1 1072641 R 396513 CDS YP_002634148.1 224476542 7550407 complement(1072874..1073689) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1073689 7550407 Sca_1055 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634148.1 1072874 R 396513 CDS YP_002634149.1 224476543 7550408 1073859..1074038 1 NC_012121.1 Hypothetical protein; hypothetical protein 1074038 7550408 Sca_1056 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634149.1 1073859 D 396513 CDS YP_002634150.1 224476544 7550409 complement(1074306..1075583) 1 NC_012121.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1075583 odhB 7550409 odhB Staphylococcus carnosus subsp. carnosus TM300 dihydrolipoamide succinyltransferase YP_002634150.1 1074306 R 396513 CDS YP_002634151.1 224476545 7551878 complement(1075595..1078390) 1 NC_012121.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1078390 sucA 7551878 sucA Staphylococcus carnosus subsp. carnosus TM300 2-oxoglutarate dehydrogenase E1 component YP_002634151.1 1075595 R 396513 CDS YP_002634152.1 224476546 7551877 complement(1078587..1079951) 1 NC_012121.1 (O34638) Hypothetical sensor-like histidine kinase ykoH (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; putative sensor protein histidine kinase 1079951 7551877 Sca_1059 Staphylococcus carnosus subsp. carnosus TM300 putative sensor protein histidine kinase YP_002634152.1 1078587 R 396513 CDS YP_002634153.1 224476547 7550410 complement(1079948..1080610) 1 NC_012121.1 (O78428) Probable transcriptional regulator ycf27 (OmpR-like protein),InterPro: Response regulator receiver; Hypothetical protein; putative response regulator protein 1080610 7550410 Sca_1060 Staphylococcus carnosus subsp. carnosus TM300 putative response regulator protein YP_002634153.1 1079948 R 396513 CDS YP_002634154.1 224476548 7550411 complement(1081017..1081640) 1 NC_012121.1 InterPro: PA-phosphatase related phosphoesterase; Hypothetical protein; putative membrane integrated acid phosphatase family protein 1081640 7550411 Sca_1061 Staphylococcus carnosus subsp. carnosus TM300 putative membrane integrated acid phosphatase family protein YP_002634154.1 1081017 R 396513 CDS YP_002634155.1 224476549 7550412 complement(1081641..1082729) 1 NC_012121.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 1082729 murG 7550412 murG Staphylococcus carnosus subsp. carnosus TM300 UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase YP_002634155.1 1081641 R 396513 CDS YP_002634156.1 224476550 7551825 complement(1082741..1083253) 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative acetyltransferase 1083253 7551825 Sca_1063 Staphylococcus carnosus subsp. carnosus TM300 putative acetyltransferase YP_002634156.1 1082741 R 396513 CDS YP_002634157.1 224476551 7550413 complement(1083267..1084736) 1 NC_012121.1 (Q55669) Carboxyl-terminal processing protease precursor (EC 3.4.21.102),InterPro: Carboxyl-terminal protease; Hypothetical protein; putative protease 1084736 7550413 Sca_1064 Staphylococcus carnosus subsp. carnosus TM300 putative protease YP_002634157.1 1083267 R 396513 CDS YP_002634158.1 224476552 7550414 complement(1084893..1085114) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1085114 7550414 Sca_1065 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634158.1 1084893 R 396513 CDS YP_002634159.1 224476553 7550415 complement(1085114..1085614) 1 NC_012121.1 (Q8CP79) PTS system glucose-specific IIA component (EIIA-Glc) (Glucose-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Glc),InterPro: Sugar-specific permease EIIA 1 domain; Hypothetical protein; PTS system, glucose-specific IIA component 1085614 crr 7550415 crr Staphylococcus carnosus subsp. carnosus TM300 PTS system, glucose-specific IIA component YP_002634159.1 1085114 R 396513 CDS YP_002634160.1 224476554 7551484 complement(1085617..1086057) 1 NC_012121.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1086057 7551484 Sca_1067 Staphylococcus carnosus subsp. carnosus TM300 methionine sulfoxide reductase B YP_002634160.1 1085617 R 396513 CDS YP_002634161.1 224476555 7550416 complement(1086050..1086577) 1 NC_012121.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1086577 7550416 Sca_1068 Staphylococcus carnosus subsp. carnosus TM300 methionine sulfoxide reductase A YP_002634161.1 1086050 R 396513 CDS YP_002634162.1 224476556 7550417 complement(1086676..1087512) 1 NC_012121.1 (Q8NWR0) Hypothetical UPF0230 protein MW1315,InterPro: DegV; Hypothetical protein; hypothetical protein 1087512 7550417 Sca_1069 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634162.1 1086676 R 396513 CDS YP_002634163.1 224476557 7550418 complement(1087525..1088007) 1 NC_012121.1 (Q59908) Dihydrofolate reductase (EC 1.5.1.3) (DHFR),InterPro: Dihydrofolate reductase; Hypothetical protein; dihydrofolate reductase 1088007 dfrA 7550418 dfrA Staphylococcus carnosus subsp. carnosus TM300 dihydrofolate reductase YP_002634163.1 1087525 R 396513 CDS YP_002634164.1 224476558 7551521 complement(1088051..1089004) 1 NC_012121.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1089004 thyA 7551521 thyA Staphylococcus carnosus subsp. carnosus TM300 thymidylate synthase YP_002634164.1 1088051 R 396513 CDS YP_002634165.1 224476559 7552188 complement(1089106..1089540) 1 NC_012121.1 (P54170) Hypothetical protein yphP; Hypothetical protein; hypothetical protein 1089540 7552188 Sca_1072 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634165.1 1089106 R 396513 CDS YP_002634166.1 224476560 7550419 complement(1089625..1090743) 1 NC_012121.1 (P54169) Hypothetical protein ypgR,InterPro: PBS lyase HEAT-like repeat; Hypothetical protein; hypothetical protein 1090743 7550419 Sca_1073 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634166.1 1089625 R 396513 CDS YP_002634167.1 224476561 7550420 1091158..1091865 1 NC_012121.1 (P54163) Hypothetical protein ypdP,InterPro: Protein of unknown function DUF165; Hypothetical protein; hypothetical protein 1091865 7550420 Sca_1074 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634167.1 1091158 D 396513 CDS YP_002634168.1 224476562 7550421 1091910..1092302 1 NC_012121.1 (P54162) 14.7 kDa ribonuclease H-like protein,InterPro: RNase H; Hypothetical protein; hypothetical protein 1092302 7550421 Sca_1075 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634168.1 1091910 D 396513 CDS YP_002634169.1 224476563 7550422 complement(1092353..1093240) 1 NC_012121.1 (P52026) DNA polymerase I (EC 2.7.7.7) (POL I),InterPro: 5-3 exonuclease,Similar to N-terminal part of DNA PolI (responsible for 5'-3'-exonucleolytic activity); Hypothetical protein; putative 5'-3' exonuclease 1093240 7550422 Sca_1076 Staphylococcus carnosus subsp. carnosus TM300 putative 5'-3' exonuclease YP_002634169.1 1092353 R 396513 CDS YP_002634170.1 224476564 7550423 complement(1093261..1096707) 1 NC_012121.1 (P54159) Hypothetical protein ypbR; Hypothetical protein; hypothetical protein 1096707 7550423 Sca_1077 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634170.1 1093261 R 396513 CDS YP_002634171.1 224476565 7550424 complement(1096858..1097754) 1 NC_012121.1 (P27844) Protein rarD,InterPro: RarD protein; Hypothetical protein; hypothetical protein 1097754 7550424 Sca_1078 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634171.1 1096858 R 396513 CDS YP_002634172.1 224476566 7550425 complement(1097780..1098904) 1 NC_012121.1 (P44524) Hypothetical UPF0020/UPF0064 protein HI0116,InterPro: Putative RNA methylase; Hypothetical protein; putative RNA methylase 1098904 7550425 Sca_1079 Staphylococcus carnosus subsp. carnosus TM300 putative RNA methylase YP_002634172.1 1097780 R 396513 CDS YP_002634173.1 224476567 7550426 complement(1099521..1099850) 1 NC_012121.1 (P50839) Hypothetical protein ypsB,InterPro: DivIVA (only 75% aligned); Hypothetical protein; hypothetical protein 1099850 7550426 Sca_1080 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634173.1 1099521 R 396513 CDS YP_002634174.1 224476568 7550427 complement(1099863..1100429) 1 NC_012121.1 (P50838) Hypothetical protein ypsA,Weak SD sequence; Hypothetical protein; hypothetical protein 1100429 7550427 Sca_1081 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634174.1 1099863 R 396513 CDS YP_002634175.1 224476569 7550428 complement(1100422..1100763) 1 NC_012121.1 (P53273) Hypothetical 117.0 kDa protein in ASN2-PHB1 intergenic region; Hypothetical protein; hypothetical protein 1100763 7550428 Sca_1082 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634175.1 1100422 R 396513 CDS YP_002634176.1 224476570 7550429 1101024..1101650 1 NC_012121.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1101650 recU 7550429 recU Staphylococcus carnosus subsp. carnosus TM300 Holliday junction-specific endonuclease YP_002634176.1 1101024 D 396513 CDS YP_002634177.1 224476571 7552018 1101647..1103917 1 NC_012121.1 (P39793) Penicillin-binding protein 1A/1B (PBP1) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)],InterPro: Penicillin-binding protein transpeptidase domain; Hypothetical protein; penicillin-binding protein 2 1103917 pbp2 7552018 pbp2 Staphylococcus carnosus subsp. carnosus TM300 penicillin-binding protein 2 YP_002634177.1 1101647 D 396513 CDS YP_002634178.1 224476572 7551905 complement(1103963..1104295) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1104295 7551905 Sca_1085 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634178.1 1103963 R 396513 CDS YP_002634179.1 224476573 7550430 complement(1104308..1104979) 1 NC_012121.1 (P39788) Probable endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase),InterPro: Endonuclease III/Nth; Hypothetical protein; putative endonuclease III 1104979 nth 7550430 nth Staphylococcus carnosus subsp. carnosus TM300 putative endonuclease III YP_002634179.1 1104308 R 396513 CDS YP_002634180.1 224476574 7551868 complement(1104980..1105657) 1 NC_012121.1 (P39787) DNA replication protein dnaD,InterPro: DnaD and phage-associated domain; Hypothetical protein; DNA replication protein DnaD 1105657 dnaD 7551868 dnaD Staphylococcus carnosus subsp. carnosus TM300 DNA replication protein DnaD YP_002634180.1 1104980 R 396513 CDS YP_002634181.1 224476575 7551531 complement(1105755..1107047) 1 NC_012121.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1107047 asnC 7551531 asnC Staphylococcus carnosus subsp. carnosus TM300 asparaginyl-tRNA synthetase YP_002634181.1 1105755 R 396513 CDS YP_002634182.1 224476576 7551427 complement(1107205..1109892) 1 NC_012121.1 (P54394) Probable ATP-dependent helicase dinG homolog,InterPro: DnaQ exonuclease/DinG helicase; Hypothetical protein; hypothetical protein 1109892 7551427 Sca_1089 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634182.1 1107205 R 396513 CDS YP_002634183.1 224476577 7550431 complement(1109908..1110879) 1 NC_012121.1 (P42975) BirA bifunctional protein [Includes: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase (EC 6.3.4.15) (Biotin--protein ligase)],InterPro: Biotin--acetyl-CoA-carboxylase ligase; Hypothetical protein; putative bifunctional protein [includes: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase 1110879 birA 7550431 birA Staphylococcus carnosus subsp. carnosus TM300 putative bifunctional protein [includes: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase YP_002634183.1 1109908 R 396513 CDS YP_002634184.1 224476578 7551446 complement(1110866..1112068) 1 NC_012121.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 1112068 pap 7551446 pap Staphylococcus carnosus subsp. carnosus TM300 tRNA CCA-pyrophosphorylase YP_002634184.1 1110866 R 396513 CDS YP_002634185.1 224476579 7551902 complement(1112071..1113192) 1 NC_012121.1 (P42982) Putative glycosyl transferase ypjH (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein; putative glycosyltransferase 1113192 7551902 Sca_1092 Staphylococcus carnosus subsp. carnosus TM300 putative glycosyltransferase YP_002634185.1 1112071 R 396513 CDS YP_002634186.1 224476580 7550432 complement(1113221..1113538) 1 NC_012121.1 (P42979) Hypothetical protein ypjD,InterPro: MazG family protein; Hypothetical protein; putative pyrophosphatase (MazG family) 1113538 7550432 Sca_1093 Staphylococcus carnosus subsp. carnosus TM300 putative pyrophosphatase (MazG family) YP_002634186.1 1113221 R 396513 CDS YP_002634187.1 224476581 7550433 complement(1113665..1114363) 1 NC_012121.1 InterPro: Putative neutral zinc metallopeptidase 2; Hypothetical protein; hypothetical protein 1114363 7550433 Sca_1094 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634187.1 1113665 R 396513 CDS YP_002634188.1 224476582 7550434 complement(1114390..1115004) 1 NC_012121.1 (P54392) Hypothetical protein ypjA; Hypothetical protein; hypothetical protein 1115004 7550434 Sca_1095 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634188.1 1114390 R 396513 CDS YP_002634189.1 224476583 7550435 complement(1115009..1115566) 1 NC_012121.1 (Q99U27) Hypothetical UPF0302 protein SAV1462/SA1295/MW1352; Hypothetical protein; hypothetical protein 1115566 7550435 Sca_1096 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634189.1 1115009 R 396513 CDS YP_002634190.1 224476584 7550436 complement(1115585..1116832) 1 NC_012121.1 (P54389) Hypothetical protein ypiA,InterPro: TPR repeat; Hypothetical protein; hypothetical protein 1116832 7550436 Sca_1097 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634190.1 1115585 R 396513 CDS YP_002634191.1 224476585 7550437 complement(1116837..1118135) 1 NC_012121.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1118135 aroA 7550437 aroA Staphylococcus carnosus subsp. carnosus TM300 3-phosphoshikimate 1-carboxyvinyltransferase YP_002634191.1 1116837 R 396513 CDS YP_002634192.1 224476586 7551417 complement(1118145..1119221) 1 NC_012121.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1119221 aroB 7551417 aroB Staphylococcus carnosus subsp. carnosus TM300 3-dehydroquinate synthase YP_002634192.1 1118145 R 396513 CDS YP_002634193.1 224476587 7551419 complement(1119237..1120403) 1 NC_012121.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1120403 aroC 7551419 aroC Staphylococcus carnosus subsp. carnosus TM300 chorismate synthase YP_002634193.1 1119237 R 396513 CDS YP_002634194.1 224476588 7551420 complement(1120627..1121079) 1 NC_012121.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1121079 ndk 7551420 ndk Staphylococcus carnosus subsp. carnosus TM300 nucleoside diphosphate kinase YP_002634194.1 1120627 R 396513 CDS YP_002634195.1 224476589 7551851 complement(1121185..1122141) 1 NC_012121.1 (P31114) Heptaprenyl diphosphate synthase component II (EC 2.5.1.30) (HEPPP synthase subunit 2) (Spore germination protein C3),InterPro: Polyprenyl synthetase; Hypothetical protein; putative heptaprenyl diphosphate synthase component II 1122141 gerCC 7551851 gerCC Staphylococcus carnosus subsp. carnosus TM300 putative heptaprenyl diphosphate synthase component II YP_002634195.1 1121185 R 396513 CDS YP_002634196.1 224476590 7551625 complement(1122143..1122868) 1 NC_012121.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1122868 ubiE 7551625 ubiE Staphylococcus carnosus subsp. carnosus TM300 ubiquinone/menaquinone biosynthesis methyltransferase YP_002634196.1 1122143 R 396513 CDS YP_002634197.1 224476591 7551624 complement(1122870..1123442) 1 NC_012121.1 (P31112) Heptaprenyl diphosphate synthase component I (EC 2.5.1.30) (HEPPP synthase subunit 1) (Spore germination protein C1),Only weak similarity to similar to component A of hexaprenyl diphosphate synthase!; Hypothetical protein; hypothetical protein 1123442 7551624 Sca_1104 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634197.1 1122870 R 396513 CDS YP_002634198.1 224476592 7550438 complement(1123661..1123933) 1 NC_012121.1 (P02346) DNA-binding protein HU (DNA-binding protein II) (HB),InterPro: Histone-like bacterial DNA-binding protein; Hypothetical protein; DNA-binding protein HU 1123933 hup 7550438 hup Staphylococcus carnosus subsp. carnosus TM300 DNA-binding protein HU YP_002634198.1 1123661 R 396513 CDS YP_002634199.1 224476593 7551708 complement(1124104..1125102) 1 NC_012121.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1125102 gpsA 7551708 gpsA Staphylococcus carnosus subsp. carnosus TM300 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002634199.1 1124104 R 396513 CDS YP_002634200.1 224476594 7551663 complement(1125131..1126441) 1 NC_012121.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1126441 engA 7551663 engA Staphylococcus carnosus subsp. carnosus TM300 GTP-binding protein EngA YP_002634200.1 1125131 R 396513 CDS YP_002634201.1 224476595 7550439 complement(1126594..1127772) 1 NC_012121.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1127772 rpsA 7550439 rpsA Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S1 YP_002634201.1 1126594 R 396513 CDS YP_002634202.1 224476596 7550440 complement(1127992..1128654) 1 NC_012121.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1128654 cmk 7550440 cmk Staphylococcus carnosus subsp. carnosus TM300 cytidylate kinase YP_002634202.1 1127992 R 396513 CDS YP_002634203.1 224476597 7551477 1128732..1129706 1 NC_012121.1 (P30363) L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) (L-ASNase),InterPro: Asparaginase/glutaminase; Hypothetical protein; putative L-asparaginase 1129706 7551477 Sca_1110 Staphylococcus carnosus subsp. carnosus TM300 putative L-asparaginase YP_002634203.1 1128732 D 396513 CDS YP_002634204.1 224476598 7550441 complement(1129762..1130748) 1 NC_012121.1 (P50736) Hypothetical protein ypdA,InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein; putative pyridine nucleotide-disulfide reductase 1130748 7550441 Sca_1111 Staphylococcus carnosus subsp. carnosus TM300 putative pyridine nucleotide-disulfide reductase YP_002634204.1 1129762 R 396513 CDS YP_002634205.1 224476599 7550442 complement(1130892..1132535) 1 NC_012121.1 InterPro: Peptidoglycan-binding LysM; Hypothetical protein; putative elastin binding protein 1132535 7550442 Sca_1112 Staphylococcus carnosus subsp. carnosus TM300 putative elastin binding protein YP_002634205.1 1130892 R 396513 CDS YP_002634206.1 224476600 7550443 complement(1132833..1134215) 1 NC_012121.1 (P50729) ATP-dependent DNA helicase recQ (EC 3.6.1.-) (Recombination protein S),InterPro: ATP-dependent DNA helicase RecQ,Similar to C-terminal part of E.coli RecQ; Hypothetical protein; putative ATP-dependent DNA helicase 1134215 7550443 Sca_1113 Staphylococcus carnosus subsp. carnosus TM300 putative ATP-dependent DNA helicase YP_002634206.1 1132833 R 396513 CDS YP_002634207.1 224476601 7550444 complement(1134218..1135171) 1 NC_012121.1 (P50728) Hypothetical protein ypbB; Hypothetical protein; hypothetical protein 1135171 7550444 Sca_1114 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634207.1 1134218 R 396513 CDS YP_002634208.1 224476602 7550445 1135279..1135527 1 NC_012121.1 (P10245) Ferredoxin,InterPro: 3Fe-4S ferredoxin; Hypothetical protein; ferredoxin 1135527 7550445 Sca_1115 Staphylococcus carnosus subsp. carnosus TM300 ferredoxin YP_002634208.1 1135279 D 396513 CDS YP_002634209.1 224476603 7550446 complement(1135664..1136212) 1 NC_012121.1 (P50726) Hypothetical protein ypaA; Hypothetical protein; hypothetical protein 1136212 7550446 Sca_1116 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634209.1 1135664 R 396513 CDS YP_002634210.1 224476604 7550447 complement(1136482..1138236) 1 NC_012121.1 (P35164) Sensor protein resE (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; respiratory response protein SrrB 1138236 srrB 7550447 srrB Staphylococcus carnosus subsp. carnosus TM300 respiratory response protein SrrB YP_002634210.1 1136482 R 396513 CDS YP_002634211.1 224476605 7552144 complement(1138217..1138939) 1 NC_012121.1 (P35163) Transcriptional regulatory protein resD,InterPro: Response regulator receiver; Hypothetical protein; respiratory response regulator receiver SrrA 1138939 srrA 7552144 srrA Staphylococcus carnosus subsp. carnosus TM300 respiratory response regulator receiver SrrA YP_002634211.1 1138217 R 396513 CDS YP_002634212.1 224476606 7552143 complement(1139254..1139991) 1 NC_012121.1 (Q8ZP51) Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase Rsu; Hypothetical protein; ribosomal large subunit pseudouridine synthase B 1139991 rluB 7552143 rluB Staphylococcus carnosus subsp. carnosus TM300 ribosomal large subunit pseudouridine synthase B YP_002634212.1 1139254 R 396513 CDS YP_002634213.1 224476607 7552028 complement(1139984..1140532) 1 NC_012121.1 (Q7ZAJ3) Segregation and condensation protein B,InterPro: Conserved hypothetical protein 281,Similar to segregation and condensation protein B of B. subtilis:,Score = 116 bits (291), Expect = 2e-26,Identities = 77/181 (42%), Positives = 109/181 (60%), Gaps = 15/181 (8%); Hypothetical protein; putative segregation and condensation protein B 1140532 scpB 7552028 scpB Staphylococcus carnosus subsp. carnosus TM300 putative segregation and condensation protein B YP_002634213.1 1139984 R 396513 CDS YP_002634214.1 224476608 7552113 complement(1140516..1141253) 1 NC_012121.1 (P60223) Segregation and condensation protein A,InterPro: Protein of unknown function DUF173,Similar to segregation and condensation protein A of B. subtilis:,Score = 167 bits (422), Expect = 7e-67,Identities = 103/241 (42%), Positives = 158/241 (65%),Gaps = 7/241 (2%); Hypothetical protein; putative segregation and condensation protein A 1141253 scpA 7552113 scpA Staphylococcus carnosus subsp. carnosus TM300 putative segregation and condensation protein A YP_002634214.1 1140516 R 396513 CDS YP_002634215.1 224476609 7552112 1141350..1141853 1 NC_012121.1 (P17617) Hypothetical protein ypuF (ORFX6),InterPro: Protein of unknown function DUF309; Hypothetical protein; hypothetical protein 1141853 7552112 Sca_1122 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634215.1 1141350 D 396513 CDS YP_002634216.1 224476610 7550448 complement(1141896..1142795) 1 NC_012121.1 (Q7ZAJ2) Tyrosine recombinase xerD,InterPro: Phage integrase; Hypothetical protein; putative site-specific recombinase XerD 1142795 xerD 7550448 xerD Staphylococcus carnosus subsp. carnosus TM300 putative site-specific recombinase XerD YP_002634216.1 1141896 R 396513 CDS YP_002634217.1 224476611 7552301 complement(1142818..1143270) 1 NC_012121.1 (P54574) Ferric uptake regulation protein (Ferric uptake regulator),InterPro: Ferric-uptake regulator; Hypothetical protein; iron uptake regulatory protein 1143270 fur 7552301 fur Staphylococcus carnosus subsp. carnosus TM300 iron uptake regulatory protein YP_002634217.1 1142818 R 396513 CDS YP_002634218.1 224476612 7551600 complement(1143376..1143918) 1 NC_012121.1 (P54570) ADP-ribose pyrophosphatase (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (ASPPase),InterPro: NUDIX hydrolase; Hypothetical protein; putative ADP-ribose pyrophosphatase 1143918 nudF 7551600 nudF Staphylococcus carnosus subsp. carnosus TM300 putative ADP-ribose pyrophosphatase YP_002634218.1 1143376 R 396513 CDS YP_002634219.1 224476613 7551871 1144004..1144912 1 NC_012121.1 (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-),InterPro: Aldo/keto reductase; Hypothetical protein; hypothetical protein 1144912 7551871 Sca_1126 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634219.1 1144004 D 396513 CDS YP_002634220.1 224476614 7550449 complement(1144937..1145704) 1 NC_012121.1 (P54554) Hypothetical oxidoreductase yqjQ (EC 1.-.-.-),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative short chain dehydrogenase 1145704 7550449 Sca_1127 Staphylococcus carnosus subsp. carnosus TM300 putative short chain dehydrogenase YP_002634220.1 1144937 R 396513 CDS YP_002634221.1 224476615 7550450 1145853..1146662 1 NC_012121.1 (P54552) Pyrroline-5-carboxylate reductase 2 (EC 1.5.1.2) (P5CR 2) (P5C reductase 2),InterPro: Delta 1-pyrroline-5-carboxylate reductase; Hypothetical protein; putative pyrroline-5-carboxylate reductase 1146662 7550450 Sca_1128 Staphylococcus carnosus subsp. carnosus TM300 putative pyrroline-5-carboxylate reductase YP_002634221.1 1145853 D 396513 CDS YP_002634222.1 224476616 7550451 complement(1146712..1147632) 1 NC_012121.1 (Q8NWE6) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNA 3 endonuclease),InterPro: Beta-lactamase-like; Hypothetical protein; putative ribonuclease Z 1147632 rnz 7550451 rnz Staphylococcus carnosus subsp. carnosus TM300 putative ribonuclease Z YP_002634222.1 1146712 R 396513 CDS YP_002634223.1 224476617 7552035 1147774..1149258 1 NC_012121.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1149258 zwf 7552035 zwf Staphylococcus carnosus subsp. carnosus TM300 glucose-6-phosphate 1-dehydrogenase YP_002634223.1 1147774 D 396513 CDS YP_002634224.1 224476618 7552306 1149419..1150282 1 NC_012121.1 InterPro: Helix-turn-helix AraC type; Hypothetical protein; AraC family transcriptional regulator 1150282 7552306 Sca_1131 Staphylococcus carnosus subsp. carnosus TM300 AraC family transcriptional regulator YP_002634224.1 1149419 D 396513 CDS YP_002634225.1 224476619 7550452 complement(1150336..1151745) 1 NC_012121.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1151745 gnd 7550452 gnd Staphylococcus carnosus subsp. carnosus TM300 6-phosphogluconate dehydrogenase YP_002634225.1 1150336 R 396513 CDS YP_002634226.1 224476620 7551656 complement(1151820..1152953) 1 NC_012121.1 Interpro: Peptidase_M20; Hypothetical protein; putative peptidase 1152953 7551656 Sca_1133 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase YP_002634226.1 1151820 R 396513 CDS YP_002634227.1 224476621 7550453 1153015..1153242 1 NC_012121.1 Weak Shine-Dalgarno sequence!; Hypothetical protein; hypothetical protein 1153242 7550453 Sca_1134 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634227.1 1153015 D 396513 CDS YP_002634228.1 224476622 7550454 complement(1153311..1154288) 1 NC_012121.1 (P54538) Hypothetical protein yqjA; Hypothetical protein; hypothetical protein 1154288 7550454 Sca_1135 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634228.1 1153311 R 396513 CDS YP_002634229.1 224476623 7550455 complement(1154301..1154738) 1 NC_012121.1 (P54534) Hypothetical protein yqiW; Hypothetical protein; hypothetical protein 1154738 7550455 Sca_1136 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634229.1 1154301 R 396513 CDS YP_002634230.1 224476624 7550456 complement(1154836..1156131) 1 NC_012121.1 (P37942) Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) (Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase) (E2) (Dihydrolipoamide branched chain transacylase),InterPro: Catalytic domain of components of various dehydrogenase complexes; Hypothetical protein; putative dihydrolipoamide branched chain transacylase (E2) 1156131 bmfBB 7550456 bmfBB Staphylococcus carnosus subsp. carnosus TM300 putative dihydrolipoamide branched chain transacylase (E2) YP_002634230.1 1154836 R 396513 CDS YP_002634231.1 224476625 7551447 complement(1156150..1157133) 1 NC_012121.1 (P37941) 2-oxoisovalerate dehydrogenase beta subunit (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta),InterPro: Transketolase central region; Hypothetical protein; branched-chain alpha-keto acid dehydrogenase E1 component beta chain 1157133 bfmBAB 7551447 bfmBAB Staphylococcus carnosus subsp. carnosus TM300 branched-chain alpha-keto acid dehydrogenase E1 component beta chain YP_002634231.1 1156150 R 396513 CDS YP_002634232.1 224476626 7551440 complement(1157133..1158125) 1 NC_012121.1 (P37940) 2-oxoisovalerate dehydrogenase alpha subunit (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha),InterPro: Dehydrogenase E1 component; Hypothetical protein; putative branched-chain alpha-keto acid dehydrogenase E1 component alpha chain 1158125 bfmBAA 7551440 bfmBAA Staphylococcus carnosus subsp. carnosus TM300 putative branched-chain alpha-keto acid dehydrogenase E1 component alpha chain YP_002634232.1 1157133 R 396513 CDS YP_002634233.1 224476627 7551439 complement(1158144..1159568) 1 NC_012121.1 (P54533) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of branched-chain alpha-keto acid dehydrogenase complex) (LPD-Val) (Dihydrolipoamide dehydrogenase),InterPro: Dihydrolipoamide dehydrogenase; Hypothetical protein; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex 1159568 bfmBC 7551439 bfmBC Staphylococcus carnosus subsp. carnosus TM300 putative E3 component of branched-chain alpha-keto acid dehydrogenase complex YP_002634233.1 1158144 R 396513 CDS YP_002634234.1 224476628 7551441 complement(1159579..1160637) 1 NC_012121.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 1160637 buk 7551441 buk Staphylococcus carnosus subsp. carnosus TM300 butyrate kinase YP_002634234.1 1159579 R 396513 CDS YP_002634235.1 224476629 7551450 complement(1160844..1161734) 1 NC_012121.1 (Q05624) Phosphate butyryltransferase (EC 2.3.1.19) (Phosphotransbutyrylase),InterPro: Phosphate acetyl/butaryl transferase; Hypothetical protein; putative phosphate butyryltransferase 1161734 7551450 Sca_1142 Staphylococcus carnosus subsp. carnosus TM300 putative phosphate butyryltransferase YP_002634235.1 1160844 R 396513 CDS YP_002634236.1 224476630 7550457 complement(1161761..1163440) 1 NC_012121.1 (P17894) DNA repair protein recN (Recombination protein N),InterPro: DNA repair protein RecN; Hypothetical protein; DNA repair protein RecN 1163440 recN 7550457 recN Staphylococcus carnosus subsp. carnosus TM300 DNA repair protein RecN YP_002634236.1 1161761 R 396513 CDS YP_002634237.1 224476631 7552014 complement(1163455..1163907) 1 NC_012121.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1163907 argR 7552014 argR Staphylococcus carnosus subsp. carnosus TM300 arginine repressor YP_002634237.1 1163455 R 396513 CDS YP_002634238.1 224476632 7551415 complement(1164149..1165027) 1 NC_012121.1 (Q08291) Geranyltranstransferase (EC 2.5.1.10) (Farnesyl-diphosphate synthase) (FPP synthase),InterPro: Polyprenyl synthetase; Hypothetical protein; geranyltranstransferase 1165027 7551415 Sca_1145 Staphylococcus carnosus subsp. carnosus TM300 geranyltranstransferase YP_002634238.1 1164149 R 396513 CDS YP_002634239.1 224476633 7550458 complement(1165020..1165241) 1 NC_012121.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1165241 7550458 Sca_1146 Staphylococcus carnosus subsp. carnosus TM300 exodeoxyribonuclease VII small subunit YP_002634239.1 1165020 R 396513 CDS YP_002634240.1 224476634 7550459 complement(1165234..1166574) 1 NC_012121.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1166574 xseA 7550459 xseA Staphylococcus carnosus subsp. carnosus TM300 exodeoxyribonuclease VII large subunit YP_002634240.1 1165234 R 396513 CDS YP_002634241.1 224476635 7550460 complement(1166593..1166979) 1 NC_012121.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1166979 nusB 7550460 nusB Staphylococcus carnosus subsp. carnosus TM300 transcription antitermination protein NusB YP_002634241.1 1166593 R 396513 CDS YP_002634242.1 224476636 7551874 complement(1167000..1167371) 1 NC_012121.1 (P54519) Hypothetical protein yqhY,InterPro: Protein of unknown function DUF322; Hypothetical protein; hypothetical protein 1167371 7551874 Sca_1149 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634242.1 1167000 R 396513 CDS YP_002634243.1 224476637 7550461 complement(1167393..1168745) 1 NC_012121.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1168745 accC 7550461 accC Staphylococcus carnosus subsp. carnosus TM300 acetyl-CoA carboxylase biotin carboxylase subunit YP_002634243.1 1167393 R 396513 CDS YP_002634244.1 224476638 7551360 complement(1168748..1169218) 1 NC_012121.1 (Q9PKR5) Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP),InterPro: Acetyl-CoA biotin carboxyl carrier; Hypothetical protein; putative acetyl-CoA carboxylase biotin carboxyl carrier subunit 1169218 accB 7551360 accB Staphylococcus carnosus subsp. carnosus TM300 putative acetyl-CoA carboxylase biotin carboxyl carrier subunit YP_002634244.1 1168748 R 396513 CDS YP_002634245.1 224476639 7551359 complement(1169468..1170025) 1 NC_012121.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1170025 efp 7551359 efp Staphylococcus carnosus subsp. carnosus TM300 elongation factor P YP_002634245.1 1169468 R 396513 CDS YP_002634246.1 224476640 7551547 complement(1170053..1171111) 1 NC_012121.1 (P54518) Putative peptidase yqhT (EC 3.4.-.-),InterPro: Metallopeptidase M24; Hypothetical protein; putative peptidase 1171111 7551547 Sca_1153 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase YP_002634246.1 1170053 R 396513 CDS YP_002634247.1 224476641 7550462 1171343..1171930 1 NC_012121.1 (P13103) Hemagglutinin precursor [Contains: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]; Hypothetical protein; hypothetical protein 1171930 7550462 Sca_1154 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634247.1 1171343 D 396513 CDS YP_002634248.1 224476642 7550463 1171962..1172177 1 NC_012121.1 (Q8DQ94) DNA translocase ftsK; Hypothetical protein; hypothetical protein 1172177 7550463 Sca_1155 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634248.1 1171962 D 396513 CDS YP_002634249.1 224476643 7550464 complement(1172226..1173056) 1 NC_012121.1 (P54511) Hypothetical protein yqhM,InterPro: Biotin/lipoate A/B protein ligase domain; Hypothetical protein; putative biotin/lipoate A/B protein ligase family protein 1173056 7550464 Sca_1156 Staphylococcus carnosus subsp. carnosus TM300 putative biotin/lipoate A/B protein ligase family protein YP_002634249.1 1172226 R 396513 CDS YP_002634250.1 224476644 7550465 1173239..1173625 1 NC_012121.1 (P54510) Hypothetical protein yqhL,InterPro: Rhodanese-like; Hypothetical protein; putative rhodanese domain-containing protein 1173625 7550465 Sca_1157 Staphylococcus carnosus subsp. carnosus TM300 putative rhodanese domain-containing protein YP_002634250.1 1173239 D 396513 CDS YP_002634251.1 224476645 7550466 complement(1173731..1174480) 1 NC_012121.1 (Q9K936) Probable glycine dehydrogenase [decarboxylating] subunit 2 (EC 1.4.4.2) (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2),similar to C-terminus of glycine dehydrogenase subunit 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305]; Hypothetical protein; glycine dehydrogenase [decarboxylating] subunit 2(fragment 1) 1174480 gcvPB'' 7550466 gcvPB'' Staphylococcus carnosus subsp. carnosus TM300 glycine dehydrogenase [decarboxylating] subunit 2(fragment 1) YP_002634251.1 1173731 R 396513 CDS YP_002634252.1 224476646 7551619 complement(1174456..1175205) 1 NC_012121.1 (Q8NWD0) Probable glycine dehydrogenase [decarboxylating] subunit 2 (EC 1.4.4.2) (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2),note: similar to N-terminus of glycine dehydrogenase subunit 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (BAE18365); Hypothetical protein; glycine dehydrogenase [decarboxylating] subunit 2(fragment 1) 1175205 gcvPB' 7551619 gcvPB' Staphylococcus carnosus subsp. carnosus TM300 glycine dehydrogenase [decarboxylating] subunit 2(fragment 1) YP_002634252.1 1174456 R 396513 CDS YP_002634253.1 224476647 7551618 complement(1175198..1176544) 1 NC_012121.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 1176544 gcvPA 7551618 gcvPA Staphylococcus carnosus subsp. carnosus TM300 glycine dehydrogenase subunit 1 YP_002634253.1 1175198 R 396513 CDS YP_002634254.1 224476648 7551617 complement(1176565..1177659) 1 NC_012121.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1177659 gcvT 7551617 gcvT Staphylococcus carnosus subsp. carnosus TM300 glycine cleavage system aminomethyltransferase T YP_002634254.1 1176565 R 396513 CDS YP_002634255.1 224476649 7551620 complement(1177850..1178389) 1 NC_012121.1 (Q99TV6) Shikimate kinase (EC 2.7.1.71) (SK),InterPro: Shikimate kinase,Similar to AroK of E. coli:,Score = 73.9 bits (180), Expect = 2e-13,Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 3/149 (2%); Hypothetical protein; putative shikimate kinase 1178389 aroK 7551620 aroK Staphylococcus carnosus subsp. carnosus TM300 putative shikimate kinase YP_002634255.1 1177850 R 396513 CDS YP_002634256.1 224476650 7551423 complement(1179252..1179704) 1 NC_012121.1 No detectable SD sequence,Signal peptide predicted by SignalP3.0; Hypothetical protein; hypothetical protein 1179704 7551423 Sca_1163 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634256.1 1179252 R 396513 CDS YP_002634257.1 224476651 7550467 complement(1179685..1180011) 1 NC_012121.1 (Q8VQ71) ComG operon protein 3 homolog precursor (Late competence protein comGC),InterPro: Bacterial general secretion pathway protein G; Hypothetical protein; general secretion pathway protein G 1180011 7550467 Sca_1164 Staphylococcus carnosus subsp. carnosus TM300 general secretion pathway protein G YP_002634257.1 1179685 R 396513 CDS YP_002634258.1 224476652 7550468 complement(1180029..1181102) 1 NC_012121.1 (P25954) ComG operon protein,InterPro: Bacterial type II secretion system protein; Hypothetical protein; type II secretion system protein PulF 1181102 7550468 Sca_1165 Staphylococcus carnosus subsp. carnosus TM300 type II secretion system protein PulF YP_002634258.1 1180029 R 396513 CDS YP_002634259.1 224476653 7550469 complement(1181074..1182048) 1 NC_012121.1 (P25953) ComG operon protein,InterPro: Bacterial type II secretion system protein E; Hypothetical protein; type II secretion system protein E 1182048 7550469 Sca_1166 Staphylococcus carnosus subsp. carnosus TM300 type II secretion system protein E YP_002634259.1 1181074 R 396513 CDS YP_002634260.1 224476654 7550470 complement(1182119..1182742) 1 NC_012121.1 (P54501) Hypothetical protein yqgX,InterPro: Beta-lactamase-like; Hypothetical protein; putative member of metallo-beta-lactamase superfamily 1182742 7550470 Sca_1167 Staphylococcus carnosus subsp. carnosus TM300 putative member of metallo-beta-lactamase superfamily YP_002634260.1 1182119 R 396513 CDS YP_002634261.1 224476655 7550471 complement(1182742..1183071) 1 NC_012121.1 (Q56200) Hypothetical UPF0045 protein in glkA 3region (ORF2) (S. xylosus C2A),InterPro: Protein of unknown function DUF77; Hypothetical protein; hypothetical protein 1183071 7550471 Sca_1168 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634261.1 1182742 R 396513 CDS YP_002634262.1 224476656 7550472 complement(1183071..1184057) 1 NC_012121.1 (Q56198) Glucokinase (EC 2.7.1.2) (Glucose kinase),InterPro: ROK family protein (putative glucokinase); Hypothetical protein; glucokinase 1184057 glcA 7550472 glcA Staphylococcus carnosus subsp. carnosus TM300 glucokinase YP_002634262.1 1183071 R 396513 CDS YP_002634263.1 224476657 7551630 complement(1184057..1184257) 1 NC_012121.1 (P54494) Hypothetical protein yqgQ; Hypothetical protein; hypothetical protein 1184257 7551630 Sca_1170 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634263.1 1184057 R 396513 CDS YP_002634264.1 224476658 7550473 complement(1184238..1185698) 1 NC_012121.1 (P54493) Hypothetical protein yqgP,InterPro: Rhomboid-like protein; Hypothetical protein; hypothetical protein 1185698 7550473 Sca_1171 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634264.1 1184238 R 396513 CDS YP_002634265.1 224476659 7550474 complement(1185715..1186257) 1 NC_012121.1 (Q9D110) 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) (510-methenyl-tetrahydrofolate synthetase) (Methenyl-THF synthetase) (MTHFS),InterPro: 5-formyltetrahydrofolate cyclo-ligase; Hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase 1186257 7550474 Sca_1172 Staphylococcus carnosus subsp. carnosus TM300 5-formyltetrahydrofolate cyclo-ligase YP_002634265.1 1185715 R 396513 CDS YP_002634266.1 224476660 7550475 complement(1186435..1188480) 1 NC_012121.1 (P54488) Hypothetical protein yqgF,InterPro: Penicillin-binding protein transpeptidase domain,Homolog to penicillin-binding protein Pbp2b [Staphylococcus aureus]:,Score = 1046 bits (2704), Expect = 0.0,Identities = 515/678 (75%), Positives = 588/678 (85%); Hypothetical protein; penicillin-binding protein Pbp2b 1188480 pbpF 7550475 pbpF Staphylococcus carnosus subsp. carnosus TM300 penicillin-binding protein Pbp2b YP_002634266.1 1186435 R 396513 CDS YP_002634267.1 224476661 7551909 complement(1188681..1189286) 1 NC_012121.1 superoxide dismutase 1189286 sod 7551909 sod Staphylococcus carnosus subsp. carnosus TM300 superoxide dismutase YP_002634267.1 1188681 R 396513 CDS YP_002634268.1 224476662 7552138 complement(1189486..1189893) 1 NC_012121.1 (P54204) Ferric uptake regulation protein (Ferric uptake regulator),InterPro: Ferric-uptake regulator; Hypothetical protein; putative ferric uptake regulator 1189893 fur 7552138 fur Staphylococcus carnosus subsp. carnosus TM300 putative ferric uptake regulator YP_002634268.1 1189486 R 396513 CDS YP_002634269.1 224476663 7551601 complement(1189895..1190743) 1 NC_012121.1 (Q56955) Chelated iron transport system membrane protein yfeD,InterPro: ABC transporter family 3; Hypothetical protein; putative ABC transporter permease MreB 1190743 mreB 7551601 mreB Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease MreB YP_002634269.1 1189895 R 396513 CDS YP_002634270.1 224476664 7551811 complement(1190743..1191513) 1 NC_012121.1 (Q9XDA6) Zinc uptake system ATP-binding protein zurA,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATPase MreA 1191513 mreA 7551811 mreA Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATPase MreA YP_002634270.1 1190743 R 396513 CDS YP_002634271.1 224476665 7551810 complement(1191629..1192519) 1 NC_012121.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1192519 7551810 Sca_1178 Staphylococcus carnosus subsp. carnosus TM300 endonuclease IV YP_002634271.1 1191629 R 396513 CDS YP_002634272.1 224476666 7550476 complement(1192537..1193877) 1 NC_012121.1 (P44586) Cold-shock DEAD-box protein A homolog (ATP-dependent RNA helicase deaD homolog),InterPro: DEAD/DEAH box helicase; Hypothetical protein; putative helicase 1193877 7550476 Sca_1179 Staphylococcus carnosus subsp. carnosus TM300 putative helicase YP_002634272.1 1192537 R 396513 CDS YP_002634273.1 224476667 7550477 complement(1193901..1194995) 1 NC_012121.1 (Q99TT7) Hypothetical UPF0135 protein SAV1559/SA1388,InterPro: Protein of unknown function DUF34; Hypothetical protein; hypothetical protein 1194995 7550477 Sca_1180 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634273.1 1193901 R 396513 CDS YP_002634274.1 224476668 7550478 complement(1194992..1195666) 1 NC_012121.1 COG2384 Predicted SAM-dependent methyltransferase,(P54471) Hypothetical protein yqfN; Hypothetical protein; hypothetical protein 1195666 7550478 Sca_1181 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634274.1 1194992 R 396513 CDS YP_002634275.1 224476669 7550479 complement(1195815..1196924) 1 NC_012121.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 1196924 sigA 7550479 sigA Staphylococcus carnosus subsp. carnosus TM300 RNA polymerase sigma factor RpoD YP_002634275.1 1195815 R 396513 CDS YP_002634276.1 224476670 7552129 complement(1197016..1198794) 1 NC_012121.1 (O05338) DNA primase (EC 2.7.7.-),InterPro: DNA primase; Hypothetical protein; putative DNA primase DnaG 1198794 dnaG 7552129 dnaG Staphylococcus carnosus subsp. carnosus TM300 putative DNA primase DnaG YP_002634276.1 1197016 R 396513 CDS YP_002634277.1 224476671 7551533 complement(1198916..1199746) 1 NC_012121.1 (Q8CSD7) Hypothetical UPF0085 protein SE1250,InterPro: Protein of unknown function DUF299; Hypothetical protein; hypothetical protein 1199746 7551533 Sca_1185 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634277.1 1198916 R 396513 CDS YP_002634278.1 224476672 7550480 complement(1199759..1200250) 1 NC_012121.1 (Q9LEV3) Protein At5g10860 mitochondrial precursor,InterPro: CBS domain,Similar to C-terminal part of CBS domain protein of Staphylococcus epidermidis (strain ATCC 35984 / RP62A) [TaxID:176279] (Q5HNY4),According to similarity, truncation of about 41 aa.; Hypothetical protein; CBS domain-containing protein 1200250 7550480 Sca_1186 Staphylococcus carnosus subsp. carnosus TM300 CBS domain-containing protein YP_002634278.1 1199759 R 396513 CDS YP_002634279.1 224476673 7550481 1200881..1202272 1 NC_012121.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 1202272 glyS 7550481 glyS Staphylococcus carnosus subsp. carnosus TM300 glycyl-tRNA synthetase YP_002634279.1 1200881 D 396513 CDS YP_002634280.1 224476674 7551654 complement(1202321..1203076) 1 NC_012121.1 (P42095) DNA repair protein recO (Recombination protein O),InterPro: Recombination protein O RecO; Hypothetical protein; putative recombination protein O 1203076 recO 7551654 recO Staphylococcus carnosus subsp. carnosus TM300 putative recombination protein O YP_002634280.1 1202321 R 396513 CDS YP_002634281.1 224476675 7552015 complement(1203102..1204001) 1 NC_012121.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1204001 era 7552015 era Staphylococcus carnosus subsp. carnosus TM300 GTP-binding protein Era YP_002634281.1 1203102 R 396513 CDS YP_002634282.1 224476676 7551549 complement(1203998..1204405) 1 NC_012121.1 (Q9S3M0) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) (CDA),InterPro: Cytidine deaminase homotetrameric; Hypothetical protein; putative cytidine deaminase 1204405 cdd 7551549 cdd Staphylococcus carnosus subsp. carnosus TM300 putative cytidine deaminase YP_002634282.1 1203998 R 396513 CDS YP_002634283.1 224476677 7551465 complement(1204426..1204764) 1 NC_012121.1 (Q05888) Diacylglycerol kinase (EC 2.7.1.107) (DAGK) (Diglyceride kinase) (DGK),InterPro: Prokaryotic diacylglycerol kinase; Hypothetical protein; putative diacylglycerol kinase 1204764 dgk 7551465 dgk Staphylococcus carnosus subsp. carnosus TM300 putative diacylglycerol kinase YP_002634283.1 1204426 R 396513 CDS YP_002634284.1 224476678 7551522 complement(1204768..1205229) 1 NC_012121.1 (Q99TS6) Hypothetical UPF0054 protein SAV1570/SA1399,InterPro: Protein of unknown function UPF0054; Hypothetical protein; hypothetical protein 1205229 7551522 Sca_1192 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634284.1 1204768 R 396513 CDS YP_002634285.1 224476679 7550482 complement(1205235..1206182) 1 NC_012121.1 Hypothetical protein; PhoH-like protein 1206182 phoH 7550482 phoH Staphylococcus carnosus subsp. carnosus TM300 PhoH-like protein YP_002634285.1 1205235 R 396513 CDS YP_002634286.1 224476680 7551939 complement(1206403..1207044) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1207044 7551939 Sca_1194 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634286.1 1206403 R 396513 CDS YP_002634287.1 224476681 7550483 complement(1207058..1208044) 1 NC_012121.1 (P54466) Hypothetical protein yqfA,Signal peptide prediction by SignalP 3.0 (cleavage between 33 and 34); Hypothetical protein; hypothetical protein 1208044 7550483 Sca_1195 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634287.1 1207058 R 396513 CDS YP_002634288.1 224476682 7550484 complement(1208064..1208780) 1 NC_012121.1 (P54465) Hypothetical protein yqeZ; Hypothetical protein; hypothetical protein 1208780 7550484 Sca_1196 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634288.1 1208064 R 396513 CDS YP_002634289.1 224476683 7550485 complement(1208987..1209163) 1 NC_012121.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1209163 rpsU 7550485 rpsU Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S21 YP_002634289.1 1208987 R 396513 CDS YP_002634290.1 224476684 7552095 complement(1209294..1210640) 1 NC_012121.1 (P54462) Hypothetical UPF0004 protein yqeV,InterPro: Protein of unknown function UPF0004; Hypothetical protein; putative radical SAM family protein 1210640 7552095 Sca_1198 Staphylococcus carnosus subsp. carnosus TM300 putative radical SAM family protein YP_002634290.1 1209294 R 396513 CDS YP_002634291.1 224476685 7550486 complement(1210646..1211398) 1 NC_012121.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1211398 7550486 Sca_1199 Staphylococcus carnosus subsp. carnosus TM300 16S ribosomal RNA methyltransferase RsmE YP_002634291.1 1210646 R 396513 CDS YP_002634292.1 224476686 7550487 complement(1211400..1212338) 1 NC_012121.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 1212338 prmA 7550487 prmA Staphylococcus carnosus subsp. carnosus TM300 ribosomal protein L11 methyltransferase YP_002634292.1 1211400 R 396513 CDS YP_002634293.1 224476687 7550488 complement(1212345..1213478) 1 NC_012121.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1213478 dnaJ 7550488 dnaJ Staphylococcus carnosus subsp. carnosus TM300 chaperone protein DnaJ YP_002634293.1 1212345 R 396513 CDS YP_002634294.1 224476688 7551535 complement(1213657..1215480) 1 NC_012121.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1215480 dnaK 7551535 dnaK Staphylococcus carnosus subsp. carnosus TM300 molecular chaperone DnaK YP_002634294.1 1213657 R 396513 CDS YP_002634295.1 224476689 7551536 complement(1215533..1216129) 1 NC_012121.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1216129 grpE 7551536 grpE Staphylococcus carnosus subsp. carnosus TM300 heat shock protein GrpE YP_002634295.1 1215533 R 396513 CDS YP_002634296.1 224476690 7551667 complement(1216157..1217125) 1 NC_012121.1 (Q9F1W4) Heat-inducible transcription repressor hrcA,InterPro: Negative regulator of class I heat shock protein; Hypothetical protein; putative heat-inducible transcriptional repressor 1217125 hrcA 7551667 hrcA Staphylococcus carnosus subsp. carnosus TM300 putative heat-inducible transcriptional repressor YP_002634296.1 1216157 R 396513 CDS YP_002634297.1 224476691 7551704 complement(1217230..1218351) 1 NC_012121.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1218351 hemN 7551704 hemN Staphylococcus carnosus subsp. carnosus TM300 coproporphyrinogen III oxidase YP_002634297.1 1217230 R 396513 CDS YP_002634298.1 224476692 7551685 complement(1218420..1220243) 1 NC_012121.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1220243 lepA 7551685 lepA Staphylococcus carnosus subsp. carnosus TM300 GTP-binding protein LepA YP_002634298.1 1218420 R 396513 CDS YP_002634299.1 224476693 7551741 1220508..1220759 1 NC_012121.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1220759 rpsT 7551741 rpsT Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S20 YP_002634299.1 1220508 D 396513 CDS YP_002634300.1 224476694 7552094 complement(1220792..1221766) 1 NC_012121.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1221766 holA 7552094 holA Staphylococcus carnosus subsp. carnosus TM300 DNA polymerase III subunit delta YP_002634300.1 1220792 R 396513 CDS YP_002634301.1 224476695 7550489 complement(1221840..1222178) 1 NC_012121.1 (P44408) Recombination protein,Similar to C-terminal part of protein similar to similar to late competence protein ComEC [Staphylococcus aureus subsp. aureus Mu50] (BAB57750); Hypothetical protein; hypothetical protein 1222178 7550489 Sca_1209 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634301.1 1221840 R 396513 CDS YP_002634302.1 224476696 7550490 complement(1222193..1224076) 1 NC_012121.1 (P39695) ComE operon protein,InterPro: ComEC/Rec2-related protein,Similar to N-terminal part of protein similar to ComEC late competence protein 3 of Staphylococcus haemolyticus (strain JCSC1435) [TaxID:279808] (Q4L6T9); Hypothetical protein; hypothetical protein 1224076 7550490 Sca_1210 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634302.1 1222193 R 396513 CDS YP_002634303.1 224476697 7550491 complement(1224084..1224545) 1 NC_012121.1 (P32393) ComE operon protein,InterPro: Cytidine/deoxycytidylate deaminase zinc-binding region; Hypothetical protein; putative deaminase 1224545 7550491 Sca_1211 Staphylococcus carnosus subsp. carnosus TM300 putative deaminase YP_002634303.1 1224084 R 396513 CDS YP_002634304.1 224476698 7550492 complement(1224620..1225288) 1 NC_012121.1 (P39694) ComE operon protein,InterPro: Competence protein ComEA helix-hairpin-helix region; Hypothetical protein; hypothetical protein 1225288 7550492 Sca_1212 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634304.1 1224620 R 396513 CDS YP_002634305.1 224476699 7550493 complement(1225337..1226053) 1 NC_012121.1 (P54458) Hypothetical protein yqeM,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein; hypothetical protein 1226053 7550493 Sca_1213 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634305.1 1225337 R 396513 CDS YP_002634306.1 224476700 7550494 complement(1226056..1226406) 1 NC_012121.1 (P05848) Hypothetical protein ybeB,InterPro: Iojap-related protein; Hypothetical protein; hypothetical protein 1226406 7550494 Sca_1214 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634306.1 1226056 R 396513 CDS YP_002634307.1 224476701 7550495 complement(1226407..1226991) 1 NC_012121.1 (P54456) Hypothetical protein yqeK,InterPro: Conserved hypothetical protein 488; Hypothetical protein; putative metal dependent phosphohydrolase 1226991 7550495 Sca_1215 Staphylococcus carnosus subsp. carnosus TM300 putative metal dependent phosphohydrolase YP_002634307.1 1226407 R 396513 CDS YP_002634308.1 224476702 7550496 complement(1226981..1227604) 1 NC_012121.1 (Q8CSC1) Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase),InterPro: Probable nicotinate-nucleotide adenylyltransferase; Hypothetical protein; putative nicotinate-nucleotide adenylyltransferase 1227604 nad 7550496 nad Staphylococcus carnosus subsp. carnosus TM300 putative nicotinate-nucleotide adenylyltransferase YP_002634308.1 1226981 R 396513 CDS YP_002634309.1 224476703 7551837 complement(1227555..1227845) 1 NC_012121.1 (P54454) Hypothetical UPF0044 protein yqeI,InterPro: Protein of unknown function UPF0044,Crystal structure of E. coli YhbY has been determined. A role in translation is postulated.; Hypothetical protein; hypothetical protein 1227845 7551837 Sca_1217 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634309.1 1227555 R 396513 CDS YP_002634310.1 224476704 7550497 complement(1227846..1228655) 1 NC_012121.1 (Q8CP09) Shikimate 5-dehydrogenase (EC 1.1.1.25),InterPro: Shikimate 5-dehydrogenase,Similar to AroE of E. coli:,Score = 126 bits (316), Expect = 7e-29,Identities = 94/275 (34%), Positives = 142/275 (51%),Gaps = 22/275 (8%); Hypothetical protein; putative shikimate 5-dehydrogenease 1228655 aroE 7550497 aroE Staphylococcus carnosus subsp. carnosus TM300 putative shikimate 5-dehydrogenease YP_002634310.1 1227846 R 396513 CDS YP_002634311.1 224476705 7551422 complement(1228665..1229765) 1 NC_012121.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH 1229765 7551422 Sca_1219 Staphylococcus carnosus subsp. carnosus TM300 GTP-binding protein YqeH YP_002634311.1 1228665 R 396513 CDS YP_002634312.1 224476706 7550498 complement(1229766..1230293) 1 NC_012121.1 (P54452) Hypothetical protein yqeG,InterPro: HAD-superfamily hydrolase subfamily IIIA; Hypothetical protein; hypothetical protein 1230293 7550498 Sca_1220 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634312.1 1229766 R 396513 CDS YP_002634313.1 224476707 7550499 complement(1230313..1230999) 1 NC_012121.1 (P45113) MTA/SAH nucleosidase (5-methylthioadenosine nucleosidase) (EC 3.2.2.16) (S-adenosylhomocysteine nucleosidase) (EC 3.2.2.9),InterPro: Purine and other phosphorylases family 1,Similar to MtnN of B. subtilis:,>MTNN_BACSU,Length = 231,Score = 207 bits (526), Expect = 4e-73,Identities = 109/228 (47%),Positives = 165/228 (72%), Gaps = 1/228 (0%); Hypothetical protein; putative 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase 1230999 mtn 7550499 mtn Staphylococcus carnosus subsp. carnosus TM300 putative 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase YP_002634313.1 1230313 R 396513 CDS YP_002634314.1 224476708 7551817 complement(1231249..1231731) 1 NC_012121.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1231731 greA 7551817 greA Staphylococcus carnosus subsp. carnosus TM300 transcription elongation factor GreA YP_002634314.1 1231249 R 396513 CDS YP_002634315.1 224476709 7551664 complement(1231757..1232383) 1 NC_012121.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1232383 udk 7551664 udk Staphylococcus carnosus subsp. carnosus TM300 uridine kinase YP_002634315.1 1231757 R 396513 CDS YP_002634316.1 224476710 7552277 complement(1232557..1233654) 1 NC_012121.1 (P44700) Putative protease HI0419 (EC 3.4.-.-),InterPro: Peptidase U32,Similar to N-terminal part of putative peptidase [Staphylococcus aureus subsp. aureus MSSA476] (CAG43349),Due to sequence similarity, about 57 aa are missing at the C-terminus.; Hypothetical protein; hypothetical protein 1233654 7552277 Sca_1224 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634316.1 1232557 R 396513 CDS YP_002634317.1 224476711 7550500 complement(1233668..1234597) 1 NC_012121.1 (P44700) Putative protease HI0419 (EC 3.4.-.-),InterPro: Peptidase U32; Hypothetical protein; putative peptidase 1234597 7550500 Sca_1225 Staphylococcus carnosus subsp. carnosus TM300 putative peptidase YP_002634317.1 1233668 R 396513 CDS YP_002634318.1 224476712 7550501 complement(1234594..1235235) 1 NC_012121.1 (Q00719) O-methyltransferase (EC 2.1.1.-),InterPro: O-methyltransferase family 3; Hypothetical protein; putative O-methyltransferase 1235235 7550501 Sca_1226 Staphylococcus carnosus subsp. carnosus TM300 putative O-methyltransferase YP_002634318.1 1234594 R 396513 CDS YP_002634319.1 224476713 7550502 complement(1235528..1235839) 1 NC_012121.1 (O43309) Zinc finger protein; Hypothetical protein; hypothetical protein 1235839 7550502 Sca_1227 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634319.1 1235528 R 396513 CDS YP_002634320.1 224476714 7550503 complement(1235862..1236290) 1 NC_012121.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1236290 7550503 Sca_1228 Staphylococcus carnosus subsp. carnosus TM300 Holliday junction resolvase-like protein YP_002634320.1 1235862 R 396513 CDS YP_002634321.1 224476715 7550504 complement(1236293..1236556) 1 NC_012121.1 (Q7WY61) Hypothetical UPF0297 protein yrzL; Hypothetical protein; hypothetical protein 1236556 7550504 Sca_1229 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634321.1 1236293 R 396513 CDS YP_002634322.1 224476716 7550505 complement(1236625..1239255) 1 NC_012121.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1239255 alaS 7550505 alaS Staphylococcus carnosus subsp. carnosus TM300 alanyl-tRNA synthetase YP_002634322.1 1236625 R 396513 CDS YP_002634323.1 224476717 7551382 complement(1239562..1241982) 1 NC_012121.1 (Q58914) Hypothetical protein MJ1519,InterPro: Helicase RecD/TraA; Hypothetical protein; hypothetical protein 1241982 7551382 Sca_1231 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634323.1 1239562 R 396513 CDS YP_002634324.1 224476718 7550506 complement(1241986..1242657) 1 NC_012121.1 InterPro: TPR repeat; Hypothetical protein; hypothetical protein 1242657 7550506 Sca_1232 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634324.1 1241986 R 396513 CDS YP_002634325.1 224476719 7550507 complement(1242765..1243877) 1 NC_012121.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1243877 mnmA 7550507 mnmA Staphylococcus carnosus subsp. carnosus TM300 tRNA-specific 2-thiouridylase MnmA YP_002634325.1 1242765 R 396513 CDS YP_002634326.1 224476720 7550508 complement(1243880..1245019) 1 NC_012121.1 (Q8ZN40) Cysteine desulfurase (EC 2.8.1.7) (ThiI transpersulfidase) (NifS protein homolog),InterPro: Aminotransferase class V,Similar to E. coli IscS:,>ISCS_ECOLI,Length = 404,Score = 293 bits (749),Expect = 1e-165,Identities = 167/383 (43%), Positives = 232/383 (60%), Gaps = 8/383 (2%); Hypothetical protein; putative cysteine desulfurase 1245019 iscS 7550508 iscS Staphylococcus carnosus subsp. carnosus TM300 putative cysteine desulfurase YP_002634326.1 1243880 R 396513 CDS YP_002634327.1 224476721 7551724 1245201..1246199 1 NC_012121.1 (P45529) Hypothetical protein yhbW,InterPro: Bacterial luciferase; Hypothetical protein; putative luciferase-like monooxygenase 1246199 7551724 Sca_1235 Staphylococcus carnosus subsp. carnosus TM300 putative luciferase-like monooxygenase YP_002634327.1 1245201 D 396513 CDS YP_002634328.1 224476722 7550509 complement(1246240..1246446) 1 NC_012121.1 InterPro: CsbD-like; Hypothetical protein; hypothetical protein 1246446 7550509 Sca_1236 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634328.1 1246240 R 396513 CDS YP_002634329.1 224476723 7550510 complement(1246515..1246685) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1246685 7550510 Sca_1237 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634329.1 1246515 R 396513 CDS YP_002634330.1 224476724 7550511 complement(1246844..1247263) 1 NC_012121.1 (O69219) Hypothetical UPF0074 protein (ORF2),InterPro: Protein of unknown function UPF0074; Hypothetical protein; hypothetical protein 1247263 7550511 Sca_1238 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634330.1 1246844 R 396513 CDS YP_002634331.1 224476725 7550512 1247350..1248630 1 NC_012121.1 (P45262) Hypothetical protein HI1590,InterPro: AAA ATPase central region; Hypothetical protein; recombination factor protein RarA 1248630 7550512 Sca_1239 Staphylococcus carnosus subsp. carnosus TM300 recombination factor protein RarA YP_002634331.1 1247350 D 396513 CDS YP_002634332.1 224476726 7550513 complement(1248700..1249479) 1 NC_012121.1 (O13861) Hypothetical protein C1A6.10 in chromosome I,InterPro: UBA/THIF-type NAD/FAD binding fold; Hypothetical protein; hypothetical protein 1249479 7550513 Sca_1240 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634332.1 1248700 R 396513 CDS YP_002634333.1 224476727 7550514 complement(1249863..1251629) 1 NC_012121.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1251629 aspS 7550514 aspS Staphylococcus carnosus subsp. carnosus TM300 aspartyl-tRNA synthetase YP_002634333.1 1249863 R 396513 CDS YP_002634334.1 224476728 7551428 complement(1251633..1252919) 1 NC_012121.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1252919 hisS 7551428 hisS Staphylococcus carnosus subsp. carnosus TM300 histidyl-tRNA synthetase YP_002634334.1 1251633 R 396513 CDS YP_002634335.1 224476729 7551697 complement(1253249..1254124) 1 NC_012121.1 orf in full length conserved in staphylococci,local similarity to N-acetylmuramoyl-L-alanine amidase cwlB [Precursor],(EC 3.5.1.28), lytC, Bacillus subtilis, 496AA,201AA aligned, Expect = 2e-15, Identities = 59/198 (29%),Positives = 94/198 (47%), Gaps = 16/198 (8%),(Q02114) N-acetylmuramoyl-L-alanine amidase cwlB precursor (EC 3.5.1.28) (Cell wall hydrolase) (Autolysin),InterPro: Cell wall hydrolase/autolysin; Hypothetical protein; hypothetical protein 1254124 7551697 Sca_1243 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634335.1 1253249 R 396513 CDS YP_002634336.1 224476730 7550515 complement(1254121..1254573) 1 NC_012121.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1254573 7550515 Sca_1244 Staphylococcus carnosus subsp. carnosus TM300 D-tyrosyl-tRNA(Tyr) deacylase YP_002634336.1 1254121 R 396513 CDS YP_002634337.1 224476731 7550516 complement(1254589..1256778) 1 NC_012121.1 orf in full length conserved in staphylococci,,similar to GTP pyrophosphokinase relA (EC 2.7.6.5), Corynebacterium glutamicum (Brevibacterium flavum), 760AA, Expect = 1e-166, Identities = 287/726 (39%), Positives = 464/726 (63%), Gaps = 14/726 (1%),(O32419) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP 3-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase),InterPro: RelA/SpoT protein; Hypothetical protein; GTP pyrophosphokinase 1256778 relA 7550516 relA Staphylococcus carnosus subsp. carnosus TM300 GTP pyrophosphokinase YP_002634337.1 1254589 R 396513 CDS YP_002634338.1 224476732 7552019 complement(1257152..1257670) 1 NC_012121.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1257670 apt 7552019 apt Staphylococcus carnosus subsp. carnosus TM300 adenine phosphoribosyltransferase YP_002634338.1 1257152 R 396513 CDS YP_002634339.1 224476733 7551402 complement(1257690..1259966) 1 NC_012121.1 orf in full length conserved in staphylococci,N-terminal region is similar to single-stranded-DNA-specific exonuclease recJ (EC 3.1.-.-), Escherichia coli, 577AA,Expect = 0.0, Identities = 186/582 (31%), Positives = 301/582 (51%), Gaps = 40/582 (6%),(P21893) Single-stranded-DNA-specific exonuclease recJ (EC 3.1.-.-),InterPro: Bacterial RecJ exonuclease; Hypothetical protein; putative single-strand DNA-specific exonuclease 1259966 7551402 Sca_1247 Staphylococcus carnosus subsp. carnosus TM300 putative single-strand DNA-specific exonuclease YP_002634339.1 1257690 R 396513 CDS YP_002634340.1 224476734 7550517 complement(1260101..1262377) 1 NC_012121.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 1262377 secDF 7550517 secDF Staphylococcus carnosus subsp. carnosus TM300 bifunctional preprotein translocase subunit SecD/SecF YP_002634340.1 1260101 R 396513 CDS YP_002634341.1 224476735 7552121 complement(1262830..1263090) 1 NC_012121.1 (Q9KDI4) Hypothetical UPF0092 protein BH1229,InterPro: YajC; Hypothetical protein; hypothetical protein 1263090 7552121 Sca_1249 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634341.1 1262830 R 396513 CDS YP_002634342.1 224476736 7550518 complement(1263104..1264246) 1 NC_012121.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1264246 tgt 7550518 tgt Staphylococcus carnosus subsp. carnosus TM300 queuine tRNA-ribosyltransferase YP_002634342.1 1263104 R 396513 CDS YP_002634343.1 224476737 7552173 complement(1264262..1265287) 1 NC_012121.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1265287 queA 7552173 queA Staphylococcus carnosus subsp. carnosus TM300 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002634343.1 1264262 R 396513 CDS YP_002634344.1 224476738 7552005 complement(1265277..1266293) 1 NC_012121.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1266293 ruvB 7552005 ruvB Staphylococcus carnosus subsp. carnosus TM300 Holliday junction DNA helicase RuvB YP_002634344.1 1265277 R 396513 CDS YP_002634345.1 224476739 7552100 complement(1266318..1266923) 1 NC_012121.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1266923 ruvA 7552100 ruvA Staphylococcus carnosus subsp. carnosus TM300 Holliday junction DNA helicase RuvA YP_002634345.1 1266318 R 396513 CDS YP_002634346.1 224476740 7552099 complement(1266936..1267391) 1 NC_012121.1 similar to Bacillus subtilis possible chorismate mutase,(Q8CNZ8) ACT domain protein pheB,InterPro: Predicted ligand-binding protein with an ACT domain; Hypothetical protein; hypothetical protein 1267391 7552099 Sca_1254 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634346.1 1266936 R 396513 CDS YP_002634347.1 224476741 7550519 complement(1267402..1268694) 1 NC_012121.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1268694 obgE 7550519 obgE Staphylococcus carnosus subsp. carnosus TM300 GTPase ObgE YP_002634347.1 1267402 R 396513 CDS YP_002634348.1 224476742 7551876 complement(1268826..1269110) 1 NC_012121.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1269110 rpmA 7551876 rpmA Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L27 YP_002634348.1 1268826 R 396513 CDS YP_002634349.1 224476743 7552062 complement(1269122..1269442) 1 NC_012121.1 (P26942) Hypothetical protein ysxB,InterPro: Protein of unknown function DUF464; Hypothetical protein; hypothetical protein 1269442 7552062 Sca_1257 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634349.1 1269122 R 396513 CDS YP_002634350.1 224476744 7550520 complement(1269445..1269753) 1 NC_012121.1 Hypothetical protein; 50S ribosomal protein L21 1269753 rplU 7550520 rplU Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L21 YP_002634350.1 1269445 R 396513 CDS YP_002634351.1 224476745 7550521 complement(1269877..1270398) 1 NC_012121.1 orf conserved in staphylococci,,similar to Rod shape-determining protein mreD/rodB,Bacillus subtilis,172AA, Expect = 3e-41, Identities = 40/165 (24%),Positives = 72/165 (43%),(Q01467) Rod shape-determining protein mreD,InterPro: Rod shape-determining protein MreD; Hypothetical protein; hypothetical protein 1270398 7550521 Sca_1259 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634351.1 1269877 R 396513 CDS YP_002634352.1 224476746 7550522 complement(1270398..1271246) 1 NC_012121.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1271246 7550522 Sca_1260 Staphylococcus carnosus subsp. carnosus TM300 rod shape-determining protein MreC YP_002634352.1 1270398 R 396513 CDS YP_002634353.1 224476747 7550523 complement(1271455..1271595) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1271595 7550523 Sca_1261 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634353.1 1271455 R 396513 CDS YP_002634354.1 224476748 7550524 complement(1271686..1272150) 1 NC_012121.1 conserved in staphylococci; Hypothetical protein; hypothetical protein 1272150 7550524 Sca_1262 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634354.1 1271686 R 396513 CDS YP_002634355.1 224476749 7550525 1272299..1272469 1 NC_012121.1 Hypothetical protein; hypothetical protein 1272469 7550525 Sca_1263 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634355.1 1272299 D 396513 CDS YP_002634356.1 224476750 7550526 complement(1272525..1273205) 1 NC_012121.1 similar to DNA repair protein radC, Escherichia coli, 222AA, Expect = 1e-33, Identities = 78/212 (36%),Positives = 124/212 (58%), (Q8NW77) DNA repair protein radC homolog,InterPro: DNA repair protein RadC; Hypothetical protein; putative DNA repair protein RadC 1273205 radC 7550526 radC Staphylococcus carnosus subsp. carnosus TM300 putative DNA repair protein RadC YP_002634356.1 1272525 R 396513 CDS YP_002634357.1 224476751 7552007 complement(1273218..1273940) 1 NC_012121.1 no Shine Dalgarno sequence, no complete alignments,(Q56740) Type 4 prepilin-like proteins leader peptide processing enzyme [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)],InterPro: Prepilin cysteine protease (C20) type IV; Hypothetical protein; hypothetical protein 1273940 7552007 Sca_1265 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634357.1 1273218 R 396513 CDS YP_002634358.1 224476752 7550527 complement(1274134..1274553) 1 NC_012121.1 similar to C-terminus of folylpolyglutamate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_301192),(Q05865) Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS),InterPro: Cytoplasmic peptidoglycan synthetases C-terminal; Hypothetical protein; hypothetical protein 1274553 folC'' 7550527 folC'' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634358.1 1274134 R 396513 CDS YP_002634359.1 224476753 7551587 complement(1274585..1275403) 1 NC_012121.1 similar to N terminus folylpolyglutamate synthase folC (EC 6.3.2.17),Bacillus subtilis, 430AA, Expect = 2e-65, Identities = 129/257 (50%), Positives = 172/257 (66%),Gaps = 6/257 (2%) ,(Q05865) Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS),InterPro: Folylpolyglutamate synthetase,Similar to N-terminal part of folylpolyglutamate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_301192); Hypothetical protein; hypothetical protein 1275403 folC' 7551587 folC' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634359.1 1274585 R 396513 CDS YP_002634360.1 224476754 7551586 complement(1275415..1278045) 1 NC_012121.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1278045 valS 7551586 valS Staphylococcus carnosus subsp. carnosus TM300 valyl-tRNA synthetase YP_002634360.1 1275415 R 396513 CDS YP_002634361.1 224476755 7552293 1278356..1278916 1 NC_012121.1 similar to DNA-3-methyladenine glycosylase I, tag,(EC 3.2.2.20), Escherichia coli, 187AA, Expect = 3e-97,Identities = 79/183 (43%), Positives = 118/183 (64%) ,(P05100) DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I constitutive) (TAG I) (DNA-3-methyladenine glycosidase I),InterPro: Methyladenine glycosylase; Hypothetical protein; putative DNA-3-methyladenine glycosidase 1278916 tag 7552293 tag Staphylococcus carnosus subsp. carnosus TM300 putative DNA-3-methyladenine glycosidase YP_002634361.1 1278356 D 396513 CDS YP_002634362.1 224476756 7552156 1278954..1279595 1 NC_012121.1 similar to pyrrolidone-carboxylate peptidase pcp (EC 3.4.19.3),Bacillus amyloliquefaciens, 215AA, Expect = 2e-47, Identities = 101/215 (46%), Positives = 139/215 (64%), Gaps = 6/215 (2%),(Q8XKH1) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase),InterPro: Pyrrolidone-carboxylate/pyroglutamyl peptidase I (C15); Hypothetical protein; putative pyrrolidone-carboxylate peptidase 1279595 pcp 7552156 pcp Staphylococcus carnosus subsp. carnosus TM300 putative pyrrolidone-carboxylate peptidase YP_002634362.1 1278954 D 396513 CDS YP_002634363.1 224476757 7551912 complement(1279637..1280713) 1 NC_012121.1 (P75747) AbrB protein (AidB regulator),InterPro: Putative ammonia monooxygenase; Hypothetical protein; hypothetical protein 1280713 7551912 Sca_1272 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634363.1 1279637 R 396513 CDS YP_002634364.1 224476758 7550528 complement(1280861..1282150) 1 NC_012121.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1282150 hemL 7550528 hemL Staphylococcus carnosus subsp. carnosus TM300 glutamate-1-semialdehyde aminotransferase YP_002634364.1 1280861 R 396513 CDS YP_002634365.1 224476759 7551684 complement(1282152..1283135) 1 NC_012121.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1283135 hemB 7551684 hemB Staphylococcus carnosus subsp. carnosus TM300 delta-aminolevulinic acid dehydratase YP_002634365.1 1282152 R 396513 CDS YP_002634366.1 224476760 7551679 complement(1283132..1283821) 1 NC_012121.1 conserved in staphylococci,similar to uroporphyrinogen III cosynthase Bacillus subtilis subsp. subtilis, 262AA, 190AA aligned, Expect = 6e-09, Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 12/190,similar to C terminal porphyrin biosynthesis protein hemD, Clostridium josui, 504AA, Expect = 3e-12,Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 25/223 (11%) ,(Q59294) Porphyrin biosynthesis protein HEMD [Includes: Uroporphyrin-III C-methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM); Uroporphyrinogen-III synthase (EC 4.2.1.75) (UROS) (Uroporphyrin,InterPro: Uroporphyrinogen III synthase HEM4; Hypothetical protein; putative uroporphyrinogen III synthase 1283821 hemD 7551679 hemD Staphylococcus carnosus subsp. carnosus TM300 putative uroporphyrinogen III synthase YP_002634366.1 1283132 R 396513 CDS YP_002634367.1 224476761 7551681 complement(1283848..1284774) 1 NC_012121.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1284774 hemC 7551681 hemC Staphylococcus carnosus subsp. carnosus TM300 porphobilinogen deaminase YP_002634367.1 1283848 R 396513 CDS YP_002634368.1 224476762 7551680 complement(1284806..1285630) 1 NC_012121.1 similar to Protein hemX, Bacillus subtilis, 276AA,Expect = 4e-71,Identities = 88/272 (32%), Positives = 152/272 (55%), (P16645) Protein hemX,InterPro: Cytochrome c assembly protein; Hypothetical protein; hemA concentration negative effector 1285630 hemX 7551680 hemX Staphylococcus carnosus subsp. carnosus TM300 hemA concentration negative effector YP_002634368.1 1284806 R 396513 CDS YP_002634369.1 224476763 7551686 complement(1285653..1286990) 1 NC_012121.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1286990 hemA 7551686 hemA Staphylococcus carnosus subsp. carnosus TM300 glutamyl-tRNA reductase YP_002634369.1 1285653 R 396513 CDS YP_002634370.1 224476764 7551678 complement(1287272..1287859) 1 NC_012121.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1287859 engB 7551678 engB Staphylococcus carnosus subsp. carnosus TM300 ribosome biogenesis GTP-binding protein YsxC YP_002634370.1 1287272 R 396513 CDS YP_002634371.1 224476765 7550529 complement(1288010..1289272) 1 NC_012121.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1289272 clpX 7550529 clpX Staphylococcus carnosus subsp. carnosus TM300 ATP-dependent protease ATP-binding subunit ClpX YP_002634371.1 1288010 R 396513 CDS YP_002634372.1 224476766 7551476 complement(1289643..1290965) 1 NC_012121.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1290965 tig 7551476 tig Staphylococcus carnosus subsp. carnosus TM300 trigger factor YP_002634372.1 1289643 R 396513 CDS YP_002634373.1 224476767 7552189 complement(1291130..1292068) 1 NC_012121.1 (Q9HGN1) Probable serine/threonine-protein kinase C36B7.09 (EC 2.7.11.1); Hypothetical protein; hypothetical protein 1292068 7552189 Sca_1282 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634373.1 1291130 R 396513 CDS YP_002634374.1 224476768 7550530 complement(1292084..1292695) 1 NC_012121.1 (P50619) Hypothetical protein ymaB,InterPro: NUDIX hydrolase; Hypothetical protein; hypothetical protein 1292695 7550530 Sca_1283 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634374.1 1292084 R 396513 CDS YP_002634375.1 224476769 7550531 complement(1292843..1293199) 1 NC_012121.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1293199 rplT 7550531 rplT Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L20 YP_002634375.1 1292843 R 396513 CDS YP_002634376.1 224476770 7552057 complement(1293307..1293507) 1 NC_012121.1 similar to 50S ribosomal protein L35 rpmI, Bacillus stearothermophilus, ,(Q99TI2) 50S ribosomal protein L35,InterPro: Ribosomal protein L35; Hypothetical protein; 50S ribosomal protein L35 1293507 rpmI 7552057 rpmI Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L35 YP_002634376.1 1293307 R 396513 CDS YP_002634377.1 224476771 7552070 complement(1293538..1294065) 1 NC_012121.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1294065 infC 7552070 infC Staphylococcus carnosus subsp. carnosus TM300 translation initiation factor IF-3 YP_002634377.1 1293538 R 396513 CDS YP_002634378.1 224476772 7551722 complement(1294286..1295773) 1 NC_012121.1 similar to lysine-specific permease lysP,Escherichia coli, 488AA, Expect = 1e-133, Identities = 262/491 (53%), Positives = 346/491 (70%), Gaps = 17/491 (3%),(P48813) High-affinity glutamine permease,InterPro: Amino acid permease-associated region; Hypothetical protein; lysine-specific permease 1295773 lysP 7551722 lysP Staphylococcus carnosus subsp. carnosus TM300 lysine-specific permease YP_002634378.1 1294286 R 396513 CDS YP_002634379.1 224476773 7551762 1295802..1295894 1 NC_012121.1 Hypothetical protein; hypothetical protein 1295894 7551762 Sca_1288 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634379.1 1295802 D 396513 CDS YP_002634380.1 224476774 7550532 complement(1296101..1298044) 1 NC_012121.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1298044 thrS 7550532 thrS Staphylococcus carnosus subsp. carnosus TM300 threonyl-tRNA synthetase YP_002634380.1 1296101 R 396513 CDS YP_002634381.1 224476775 7552187 complement(1298367..1299290) 1 NC_012121.1 Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI 1299290 dnaI 7552187 dnaI Staphylococcus carnosus subsp. carnosus TM300 primosomal protein DnaI YP_002634381.1 1298367 R 396513 CDS YP_002634382.1 224476776 7551534 complement(1299287..1300708) 1 NC_012121.1 similar to replication initiation and membrane attachment protein dnaB, Bacillus subtilis, 472AA, Expect = 1e-157, Identities = 139/485 (28%), Positives = 238/485 (49%), Gaps = 58/485 (11%),(P07908) Replication initiation and membrane attachment protein; Hypothetical protein; chromosome replication initiation/membrane attachment protein 1300708 dnaB 7551534 dnaB Staphylococcus carnosus subsp. carnosus TM300 chromosome replication initiation/membrane attachment protein YP_002634382.1 1299287 R 396513 CDS YP_002634383.1 224476777 7551529 complement(1300711..1301184) 1 NC_012121.1 (Q8CS73) Hypothetical UPF0168 protein SE1360,InterPro: Protein of unknown function DUF193; Hypothetical protein; transcriptional regulator NrdR 1301184 nrdR 7551529 nrdR Staphylococcus carnosus subsp. carnosus TM300 transcriptional regulator NrdR YP_002634383.1 1300711 R 396513 CDS YP_002634384.1 224476778 7550533 complement(1301338..1302360) 1 NC_012121.1 (Q99TH5) Glyceraldehyde 3-phosphate dehydrogenase 2 (EC 1.2.1.12) (GAPDH 2),InterPro: Glyceraldehyde 3-phosphate dehydrogenase; Hypothetical protein; glyceraldehyde 3-phosphate dehydrogenase 2 1302360 gapB 7550533 gapB Staphylococcus carnosus subsp. carnosus TM300 glyceraldehyde 3-phosphate dehydrogenase 2 YP_002634384.1 1301338 R 396513 CDS YP_002634385.1 224476779 7551610 complement(1302517..1303143) 1 NC_012121.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1303143 coaE 7551610 coaE Staphylococcus carnosus subsp. carnosus TM300 dephospho-CoA kinase YP_002634385.1 1302517 R 396513 CDS YP_002634386.1 224476780 7551480 complement(1303161..1304033) 1 NC_012121.1 similar to formamidopyrimidine-DNA glycosylase mutM, (EC 4.2.99.18), Escherichia coli, 876AA, Expect = 0.0, Identities = 471/877 (53%), Positives = 619/877 (70%), Gaps = 7/877 (0%),(P05523) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (FAPY-DNA glycosylase),InterPro: Formamidopyrimidine-DNA glycolase; Hypothetical protein; formamidopyrimidine-DNA glycosylase 1304033 mutM 7551480 mutM Staphylococcus carnosus subsp. carnosus TM300 formamidopyrimidine-DNA glycosylase YP_002634386.1 1303161 R 396513 CDS YP_002634387.1 224476781 7551828 complement(1304049..1306679) 1 NC_012121.1 similar to DNA polymerase I polA, (EC 2.7.7.7),Bacillus stearothermophilus, 876AA, Expect = 0.0,Identities = 471/877 (53%), Positives = 619/877 (70%),Gaps = 7/877 (0%),(O34996) DNA polymerase I (EC 2.7.7.7) (POL I),InterPro: DNA polymerase family A; Hypothetical protein; DNA polymerase I 1306679 polA 7551828 polA Staphylococcus carnosus subsp. carnosus TM300 DNA polymerase I YP_002634387.1 1304049 R 396513 CDS YP_002634388.1 224476782 7551946 complement(1306775..1308484) 1 NC_012121.1 similar to alkaline phosphatase synthesis sensor protein phoR, (EC 2.7.3.-), Bacillus subtilis, 579AA,Expect = 1e-72, Identities = 188/571 (32%), Positives = 305/571 (53%), Gaps = 17/571 (2%),(P23545) Alkaline phosphatase synthesis sensor protein phoR (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; putative alkaline phosphatase synthesis sensor protein 1308484 phoR 7551946 phoR Staphylococcus carnosus subsp. carnosus TM300 putative alkaline phosphatase synthesis sensor protein YP_002634388.1 1306775 R 396513 CDS YP_002634389.1 224476783 7551941 complement(1308481..1309197) 1 NC_012121.1 similar to alkaline phosphatase synthesis transcriptional regulatory protein phoP, Bacillus subtilis, 240AA, Expect = 2e-75, Identities = 161/237 (67%), Positives = 194/237 (81%), Gaps = 2/237 (0%),(P13792) Alkaline phosphatase synthesis transcriptional regulatory protein phoP,InterPro: Response regulator receiver; Hypothetical protein; alkaline phosphatase synthesis transcriptional regulatory protein 1309197 phoP 7551941 phoP Staphylococcus carnosus subsp. carnosus TM300 alkaline phosphatase synthesis transcriptional regulatory protein YP_002634389.1 1308481 R 396513 CDS YP_002634390.1 224476784 7551940 complement(1309377..1310642) 1 NC_012121.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1310642 icd 7551940 icd Staphylococcus carnosus subsp. carnosus TM300 isocitrate dehydrogenase YP_002634390.1 1309377 R 396513 CDS YP_002634391.1 224476785 7551712 complement(1310706..1311824) 1 NC_012121.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 1311824 citZ 7551712 citZ Staphylococcus carnosus subsp. carnosus TM300 citrate synthase YP_002634391.1 1310706 R 396513 CDS YP_002634392.1 224476786 7551471 1312180..1313550 1 NC_012121.1 similar to D-serine/D-alanine/glycine transporter cycA, Escherichia coli, 470AA, Expect = 1e-127, Identities = 231/441 (52%), Positives = 327/441 (74%), Gaps = 2/441 (0%),InterPro: Amino acid permease-associated region; Hypothetical protein; D-serine/D-alanine/glycine transporter 1313550 cycA 7551471 cycA Staphylococcus carnosus subsp. carnosus TM300 D-serine/D-alanine/glycine transporter YP_002634392.1 1312180 D 396513 CDS YP_002634393.1 224476787 7551495 complement(1313884..1315644) 1 NC_012121.1 similar to Pyruvate kinase pyk, (EC 2.7.1.40),Bacillus stearothermophilus, 587AA, Expect = 0.0,Identities = 357/585 (61%), Positives = 448/585 (76%),(P51182) Pyruvate kinase (EC 2.7.1.40) (PK),InterPro: Pyruvate kinase; Hypothetical protein; pyruvate kinase 1315644 pykA 7551495 pykA Staphylococcus carnosus subsp. carnosus TM300 pyruvate kinase YP_002634393.1 1313884 R 396513 CDS YP_002634394.1 224476788 7551988 complement(1315676..1316644) 1 NC_012121.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 1316644 pfk 7551988 pfk Staphylococcus carnosus subsp. carnosus TM300 6-phosphofructokinase YP_002634394.1 1315676 R 396513 CDS YP_002634395.1 224476789 7551929 complement(1316962..1317909) 1 NC_012121.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1317909 accA 7551929 accA Staphylococcus carnosus subsp. carnosus TM300 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_002634395.1 1316962 R 396513 CDS YP_002634396.1 224476790 7551358 complement(1317902..1318774) 1 NC_012121.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1318774 accD 7551358 accD Staphylococcus carnosus subsp. carnosus TM300 acetyl-CoA carboxylase subunit beta YP_002634396.1 1317902 R 396513 CDS YP_002634397.1 224476791 7551361 complement(1318846..1320072) 1 NC_012121.1 similar to NAD-dependent malic enzyme (EC 1.1.1.38), Bacillus stearothermophilus, 478AA, Expect = 1e-116, Identities = 227/395 (57%), Positives = 277/395 (70%), Gaps = 4/395 (1%) ,(O34962) Probable NAD-dependent malic enzyme 4 (EC 1.1.1.38) (NAD-ME 4),InterPro: Malic oxidoreductase; Hypothetical protein; malate dehydrogenase 1320072 7551361 Sca_1307 Staphylococcus carnosus subsp. carnosus TM300 malate dehydrogenase YP_002634397.1 1318846 R 396513 CDS YP_002634398.1 224476792 7550535 complement(1320328..1323531) 1 NC_012121.1 (Q8CNX0) DNA polymerase III alpha subunit (EC 2.7.7.7),InterPro: DNA polymerase III alpha subunit; Hypothetical protein; DNA polymerase III subunit alpha 1323531 dnaE 7550535 dnaE Staphylococcus carnosus subsp. carnosus TM300 DNA polymerase III subunit alpha YP_002634398.1 1320328 R 396513 CDS YP_002634399.1 224476793 7551532 complement(1323557..1324498) 1 NC_012121.1 (Q49428) Hypothetical protein MG371,InterPro: Phosphoesterase RecJ-like; Hypothetical protein; hypothetical protein 1324498 7551532 Sca_1309 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634399.1 1323557 R 396513 CDS YP_002634400.1 224476794 7550536 complement(1324522..1325817) 1 NC_012121.1 (O58045) Inosine-5-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD),InterPro: CBS domain; Hypothetical protein; hypothetical protein 1325817 7550536 Sca_1310 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634400.1 1324522 R 396513 CDS YP_002634401.1 224476795 7550537 1326036..1326449 1 NC_012121.1 (P42297) Hypothetical protein yxiE precursor,InterPro: Usp domain; Hypothetical protein; hypothetical protein 1326449 7550537 Sca_1311 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634401.1 1326036 D 396513 CDS YP_002634402.1 224476796 7550538 complement(1326502..1327194) 1 NC_012121.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase 1327194 7550538 Sca_1312 Staphylococcus carnosus subsp. carnosus TM300 metal-dependent hydrolase YP_002634402.1 1326502 R 396513 CDS YP_002634403.1 224476797 7550539 1327335..1328390 1 NC_012121.1 similar to Xaa-Pro dipeptidase pepQ, EC 3.4.13.9,Lactobacillus delbrueckii (subsp. lactis), 368AA, Expect = 3e-72, Identities = 146/356 (41%), Positives = 210/356 (58%), Gaps = 8/356 (2%),(P46545) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase) (Proline dipeptidase) (Prolidase) (Imidodipeptidase),InterPro: Metallopeptidase M24; Hypothetical protein; putative Xaa-Pro dipeptidase 1328390 7550539 Sca_1313 Staphylococcus carnosus subsp. carnosus TM300 putative Xaa-Pro dipeptidase YP_002634403.1 1327335 D 396513 CDS YP_002634404.1 224476798 7550540 complement(1328559..1329674) 1 NC_012121.1 similar to alanine dehydrogenase ald (EC 1.4.1.1),Bacillus stearothermophilus, 372AA, Expect = 1e-159,Identities = 243/371 (65%), Positives = 288/371 (77%),Gaps = 2/371 (0%),(Q8NW54) Alanine dehydrogenase 2 (EC 1.4.1.1),InterPro: Alanine dehydrogenase and pyridine nucleotide transhydrogenase; Hypothetical protein; alanine dehydrogenase 1329674 ald 7550540 ald Staphylococcus carnosus subsp. carnosus TM300 alanine dehydrogenase YP_002634404.1 1328559 R 396513 CDS YP_002634405.1 224476799 7551383 1329883..1330386 1 NC_012121.1 (Q57951) Hypothetical protein MJ0531,InterPro: Usp domain; Hypothetical protein; hypothetical protein 1330386 7551383 Sca_1315 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634405.1 1329883 D 396513 CDS YP_002634406.1 224476800 7550541 complement(1330561..1331757) 1 NC_012121.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1331757 ackA 7550541 ackA Staphylococcus carnosus subsp. carnosus TM300 acetate kinase YP_002634406.1 1330561 R 396513 CDS YP_002634407.1 224476801 7551362 complement(1331840..1332787) 1 NC_012121.1 (P37876) Hypothetical protein ytxK; Hypothetical protein; hypothetical protein 1332787 7551362 Sca_1317 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634407.1 1331840 R 396513 CDS YP_002634408.1 224476802 7550542 complement(1332895..1333395) 1 NC_012121.1 similar to thiol peroxidase tpx, (EC 1.11.1.-),Escherichia coli,,167AA, Expect = 3e-32, Identities = 73/165 (44%), Positives = 108/165 (65%), Gaps = 7/165 (4%),(Q99TF0) Probable thiol peroxidase (EC 1.11.1.-),InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Hypothetical protein; putative thioredoxin peroxidase 1333395 7550542 Sca_1318 Staphylococcus carnosus subsp. carnosus TM300 putative thioredoxin peroxidase YP_002634408.1 1332895 R 396513 CDS YP_002634409.1 224476803 7550543 complement(1333614..1334387) 1 NC_012121.1 (P46490) Hypothetical protein HI0198,InterPro: Protein of unknown function DUF81; Hypothetical protein; hypothetical protein 1334387 7550543 Sca_1319 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634409.1 1333614 R 396513 CDS YP_002634410.1 224476804 7550544 complement(1334421..1335152) 1 NC_012121.1 (Q8NW49) Probable thiamine biosynthesis protein thiI,InterPro: Thiamine biosynthesis protein,Similar to C-terminus of thiamine biosynthesis protein ThiI [Staphylococcus epidermidis RP62A] (YP_188851); Hypothetical protein; hypothetical protein 1335152 thiI'' 7550544 thiI'' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634410.1 1334421 R 396513 CDS YP_002634411.1 224476805 7552181 complement(1335176..1335649) 1 NC_012121.1 (Q8CNW7) Probable thiamine biosynthesis protein thiI,Similar to N-terminus of putative thiamine biosynthesis ATP pyrophosphatase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_301138); Hypothetical protein; hypothetical protein 1335649 thiI' 7552181 thiI' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634411.1 1335176 R 396513 CDS YP_002634412.1 224476806 7552180 complement(1335646..1336785) 1 NC_012121.1 similar to Cysteine desulfurase iscS (EC 2.8.1.7),Escherichia coli, 404AA, Expect = 3e-53, Identities = 141/366 (38%), Positives = 211/366 (57%), Gaps = 12/366 (3%),(P31672) NifS/icsS protein homolog (Fragment),InterPro: Aminotransferase class V; Hypothetical protein; hypothetical protein 1336785 7552180 Sca_1322 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634412.1 1335646 R 396513 CDS YP_002634413.1 224476807 7550545 complement(1336925..1338625) 1 NC_012121.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA 1338625 7550545 Sca_1323 Staphylococcus carnosus subsp. carnosus TM300 septation ring formation regulator EzrA YP_002634413.1 1336925 R 396513 CDS YP_002634414.1 224476808 7550546 1338808..1339182 1 NC_012121.1 (P76270) UPF0067 protein yebR,Similar to N-terminus of GAF domain protein [Staphylococcus epidermidis RP62A] (YP_188854); Hypothetical protein; GAF-domain-containing protein (fragment 1) 1339182 7550546 Sca_1324 Staphylococcus carnosus subsp. carnosus TM300 GAF-domain-containing protein (fragment 1) YP_002634414.1 1338808 D 396513 CDS YP_002634415.1 224476809 7550547 1339142..1339279 1 NC_012121.1 (P76270) UPF0067 protein yebR,Similar to C-terminus of GAF domain protein [Staphylococcus epidermidis RP62A] (YP_188854); Hypothetical protein; GAF-domain-containing protein (fragment 2) 1339279 7550547 Sca_1325 Staphylococcus carnosus subsp. carnosus TM300 GAF-domain-containing protein (fragment 2) YP_002634415.1 1339142 D 396513 CDS YP_002634416.1 224476810 7550548 1339529..1340134 1 NC_012121.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1340134 rpsD 7550548 rpsD Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S4 YP_002634416.1 1339529 D 396513 CDS YP_002634417.1 224476811 7552077 complement(1340452..1341201) 1 NC_012121.1 orf in full length conserved in staphylococci,similar to C terminus Glycerophosphoryl diester phosphodiesterase glpQ,(EC 3.1.4.46) Bacillus subtilis, 293AA, Expect = 4e-82, Identities = 79/255 (30%), Positives = 146/255 (57%), Gaps = 15/255 (5%) ,(P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase; Hypothetical protein; putative glycerophosphoryl diester phosphodiesterase 1341201 7552077 Sca_1327 Staphylococcus carnosus subsp. carnosus TM300 putative glycerophosphoryl diester phosphodiesterase YP_002634417.1 1340452 R 396513 CDS YP_002634418.1 224476812 7550549 1341273..1341713 1 NC_012121.1 low similarity to Organic hydroperoxide resistance protein ohrB (Bacillus subtilis),(P70736) Hypothetical 15.2 kDa protein in xcpR 3region (ORF2),InterPro: OsmC-like protein; Hypothetical protein; hypothetical protein 1341713 7550549 Sca_1328 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634418.1 1341273 D 396513 CDS YP_002634419.1 224476813 7550550 1341958..1343115 1 NC_012121.1 similar to soluble hydrogenase, small subunit, (EC 1.12.-.-), Synechococcus sp. (strain PCC 6716), 384AA,Expect = 1e-146, Identities = 140/383 (36%), Positives = 226/383 (59%), Gaps = 4/383 (1%) (P14776) Soluble hydrogenase small subunit (EC 1.12.-.-) (Tritium exchange subunit),InterPro: Aminotransferase class V; Hypothetical protein; putative soluble hydrogenase subunit 1343115 7550550 Sca_1329 Staphylococcus carnosus subsp. carnosus TM300 putative soluble hydrogenase subunit YP_002634419.1 1341958 D 396513 CDS YP_002634420.1 224476814 7550551 1343108..1344700 1 NC_012121.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1344700 serA 7550551 serA Staphylococcus carnosus subsp. carnosus TM300 D-3-phosphoglycerate dehydrogenase YP_002634420.1 1343108 D 396513 CDS YP_002634421.1 224476815 7552125 complement(1344752..1345873) 1 NC_012121.1 conserved in staphylococci,(Q9CKJ5) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGP); Hypothetical protein; hypothetical protein 1345873 7552125 Sca_1331 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634421.1 1344752 R 396513 CDS YP_002634422.1 224476816 7550552 complement(1345997..1347481) 1 NC_012121.1 full length conserved in staphylococci,,N terminal similar to PTS system, N-acetylglucosamine-specific IIABC component nagE,(EC 2.7.1.69) ,Escherichia coli, 648AA,Expect = 8e-87, Identities = 214/501 (42%), Positives = 301/501 (60%), Gaps = 53/501 (10%),(P09323) PTS system N-acetylglucosamine-specific IIABC component (EIIABC-Nag) (N-acetylglucosamine-permease IIABC component) (Phosphotransferase enzyme II ABC component) (EC 2.7.1.69) (EII-Nag),InterPro: Phosphotransferase system EIIC; Hypothetical protein; putative PTS system IIBC component 1347481 7550552 Sca_1332 Staphylococcus carnosus subsp. carnosus TM300 putative PTS system IIBC component YP_002634422.1 1345997 R 396513 CDS YP_002634423.1 224476817 7550553 complement(1347613..1348221) 1 NC_012121.1 (Q42670) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT),InterPro: Phospholipid/glycerol acyltransferase,1-acyl-sn-glycerol-3-phosphate acyltransferase; Hypothetical protein; hypothetical protein 1348221 7550553 Sca_1333 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634423.1 1347613 R 396513 CDS YP_002634424.1 224476818 7550554 1348426..1349616 1 NC_012121.1 ORF conserved in staphylococci.,C terminal similar to protease do [Precursor], (EC 3.4.21.-), ,degP,Escherichia coli, 474AA, Expect = 5e-44, Identities = 120/282 (42%), Positives = 170/282 (60%), Gaps = 18/282 (6%),(O34358) Probable serine protease do-like htrA (EC 3.4.21.-),InterPro: Peptidase S1 chymotrypsin family; Hypothetical protein; hypothetical protein 1349616 7550554 Sca_1334 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634424.1 1348426 D 396513 CDS YP_002634425.1 224476819 7550555 complement(1349686..1350948) 1 NC_012121.1 similar to tyrosyl-tRNA synthetase tyrS (EC 6.1.1.1), ,Bacillus stearothermophilus, 419AA, Expect = 0.0, Identities = 247/417 (59%), Positives = 313/417 (75%), Gaps = 1/417 (0%),(P00952) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS),InterPro: Tyrosyl-tRNA synthetase class Ib; Hypothetical protein; tyrosyl-tRNA synthetase 1350948 tyrS 7550555 tyrS Staphylococcus carnosus subsp. carnosus TM300 tyrosyl-tRNA synthetase YP_002634425.1 1349686 R 396513 CDS YP_002634426.1 224476820 7552276 1351323..1352228 1 NC_012121.1 Similar to N terminal parts of PBP1B (several bacteria). Maybe truncated ORF.,(P02918) Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)],InterPro: Glycosyl transferase family 51; Hypothetical protein; putative transglycosylase 1352228 sgtA 7552276 sgtA Staphylococcus carnosus subsp. carnosus TM300 putative transglycosylase YP_002634426.1 1351323 D 396513 CDS YP_002634427.1 224476821 7552128 complement(1352285..1353952) 1 NC_012121.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 1353952 fhs 7552128 fhs Staphylococcus carnosus subsp. carnosus TM300 formate--tetrahydrofolate ligase YP_002634427.1 1352285 R 396513 CDS YP_002634428.1 224476822 7551574 complement(1354346..1356058) 1 NC_012121.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1356058 acsA 7551574 acsA Staphylococcus carnosus subsp. carnosus TM300 acetyl-CoA synthetase YP_002634428.1 1354346 R 396513 CDS YP_002634429.1 224476823 7551365 1356290..1356922 1 NC_012121.1 similar to acetoin utilization protein acuA (EC 2.3.1.-),Bacillus subtilis, 210AA, Expect = 1e-122,Identities = 114/210 (54%), Positives = 144/210 (68%) ,(P39065) Acetoin utilization protein acuA (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; acetoin utilization protein 1356922 acuA 7551365 acuA Staphylococcus carnosus subsp. carnosus TM300 acetoin utilization protein YP_002634429.1 1356290 D 396513 CDS YP_002634430.1 224476824 7551367 1356935..1358089 1 NC_012121.1 similar to acetoin utilization protein acuC,Bacillus subtilis, 387AA, Expect = 1e-99, Identities = 166/368 (45%), Positives = 241/368 (65%), Gaps = 1/368 (0%),(Q8NW34) Acetoin utilization protein acuC,InterPro: Histone deacetylase family; Hypothetical protein; putative acetoin utilization protein 1358089 acuC 7551367 acuC Staphylococcus carnosus subsp. carnosus TM300 putative acetoin utilization protein YP_002634430.1 1356935 D 396513 CDS YP_002634431.1 224476825 7551368 complement(1358164..1359153) 1 NC_012121.1 High confidence in function and specificity; catabolite control protein A 1359153 ccpA 7551368 ccpA Staphylococcus carnosus subsp. carnosus TM300 catabolite control protein A YP_002634431.1 1358164 R 396513 CDS YP_002634432.1 224476826 7551462 complement(1359059..>1359154) 1 NC_012121.1 Hypothetical protein; catabolite control protein A >1359154 ccpA 7551462 ccpA Staphylococcus carnosus subsp. carnosus TM300 catabolite control protein A YP_002634432.1 1359059 R 396513 CDS YP_002634433.1 224476827 7551463 complement(1359438..1360526) 1 NC_012121.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase 1360526 aroA 7551463 aroA Staphylococcus carnosus subsp. carnosus TM300 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase YP_002634433.1 1359438 R 396513 CDS YP_002634434.1 224476828 7551418 complement(1360786..1362162) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1362162 7551418 Sca_1345 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634434.1 1360786 R 396513 CDS YP_002634435.1 224476829 7550556 complement(1362299..1362739) 1 NC_012121.1 (P40779) Hypothetical protein ytxG; Hypothetical protein; hypothetical protein 1362739 7550556 Sca_1346 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634435.1 1362299 R 396513 CDS YP_002634436.1 224476830 7550557 complement(1362810..1364123) 1 NC_012121.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1364123 murC 7550557 murC Staphylococcus carnosus subsp. carnosus TM300 UDP-N-acetylmuramate--L-alanine ligase YP_002634436.1 1362810 R 396513 CDS YP_002634437.1 224476831 7551821 complement(1364142..1367810) 1 NC_012121.1 C terminus is similar to DNA translocase ftsK,Synonym: DNA translocase SpoIIIE, Bacillus subtilis,787AA, Expect = 1e-123, Identities = 245/508 (48%),Positives = 350/508 (68%), Gaps = 13/508 (2%) ,(Q8R5S4) DNA translocase ftsK,InterPro: Cell divisionFtsK/SpoIIIE protein; Hypothetical protein; FtsK/SpoIIIE family protein 1367810 7551821 Sca_1348 Staphylococcus carnosus subsp. carnosus TM300 FtsK/SpoIIIE family protein YP_002634437.1 1364142 R 396513 CDS YP_002634438.1 224476832 7550558 complement(1367836..1368435) 1 NC_012121.1 (Q8EPH5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS),InterPro: t-RNA-binding region; Hypothetical protein; hypothetical protein 1368435 7550558 Sca_1349 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634438.1 1367836 R 396513 CDS YP_002634439.1 224476833 7550559 complement(1368451..1369329) 1 NC_012121.1 (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase subunit I); Hypothetical protein; hypothetical protein 1369329 7550559 Sca_1350 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634439.1 1368451 R 396513 CDS YP_002634440.1 224476834 7550560 complement(1369425..1369733) 1 NC_012121.1 (O14463) Thioredoxin (TR),InterPro: Thioredoxin domain 2; Hypothetical protein; putative thioredoxin 1369733 7550560 Sca_1351 Staphylococcus carnosus subsp. carnosus TM300 putative thioredoxin YP_002634440.1 1369425 R 396513 CDS YP_002634441.1 224476835 7550561 complement(1369755..1370831) 1 NC_012121.1 similar to Glutamyl-aminopeptidase pepA, (EC 3.4.11.7),,Lactococcus lactis (subsp. cremoris) (Streptococcus cremoris), 355AA, Expect = 1e-70,Identities = 142/355 (40%), Positives = 208/355 (58%),Gaps = 8/355 (2%),(Q48677) Glutamyl-aminopeptidase (EC 3.4.11.7),InterPro: Peptidase M42; Hypothetical protein; putative glutamyl-aminopeptidase 1370831 pepA 7550561 pepA Staphylococcus carnosus subsp. carnosus TM300 putative glutamyl-aminopeptidase YP_002634441.1 1369755 R 396513 CDS YP_002634442.1 224476836 7551924 1370916..1371227 1 NC_012121.1 conserved in staphylococci.,(Q9FIZ9) Putative aquaporin NIP4.1 (NOD26-like intrinsic protein 4.1); Hypothetical protein; hypothetical protein 1371227 7551924 Sca_1353 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634442.1 1370916 D 396513 CDS YP_002634443.1 224476837 7550562 complement(1371289..1372113) 1 NC_012121.1 Hypothetical protein; metallo-beta-lactamase superfamily protein 1372113 7550562 Sca_1354 Staphylococcus carnosus subsp. carnosus TM300 metallo-beta-lactamase superfamily protein YP_002634443.1 1371289 R 396513 CDS YP_002634444.1 224476838 7550563 complement(1372221..1372856) 1 NC_012121.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1372856 trmB 7550563 trmB Staphylococcus carnosus subsp. carnosus TM300 tRNA (guanine-N(7)-)-methyltransferase YP_002634444.1 1372221 R 396513 CDS YP_002634445.1 224476839 7550564 complement(1372870..1373358) 1 NC_012121.1 incomplete alignment to staphylococci conserved proteins,(P71392) LicA protein; Hypothetical protein; hypothetical protein 1373358 7550564 Sca_1356 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634445.1 1372870 R 396513 CDS YP_002634446.1 224476840 7550565 complement(1373995..1374849) 1 NC_012121.1 similar to D-alanine aminotransferase dat (EC 2.6.1.21), Bacillus sp. (strain YM-1), 283AA, Expect = 2e-74, Identities = 141/273 (51%), Positives = 182/273 (66%) ,(P54694) D-alanine aminotransferase (EC 2.6.1.21) (D-aspartate aminotransferase) (D-amino acid aminotransferase) (D-amino acid transaminase) (DAAT),InterPro: D-amino acid aminotransferase; Hypothetical protein; D-alanine aminotransferase 1374849 dat 7550565 dat Staphylococcus carnosus subsp. carnosus TM300 D-alanine aminotransferase YP_002634446.1 1373995 R 396513 CDS YP_002634447.1 224476841 7551515 complement(1374854..1376263) 1 NC_012121.1 divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV 1376263 pepV 7551515 pepV Staphylococcus carnosus subsp. carnosus TM300 dipeptidase PepV YP_002634447.1 1374854 R 396513 CDS YP_002634448.1 224476842 7551927 complement(1376469..1376891) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1376891 7551927 Sca_1359 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634448.1 1376469 R 396513 CDS YP_002634449.1 224476843 7550566 complement(1376910..1377605) 1 NC_012121.1 similar to ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70), rsuA, Escherichia coli, 231AA,Expect = 2e-82, Identities = 96/232 (41%), Positives = 144/232 (62%), Gaps = 5/232 (2%),(P33918) Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase Rsu; Hypothetical protein; RNA pseudouridine synthase 1377605 7550566 Sca_1360 Staphylococcus carnosus subsp. carnosus TM300 RNA pseudouridine synthase YP_002634449.1 1376910 R 396513 CDS YP_002634450.1 224476844 7550567 complement(1377605..1379239) 1 NC_012121.1 similar to Stage V sporulation protein B,spoVB,,Bacillus subtilis, 518 AA, Expect = 1e-128,Identities = 102/482 (21%), Positives = 208/482 (43%),Gaps = 32/482 (6%),and to Hypothetical protein yabM,Bacillus subtilis, 532 AA, Expect = 1e-118,Identities = 107/428 (25%), Positives = 203/428 (47%), Gaps = 23/428 (5%) ,(Q00758) Stage V sporulation protein B,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein; putative polysaccharide biosynthesis protein 1379239 7550567 Sca_1361 Staphylococcus carnosus subsp. carnosus TM300 putative polysaccharide biosynthesis protein YP_002634450.1 1377605 R 396513 CDS YP_002634451.1 224476845 7550568 1379562..1380776 1 NC_012121.1 (Q9Z4P0) Fumarate reductase flavoprotein subunit precursor (EC 1.3.99.1) (Iron(III)-induced flavocytochrome C3) (Ifc3),InterPro: HI0933-like protein; Hypothetical protein; hypothetical protein 1380776 7550568 Sca_1362 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634451.1 1379562 D 396513 CDS YP_002634452.1 224476846 7550569 complement(1380833..1381150) 1 NC_012121.1 (P54433) Hypothetical UPF0033 protein yrkF,InterPro: Rhodanese-like; Hypothetical protein; hypothetical protein 1381150 7550569 Sca_1363 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634452.1 1380833 R 396513 CDS YP_002634453.1 224476847 7550570 complement(1381171..1382643) 1 NC_012121.1 (Q8CNU8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS),InterPro: Aminoacyl-tRNA synthetase class Ia,Similar to C-terminus of leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] (BAB57922); Hypothetical protein; leucyl-tRNA synthetase (fragment 2) 1382643 leuS'' 7550570 leuS'' Staphylococcus carnosus subsp. carnosus TM300 leucyl-tRNA synthetase (fragment 2) YP_002634453.1 1381171 R 396513 CDS YP_002634454.1 224476848 7551747 complement(1382561..1383586) 1 NC_012121.1 (Q8CNU8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS),InterPro: Aminoacyl-tRNA synthetase class Ia,Similar to N-terminus of leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] (BAB57922); Hypothetical protein; leucyl-tRNA synthetase (fragment 1) 1383586 leuS' 7551747 leuS' Staphylococcus carnosus subsp. carnosus TM300 leucyl-tRNA synthetase (fragment 1) YP_002634454.1 1382561 R 396513 CDS YP_002634455.1 224476849 7551746 complement(1384081..1385259) 1 NC_012121.1 (P21191) Quinolone resistance protein norA,InterPro: Major facilitator superfamily; Hypothetical protein; hypothetical protein 1385259 7551746 Sca_1366 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634455.1 1384081 R 396513 CDS YP_002634456.1 224476850 7550571 1385528..1386484 1 NC_012121.1 (P45476) Hypothetical protein yhcC,InterPro: Conserved hypothetical protein 1212; Hypothetical protein; hypothetical protein 1386484 7550571 Sca_1367 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634456.1 1385528 D 396513 CDS YP_002634457.1 224476851 7550572 1386489..1387046 1 NC_012121.1 (O66128) Menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-),InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein; hypothetical protein 1387046 7550572 Sca_1368 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634457.1 1386489 D 396513 CDS YP_002634458.1 224476852 7550573 complement(1387109..1388065) 1 NC_012121.1 similar to L-lactate dehydrogenase ldh (EC 1.1.1.27), Staphylococcus epidermidis, 316AA, Expect = 1e-112, Identities = 209/309 (67%), Positives = 247/309 (79%),(Q8CMZ0) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH),InterPro: Lactate/malate dehydrogenase; Hypothetical protein; L-lactate dehydrogenase 1388065 ldh 7550573 ldh Staphylococcus carnosus subsp. carnosus TM300 L-lactate dehydrogenase YP_002634458.1 1387109 R 396513 CDS YP_002634459.1 224476853 7551740 complement(1388258..1389088) 1 NC_012121.1 similar to lysophospholipase [Bacillus halodurans C-125], 260AA, Expect = 5e-44, Identities = 93/262 (35%),Positives = 145/262 (55%), Gaps = 3/262,(1%),(O35678) Monoglyceride lipase (EC 3.1.1.23),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; putative lysophospholipase 1389088 7551740 Sca_1370 Staphylococcus carnosus subsp. carnosus TM300 putative lysophospholipase YP_002634459.1 1388258 R 396513 CDS YP_002634460.1 224476854 7550574 1389344..1390339 1 NC_012121.1 similar to proline dehydrogenase [Bacillus halodurans C-125], 319AA, 280AA aligned, Expect = 2e-26,Identities = 73/280 (26%), Positives = 144/280 (51%), Gaps = 13/280 (4%),only local similarity to ,(P95629) Bifunctional putA protein [Includes: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) (P5C dehydrogenase)],InterPro: Proline dehydrogenase; Hypothetical protein; hypothetical protein 1390339 7550574 Sca_1371 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634460.1 1389344 D 396513 CDS YP_002634461.1 224476855 7550575 complement(1390408..1390866) 1 NC_012121.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1390866 ribH 7550575 ribH Staphylococcus carnosus subsp. carnosus TM300 6,7-dimethyl-8-ribityllumazine synthase YP_002634461.1 1390408 R 396513 CDS YP_002634462.1 224476856 7552026 complement(1390899..1392086) 1 NC_012121.1 similar to Riboflavin biosynthesis protein ribA,(EC 3.5.4.25),,Bacillus subtilis, Expect = 1e-179, Identities = 214/396 (54%), Positives = 279/396 (70%), Gaps = 4/396 (1%),(P74104) Riboflavin biosynthesis protein ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 34-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)],InterPro: 34-Dihydroxy-2-butanone 4-phosphate synthase; Hypothetical protein; riboflavin biosynthesis protein 1392086 ribA 7552026 ribA Staphylococcus carnosus subsp. carnosus TM300 riboflavin biosynthesis protein YP_002634462.1 1390899 R 396513 CDS YP_002634463.1 224476857 7552021 complement(1392096..1392728) 1 NC_012121.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1392728 ribB 7552021 ribB Staphylococcus carnosus subsp. carnosus TM300 riboflavin synthase subunit alpha YP_002634463.1 1392096 R 396513 CDS YP_002634464.1 224476858 7552022 complement(1392735..1393784) 1 NC_012121.1 Riboflavin biosynthesis protein ribD (EC 3.5.4.26),,Bacillus subtilis, Expect = 7e-72, Identities = 148/353 (41%), Positives = 211/353 (59%), Gaps = 9/353 (2%), (P17618) Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)],InterPro: Riboflavin biosynthesis protein RibD; Hypothetical protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 1393784 ribD 7552022 ribD Staphylococcus carnosus subsp. carnosus TM300 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_002634464.1 1392735 R 396513 CDS YP_002634465.1 224476859 7552025 complement(1394190..1395671) 1 NC_012121.1 conserved in staphylococci,(P77148) Hypothetical protein ydhS; Hypothetical protein; hypothetical protein 1395671 7552025 Sca_1376 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634465.1 1394190 R 396513 CDS YP_002634466.1 224476860 7550576 complement(1395809..1396654) 1 NC_012121.1 (P52081) Bifunctional autolysin precursor [Includes: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28); Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (EC 3.2.1.96)],InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Hypothetical protein; hypothetical protein 1396654 7550576 Sca_1377 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634466.1 1395809 R 396513 CDS YP_002634467.1 224476861 7550577 complement(1396974..1397195) 1 NC_012121.1 conserved in staphylococci; Hypothetical protein; hypothetical protein 1397195 7550577 Sca_1378 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634467.1 1396974 R 396513 CDS YP_002634468.1 224476862 7550578 1397398..1398333 1 NC_012121.1 no Shine Dalgarno sequence,InterPro: Sigma-70 region 2; Hypothetical protein; hypothetical protein 1398333 7550578 Sca_1379 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634468.1 1397398 D 396513 CDS YP_002634469.1 224476863 7550579 complement(1398317..1398769) 1 NC_012121.1 conserved in staphylococci; Hypothetical protein; hypothetical protein 1398769 7550579 Sca_1380 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634469.1 1398317 R 396513 CDS YP_002634470.1 224476864 7550580 complement(1398897..1399613) 1 NC_012121.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 1399613 7550580 Sca_1381 Staphylococcus carnosus subsp. carnosus TM300 putative translaldolase YP_002634470.1 1398897 R 396513 CDS YP_002634471.1 224476865 7550581 1399798..1400103 1 NC_012121.1 conserved in staphylococci; Hypothetical protein; hypothetical protein 1400103 7550581 Sca_1382 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634471.1 1399798 D 396513 CDS YP_002634472.1 224476866 7550582 1400174..1400545 1 NC_012121.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1400545 7550582 Sca_1383 Staphylococcus carnosus subsp. carnosus TM300 camphor resistance protein CrcB YP_002634472.1 1400174 D 396513 CDS YP_002634473.1 224476867 7550583 1400550..1400894 1 NC_012121.1 conserved in staphylococci,(Q8CS28) Protein crcB homolog,InterPro: Camphor resistance CrcB protein; Hypothetical protein; hypothetical protein 1400894 7550583 Sca_1384 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634473.1 1400550 D 396513 CDS YP_002634474.1 224476868 7550584 complement(1400941..1401864) 1 NC_012121.1 similar to ADP-ribosyl-[dinitrogen reductase] glycohydrolase (EC 3.2.2.24) draG, Rhodospirillum rubrum,Expect = 5e-98, Identities = 90/304 (29%), Positives = 134/304 (44%), Gaps = 47/304 (15%),(P14300) ADP-ribosyl-[dinitrogen reductase] glycohydrolase (EC 3.2.2.24) (ADP-ribosylglycohydrolase) (Dinitrogenase reductase activating glycohydrolase),InterPro: ADP-ribosylglycohydrolase; Hypothetical protein; hypothetical protein 1401864 7550584 Sca_1385 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634474.1 1400941 R 396513 CDS YP_002634475.1 224476869 7550585 complement(1401875..1402717) 1 NC_012121.1 similar to plant metabolite dehydrogenase,(O60218) Aldo-keto reductase family 1 member B10 (EC 1.1.1.-) (Aldose reductase-like) (ARL-1) (Small intestine reductase) (SI reductase) (Aldose reductase-related protein) (ARP) (hARP),InterPro: Aldo/keto reductase; Hypothetical protein; hypothetical protein 1402717 7550585 Sca_1386 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634475.1 1401875 R 396513 CDS YP_002634476.1 224476870 7550586 1402915..>1403034 1 NC_012121.1 Similar to N-terminus (aa 5-40) of transposase for ISSha1 [Staphylococcus haemolyticus JCSC1435] (BAE03687): 438 aa; Hypothetical protein; transposase (fragment 1) >1403034 tnp' 7550586 tnp' Staphylococcus carnosus subsp. carnosus TM300 transposase (fragment 1) YP_002634476.1 1402915 D 396513 CDS YP_002634477.1 224476871 7552192 1403101..1404231 1 NC_012121.1 Similar to C-terminal part (aa 41-438) of transposase for ISSha1 [Staphylococcus haemolyticus JCSC1435](BAE03687): 438 aa ,(Q06126) Transposase for insertion sequence element IS1001,InterPro: Transposase IS204/IS1001/IS1096/IS1165; Hypothetical protein; transposase (fragment 2) 1404231 tnp'' 7552192 tnp'' Staphylococcus carnosus subsp. carnosus TM300 transposase (fragment 2) YP_002634477.1 1403101 D 396513 CDS YP_002634478.1 224476872 7552193 complement(1404331..1405236) 1 NC_012121.1 C terminal 250aa are similar to conserved proteins,(Q8CG48) Structural maintenance of chromosome 2-like 1 protein (Chromosome-associated protein E) (XCAP-E homolog) (FGF-inducible protein 16); Hypothetical protein; hypothetical protein 1405236 7552193 Sca_1388 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634478.1 1404331 R 396513 CDS YP_002634479.1 224476873 7550587 complement(1405328..1406524) 1 NC_012121.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1406524 metK 7550587 metK Staphylococcus carnosus subsp. carnosus TM300 S-adenosylmethionine synthetase YP_002634479.1 1405328 R 396513 CDS YP_002634480.1 224476874 7551780 1406911..1408503 1 NC_012121.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1408503 pckA 7551780 pckA Staphylococcus carnosus subsp. carnosus TM300 phosphoenolpyruvate carboxykinase YP_002634480.1 1406911 D 396513 CDS YP_002634481.1 224476875 7551911 complement(1408553..1409308) 1 NC_012121.1 (P39839) Probable peptidase yuxL (EC 3.4.21.-),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; hypothetical protein 1409308 7551911 Sca_1391 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634481.1 1408553 R 396513 CDS YP_002634482.1 224476876 7550588 complement(1409316..1409789) 1 NC_012121.1 (P32090) Mutator mutT protein (78-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (EC 3.6.1.-) (dGTP pyrophosphohydrolase),InterPro: NUDIX hydrolase; Hypothetical protein; hypothetical protein 1409789 7550588 Sca_1392 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634482.1 1409316 R 396513 CDS YP_002634483.1 224476877 7550589 1409878..1410132 1 NC_012121.1 (Q8CS22) Hypothetical UPF0161 protein SE1462,InterPro: Protein of unknown function DUF37; Hypothetical protein; hypothetical protein 1410132 7550589 Sca_1393 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634483.1 1409878 D 396513 CDS YP_002634484.1 224476878 7550590 complement(1410129..1411136) 1 NC_012121.1 similar to O-succinylbenzoate synthase (EC 4.2.1.-), ,menC, Bacillus subtilis 492AA, only 335AA aligned,Expect = 3e-25, Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 35/335 (10%),(O34514) O-succinylbenzoate synthase (EC 4.2.1.-) (OSB synthase) (OSBS) (4-(2-carboxyphenyl)-4-oxybutyric acid synthase) (O-succinylbenzoic acid synthase); Hypothetical protein; hypothetical protein 1411136 7550590 Sca_1394 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634484.1 1410129 R 396513 CDS YP_002634485.1 224476879 7550591 complement(1411140..1412528) 1 NC_012121.1 similar to O-succinylbenzoate--CoA ligase menE, (EC 6.2.1.26), ,Staphylococcus aureus, Expect = 1e-163,Identities = 299/490 (61%), Positives = 355/490 (72%),Gaps = 31/490 (6%), (Q8NVZ4) O-succinylbenzoate--CoA ligase (EC 6.2.1.26) (OSB-CoA synthetase) (O-succinylbenzoyl-CoA synthetase),InterPro: AMP-dependent synthetase and ligase; Hypothetical protein; O-succinylbenzoic acid--CoA ligase 1412528 menE 7550591 menE Staphylococcus carnosus subsp. carnosus TM300 O-succinylbenzoic acid--CoA ligase YP_002634485.1 1411140 R 396513 CDS YP_002634486.1 224476880 7551772 complement(1412644..1413366) 1 NC_012121.1 (P40798) Shuttle craft protein; Hypothetical protein; hypothetical protein 1413366 7551772 Sca_1396 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634486.1 1412644 R 396513 CDS YP_002634487.1 224476881 7550592 1413550..1414074 1 NC_012121.1 Hypothetical protein; hypothetical protein 1414074 7550592 Sca_1397 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634487.1 1413550 D 396513 CDS YP_002634488.1 224476882 7550593 1414342..1414980 1 NC_012121.1 (O14578) Citron protein (Rho-interacting serine/threonine kinase 21) (Fragment); Hypothetical protein; hypothetical protein 1414980 7550593 Sca_1398 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634488.1 1414342 D 396513 CDS YP_002634489.1 224476883 7552237 complement(1416219..1416842) 1 NC_012121.1 (P46326) Hypothetical protein yxbB,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein; hypothetical protein 1416842 7552237 Sca_1399 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634489.1 1416219 R 396513 CDS YP_002634490.1 224476884 7550595 complement(1417014..1417550) 1 NC_012121.1 (P39667) Hypothetical protein yrxA (ORF1),InterPro: 3H domain; Hypothetical protein; hypothetical protein 1417550 7550595 Sca_1400 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634490.1 1417014 R 396513 CDS YP_002634491.1 224476885 7550596 complement(1417537..1418640) 1 NC_012121.1 similar to Cysteine desulfurase nifS, (EC 2.8.1.7),Anabaena azollae 400AA, 379AA aligned, Expect = 1e-148 Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 13/379 (3%) ,(Q43884) Cysteine desulfurase (EC 2.8.1.7) (Nitrogenase metalloclusters biosynthesis protein nifS),InterPro: Aminotransferase class V; Hypothetical protein; putative Cysteine desulfurase/aminotransferase,class V 1418640 nifS 7550596 nifS Staphylococcus carnosus subsp. carnosus TM300 putative Cysteine desulfurase/aminotransferase,class V YP_002634491.1 1417537 R 396513 CDS YP_002634492.1 224476886 7551853 1418742..1420085 1 NC_012121.1 similar to L-aspartate oxidase nadB, (EC 1.4.3.16),Bacillus subtilis,,only 393AA aligned, Expect = 2e-68,Identities = 155/400 (38%), Positives = 220/400 (55%),Gaps = 15/400 (3%),(Q929Z2) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate synthetase B),InterPro: Fumarate reductase/succinate dehydrogenase flavoprotein N-terminal; Hypothetical protein; putative L-aspartate oxidase 1420085 nadB 7551853 nadB Staphylococcus carnosus subsp. carnosus TM300 putative L-aspartate oxidase YP_002634492.1 1418742 D 396513 CDS YP_002634493.1 224476887 7551839 1420266..1421099 1 NC_012121.1 Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]nadC,(EC 2.4.2.19), Bacillus subtilis,Expect = 1e-108, Identities = 128/276 (46%), Positives = 171/276 (61%),(P39666) Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) (General stress protein 70) (GSP70),InterPro: Nicotinate-nucleotide pyrophosphorylase; Hypothetical protein; nicotinate-nucleotide pyrophosphorylase-like protein 1421099 nadC 7551839 nadC Staphylococcus carnosus subsp. carnosus TM300 nicotinate-nucleotide pyrophosphorylase-like protein YP_002634493.1 1420266 D 396513 CDS YP_002634494.1 224476888 7551840 1421099..1422199 1 NC_012121.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1422199 nadA 7551840 nadA Staphylococcus carnosus subsp. carnosus TM300 quinolinate synthetase YP_002634494.1 1421099 D 396513 CDS YP_002634495.1 224476889 7551838 complement(1422268..1422825) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1422825 7551838 Sca_1405 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634495.1 1422268 R 396513 CDS YP_002634496.1 224476890 7550597 complement(1423045..1424445) 1 NC_012121.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 1424445 hemY 7550597 hemY Staphylococcus carnosus subsp. carnosus TM300 protoporphyrinogen oxidase YP_002634496.1 1423045 R 396513 CDS YP_002634497.1 224476891 7551687 complement(1424438..1425394) 1 NC_012121.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1425394 hemH 7551687 hemH Staphylococcus carnosus subsp. carnosus TM300 ferrochelatase YP_002634497.1 1424438 R 396513 CDS YP_002634498.1 224476892 7551683 complement(1425425..1426462) 1 NC_012121.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1426462 hemE 7551683 hemE Staphylococcus carnosus subsp. carnosus TM300 uroporphyrinogen decarboxylase YP_002634498.1 1425425 R 396513 CDS YP_002634499.1 224476893 7551682 1426771..1427274 1 NC_012121.1 similar to signal transduction protein (Staphylococcus aureus),(P38049) Hypothetical protein yhgC; Hypothetical protein; hypothetical protein 1427274 7551682 Sca_1409 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634499.1 1426771 D 396513 CDS YP_002634500.1 224476894 7550598 complement(1427336..1428562) 1 NC_012121.1 similar to Protein ecsB, Bacillus subtilis, Expect = 1e-132, Identities = 101/367 (27%), Positives = 178/367 (48%), Gaps = 12/367 (3%),(P55340) Protein ecsB; Hypothetical protein; putative ABC transporter ecsB 1428562 ecsB 7550598 ecsB Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ecsB YP_002634500.1 1427336 R 396513 CDS YP_002634501.1 224476895 7551546 complement(1428559..1429296) 1 NC_012121.1 similar to ABC-type transporter ATP-binding protein ecsA,Synonyms: prsT,Bacillus subtilis, Expect = 1e-79,Identities = 140/238 (58%), Positives = 182/238 (76%) ,(P55339) ABC-type transporter ATP-binding protein ecsA,InterPro: ABC transporter; Hypothetical protein; ABC transporter 1429296 ecsA 7551546 ecsA Staphylococcus carnosus subsp. carnosus TM300 ABC transporter YP_002634501.1 1428559 R 396513 CDS YP_002634502.1 224476896 7551545 1429433..1429858 1 NC_012121.1 (O07513) Hit protein,InterPro: Histidine triad (HIT) protein; Hypothetical protein; cell-cycle regulation Hit-like protein 1429858 hit 7551545 hit Staphylococcus carnosus subsp. carnosus TM300 cell-cycle regulation Hit-like protein YP_002634502.1 1429433 D 396513 CDS YP_002634503.1 224476897 7551699 1429928..1430404 1 NC_012121.1 (Q38694) Agamous-like MADS box protein AGL9 homolog (OM1); Hypothetical protein; hypothetical protein 1430404 7551699 Sca_1413 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634503.1 1429928 D 396513 CDS YP_002634504.1 224476898 7550599 1430634..1431200 1 NC_012121.1 (Q9PKE3) Inner membrane protein oxaA; Hypothetical protein; hypothetical protein 1431200 7550599 Sca_1414 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634504.1 1430634 D 396513 CDS YP_002634505.1 224476899 7550600 1431408..1432400 1 NC_012121.1 similar to Foldase protein prsA 1 [Precursor] prsA1 (EC 5.2.1.8), Bacillus anthracis, Expect = 2e-15,Identities = 96/297 (32%), Positives = 163/297 (54%), Gaps = 35/297 (11%),(P60747) Foldase protein prsA precursor (EC 5.2.1.8),InterPro: PpiC-type peptidyl-prolyl cis-trans isomerase; Hypothetical protein; putative foldase protein prsA 1 1432400 prsA1 7550600 prsA1 Staphylococcus carnosus subsp. carnosus TM300 putative foldase protein prsA 1 YP_002634505.1 1431408 D 396513 CDS YP_002634506.1 224476900 7551964 complement(1432478..1433419) 1 NC_012121.1 catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease YhaM 1433419 7551964 Sca_1416 Staphylococcus carnosus subsp. carnosus TM300 3'-5' exoribonuclease YhaM YP_002634506.1 1432478 R 396513 CDS YP_002634507.1 224476901 7550601 complement(1433419..1436352) 1 NC_012121.1 (Q9JMH9) Myosin XVIIIA (Myosin 18A) (Myosin containing PDZ domain); Hypothetical protein; hypothetical protein 1436352 7550601 Sca_1417 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634507.1 1433419 R 396513 CDS YP_002634508.1 224476902 7550602 complement(1436352..1437539) 1 NC_012121.1 (O26641) DNA double-strand break repair protein mre11,InterPro: Metallo-phosphoesterase; Hypothetical protein; hypothetical protein 1437539 7550602 Sca_1418 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634508.1 1436352 R 396513 CDS YP_002634509.1 224476903 7550603 complement(1437740..1438084) 1 NC_012121.1 (Q8CP17) Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Hypothetical protein; hypothetical protein 1438084 7550603 Sca_1419 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634509.1 1437740 R 396513 CDS YP_002634510.1 224476904 7550604 complement(1438242..1439372) 1 NC_012121.1 (P54794) Monoamine regulon transcriptional regulator,InterPro: Protein of unknown function DUF445; Hypothetical protein; hypothetical protein 1439372 7550604 Sca_1420 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634510.1 1438242 R 396513 CDS YP_002634511.1 224476905 7550605 complement(1439565..1440029) 1 NC_012121.1 (O27383) Putative HTH-type transcriptional regulator MTH1328,InterPro: Forkhead-associated (FHA); Hypothetical protein; hypothetical protein 1440029 7550605 Sca_1421 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634511.1 1439565 R 396513 CDS YP_002634512.1 224476906 7550606 complement(1440430..1441710) 1 NC_012121.1 (P58734) C4-dicarboxylate transport protein,InterPro: Sodium:dicarboxylate symporter; Hypothetical protein; putative proton/glutamate symporter family protein 1441710 7550606 Sca_1422 Staphylococcus carnosus subsp. carnosus TM300 putative proton/glutamate symporter family protein YP_002634512.1 1440430 R 396513 CDS YP_002634513.1 224476907 7550607 complement(1441859..1442488) 1 NC_012121.1 similar to two-component response regulator [Bacillus halodurans C-125],Expect = 8e-48,Identities = 91/210 (43%), Positives = 151/210 (71%), Gaps = 7/210 (3%),(P55184) Hypothetical sensory transduction protein yxjL,InterPro: Response regulator receiver; Hypothetical protein; putative two-component response regulator 1442488 7550607 Sca_1423 Staphylococcus carnosus subsp. carnosus TM300 putative two-component response regulator YP_002634513.1 1441859 R 396513 CDS YP_002634514.1 224476908 7550608 complement(1442494..1443618) 1 NC_012121.1 similar to Bacillus halodurans two-component sensor histidine kinase BH2214 TR:Q9KAS3, Expect = 9e-37,Identities = 90/260 (34%), Positives = 139/260 (53%), Gaps = 10/260 (3%),(P54663) Sensor protein degS (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; putative two-component sensor histidine kinase 1443618 7550608 Sca_1424 Staphylococcus carnosus subsp. carnosus TM300 putative two-component sensor histidine kinase YP_002634514.1 1442494 R 396513 CDS YP_002634515.1 224476909 7550609 1443756..1444583 1 NC_012121.1 similar to RNA pseudouridylate synthase (Staphylococcus aureus),(P54604) Hypothetical pseudouridine synthase yhcT (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase RluD; Hypothetical protein; hypothetical protein 1444583 7550609 Sca_1425 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634515.1 1443756 D 396513 CDS YP_002634516.1 224476910 7550610 complement(1444633..1446021) 1 NC_012121.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1446021 fumC 7550610 fumC Staphylococcus carnosus subsp. carnosus TM300 fumarate hydratase YP_002634516.1 1444633 R 396513 CDS YP_002634517.1 224476911 7551469 complement(1446195..1446611) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1446611 7551469 Sca_1427 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634517.1 1446195 R 396513 CDS YP_002634518.1 224476912 7550611 complement(1446757..1447356) 1 NC_012121.1 (O35000) Glucosamine-6-phosphate deaminase 1 (EC 3.5.99.6) (Glucosamine-6-phosphate isomerase 1) (GNPDA 1) (GlcN6P deaminase 1),InterPro: Glucosamine/galactosamine-6-phosphate isomerase; Hypothetical protein; hypothetical protein 1447356 7550611 Sca_1428 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634518.1 1446757 R 396513 CDS YP_002634519.1 224476913 7550612 complement(1447603..1448073) 1 NC_012121.1 (P32813) Hypothetical 18.2 kDa protein in gldA 3region (ORF3),InterPro: RNA methyltransferase TrmH group 2; Hypothetical protein; putative rRNA methylase 1448073 7550612 Sca_1429 Staphylococcus carnosus subsp. carnosus TM300 putative rRNA methylase YP_002634519.1 1447603 R 396513 CDS YP_002634520.1 224476914 7550613 complement(1448080..1449207) 1 NC_012121.1 (P32815) Hypothetical protein in gldA 3region (ORF5) (Fragment),InterPro: 4Fe-4S cluster binding; Hypothetical protein; hypothetical protein 1449207 7550613 Sca_1430 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634520.1 1448080 R 396513 CDS YP_002634521.1 224476915 7550614 complement(1449275..1450000) 1 NC_012121.1 similar to glutamine transport ATP-binding protein glnQ,,Bacillus stearothermophilus, Expect = 3e-81,Identities = 140/241 (58%), Positives = 177/241 (73%),(P27675) Glutamine transport ATP-binding protein glnQ,InterPro: ABC transporter; Hypothetical protein; glutamate ABC transporter ATP-binding protein 1450000 glnQ 7550614 glnQ Staphylococcus carnosus subsp. carnosus TM300 glutamate ABC transporter ATP-binding protein YP_002634521.1 1449275 R 396513 CDS YP_002634522.1 224476916 7551637 complement(1449993..1451468) 1 NC_012121.1 similar to glutamine-binding periplasmic protein Streptococcus pyogenes,(P54536) Probable amino-acid ABC transporter permease protein yqiY,InterPro: Bacterial extracellular solute-binding protein family 3; Hypothetical protein; hypothetical protein 1451468 7551637 Sca_1432 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634522.1 1449993 R 396513 CDS YP_002634523.1 224476917 7550615 complement(1451614..1452660) 1 NC_012121.1 similar to Treponema pallidum regulatory protein and to Streptococcus pyogenes probable regulatory protein ,InterPro: Phosphotransferase system EIIC; Hypothetical protein; hypothetical protein 1452660 7550615 Sca_1433 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634523.1 1451614 R 396513 CDS YP_002634524.1 224476918 7551345 complement(1460674..1461129) 1 NC_012121.1 similar to Peroxide operon regulator perR, Bacillus subtilis, Expect = 2e-54, Identities = 96/142 (67%),Positives = 121/142 (85%),(P71086) Peroxide operon regulator,InterPro: Ferric-uptake regulator; Hypothetical protein; transcription regulator Fur family 1461129 perR 7551345 perR Staphylococcus carnosus subsp. carnosus TM300 transcription regulator Fur family YP_002634524.1 1460674 R 396513 CDS YP_002634525.1 224476919 7551928 complement(1461224..1462174) 1 NC_012121.1 (Q58424) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein; hypothetical protein 1462174 7551928 Sca_1435 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634525.1 1461224 R 396513 CDS YP_002634526.1 224476920 7550617 complement(1462180..1462635) 1 NC_012121.1 similar to bacterioferritin comigratory protein bcp, Escherichia coli, Expect = 4e-26, Identities = 59/143 (41%), Positives = 83/143 (58%),(P44411) Bacterioferritin comigratory protein homolog,InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Hypothetical protein; putative bacterioferritin comigratory protein 1462635 7550617 Sca_1436 Staphylococcus carnosus subsp. carnosus TM300 putative bacterioferritin comigratory protein YP_002634526.1 1462180 R 396513 CDS YP_002634527.1 224476921 7550618 1462718..1464007 1 NC_012121.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 1464007 gsaB 7550618 gsaB Staphylococcus carnosus subsp. carnosus TM300 glutamate-1-semialdehyde aminotransferase YP_002634527.1 1462718 D 396513 CDS YP_002634528.1 224476922 7551668 1464117..1465217 1 NC_012121.1 (Q58791) Hypothetical protein MJ1396; Hypothetical protein; hypothetical protein 1465217 7551668 Sca_1438 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634528.1 1464117 D 396513 CDS YP_002634529.1 224476923 7550619 complement(1465265..1467001) 1 NC_012121.1 (P45861) Hypothetical ABC transporter ATP-binding protein ywjA,InterPro: ABC transporter transmembrane region; Hypothetical protein; ABC transporter ATP-binding protein 1467001 7550619 Sca_1439 Staphylococcus carnosus subsp. carnosus TM300 ABC transporter ATP-binding protein YP_002634529.1 1465265 R 396513 CDS YP_002634530.1 224476924 7550620 complement(1467174..1467719) 1 NC_012121.1 InterPro: Protein of unknown function DUF402; Hypothetical protein; hypothetical protein 1467719 7550620 Sca_1440 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634530.1 1467174 R 396513 CDS YP_002634531.1 224476925 7550621 complement(1467783..1468841) 1 NC_012121.1 similar to A/G-specific adenine glycosylase mutY (EC 3.2.2.-),Escherichia coli,Expect = 2e-49, Identities = 123/354 (34%), Positives = 182/354 (51%), Gaps = 20/354 (5%),(P17802) A/G-specific adenine glycosylase (EC 3.2.2.-),InterPro: A/G-specific adenine glycosylase MutY; Hypothetical protein; putative A/G-specific adenine glycosylase 1468841 7550621 Sca_1441 Staphylococcus carnosus subsp. carnosus TM300 putative A/G-specific adenine glycosylase YP_002634531.1 1467783 R 396513 CDS YP_002634532.1 224476926 7550622 1468946..1469929 1 NC_012121.1 InterPro: Predicted membrane-bound metal-dependent hydrolase; Hypothetical protein; hypothetical protein 1469929 7550622 Sca_1442 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634532.1 1468946 D 396513 CDS YP_002634533.1 224476927 7550623 complement(1469968..1470819) 1 NC_012121.1 (Q8K2X1) Potential phospholipid-transporting ATPase VD (EC 3.6.3.1) (ATPVD); Hypothetical protein; hypothetical protein 1470819 7550623 Sca_1443 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634533.1 1469968 R 396513 CDS YP_002634534.1 224476928 7550624 complement(1470830..1472356) 1 NC_012121.1 low similarity to teichoic acid export ATP-binding protein tagH (Bacillus subtilis, Expect = 8e-10,Identities = 82/439 (18%), Positives = 177/439 (40%), Gaps = 30/439 (6%)),(P42954) Teichoic acid export ATP-binding protein tagH (EC 3.6.3.40) (Teichoic acid-transporting ATPase),InterPro: ABC transporter; Hypothetical protein; hypothetical protein 1472356 7550624 Sca_1444 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634534.1 1470830 R 396513 CDS YP_002634535.1 224476929 7550625 complement(1472373..1472663) 1 NC_012121.1 (Q9UII4) Cyclin-E binding protein; Hypothetical protein; hypothetical protein 1472663 7550625 Sca_1445 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634535.1 1472373 R 396513 CDS YP_002634536.1 224476930 7550626 complement(1472680..1473483) 1 NC_012121.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1473483 recX 7550626 recX Staphylococcus carnosus subsp. carnosus TM300 recombination regulator RecX YP_002634536.1 1472680 R 396513 CDS YP_002634537.1 224476931 7550627 complement(1473664..1474476) 1 NC_012121.1 monofunctional; catalyzes the elongation of glycan strands in cell wall biosynthesis; glycosyltransferase 1474476 7550627 Sca_1447 Staphylococcus carnosus subsp. carnosus TM300 glycosyltransferase YP_002634537.1 1473664 R 396513 CDS YP_002634538.1 224476932 7550628 complement(1474669..1475196) 1 NC_012121.1 (Q53719) Hypothetical protein SAV1875/SA1692/MW1815 (ORF1),InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein; hypothetical protein 1475196 7550628 Sca_1448 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634538.1 1474669 R 396513 CDS YP_002634539.1 224476933 7550629 complement(1475321..1475494) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1475494 7550629 Sca_1449 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634539.1 1475321 R 396513 CDS YP_002634540.1 224476934 7550630 1475717..1476865 1 NC_012121.1 (P56414) Molybdenum cofactor biosynthesis protein A,InterPro: Radical SAM; Hypothetical protein; hypothetical protein 1476865 7550630 Sca_1450 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634540.1 1475717 D 396513 CDS YP_002634541.1 224476935 7550631 complement(1476916..1477437) 1 NC_012121.1 (Q9PJK7) Putative acyl-CoA thioester hydrolase TC0822 (EC 3.1.2.-),InterPro: Thioesterase superfamily; Hypothetical protein; hypothetical protein 1477437 7550631 Sca_1451 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634541.1 1476916 R 396513 CDS YP_002634542.1 224476936 7550632 complement(1477468..1478706) 1 NC_012121.1 similar to Aminopeptidase ampS (EC 3.4.11.-),Bacillus subtilis, Expect = 0.0, Identities = 205/412 (49%), Positives = 278/412 (67%), Gaps = 2/412 (0%),(P39762) Aminopeptidase ampS (EC 3.4.11.-),InterPro: Peptidase M29 thermophilic metalloprotease; Hypothetical protein; aminopeptidase ampS 1478706 ampS 7550632 ampS Staphylococcus carnosus subsp. carnosus TM300 aminopeptidase ampS YP_002634542.1 1477468 R 396513 CDS YP_002634543.1 224476937 7551394 complement(1478745..1478951) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1478951 7551394 Sca_1453 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634543.1 1478745 R 396513 CDS YP_002634544.1 224476938 7550633 1479187..1479651 1 NC_012121.1 similar to eucaryotic low molecular weight phosphotyrosine protein phosphatase (EC 3.1.3.48)(P81693),(Low molecular weight cytosolic acid phosphatase) (EC 3.1.3.2) (PTPase),InterPro: Low molecular weight phosphotyrosine protein phosphatase; Hypothetical protein; hypothetical protein 1479651 7550633 Sca_1454 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634544.1 1479187 D 396513 CDS YP_002634545.1 224476939 7550634 1479659..1479955 1 NC_012121.1 (P09922) Interferon-induced GTP-binding protein Mx1 (Influenza resistance protein); Hypothetical protein; hypothetical protein 1479955 7550634 Sca_1455 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634545.1 1479659 D 396513 CDS YP_002634546.1 224476940 7550635 1480074..1481150 1 NC_012121.1 (Q8DDS2) tRNA processing ribonuclease BN (EC 3.1.-.-) (RNase BN),InterPro: Ribonuclease BN; Hypothetical protein; hypothetical protein 1481150 7550635 Sca_1456 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634546.1 1480074 D 396513 CDS YP_002634547.1 224476941 7550636 1481360..1481938 1 NC_012121.1 similar to carbonic anhydrase, prokaryotic type,(Q10612) Hypothetical protein Rv1284/MT1322/Mb1315,InterPro: Carbonic anhydrase prokaryotic; Hypothetical protein; hypothetical protein 1481938 7550636 Sca_1457 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634547.1 1481360 D 396513 CDS YP_002634548.1 224476942 7550637 complement(1481988..1482605) 1 NC_012121.1 putative vancomycin resistance associated two-component regulator ,(Q51373) Response regulator gacA (Global activator),InterPro: Response regulator receiver; Hypothetical protein; putative response regulator 1482605 vraR 7550637 vraR Staphylococcus carnosus subsp. carnosus TM300 putative response regulator YP_002634548.1 1481988 R 396513 CDS YP_002634549.1 224476943 7552298 complement(1482607..1483650) 1 NC_012121.1 similar to vancomycin resistance associated two-component sensor histidine kinase (Staphylococcus aureus),(P27668) Sensor protein uhpB (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; histidine kinase sensor 1483650 vraS 7552298 vraS Staphylococcus carnosus subsp. carnosus TM300 histidine kinase sensor YP_002634549.1 1482607 R 396513 CDS YP_002634550.1 224476944 7552299 complement(1483647..1484348) 1 NC_012121.1 (P04540) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3); Hypothetical protein; hypothetical protein 1484348 7552299 Sca_1460 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634550.1 1483647 R 396513 CDS YP_002634551.1 224476945 7550638 complement(1484364..1484759) 1 NC_012121.1 (Q9RT21) Trigger factor (TF); Hypothetical protein; hypothetical protein 1484759 7550638 Sca_1461 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634551.1 1484364 R 396513 CDS YP_002634552.1 224476946 7550639 complement(1484893..1485660) 1 NC_012121.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1485660 map 7550639 map Staphylococcus carnosus subsp. carnosus TM300 methionine aminopeptidase YP_002634552.1 1484893 R 396513 CDS YP_002634553.1 224476947 7551768 1485912..1486898 1 NC_012121.1 only local similarity to: (P54538) Hypothetical protein yqjA; Hypothetical protein; hypothetical protein 1486898 7551768 Sca_1463 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634553.1 1485912 D 396513 CDS YP_002634554.1 224476948 7550640 complement(1486948..1487673) 1 NC_012121.1 (Q8Y7R3) Cobyric acid synthase; Hypothetical protein; hypothetical protein 1487673 7550640 Sca_1464 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634554.1 1486948 R 396513 CDS YP_002634555.1 224476949 7550641 complement(1487670..1488986) 1 NC_012121.1 similar to Mur ligase family protein,(Q9JSZ5) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid adding enzyme); Hypothetical protein; hypothetical protein 1488986 7550641 Sca_1465 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634555.1 1487670 R 396513 CDS YP_002634556.1 224476950 7550642 1489155..1489712 1 NC_012121.1 similar to putative DNA polymerase III, alpha chain PolC type (staphylococcus aureus),(Q8RA32) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII),InterPro: Exonuclease; Hypothetical protein; hypothetical protein 1489712 7550642 Sca_1466 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634556.1 1489155 D 396513 CDS YP_002634557.1 224476951 7550643 complement(1489748..1490818) 1 NC_012121.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1490818 dinP 7550643 dinP Staphylococcus carnosus subsp. carnosus TM300 DNA polymerase IV YP_002634557.1 1489748 R 396513 CDS YP_002634558.1 224476952 7551523 1491094..1491414 1 NC_012121.1 similar to Glucose starvation-inducible protein B gsiB, Bacillus subtilis, Expect = 2e-13, Identities = 60/99 (60%), Positives = 79/99 (79%),(P26907) Glucose starvation-inducible protein B (General stress protein B); Hypothetical protein; putative general stress protein 1491414 7551523 Sca_1468 Staphylococcus carnosus subsp. carnosus TM300 putative general stress protein YP_002634558.1 1491094 D 396513 CDS YP_002634559.1 224476953 7550644 complement(1491495..1492856) 1 NC_012121.1 similar to 23S rRNA (Uracil-5-)-methyltransferase rumA (EC 2.1.1.-),,23S rRNA(M-5-U1939)-methyltransferase,from Escherichia coli,,Expect = 1e-45,Identities = 136/448 (30%), Positives = 219/448 (48%),Gaps = 50/448 (11%),(Q9CJX3) 23S rRNA (Uracil-5-)-methyltransferase rumA (EC 2.1.1.-) (23S rRNA(M-5-U1939)-methyltransferase),InterPro: tRNA (uracil-5-)-methyltransferase/TrmA; Hypothetical protein; putative RNA methyltransferase 1492856 7550644 Sca_1469 Staphylococcus carnosus subsp. carnosus TM300 putative RNA methyltransferase YP_002634559.1 1491495 R 396513 CDS YP_002634560.1 224476954 7550645 complement(1492917..1493837) 1 NC_012121.1 similar to YegS from E. coli; putative lipid kinase 1493837 7550645 Sca_1470 Staphylococcus carnosus subsp. carnosus TM300 putative lipid kinase YP_002634560.1 1492917 R 396513 CDS YP_002634561.1 224476955 7550646 complement(1494088..1495515) 1 NC_012121.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1495515 gatB 7550646 gatB Staphylococcus carnosus subsp. carnosus TM300 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002634561.1 1494088 R 396513 CDS YP_002634562.1 224476956 7551612 complement(1495532..1496989) 1 NC_012121.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1496989 gatA 7551612 gatA Staphylococcus carnosus subsp. carnosus TM300 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002634562.1 1495532 R 396513 CDS YP_002634563.1 224476957 7551611 complement(1496989..1497291) 1 NC_012121.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1497291 gatC 7551611 gatC Staphylococcus carnosus subsp. carnosus TM300 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_002634563.1 1496989 R 396513 CDS YP_002634564.1 224476958 7551613 1497680..1499221 1 NC_012121.1 Hypothetical protein; high affinity proline permease 1499221 putP 7551613 putP Staphylococcus carnosus subsp. carnosus TM300 high affinity proline permease YP_002634564.1 1497680 D 396513 CDS YP_002634565.1 224476959 7551985 complement(1499284..1500321) 1 NC_012121.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase 1500321 7551985 Sca_1475 Staphylococcus carnosus subsp. carnosus TM300 formate dehydrogenase YP_002634565.1 1499284 R 396513 CDS YP_002634566.1 224476960 7550647 complement(1500493..1501695) 1 NC_012121.1 (P39850) Capsular polysaccharide biosynthesis protein capA; Hypothetical protein; hypothetical protein 1501695 7550647 Sca_1476 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634566.1 1500493 R 396513 CDS YP_002634567.1 224476961 7550648 complement(1501716..1503722) 1 NC_012121.1 DNA ligase ligA, (EC 6.5.1.2), Escherichia coli,,Expect = 1e-158, Identities = 302/668 (45%), Positives = 415/668 (62%), Gaps = 9/668 (1%),(O87703) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]),InterPro: NAD-dependent DNA ligase; Hypothetical protein; DNA ligase 1503722 lig 7550648 lig Staphylococcus carnosus subsp. carnosus TM300 DNA ligase YP_002634567.1 1501716 R 396513 CDS YP_002634568.1 224476962 7551750 complement(1503726..1505921) 1 NC_012121.1 ATP-dependent DNA helicase pcrA (EC 3.6.1.-),,Bacillus stearothermophilus,(Q99SY2) ATP-dependent DNA helicase pcrA (EC 3.6.1.-),InterPro: ATP-dependent DNA helicase PcrA; Hypothetical protein; ATP-dependent DNA helicase 1505921 pcrA 7551750 pcrA Staphylococcus carnosus subsp. carnosus TM300 ATP-dependent DNA helicase YP_002634568.1 1503726 R 396513 CDS YP_002634569.1 224476963 7551913 complement(1505922..1506611) 1 NC_012121.1 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase-like protein 1506611 pcrB 7551913 pcrB Staphylococcus carnosus subsp. carnosus TM300 geranylgeranylglyceryl phosphate synthase-like protein YP_002634569.1 1505922 R 396513 CDS YP_002634570.1 224476964 7551914 complement(1506734..1506844) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1506844 7551914 Sca_1480 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634570.1 1506734 R 396513 CDS YP_002634571.1 224476965 7550649 complement(1506828..1507130) 1 NC_012121.1 similar to putative DNA-binding protein Staphylococcus aureus; Hypothetical protein; hypothetical protein 1507130 7550649 Sca_1481 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634571.1 1506828 R 396513 CDS YP_002634572.1 224476966 7550650 complement(1507251..1508549) 1 NC_012121.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1508549 purB 7550650 purB Staphylococcus carnosus subsp. carnosus TM300 adenylosuccinate lyase YP_002634572.1 1507251 R 396513 CDS YP_002634573.1 224476967 7551972 complement(1508760..1508936) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1508936 7551972 Sca_1483 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634573.1 1508760 R 396513 CDS YP_002634574.1 224476968 7550651 complement(1508926..1509495) 1 NC_012121.1 (P61544) Hypothetical UPF0316 protein SA1727; Hypothetical protein; hypothetical protein 1509495 7550651 Sca_1484 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634574.1 1508926 R 396513 CDS YP_002634575.1 224476969 7550652 complement(1509556..1510389) 1 NC_012121.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1510389 nadE 7550652 nadE Staphylococcus carnosus subsp. carnosus TM300 NAD synthetase YP_002634575.1 1509556 R 396513 CDS YP_002634576.1 224476970 7551841 complement(1510391..1511860) 1 NC_012121.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1511860 7551841 Sca_1486 Staphylococcus carnosus subsp. carnosus TM300 nicotinate phosphoribosyltransferase YP_002634576.1 1510391 R 396513 CDS YP_002634577.1 224476971 7550653 1512109..1513182 1 NC_012121.1 Nitric oxide synthase oxygenase (EC 1.-.-.), NOSoxy-like protein,SANOS, Staphylococcus aureus,,Expect = 1e-141,Identities = 242/358 (67%), Positives = 288/358 (80%),Gaps = 2/358 (0%),(O54705) Nitric oxide synthase inducible (EC 1.14.13.39) (NOS type II) (Inducible NOS) (iNOS),InterPro: Nitric oxide synthase NOS; Hypothetical protein; nitric oxide synthase oxygenase 1513182 nos 7550653 nos Staphylococcus carnosus subsp. carnosus TM300 nitric oxide synthase oxygenase YP_002634577.1 1512109 D 396513 CDS YP_002634578.1 224476972 7551859 1513216..1514025 1 NC_012121.1 similar to putative prephenate dehydratase Staphylococcus aureus,Expect = 3e-86, Identities = 158/266 (59%), Positives = 202/266 (75%), Gaps = 2/266 (0%),(Q58054) Probable prephenate dehydratase (EC 4.2.1.51) (PDT),InterPro: Prephenate dehydratase with ACT region; Hypothetical protein; hypothetical protein 1514025 7551859 Sca_1488 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634578.1 1513216 D 396513 CDS YP_002634579.1 224476973 7550654 1514129..1516402 1 NC_012121.1 similar to daunorubicin resistance protein (drrC),L.monocytogenes_F2365 ,Expect = 0.0, Identities = 378/747 (50%), Positives = 517/747 (69%), Gaps = 8/747 (1%),similar to excinuclease ABC (subunit A),L.monocytogenes, ,Expect = 0.0,Identities = 377/747 (50%), Positives = 518/747 (69%), Gaps = 8/747 (1%),(Q56242) UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A),InterPro: ABC transporter; Hypothetical protein; putative daunorubicin resistance protein 1516402 drrC 7550654 drrC Staphylococcus carnosus subsp. carnosus TM300 putative daunorubicin resistance protein YP_002634579.1 1514129 D 396513 CDS YP_002634580.1 224476974 7551542 complement(1516462..1517838) 1 NC_012121.1 similar to probable aldehyde dehydrogenase,Bacillus subtilis,,Expect = 1e-129, Identities = 223/447 (49%), Positives = 308/447 (68%), Gaps = 2/447 (0%),(P39616) Probable aldehyde dehydrogenase ywdH (EC 1.2.1.3),InterPro: Aldehyde dehydrogenase; Hypothetical protein; putative aldehyde dehydrogenase 1517838 aldH 7551542 aldH Staphylococcus carnosus subsp. carnosus TM300 putative aldehyde dehydrogenase YP_002634580.1 1516462 R 396513 CDS YP_002634581.1 224476975 7551386 complement(1518081..1519007) 1 NC_012121.1 catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase 1519007 ppaC 7551386 ppaC Staphylococcus carnosus subsp. carnosus TM300 putative manganese-dependent inorganic pyrophosphatase YP_002634581.1 1518081 R 396513 CDS YP_002634582.1 224476976 7551952 complement(1519083..1519634) 1 NC_012121.1 (P37532) Hypothetical protein yaaI,InterPro: Isochorismatase hydrolase family; Hypothetical protein; hypothetical protein 1519634 7551952 Sca_1492 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634582.1 1519083 R 396513 CDS YP_002634583.1 224476977 7550655 1519770..1520882 1 NC_012121.1 (Q10325) Mst2 protein,InterPro: Parallel beta-helix repeat; Hypothetical protein; hypothetical protein 1520882 7550655 Sca_1493 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634583.1 1519770 D 396513 CDS YP_002634584.1 224476978 7550656 complement(1520935..1521030) 1 NC_012121.1 Similar to C-terminus of putative sodium:sulfate symporter [Staphylococcus aureus subsp. aureus MRSA252] (YP_041382); Hypothetical protein; hypothetical protein 1521030 7550656 Sca_1494 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634584.1 1520935 R 396513 CDS YP_002634585.1 224476979 7550657 complement(1521037..1522497) 1 NC_012121.1 (Q9ES88) Solute carrier family 13 member 2 (Renal sodium/dicarboxylate cotransporter) (Na(+)/dicarboxylate cotransporter 1) (NaDC-1),InterPro: Sodium/sulphate symporter,Similar to N-terminus of putative sodium:sulfate symporter [Staphylococcus aureus subsp. aureus MRSA252] (YP_041382); Hypothetical protein; hypothetical protein 1522497 7550657 Sca_1495 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634585.1 1521037 R 396513 CDS YP_002634586.1 224476980 7550658 complement(1522730..1523764) 1 NC_012121.1 (O86281) Hypothetical protein ywcC (ORFB); Hypothetical protein; hypothetical protein 1523764 7550658 Sca_1496 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634586.1 1522730 R 396513 CDS YP_002634587.1 224476981 7550659 1523936..1524340 1 NC_012121.1 (P54561) Hypothetical protein yqjX; Hypothetical protein; hypothetical protein 1524340 7550659 Sca_1497 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634587.1 1523936 D 396513 CDS YP_002634588.1 224476982 7550660 complement(1524388..1524627) 1 NC_012121.1 (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 intergenic region; Hypothetical protein; hypothetical protein 1524627 7550660 Sca_1498 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634588.1 1524388 R 396513 CDS YP_002634589.1 224476983 7550661 1525001..1526044 1 NC_012121.1 (Q44258) 1-carboxy-3-chloro-34-dihydroxycyclo hexa-15-diene dehydrogenase (EC 1.-.-.-); Hypothetical protein; hypothetical protein 1526044 7550661 Sca_1499 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634589.1 1525001 D 396513 CDS YP_002634590.1 224476984 7550662 complement(1526089..1526604) 1 NC_012121.1 (Q8K9Q5) Exoribonuclease II (EC 3.1.13.1) (Ribonuclease II) (RNase II); Hypothetical protein; hypothetical protein 1526604 7550662 Sca_1500 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634590.1 1526089 R 396513 CDS YP_002634591.1 224476985 7550663 complement(1526921..1527481) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1527481 7550663 Sca_1501 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634591.1 1526921 R 396513 CDS YP_002634592.1 224476986 7550664 complement(1527654..1528133) 1 NC_012121.1 (P49468) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit); Hypothetical protein; hypothetical protein 1528133 7550664 Sca_1502 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634592.1 1527654 R 396513 CDS YP_002634593.1 224476987 7550665 1528363..1528926 1 NC_012121.1 (Q96419) Thioredoxin H-type (TRX-H),InterPro: Thioredoxin domain 2; Hypothetical protein; hypothetical protein 1528926 7550665 Sca_1503 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634593.1 1528363 D 396513 CDS YP_002634594.1 224476988 7550666 complement(1528985..1529713) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1529713 7550666 Sca_1504 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634594.1 1528985 R 396513 CDS YP_002634595.1 224476989 7550667 complement(1529710..1530597) 1 NC_012121.1 (P72335) Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I),InterPro: ABC transporter; Hypothetical protein; hypothetical protein 1530597 7550667 Sca_1505 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634595.1 1529710 R 396513 CDS YP_002634596.1 224476990 7550668 complement(1530612..1531298) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1531298 7550668 Sca_1506 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634596.1 1530612 R 396513 CDS YP_002634597.1 224476991 7550669 complement(1531295..1532185) 1 NC_012121.1 (P46903) ATP-binding transport protein natA (Na(+) ABC transporter),InterPro: ABC transporter; Hypothetical protein; hypothetical protein 1532185 7550669 Sca_1507 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634597.1 1531295 R 396513 CDS YP_002634598.1 224476992 7550670 complement(1532182..1532562) 1 NC_012121.1 (P54590) Hypothetical transcriptional regulator yhcF,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein; hypothetical protein 1532562 7550670 Sca_1508 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634598.1 1532182 R 396513 CDS YP_002634599.1 224476993 7550671 1533133..1534428 1 NC_012121.1 similar to aspartate transaminase protein (staphylococcus epidermidis),(P00505) Aspartate aminotransferase mitochondrial precursor (EC 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase-2); Hypothetical protein; hypothetical protein 1534428 7550671 Sca_1509 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634599.1 1533133 D 396513 CDS YP_002634600.1 224476994 7550672 1534537..1534686 1 NC_012121.1 Hypothetical protein; hypothetical protein 1534686 7550672 Sca_1510 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634600.1 1534537 D 396513 CDS YP_002634601.1 224476995 7550673 1534670..1535968 1 NC_012121.1 similar to IgG-binding protein sbi (staphylococcus aureus),Expect = 3e-34, Identities = 125/456 (27%),Positives = 223/456 (48%), Gaps = 26/456 (5%),(Q99XA2) Immunoglobulin G binding protein A precursor (IgG binding protein A) (Staphylococcal protein A),InterPro: Ig-binding B; Hypothetical protein; putative IgG-binding protein 1535968 7550673 Sca_1511 Staphylococcus carnosus subsp. carnosus TM300 putative IgG-binding protein YP_002634601.1 1534670 D 396513 CDS YP_002634602.1 224476996 7550674 complement(1536030..1536323) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1536323 7550674 Sca_1512 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634602.1 1536030 R 396513 CDS YP_002634603.1 224476997 7550675 complement(1536393..1536851) 1 NC_012121.1 local similarity to:,(P31728) Probable D-methionine-binding lipoprotein metQ precursor (28 kDa outer membrane protein),InterPro: NLPA lipoprotein; Hypothetical protein; hypothetical protein 1536851 7550675 Sca_1513 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634603.1 1536393 R 396513 CDS YP_002634604.1 224476998 7550676 1537081..1538106 1 NC_012121.1 similar to low-specificity L-threonine aldolase ltaE (EC 4.1.2.5),,Pseudomonas sp. (strain NCIMB 10558),Expect = 1e-143, Identities = 99/346 (28%),Positives = 155/346 (44%), Gaps = 21/346 (6%), (O50584) Low-specificity L-threonine aldolase (EC 4.1.2.5) (Low-specificity L-TA); Hypothetical protein; putative L-threonine aldolase 1538106 ltaE 7550676 ltaE Staphylococcus carnosus subsp. carnosus TM300 putative L-threonine aldolase YP_002634604.1 1537081 D 396513 CDS YP_002634605.1 224476999 7551758 complement(1538982..1539701) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1539701 7551758 Sca_1515 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634605.1 1538982 R 396513 CDS YP_002634606.1 224477000 7550677 1540295..1540873 1 NC_012121.1 Hypothetical protein; hypothetical protein 1540873 7550677 Sca_1516 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634606.1 1540295 D 396513 CDS YP_002634607.1 224477001 7550678 complement(1540924..1541217) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1541217 7550678 Sca_1517 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634607.1 1540924 R 396513 CDS YP_002634608.1 224477002 7550679 complement(1541338..1541529) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1541529 7550679 Sca_1518 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634608.1 1541338 R 396513 CDS YP_002634609.1 224477003 7550680 complement(1541578..1542306) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1542306 7550680 Sca_1519 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634609.1 1541578 R 396513 CDS YP_002634610.1 224477004 7550681 complement(1542387..1542935) 1 NC_012121.1 (Q9PRB3) Hypothetical protein UU032; Hypothetical protein; hypothetical protein 1542935 7550681 Sca_1520 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634610.1 1542387 R 396513 CDS YP_002634611.1 224477005 7550682 complement(1542935..1543390) 1 NC_012121.1 Hypothetical protein; putative phage-associated protein 1543390 7550682 Sca_1521 Staphylococcus carnosus subsp. carnosus TM300 putative phage-associated protein YP_002634611.1 1542935 R 396513 CDS YP_002634612.1 224477006 7550683 complement(1543512..1543850) 1 NC_012121.1 (Q10367) Hypothetical protein C22E12.17c in chromosome I,InterPro: Bacterial regulatory protein LuxR family; Hypothetical protein; hypothetical protein 1543850 7550683 Sca_1522 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634612.1 1543512 R 396513 CDS YP_002634613.1 224477007 7550684 complement(1543847..1544161) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1544161 7550684 Sca_1523 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634613.1 1543847 R 396513 CDS YP_002634614.1 224477008 7550685 complement(1544454..1544990) 1 NC_012121.1 (O73683) Alzheimers disease amyloid A4 protein homolog precursor [Contains: Beta-amyloid protein (Beta-APP) (A-beta)]; Hypothetical protein; hypothetical protein 1544990 7550685 Sca_1524 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634614.1 1544454 R 396513 CDS YP_002634615.1 224477009 7550686 complement(1545018..1545494) 1 NC_012121.1 (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE),InterPro: Phage terminase small subunit putative P27 family; Hypothetical protein; hypothetical protein 1545494 7550686 Sca_1525 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634615.1 1545018 R 396513 CDS YP_002634616.1 224477010 7550687 1546086..1546178 1 NC_012121.1 Hypothetical protein; hypothetical protein 1546178 7550687 Sca_1526 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634616.1 1546086 D 396513 CDS YP_002634617.1 224477011 7550688 complement(1547022..1547480) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1547480 7550688 Sca_1527 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634617.1 1547022 R 396513 CDS YP_002634618.1 224477012 7550689 complement(1547493..1548128) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1548128 7550689 Sca_1528 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634618.1 1547493 R 396513 CDS YP_002634619.1 224477013 7550690 complement(1548322..1548786) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1548786 7550690 Sca_1529 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634619.1 1548322 R 396513 CDS YP_002634620.1 224477014 7550691 complement(1549298..1550818) 1 NC_012121.1 (P10277) Putative P4-specific DNA primase (EC 2.7.7.-),InterPro: Poxvirus D5 protein; Hypothetical protein; hypothetical protein 1550818 7550691 Sca_1530 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634620.1 1549298 R 396513 CDS YP_002634621.1 224477015 7550692 complement(1550831..1551718) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1551718 7550692 Sca_1531 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634621.1 1550831 R 396513 CDS YP_002634622.1 224477016 7550693 complement(1551821..1552135) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1552135 7550693 Sca_1532 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634622.1 1551821 R 396513 CDS YP_002634623.1 224477017 7550694 complement(1552137..1552232) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1552232 7550694 Sca_1533 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634623.1 1552137 R 396513 CDS YP_002634624.1 224477018 7550695 complement(1552311..1552613) 1 NC_012121.1 (P71561) ATP-dependent DNA helicase pcrA (EC 3.6.1.-); Hypothetical protein; hypothetical protein 1552613 7550695 Sca_1534 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634624.1 1552311 R 396513 CDS YP_002634625.1 224477019 7550696 complement(1552614..1553243) 1 NC_012121.1 (P44189) Hypothetical protein HI1418,InterPro: BRO family N-terminal; Hypothetical protein; hypothetical protein 1553243 7550696 Sca_1535 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634625.1 1552614 R 396513 CDS YP_002634626.1 224477020 7550697 complement(1553247..1553459) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1553459 7550697 Sca_1536 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634626.1 1553247 R 396513 CDS YP_002634627.1 224477021 7550698 1553632..1553751 1 NC_012121.1 (Q9RPQ3) Histidine biosynthesis bifunctional protein hisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)]; Hypothetical protein; hypothetical protein 1553751 7550698 Sca_1537 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634627.1 1553632 D 396513 CDS YP_002634628.1 224477022 7550699 1553780..1554265 1 NC_012121.1 Hypothetical protein; hypothetical protein 1554265 7550699 Sca_1538 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634628.1 1553780 D 396513 CDS YP_002634629.1 224477023 7550700 1554274..1555446 1 NC_012121.1 (Q9CI63) Prophage ps2 probable integrase (Int-TnX),InterPro: Phage integrase; Hypothetical protein; putative integrase 1555446 7550700 Sca_1539 Staphylococcus carnosus subsp. carnosus TM300 putative integrase YP_002634629.1 1554274 D 396513 CDS YP_002634630.1 224477024 7550701 complement(1555515..1557137) 1 NC_012121.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1557137 groEL 7550701 groEL Staphylococcus carnosus subsp. carnosus TM300 chaperonin GroEL YP_002634630.1 1555515 R 396513 CDS YP_002634631.1 224477025 7551665 complement(1557179..1557463) 1 NC_012121.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1557463 groES 7551665 groES Staphylococcus carnosus subsp. carnosus TM300 co-chaperonin GroES YP_002634631.1 1557179 R 396513 CDS YP_002634632.1 224477026 7551666 1557682..1558428 1 NC_012121.1 (Q9CDG9) Hypothetical UPF0177 protein yxdF,InterPro: Abortive infection protein; Hypothetical protein; hypothetical protein 1558428 7551666 Sca_1542 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634632.1 1557682 D 396513 CDS YP_002634633.1 224477027 7550702 complement(1558518..1560371) 1 NC_012121.1 (Q8T5T1) Midasin (MIDAS-containing protein); Hypothetical protein; serine-aspartate repeat family protein 1560371 7550702 Sca_1543 Staphylococcus carnosus subsp. carnosus TM300 serine-aspartate repeat family protein YP_002634633.1 1558518 R 396513 CDS YP_002634634.1 224477028 7550703 1560595..1561395 1 NC_012121.1 (P55177) Hypothetical UPF0012 protein in agr operon (ORF 5),InterPro: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Hypothetical protein; hypothetical protein 1561395 7550703 Sca_1544 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634634.1 1560595 D 396513 CDS YP_002634635.1 224477029 7550704 1562286..1562861 1 NC_012121.1 accessory gene regulator B 1562861 agrB 7550704 agrB Staphylococcus carnosus subsp. carnosus TM300 accessory gene regulator B YP_002634635.1 1562286 D 396513 CDS YP_002634636.1 224477030 7551376 1562870..1563007 1 NC_012121.1 Hypothetical protein; AgrD protein 1563007 agrD 7551376 agrD Staphylococcus carnosus subsp. carnosus TM300 AgrD protein YP_002634636.1 1562870 D 396513 CDS YP_002634637.1 224477031 7551379 1563039..1563827 1 NC_012121.1 (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit (Voltage-gated calcium channel alpha subunit Cav2.3) (Calcium channel L type alpha-1 polypeptide isoform 6) (Brain calcium channel II) (BII),Length of gene product similar to AgrC of S. simulans and S. carnosus. AgrC of S. aureus and S. lugdunensis are longer. Adjacent ORF codes for a putative protein similar to the C-terminal part of the larger homologues: probably truncated; Hypothetical protein; autoinducer sensor protein AgrC, probably truncated 1563827 agrC 7551379 agrC Staphylococcus carnosus subsp. carnosus TM300 autoinducer sensor protein AgrC, probably truncated YP_002634637.1 1563039 D 396513 CDS YP_002634638.1 224477032 7551377 1563831..1564334 1 NC_012121.1 similar to C-terminal part of receptor histidine kinase [Staphylococcus aureus]- AgrC (AAG03057),O34427) Sensor protein citS (EC 2.7.3.-),InterPro: ATP-binding region ATPase-like; Hypothetical protein; hypothetical protein 1564334 agrC'' 7551377 agrC'' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634638.1 1563831 D 396513 CDS YP_002634639.1 224477033 7551378 1564339..1565055 1 NC_012121.1 Hypothetical protein; Accessory gene regulator protein A 1565055 agrA 7551378 agrA Staphylococcus carnosus subsp. carnosus TM300 Accessory gene regulator protein A YP_002634639.1 1564339 D 396513 CDS YP_002634640.1 224477034 7551375 complement(1565102..1566574) 1 NC_012121.1 similar to Sucrose-6-phosphate hydrolase scrB (EC 3.2.1.26),,Staphylococcus xylosus, Expect = 1e-134,Identities = 242/490 (49%), Positives = 327/490 (66%),Gaps = 9/490 (1%),(Q05936) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase) (Invertase),InterPro: Sucrose-6-phosphate hydrolase; Hypothetical protein; sucrose-6-phosphate hydrolase 1566574 scrB 7551375 scrB Staphylococcus carnosus subsp. carnosus TM300 sucrose-6-phosphate hydrolase YP_002634640.1 1565102 R 396513 CDS YP_002634641.1 224477035 7552114 1566786..1567871 1 NC_012121.1 (P33015) Hypothetical protein yeeE,InterPro: YeeE/YedE; Hypothetical protein; hypothetical protein 1567871 7552114 Sca_1551 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634641.1 1566786 D 396513 CDS YP_002634642.1 224477036 7550705 1567898..1568122 1 NC_012121.1 (P33014) Hypothetical UPF0033 protein yeeD,InterPro: Protein of unknown function UPF0033; Hypothetical protein; hypothetical protein 1568122 7550705 Sca_1552 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634642.1 1567898 D 396513 CDS YP_002634643.1 224477037 7550706 complement(1568172..1568816) 1 NC_012121.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 1568816 7550706 Sca_1553 Staphylococcus carnosus subsp. carnosus TM300 redox-sensing transcriptional repressor Rex YP_002634643.1 1568172 R 396513 CDS YP_002634644.1 224477038 7550707 1569413..1571341 1 NC_012121.1 (O05519) Hypothetical ABC transporter ATP-binding protein ydiF,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 1571341 7550707 Sca_1554 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002634644.1 1569413 D 396513 CDS YP_002634645.1 224477039 7550708 complement(1571689..1572720) 1 NC_012121.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1572720 gcp 7550708 gcp Staphylococcus carnosus subsp. carnosus TM300 putative DNA-binding/iron metalloprotein/AP endonuclease YP_002634645.1 1571689 R 396513 CDS YP_002634646.1 224477040 7551616 complement(1572717..1573184) 1 NC_012121.1 putative acetyltransferase,(P41227) N-terminal acetyltransferase complex ARD1 subunit homolog (EC 2.3.1.-),InterPro: Ribosomal-protein-alanine acetyltransferase; Hypothetical protein; hypothetical protein 1573184 7551616 Sca_1556 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634646.1 1572717 R 396513 CDS YP_002634647.1 224477041 7550709 complement(1573160..1573816) 1 NC_012121.1 (P76256) Hypothetical protease yeaZ (EC 3.4.-.-),InterPro: Peptidase M22 glycoprotease metalloprotease; Hypothetical protein; hypothetical protein 1573816 7550709 Sca_1557 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634647.1 1573160 R 396513 CDS YP_002634648.1 224477042 7550710 complement(1573794..1574267) 1 NC_012121.1 (O05515) Hypothetical UPF0079 protein ydiB,InterPro: Protein of unknown function UPF0079; Hypothetical protein; hypothetical protein 1574267 7550710 Sca_1558 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634648.1 1573794 R 396513 CDS YP_002634649.1 224477043 7550711 1574732..1576426 1 NC_012121.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1576426 ilvD 7550711 ilvD Staphylococcus carnosus subsp. carnosus TM300 dihydroxy-acid dehydratase YP_002634649.1 1574732 D 396513 CDS YP_002634650.1 224477044 7551717 1576433..1578193 1 NC_012121.1 similar to Acetolactate synthase large subunit ilvB (EC 2.2.1.6),,Bacillus subtilis, Expect = 0.0, Identities = 314/572 (54%), Positives = 415/572 (72%), Gaps = 2/572 (0%),(P37251) Acetolactate synthase large subunit (EC 2.2.1.6) (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS) (Vegetative protein 105) (VEG105),InterPro: Acetolactate synthase large subunit biosynthetic type; Hypothetical protein; acetolactate synthase large subunit 1578193 ilvB 7551717 ilvB Staphylococcus carnosus subsp. carnosus TM300 acetolactate synthase large subunit YP_002634650.1 1576433 D 396513 CDS YP_002634651.1 224477045 7551715 1578190..1578663 1 NC_012121.1 similar to Acetolactate synthase small subunit ilvH (EC 2.2.1.6),Synechocystis sp. (strain PCC 6803), Expect = 1e-49,Identities = 55/159 (34%), Positives = 86/159 (54%),Gaps = 6/159 (3%),(Q55141) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS),InterPro: Acetolactate synthase small subunit; Hypothetical protein; putative acetolactate synthase small (regulatory) subunit 1578663 ilvH 7551715 ilvH Staphylococcus carnosus subsp. carnosus TM300 putative acetolactate synthase small (regulatory) subunit YP_002634651.1 1578190 D 396513 CDS YP_002634652.1 224477046 7551719 1578720..1579724 1 NC_012121.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1579724 ilvC 7551719 ilvC Staphylococcus carnosus subsp. carnosus TM300 ketol-acid reductoisomerase YP_002634652.1 1578720 D 396513 CDS YP_002634653.1 224477047 7551716 1579750..1581282 1 NC_012121.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 1581282 leuA 7551716 leuA Staphylococcus carnosus subsp. carnosus TM300 2-isopropylmalate synthase YP_002634653.1 1579750 D 396513 CDS YP_002634654.1 224477048 7551742 1581279..1582319 1 NC_012121.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1582319 leuB 7551742 leuB Staphylococcus carnosus subsp. carnosus TM300 3-isopropylmalate dehydrogenase YP_002634654.1 1581279 D 396513 CDS YP_002634655.1 224477049 7551743 1582335..1583717 1 NC_012121.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1583717 leuC 7551743 leuC Staphylococcus carnosus subsp. carnosus TM300 isopropylmalate isomerase large subunit YP_002634655.1 1582335 D 396513 CDS YP_002634656.1 224477050 7551744 1583710..1584285 1 NC_012121.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1584285 leuD 7551744 leuD Staphylococcus carnosus subsp. carnosus TM300 isopropylmalate isomerase small subunit YP_002634656.1 1583710 D 396513 CDS YP_002634657.1 224477051 7551745 1584304..1585572 1 NC_012121.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 1585572 ilvA 7551745 ilvA Staphylococcus carnosus subsp. carnosus TM300 threonine dehydratase YP_002634657.1 1584304 D 396513 CDS YP_002634658.1 224477052 7552230 complement(1591129..1591584) 1 NC_012121.1 (Q99SJ0) Protein sprT-like,InterPro: Putative metallopeptidase (SprT family),SprT; Hypothetical protein; hypothetical protein 1591584 7552230 Sca_1568 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634658.1 1591129 R 396513 CDS YP_002634659.1 224477053 7550712 complement(1591592..1593742) 1 NC_012121.1 similar to several transcriptional regulatory proteins,(P57072) Hypothetical protein NMA0194,InterPro: Ribonuclease RNase H fold containing; Conserved hypothetical protein; hypothetical protein 1593742 7550712 Sca_1569 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634659.1 1591592 R 396513 CDS YP_002634660.1 224477054 7550713 complement(1593851..1594621) 1 NC_012121.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB 1594621 sigB 7550713 sigB Staphylococcus carnosus subsp. carnosus TM300 RNA polymerase sigma factor SigB YP_002634660.1 1593851 R 396513 CDS YP_002634661.1 224477055 7552130 complement(1594596..1595075) 1 NC_012121.1 binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW 1595075 rsbW 7552130 rsbW Staphylococcus carnosus subsp. carnosus TM300 serine-protein kinase RsbW YP_002634661.1 1594596 R 396513 CDS YP_002634662.1 224477056 7552098 complement(1595077..1595403) 1 NC_012121.1 similar to Anti-sigma-B factor antagonist rsbV,,Bacillus subtilis, Expect = 4e-18, Identities = 43/106 (40%), Positives = 73/106 (68%), Gaps = 1/106 (0%),(P60071) Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor),InterPro: Anti-sigma factor antagonist; Hypothetical protein; putative anti-sigmaB factor antagonist 1595403 rsbV 7552098 rsbV Staphylococcus carnosus subsp. carnosus TM300 putative anti-sigmaB factor antagonist YP_002634662.1 1595077 R 396513 CDS YP_002634663.1 224477057 7552097 complement(1595479..1596480) 1 NC_012121.1 similar to Sigma factor sigB regulation protein rsbU (EC 3.1.3.3),Bacillus subtilis, Expect = 1e-147,Identities = 126/332 (37%), Positives = 207/332 (62%),Gaps = 5/332 (1%),(P40399) Phosphoserine phosphatase rsbU (EC 3.1.3.3) (Sigma factor sigB regulation protein rsbU),InterPro: Protein phosphatase 2C-like; Hypothetical protein; putative sigmaB regulation protein RsbU 1596480 rsbU 7552097 rsbU Staphylococcus carnosus subsp. carnosus TM300 putative sigmaB regulation protein RsbU YP_002634663.1 1595479 R 396513 CDS YP_002634664.1 224477058 7552096 complement(1596824..1597171) 1 NC_012121.1 (P13976) Protein pemK,InterPro: PemK-like protein; Hypothetical protein; hypothetical protein 1597171 7552096 Sca_1574 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634664.1 1596824 R 396513 CDS YP_002634665.1 224477059 7550714 complement(1597171..1597338) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1597338 7550714 Sca_1575 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634665.1 1597171 R 396513 CDS YP_002634666.1 224477060 7550715 complement(1597419..1598573) 1 NC_012121.1 similar to Alanine racemase (alr), Staphylococcus aureus,,Expect = 1e-149, Identities = 216/384 (56%),Positives = 276/384 (71%), Gaps = 2/384 (0%),(Q9ZAH5) Alanine racemase 1 (EC 5.1.1.1),InterPro: Alanine racemase; Hypothetical protein; alanine racemase 1598573 alr 7550715 alr Staphylococcus carnosus subsp. carnosus TM300 alanine racemase YP_002634666.1 1597419 R 396513 CDS YP_002634667.1 224477061 7551391 complement(1598637..1598990) 1 NC_012121.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1598990 acpS 7551391 acpS Staphylococcus carnosus subsp. carnosus TM300 4'-phosphopantetheinyl transferase YP_002634667.1 1598637 R 396513 CDS YP_002634668.1 224477062 7551364 complement(1598992..1599477) 1 NC_012121.1 (P53154) Glycerol uptake protein,InterPro: Bacterial membrane flanked domain; Hypothetical protein; hypothetical protein 1599477 7551364 Sca_1578 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634668.1 1598992 R 396513 CDS YP_002634669.1 224477063 7550716 complement(1599482..1600969) 1 NC_012121.1 InterPro: Bacterial membrane flanked domain; Hypothetical protein; hypothetical protein 1600969 7550716 Sca_1579 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634669.1 1599482 R 396513 CDS YP_002634670.1 224477064 7550717 complement(1600962..1601432) 1 NC_012121.1 InterPro: Bacterial membrane flanked domain; Hypothetical protein; hypothetical protein 1601432 7550717 Sca_1580 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634670.1 1600962 R 396513 CDS YP_002634671.1 224477065 7550718 complement(1601592..1603115) 1 NC_012121.1 similar to cold-shock DEAD-box protein A, Synonym ATP-dependent RNA helicase deaD, Escherichia coli, Expect = 1e-88,Identities = 183/428 (42%), Positives = 270/428 (63%), Gaps = 7/428 (1%),(P35599) Probable RNA helicase exp9 (Exported protein 9),InterPro: DEAD/DEAH box helicase; Hypothetical protein; putative helicase 1603115 7550718 Sca_1581 Staphylococcus carnosus subsp. carnosus TM300 putative helicase YP_002634671.1 1601592 R 396513 CDS YP_002634672.1 224477066 7550719 complement(1603455..1604819) 1 NC_012121.1 similar to UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase murF, (EC 6.3.2.10), Escherichia coli, Expect = 4e-48, Identities = 148/459 (32%),Positives = 237/459 (51%), Gaps = 16/459 (3%),(P96613) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme),InterPro: UDP-N-acetylmuramoylalanyl-D-glutamyl-26-diaminopimelate-D -alanyl-D-alanyl ligase; Hypothetical protein; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 1604819 murF 7550719 murF Staphylococcus carnosus subsp. carnosus TM300 putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_002634672.1 1603455 R 396513 CDS YP_002634673.1 224477067 7551824 complement(1604832..1605902) 1 NC_012121.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 1605902 ddl 7551824 ddl Staphylococcus carnosus subsp. carnosus TM300 D-alanyl-alanine synthetase A YP_002634673.1 1604832 R 396513 CDS YP_002634674.1 224477068 7551518 1606160..1607377 1 NC_012121.1 similar to Rod shape-determining protein rodA (mrdB),Escherichia coli,N terminal incomplete alignment,Expect = 1e-32,Identities = 102/331 (30%), Positives = 178/331 (53%), Gaps = 27/331 (8%) ,(P39604) Hypothetical protein ywcF,InterPro: Cell cycle protein; Hypothetical protein; hypothetical protein 1607377 7551518 Sca_1584 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634674.1 1606160 D 396513 CDS YP_002634675.1 224477069 7550720 complement(1607665..1609866) 1 NC_012121.1 N terminal incomplete alignment (74AA not aligned). Rest similar to Copper-transporting P-type ATPase copA (EC 3.6.3.-)Bacillus subtilis,Expect = 0.0, Identities = 384/739 (51%), Positives = 507/739 (68%), Gaps = 24/739 (3%),(O32220) Copper-transporting P-type ATPase copA (EC 3.6.3.-) (CopA protein),InterPro: Copper-translocating P-type ATPase; Hypothetical protein; putative copper-transporting P-type ATPase 1609866 copA 7550720 copA Staphylococcus carnosus subsp. carnosus TM300 putative copper-transporting P-type ATPase YP_002634675.1 1607665 R 396513 CDS YP_002634676.1 224477070 7551482 complement(1609963..1610172) 1 NC_012121.1 similar to Copper chaperone copZ,Synonyms CopZ protein,Copper-ion-binding protein copZ, Bacillus subtilis,,Expect = 5e-09, Identities = 34/69 (49%),Positives = 46/69 (66%),(O32221) Copper chaperone copZ (CopZ protein) (Copper-ion-binding protein),InterPro: Heavy metal binding; Hypothetical protein; putative copper-ion-binding protein 1610172 copZ 7551482 copZ Staphylococcus carnosus subsp. carnosus TM300 putative copper-ion-binding protein YP_002634676.1 1609963 R 396513 CDS YP_002634677.1 224477071 7551483 complement(1610187..1610393) 1 NC_012121.1 C terminal similar to copper ion binding protein,(O32620) COP associated protein (Copper ion binding protein),InterPro: Heavy metal binding; Hypothetical protein; hypothetical protein 1610393 7551483 Sca_1587 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634677.1 1610187 R 396513 CDS YP_002634678.1 224477072 7550721 complement(1610405..1610698) 1 NC_012121.1 (P76424) Hypothetical protein yohL,InterPro: Protein of unknown function DUF156; Hypothetical protein; hypothetical protein 1610698 7550721 Sca_1588 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634678.1 1610405 R 396513 CDS YP_002634679.1 224477073 7550722 1610863..1612344 1 NC_012121.1 Cardiolipin synthetase,Synonyms EC 2.7.8.-,Similar to cardiolipin synthase cls, Bacillus pseudofirmus,,Expect = 1e-98, Identities = 205/480 (42%), Positives = 288/480 (60%), Gaps = 14/480 (2%),(Q8CNK3) Cardiolipin synthetase 2 (EC 2.7.8.-) (Cardiolipin synthase 2) (CL synthase 2),InterPro: Phospholipase D/Transphosphatidylase; Hypothetical protein; putative cardiolipin synthetase 1612344 7550722 Sca_1589 Staphylococcus carnosus subsp. carnosus TM300 putative cardiolipin synthetase YP_002634679.1 1610863 D 396513 CDS YP_002634680.1 224477074 7550723 1612369..1613016 1 NC_012121.1 (P54168) Hypothetical protein ypgQ,InterPro: Metal-dependent phosphohydrolase HD region; Hypothetical protein; hypothetical protein 1613016 7550723 Sca_1590 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634680.1 1612369 D 396513 CDS YP_002634681.1 224477075 7550724 complement(1613107..1613619) 1 NC_012121.1 similar to B. subtilis regulatory protein PaiA,Expect = 1e-67, Identities = 82/169 (48%), Positives = 126/169 (74%),(P21340) Protease synthase and sporulation negative regulatory protein PAI,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; putative regulatory protein PaiA 1613619 paiA 7550724 paiA Staphylococcus carnosus subsp. carnosus TM300 putative regulatory protein PaiA YP_002634681.1 1613107 R 396513 CDS YP_002634682.1 224477076 7551898 complement(1613730..1614599) 1 NC_012121.1 similar to putative lipoprotein precursor ,(Q8CMK8) Membrane protein oxaA 2 precursor,InterPro: 60 kDa inner membrane protein; Hypothetical protein; hypothetical protein 1614599 7551898 Sca_1592 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634682.1 1613730 R 396513 CDS YP_002634683.1 224477077 7550725 complement(1614688..1615326) 1 NC_012121.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 1615326 thiE 7550725 thiE Staphylococcus carnosus subsp. carnosus TM300 thiamine-phosphate pyrophosphorylase YP_002634683.1 1614688 R 396513 CDS YP_002634684.1 224477078 7552178 complement(1615327..1616121) 1 NC_012121.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 1616121 thiM 7552178 thiM Staphylococcus carnosus subsp. carnosus TM300 hydroxyethylthiazole kinase YP_002634684.1 1615327 R 396513 CDS YP_002634685.1 224477079 7552183 complement(1616114..1616935) 1 NC_012121.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 1616935 thiD 7552183 thiD Staphylococcus carnosus subsp. carnosus TM300 phosphomethylpyrimidine kinase YP_002634685.1 1616114 R 396513 CDS YP_002634686.1 224477080 7552177 complement(1616932..1617618) 1 NC_012121.1 similar to transcriptional activator tenA ,Bacillus subtilis, Expect = 1e-10,Identities = 55/224 (24%),Positives = 100/224 (44%), Gaps = 9/224 (4%),InterPro: TENA/THI-4 protein; Hypothetical protein; putative transcriptional activator tenA 1617618 tenA 7552177 tenA Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional activator tenA YP_002634686.1 1616932 R 396513 CDS YP_002634687.1 224477081 7552172 complement(1617895..>1618371) 1 NC_012121.1 similar to C-terminal part of sceD protein [Staphylococcus epidermidis RP62A] (YP_189267); Hypothetical protein; SceE (fragment 2) >1618371 sceE'' 7552172 sceE'' Staphylococcus carnosus subsp. carnosus TM300 SceE (fragment 2) YP_002634687.1 1617895 R 396513 CDS YP_002634688.1 224477082 7552111 complement(1618301..1618519) 1 NC_012121.1 Hypothetical protein; SceE (fragment 1) 1618519 sceE' 7552111 sceE' Staphylococcus carnosus subsp. carnosus TM300 SceE (fragment 1) YP_002634688.1 1618301 R 396513 CDS YP_002634689.1 224477083 7552110 complement(1618738..1619451) 1 NC_012121.1 (Q99R69) Immunodominant staphylococcal antigen A precursor; Hypothetical protein; SceA protein 1619451 sceA 7552110 sceA Staphylococcus carnosus subsp. carnosus TM300 SceA protein YP_002634689.1 1618738 R 396513 CDS YP_002634690.1 224477084 7552107 complement(1619664..1620362) 1 NC_012121.1 (Q8CMZ9) Immunodominant staphylococcal antigen A precursor; Hypothetical protein; SceD protein 1620362 sceD 7552107 sceD Staphylococcus carnosus subsp. carnosus TM300 SceD protein YP_002634690.1 1619664 R 396513 CDS YP_002634691.1 224477085 7552109 complement(1620893..1621330) 1 NC_012121.1 (P59927) Single-strand binding protein (SSB) (Helix-destabilizing protein),InterPro: Single-strand binding protein; Hypothetical protein; single strand DNA-binding protein 1621330 ssb 7552109 ssb Staphylococcus carnosus subsp. carnosus TM300 single strand DNA-binding protein YP_002634691.1 1620893 R 396513 CDS YP_002634692.1 224477086 7552148 1621519..1621968 1 NC_012121.1 Hypothetical protein; hypothetical protein 1621968 7552148 Sca_1601 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634692.1 1621519 D 396513 CDS YP_002634693.1 224477087 7550726 complement(1622019..1622456) 1 NC_012121.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1622456 fabZ 7550726 fabZ Staphylococcus carnosus subsp. carnosus TM300 (3R)-hydroxymyristoyl-ACP dehydratase YP_002634693.1 1622019 R 396513 CDS YP_002634694.1 224477088 7551557 complement(1622661..1623932) 1 NC_012121.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1623932 murA 7551557 murA Staphylococcus carnosus subsp. carnosus TM300 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002634694.1 1622661 R 396513 CDS YP_002634695.1 224477089 7551818 complement(1624043..1624276) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1624276 7551818 Sca_1604 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634695.1 1624043 R 396513 CDS YP_002634696.1 224477090 7550727 complement(1624457..1624864) 1 NC_012121.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 1624864 atpC 7550727 atpC Staphylococcus carnosus subsp. carnosus TM300 F0F1 ATP synthase subunit epsilon YP_002634696.1 1624457 R 396513 CDS YP_002634697.1 224477091 7551433 complement(1624885..1626300) 1 NC_012121.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1626300 atpD 7551433 atpD Staphylococcus carnosus subsp. carnosus TM300 F0F1 ATP synthase subunit beta YP_002634697.1 1624885 R 396513 CDS YP_002634698.1 224477092 7551432 complement(1626323..1627186) 1 NC_012121.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1627186 atpG 7551432 atpG Staphylococcus carnosus subsp. carnosus TM300 F0F1 ATP synthase subunit gamma YP_002634698.1 1626323 R 396513 CDS YP_002634699.1 224477093 7551436 complement(1627222..1628589) 1 NC_012121.1 (Q99SF3) ATP synthase alpha chain (EC 3.6.3.14),InterPro: ATP synthase F1 alpha subunit,Similar to C-terminal part of ATP synthase alpha chain [Staphylococcus aureus subsp. aureus MSSA476](CAG43816); Hypothetical protein; ATP synthase alpha chain (fragment 2) 1628589 atpA'' 7551436 atpA'' Staphylococcus carnosus subsp. carnosus TM300 ATP synthase alpha chain (fragment 2) YP_002634699.1 1627222 R 396513 CDS YP_002634700.1 224477094 7551430 complement(1628579..1628731) 1 NC_012121.1 (P48080) ATP synthase alpha chain (EC 3.6.3.14),Similar to N-terminus of ATP synthase alpha chain [Staphylococcus aureus subsp. aureus MSSA476] (CAG43816); Hypothetical protein; ATP synthase alpha chain (fragment 1) 1628731 atpA' 7551430 atpA' Staphylococcus carnosus subsp. carnosus TM300 ATP synthase alpha chain (fragment 1) YP_002634700.1 1628579 R 396513 CDS YP_002634701.1 224477095 7551429 complement(1628755..1629294) 1 NC_012121.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 1629294 atpH 7551429 atpH Staphylococcus carnosus subsp. carnosus TM300 F0F1 ATP synthase subunit delta YP_002634701.1 1628755 R 396513 CDS YP_002634702.1 224477096 7551437 complement(1629294..1629818) 1 NC_012121.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; F0F1 ATP synthase subunit B 1629818 atpF 7551437 atpF Staphylococcus carnosus subsp. carnosus TM300 F0F1 ATP synthase subunit B YP_002634702.1 1629294 R 396513 CDS YP_002634703.1 224477097 7551435 complement(1629934..1630146) 1 NC_012121.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 1630146 atpE 7551435 atpE Staphylococcus carnosus subsp. carnosus TM300 F0F1 ATP synthase subunit C YP_002634703.1 1629934 R 396513 CDS YP_002634704.1 224477098 7551434 complement(1630190..1630915) 1 NC_012121.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1630915 atpB 7551434 atpB Staphylococcus carnosus subsp. carnosus TM300 F0F1 ATP synthase subunit A YP_002634704.1 1630190 R 396513 CDS YP_002634705.1 224477099 7551431 complement(1631460..1632611) 1 NC_012121.1 similar to UDP-N-acetylglucosamine 2-epimerase (mnaA) (bacillus subtilis) Expect = 1e-136 Identities = 238/373 (63%), Positives = 302/373 (80%),(Q9L6R5) UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) (UDP-GlcNAc-2-epimerase),InterPro: UDP-N-acetylglucosamine 2-epimerase; Hypothetical protein; UDP-GlcNAc 2-epimerase 1632611 mnaA 7551431 mnaA Staphylococcus carnosus subsp. carnosus TM300 UDP-GlcNAc 2-epimerase YP_002634705.1 1631460 R 396513 CDS YP_002634706.1 224477100 7551784 complement(1632793..1633422) 1 NC_012121.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1633422 upp 7551784 upp Staphylococcus carnosus subsp. carnosus TM300 uracil phosphoribosyltransferase YP_002634706.1 1632793 R 396513 CDS YP_002634707.1 224477101 7552281 complement(1633447..1634685) 1 NC_012121.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1634685 glyA 7552281 glyA Staphylococcus carnosus subsp. carnosus TM300 serine hydroxymethyltransferase YP_002634707.1 1633447 R 396513 CDS YP_002634708.1 224477102 7551653 complement(1634711..1635238) 1 NC_012121.1 (P39157) Hypothetical protein ywlG,InterPro: Conserved hypothetical protein 1440; Hypothetical protein; hypothetical protein 1635238 7551653 Sca_1617 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634708.1 1634711 R 396513 CDS YP_002634709.1 224477103 7550728 complement(1635383..1635808) 1 NC_012121.1 (P39155) Putative low molecular weight protein-tyrosine-phosphatase ywlE (EC 3.1.3.48),InterPro: Low molecular weight phosphotyrosine protein phosphatase; Hypothetical protein; hypothetical protein 1635808 7550728 Sca_1618 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634709.1 1635383 R 396513 CDS YP_002634710.1 224477104 7550729 complement(1635805..1636851) 1 NC_012121.1 (P39153) Hypothetical protein ywlC,InterPro: Sua5/YciO/YrdC/YwlC; Hypothetical protein; hypothetical protein 1636851 7550729 Sca_1619 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634710.1 1635805 R 396513 CDS YP_002634711.1 224477105 7550730 complement(1636943..1637767) 1 NC_012121.1 similar to protoporphyrinogen oxidase (hemK) ,(P45873) HemK protein homolog (EC 2.1.1.-),InterPro: Modification methylase HemK family; Hypothetical protein; hypothetical protein 1637767 7550730 Sca_1620 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634711.1 1636943 R 396513 CDS YP_002634712.1 224477106 7550731 complement(1637775..1638851) 1 NC_012121.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1638851 prfA 7550731 prfA Staphylococcus carnosus subsp. carnosus TM300 peptide chain release factor 1 YP_002634712.1 1637775 R 396513 CDS YP_002634713.1 224477107 7551956 complement(1638851..1639450) 1 NC_012121.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 1639450 tdk 7551956 tdk Staphylococcus carnosus subsp. carnosus TM300 thymidine kinase YP_002634713.1 1638851 R 396513 CDS YP_002634714.1 224477108 7552171 complement(1639586..1639849) 1 NC_012121.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 1639849 rpmE2 7552171 rpmE2 Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L31 type B YP_002634714.1 1639586 R 396513 CDS YP_002634715.1 224477109 7552066 complement(1639981..1641297) 1 NC_012121.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 1641297 rho 7552066 rho Staphylococcus carnosus subsp. carnosus TM300 transcription termination factor Rho YP_002634715.1 1639981 R 396513 CDS YP_002634716.1 224477110 7552020 complement(1641514..1642941) 1 NC_012121.1 (Q25417) Aldehyde dehydrogenase mitochondrial precursor (EC 1.2.1.3) (ALDH class 2) (P51),InterPro: Aldehyde dehydrogenase; Hypothetical protein; putative aldehyde dehydrogenase family protein 1642941 7552020 Sca_1625 Staphylococcus carnosus subsp. carnosus TM300 putative aldehyde dehydrogenase family protein YP_002634716.1 1641514 R 396513 CDS YP_002634717.1 224477111 7550732 complement(1643066..1643401) 1 NC_012121.1 (P96673) Hypothetical UPF0087 protein ydeP,InterPro: Protein of unknown function DUF24; Hypothetical protein; hypothetical protein 1643401 7550732 Sca_1626 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634717.1 1643066 R 396513 CDS YP_002634718.1 224477112 7550733 complement(1643466..1644725) 1 NC_012121.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1644725 murA2 7550733 murA2 Staphylococcus carnosus subsp. carnosus TM300 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002634718.1 1643466 R 396513 CDS YP_002634719.1 224477113 7551819 complement(1645253..1646110) 1 NC_012121.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; fructose-bisphosphate aldolase 1646110 fbaA 7551819 fbaA Staphylococcus carnosus subsp. carnosus TM300 fructose-bisphosphate aldolase YP_002634719.1 1645253 R 396513 CDS YP_002634720.1 224477114 7551562 1646414..1646947 1 NC_012121.1 (P06629) Hypothetical protein ywjG; Hypothetical protein; hypothetical protein 1646947 7551562 Sca_1629 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634720.1 1646414 D 396513 CDS YP_002634721.1 224477115 7550734 complement(1646996..1648615) 1 NC_012121.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1648615 pyrG 7550734 pyrG Staphylococcus carnosus subsp. carnosus TM300 CTP synthetase YP_002634721.1 1646996 R 396513 CDS YP_002634722.1 224477116 7551996 complement(1648857..1649411) 1 NC_012121.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 1649411 7551996 Sca_1631 Staphylococcus carnosus subsp. carnosus TM300 DNA-directed RNA polymerase subunit delta YP_002634722.1 1648857 R 396513 CDS YP_002634723.1 224477117 7550735 complement(1649540..1650400) 1 NC_012121.1 similar to spermine/spermidine acetyltransferase blt,(P39909) Spermine/spermidine acetyltransferase (EC 2.3.1.57),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 1650400 7550735 Sca_1632 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634723.1 1649540 R 396513 CDS YP_002634724.1 224477118 7550736 complement(1650472..1650837) 1 NC_012121.1 (P16681) PhnB protein; Hypothetical protein; hypothetical protein 1650837 7550736 Sca_1633 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634724.1 1650472 R 396513 CDS YP_002634725.1 224477119 7550737 1650926..1651732 1 NC_012121.1 catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A; pantothenate kinase 1651732 7550737 Sca_1634 Staphylococcus carnosus subsp. carnosus TM300 pantothenate kinase YP_002634725.1 1650926 D 396513 CDS YP_002634726.1 224477120 7550738 complement(1651772..1652437) 1 NC_012121.1 (P94528) Probable arabinose-binding protein precursor; Hypothetical protein; hypothetical protein 1652437 7550738 Sca_1635 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634726.1 1651772 R 396513 CDS YP_002634727.1 224477121 7550739 complement(1652570..1654954) 1 NC_012121.1 (P76052) Aminobenzoyl-glutamate utilization protein B,InterPro: Peptidase M20/M25/M40,Note: aa 1 to 386 similar to amidase [Staphylococcus epidermidis ATCC 12228] (AAO05330) (aa 1 to 386). aa 405 to 792 similar to conserved hypothetical protein [Staphylococcus epidermidis ATCC ,12228] (AAO05329) (aa 8 to 393).; Hypothetical protein; hypothetical protein 1654954 7550739 Sca_1636 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634727.1 1652570 R 396513 CDS YP_002634728.1 224477122 7550740 1655240..1655704 1 NC_012121.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1655704 luxS 7550740 luxS Staphylococcus carnosus subsp. carnosus TM300 S-ribosylhomocysteinase YP_002634728.1 1655240 D 396513 CDS YP_002634729.1 224477123 7551759 complement(1655861..1656886) 1 NC_012121.1 (Q8CPA8) Protein femB,InterPro: Methicillin resistance protein,Similar to C-terminus of fmhA protein / lysostaphin immunity factor [Staphylococcus haemolyticus JCSC1435] (BAE03951) (aa 17 to 413); Hypothetical protein; hypothetical protein 1656886 fmhA'' 7551759 fmhA'' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634729.1 1655861 R 396513 CDS YP_002634730.1 224477124 7551581 complement(1657012..1657113) 1 NC_012121.1 similar to N-terminus of fmhA protein / lysostaphin immunity factor [Staphylococcus haemolyticus JCSC1435] (BAE03951) (aa 1 to 16).; Hypothetical protein; hypothetical protein 1657113 fmhA' 7551581 fmhA' Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634730.1 1657012 R 396513 CDS YP_002634731.1 224477125 7551580 complement(1657268..1657930) 1 NC_012121.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1657930 dra 7551580 dra Staphylococcus carnosus subsp. carnosus TM300 deoxyribose-phosphate aldolase YP_002634731.1 1657268 R 396513 CDS YP_002634732.1 224477126 7551540 1658155..1658862 1 NC_012121.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 1658862 deoD 7551540 deoD Staphylococcus carnosus subsp. carnosus TM300 purine nucleoside phosphorylase YP_002634732.1 1658155 D 396513 CDS YP_002634733.1 224477127 7551520 complement(1658848..1658946) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1658946 7551520 Sca_1642 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634733.1 1658848 R 396513 CDS YP_002634734.1 224477128 7550741 complement(1658924..1659685) 1 NC_012121.1 no complete alignment, local similarity to:,(Q47746) D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase),InterPro: DD-carboxypeptidase VanY; Hypothetical protein; hypothetical protein 1659685 7550741 Sca_1643 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634734.1 1658924 R 396513 CDS YP_002634735.1 224477129 7550742 complement(1659869..1660315) 1 NC_012121.1 (P73321) Hypothetical protein slr1894,InterPro: Ferritin and Dps; Hypothetical protein; general stress protein 20U 1660315 dps 7550742 dps Staphylococcus carnosus subsp. carnosus TM300 general stress protein 20U YP_002634735.1 1659869 R 396513 CDS YP_002634736.1 224477130 7551539 complement(1660673..1661056) 1 NC_012121.1 (P40761) Hypothetical protein yuxK (ORF2); Hypothetical protein; hypothetical protein 1661056 7551539 Sca_1645 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634736.1 1660673 R 396513 CDS YP_002634737.1 224477131 7550743 complement(1661193..1662569) 1 NC_012121.1 (P36112) Hypothetical 61.1 kDa protein in YPT52-DBP7 intergenic region; Hypothetical protein; hypothetical protein 1662569 7550743 Sca_1646 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634737.1 1661193 R 396513 CDS YP_002634738.1 224477132 7550744 complement(1662700..1662930) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1662930 7550744 Sca_1647 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634738.1 1662700 R 396513 CDS YP_002634739.1 224477133 7550745 complement(1662958..1663896) 1 NC_012121.1 (P39841) Mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) (Phosphohexomutase),InterPro: Mannose-6-phosphate isomerase type I; Hypothetical protein; putative mannose-6-phosphate isomerase 1663896 7550745 Sca_1648 Staphylococcus carnosus subsp. carnosus TM300 putative mannose-6-phosphate isomerase YP_002634739.1 1662958 R 396513 CDS YP_002634740.1 224477134 7550746 complement(1664453..1665151) 1 NC_012121.1 similar to transcriptional regulator, GntR family,(P44487) Uxu operon regulator,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein; hypothetical protein 1665151 7550746 Sca_1649 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634740.1 1664453 R 396513 CDS YP_002634741.1 224477135 7550747 complement(1665427..1666089) 1 NC_012121.1 (Q04304) Hypothetical 24.9 kDa protein in RCA1-NPL6 intergenic region; Hypothetical protein; hypothetical protein 1666089 7550747 Sca_1650 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634741.1 1665427 R 396513 CDS YP_002634742.1 224477136 7550748 1666252..1666557 1 NC_012121.1 (P45949) Arsenical resistance operon repressor,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein; putative repressor protein 1666557 czrA 7550748 czrA Staphylococcus carnosus subsp. carnosus TM300 putative repressor protein YP_002634742.1 1666252 D 396513 CDS YP_002634743.1 224477137 7551509 1666581..1667522 1 NC_012121.1 (Q8ZGY6) Zinc transporter zitB,InterPro: Cation efflux protein; Hypothetical protein; putative cation-efflux system membrane protein 1667522 czrB 7551509 czrB Staphylococcus carnosus subsp. carnosus TM300 putative cation-efflux system membrane protein YP_002634743.1 1666581 D 396513 CDS YP_002634744.1 224477138 7551510 complement(1667572..1668306) 1 NC_012121.1 no complete alignments, truncated ORF?,local similarity to,(Q87ST8) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein; hypothetical protein 1668306 7551510 Sca_1653 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634744.1 1667572 R 396513 CDS YP_002634745.1 224477139 7550749 1668437..1669621 1 NC_012121.1 (Q92BW9) DNA translocase ftsK; Hypothetical protein; hypothetical protein 1669621 7550749 Sca_1654 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634745.1 1668437 D 396513 CDS YP_002634746.1 224477140 7550750 complement(1669710..1670564) 1 NC_012121.1 (Q8X8L6) Hypothetical protein yigL,InterPro: Cof protein; Hypothetical protein; hypothetical protein 1670564 7550750 Sca_1655 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634746.1 1669710 R 396513 CDS YP_002634747.1 224477141 7550751 complement(1670763..1671872) 1 NC_012121.1 (P76102) Hypothetical protein ydcM,InterPro: Transposase (probable) IS891/IS1136/IS1341 family; Hypothetical protein; putative transposase 1671872 7550751 Sca_1656 Staphylococcus carnosus subsp. carnosus TM300 putative transposase YP_002634747.1 1670763 R 396513 CDS YP_002634748.1 224477142 7550752 complement(1672276..1674081) 1 NC_012121.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1674081 glmS 7550752 glmS Staphylococcus carnosus subsp. carnosus TM300 glucosamine--fructose-6-phosphate aminotransferase YP_002634748.1 1672276 R 396513 CDS YP_002634749.1 224477143 7551635 1674783..1676330 1 NC_012121.1 (P28008) PTS system mannitol-specific IIBC component (EIIBC-Mtl) (Mannitol-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Mtl),InterPro: PTS system mannitol-specific enzyme IIC; Hypothetical protein; PTS system, mannitol-specific IIBC component 1676330 mtlA 7551635 mtlA Staphylococcus carnosus subsp. carnosus TM300 PTS system, mannitol-specific IIBC component YP_002634749.1 1674783 D 396513 CDS YP_002634750.1 224477144 7551814 1676367..1678400 1 NC_012121.1 similar to transcription antiterminator BglG family ,(P46321) Probable licABCH operon regulator,InterPro: Transcriptional antiterminator bglG; Hypothetical protein; hypothetical protein 1678400 7551814 Sca_1659 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634750.1 1676367 D 396513 CDS YP_002634751.1 224477145 7550753 1678407..1678841 1 NC_012121.1 (P17875) PTS system mannitol-specific IIA component (EIIA-Mtl) (Mannitol-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Mtl),InterPro: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Hypothetical protein; PTS system, mannitol-specific IIA component 1678841 mtlF 7550753 mtlF Staphylococcus carnosus subsp. carnosus TM300 PTS system, mannitol-specific IIA component YP_002634751.1 1678407 D 396513 CDS YP_002634752.1 224477146 7551816 1678841..1679944 1 NC_012121.1 (Q99SA1) Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17),InterPro: Mannitol dehydrogenase; Hypothetical protein; mannitol-1-phosphate 5-dehydrogenase 1679944 mtlD 7551816 mtlD Staphylococcus carnosus subsp. carnosus TM300 mannitol-1-phosphate 5-dehydrogenase YP_002634752.1 1678841 D 396513 CDS YP_002634753.1 224477147 7551815 1680054..1680725 1 NC_012121.1 similar to MgtC/SapB family,(P26606) Hypothetical protein yhiD,InterPro: MgtC/SapB transporter; Hypothetical protein; hypothetical protein 1680725 7551815 Sca_1662 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634753.1 1680054 D 396513 CDS YP_002634754.1 224477148 7550754 complement(1680775..1682130) 1 NC_012121.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1682130 glmM 7550754 glmM Staphylococcus carnosus subsp. carnosus TM300 phosphoglucosamine mutase YP_002634754.1 1680775 R 396513 CDS YP_002634755.1 224477149 7551634 complement(1682160..1683092) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1683092 7551634 Sca_1664 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634755.1 1682160 R 396513 CDS YP_002634756.1 224477150 7550755 complement(1683094..1683900) 1 NC_012121.1 (P75528) Hypothetical protein MG105 homolog (K04_orf202),InterPro: Protein of unknown function DUF147; Hypothetical protein; hypothetical protein 1683900 7550755 Sca_1665 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634756.1 1683094 R 396513 CDS YP_002634757.1 224477151 7551347 complement(1690035..1691102) 1 NC_012121.1 similar to ATP-binding Mrp-like protein ,(P50863) Mrp protein homolog,InterPro: Mrp family; Hypothetical protein; hypothetical protein 1691102 7551347 Sca_1666 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634757.1 1690035 R 396513 CDS YP_002634758.1 224477152 7550757 complement(1691270..1692718) 1 NC_012121.1 similar to multidrug resistance protein,(P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Hypothetical protein; hypothetical protein 1692718 7550757 Sca_1667 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634758.1 1691270 R 396513 CDS YP_002634759.1 224477153 7550758 complement(1692798..1693265) 1 NC_012121.1 (Q9PPI9) DNA polymerase III alpha subunit (EC 2.7.7.7); Hypothetical protein; hypothetical protein 1693265 7550758 Sca_1668 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634759.1 1692798 R 396513 CDS YP_002634760.1 224477154 7550759 complement(1693367..1694704) 1 NC_012121.1 similar to multidrug transporter,(P44927) Multidrug resistance protein B homolog,InterPro: General substrate transporter; Hypothetical protein; hypothetical protein 1694704 7550759 Sca_1669 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634760.1 1693367 R 396513 CDS YP_002634761.1 224477155 7550760 complement(1694822..1695505) 1 NC_012121.1 (P54176) Hemolysin III (HLY-III),InterPro: Hly-III related proteins; Hypothetical protein; putative hemolysin III 1695505 7550760 Sca_1670 Staphylococcus carnosus subsp. carnosus TM300 putative hemolysin III YP_002634761.1 1694822 R 396513 CDS YP_002634762.1 224477156 7550761 complement(1695526..1696719) 1 NC_012121.1 similar to UTP--glucose-1-phosphate uridylyltransferase,(Q16222) UDP-N-acetylhexosamine pyrophosphorylase (Antigen X) (AGX) (Sperm-associated antigen 2) [Includes: UDP-N-acetylgalactosamine pyrophosphorylase (EC 2.7.7.-) (AGX-1); UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (AGX-2)],InterPro: UTP--glucose-1-phosphate uridylyltransferase; Hypothetical protein; hypothetical protein 1696719 7550761 Sca_1671 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634762.1 1695526 R 396513 CDS YP_002634763.1 224477157 7550762 complement(1696924..1697439) 1 NC_012121.1 (O32205) Hypothetical protein yvsG precursor,InterPro: Predicted membrane-bound metal-dependent hydrolase; Hypothetical protein; hypothetical protein 1697439 7550762 Sca_1672 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634763.1 1696924 R 396513 CDS YP_002634764.1 224477158 7550763 1697629..1697886 1 NC_012121.1 (Q9PQK6) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS); Hypothetical protein; hypothetical protein 1697886 7550763 Sca_1673 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634764.1 1697629 D 396513 CDS YP_002634765.1 224477159 7550764 complement(1697940..1698089) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1698089 7550764 Sca_1674 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634765.1 1697940 R 396513 CDS YP_002634766.1 224477160 7550765 complement(1698080..1698913) 1 NC_012121.1 weak similarity to low temperature requirement A protein(O33683) Hypothetical protein RA0937; Hypothetical protein; hypothetical protein 1698913 7550765 Sca_1675 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634766.1 1698080 R 396513 CDS YP_002634767.1 224477161 7550766 1699082..1699426 1 NC_012121.1 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; heme-degrading monooxygenase IsdG 1699426 7550766 Sca_1676 Staphylococcus carnosus subsp. carnosus TM300 heme-degrading monooxygenase IsdG YP_002634767.1 1699082 D 396513 CDS YP_002634768.1 224477162 7550767 complement(1699474..1700844) 1 NC_012121.1 (P30267) Hypothetical 50.9 kDa protein in katA 3region (ORF A); Hypothetical protein; hypothetical protein 1700844 7550767 Sca_1677 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634768.1 1699474 R 396513 CDS YP_002634769.1 224477163 7550768 complement(1701104..1702066) 1 NC_012121.1 (P15029) Iron(III) dicitrate transport system permease protein fecD,InterPro: FecCD transport family; Hypothetical protein; putative FecCD transport family protein 1702066 7550768 Sca_1678 Staphylococcus carnosus subsp. carnosus TM300 putative FecCD transport family protein YP_002634769.1 1701104 R 396513 CDS YP_002634770.1 224477164 7550769 complement(1702063..1703094) 1 NC_012121.1 (P49936) Ferrichrome transport system permease protein fhuB,InterPro: FecCD transport family; Hypothetical protein; putative FecCD transport family protein 1703094 7550769 Sca_1679 Staphylococcus carnosus subsp. carnosus TM300 putative FecCD transport family protein YP_002634770.1 1702063 R 396513 CDS YP_002634771.1 224477165 7550770 complement(1703109..1704110) 1 NC_012121.1 similar to Iron(III) dicitrate-binding periplasmic protein [Precursor],(E. coli),(P15028) Iron(III) dicitrate-binding periplasmic protein precursor,InterPro: Periplasmic binding protein; Hypothetical protein; putative ferrichrome ABC transporter (binding protein) 1704110 fecB 7550770 fecB Staphylococcus carnosus subsp. carnosus TM300 putative ferrichrome ABC transporter (binding protein) YP_002634771.1 1703109 R 396513 CDS YP_002634772.1 224477166 7551568 complement(1704388..1705458) 1 NC_012121.1 (Q8R860) Alanine racemase 2 (EC 5.1.1.1),InterPro: Protein of unknown function UPF0001; Hypothetical protein; hypothetical protein 1705458 7551568 Sca_1681 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634772.1 1704388 R 396513 CDS YP_002634773.1 224477167 7550771 complement(1705461..1707218) 1 NC_012121.1 (Q9Z3R0) Rhizobactin siderophore biosynthesis protein rhbC,InterPro: IucA/IucC; Hypothetical protein; hypothetical protein 1707218 7550771 Sca_1682 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634773.1 1705461 R 396513 CDS YP_002634774.1 224477168 7550772 complement(1707215..1708390) 1 NC_012121.1 similar to transporter,(P21191) Quinolone resistance protein norA; Hypothetical protein; hypothetical protein 1708390 7550772 Sca_1683 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634774.1 1707215 R 396513 CDS YP_002634775.1 224477169 7550773 1708497..1710467 1 NC_012121.1 (P55706) Hypothetical 71.0 kDa protein y4XN,InterPro: IucA/IucC; Hypothetical protein; hypothetical protein 1710467 7550773 Sca_1684 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634775.1 1708497 D 396513 CDS YP_002634776.1 224477170 7550774 complement(1710604..1711101) 1 NC_012121.1 (Q53485) Alkaline shock protein,InterPro: Protein of unknown function DUF322; Hypothetical protein; putative alkaline shock protein 1711101 7550774 Sca_1685 Staphylococcus carnosus subsp. carnosus TM300 putative alkaline shock protein YP_002634776.1 1710604 R 396513 CDS YP_002634777.1 224477171 7550775 complement(1711165..1711401) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1711401 7550775 Sca_1686 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634777.1 1711165 R 396513 CDS YP_002634778.1 224477172 7550776 complement(1711413..1711952) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1711952 7550776 Sca_1687 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634778.1 1711413 R 396513 CDS YP_002634779.1 224477173 7550777 complement(1712118..1713662) 1 NC_012121.1 (P54417) Glycine betaine transporter opuD,InterPro: BCCT transporter; Hypothetical protein; glycine betaine transporter opuD 1713662 opuD2 7550777 opuD2 Staphylococcus carnosus subsp. carnosus TM300 glycine betaine transporter opuD YP_002634779.1 1712118 R 396513 CDS YP_002634780.1 224477174 7551896 complement(1713828..1714841) 1 NC_012121.1 Putative NADP-dependent oxidoreductase,(Q8CRJ7) Zinc-type alcohol dehydrogenase-like protein SE1777,InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein; hypothetical protein 1714841 7551896 Sca_1689 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634780.1 1713828 R 396513 CDS YP_002634781.1 224477175 7550778 complement(1714854..1715870) 1 NC_012121.1 (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein; putative zinc-binding dehydrogenase 1715870 7550778 Sca_1690 Staphylococcus carnosus subsp. carnosus TM300 putative zinc-binding dehydrogenase YP_002634781.1 1714854 R 396513 CDS YP_002634782.1 224477176 7550779 complement(1715943..1716818) 1 NC_012121.1 (P15801) DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit); Hypothetical protein; hypothetical protein 1716818 7550779 Sca_1691 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634782.1 1715943 R 396513 CDS YP_002634783.1 224477177 7550780 complement(1716952..1717959) 1 NC_012121.1 (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Conserved hypothetical protein; putative NADP-dependent oxidoreductase 1717959 7550780 Sca_1692 Staphylococcus carnosus subsp. carnosus TM300 putative NADP-dependent oxidoreductase YP_002634783.1 1716952 R 396513 CDS YP_002634784.1 224477178 7550781 complement(1718147..1718902) 1 NC_012121.1 (Q8CR12) Hypothetical UPF0085 protein SE2159,InterPro: Protein of unknown function DUF299; Hypothetical protein; hypothetical protein 1718902 7550781 Sca_1693 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634784.1 1718147 R 396513 CDS YP_002634785.1 224477179 7550782 complement(1718952..1721594) 1 NC_012121.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1721594 ppdK 7550782 ppdK Staphylococcus carnosus subsp. carnosus TM300 pyruvate phosphate dikinase YP_002634785.1 1718952 R 396513 CDS YP_002634786.1 224477180 7551953 1721814..1722335 1 NC_012121.1 (P09278) Large tegument protein; Hypothetical protein; hypothetical protein 1722335 7551953 Sca_1695 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634786.1 1721814 D 396513 CDS YP_002634787.1 224477181 7550783 1722509..1722988 1 NC_012121.1 (P37187) PTS system galactitol-specific IIA component (EIIA-Gat) (Galacticol-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69),InterPro: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Hypothetical protein; hypothetical protein 1722988 7550783 Sca_1696 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634787.1 1722509 D 396513 CDS YP_002634788.1 224477182 7550784 complement(1723044..1724261) 1 NC_012121.1 (Q92F90) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS),InterPro: PAS domain; Hypothetical protein; hypothetical protein 1724261 7550784 Sca_1697 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634788.1 1723044 R 396513 CDS YP_002634789.1 224477183 7550785 complement(1724348..1724887) 1 NC_012121.1 similar to,(P39701) Alpha-ribazole phosphatase (EC 3.1.3.73) (Alpha-ribazole-5-phosphate phosphatase),InterPro: Phosphoglycerate/bisphosphoglycerate mutase; Hypothetical protein; hypothetical protein 1724887 7550785 Sca_1698 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634789.1 1724348 R 396513 CDS YP_002634790.1 224477184 7550786 1725152..1725694 1 NC_012121.1 (P32400) N-carbamoylsarcosine amidase (EC 3.5.1.59) (N-carbamoylsarcosine amidohydrolase) (CSHASE),InterPro: Isochorismatase hydrolase family; Conserved hypothetical protein; hypothetical protein 1725694 7550786 Sca_1699 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634790.1 1725152 D 396513 CDS YP_002634791.1 224477185 7550787 complement(1725752..1727080) 1 NC_012121.1 similar to multidrug resistance integral membrane efflux protein EmrB,(P54585) Hypothetical transport protein yhcA,InterPro: Drug resistance transporter EmrB/QacA subfamily; Hypothetical protein; hypothetical protein 1727080 7550787 Sca_1700 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634791.1 1725752 R 396513 CDS YP_002634792.1 224477186 7550788 complement(1727282..1727749) 1 NC_012121.1 (P54182) Putative HTH-type transcriptional regulator ypoP,InterPro: Bacterial regulatory protein MarR family; Conserved hypothetical protein; putative MarR family transcriptional regulator 1727749 7550788 Sca_1701 Staphylococcus carnosus subsp. carnosus TM300 putative MarR family transcriptional regulator YP_002634792.1 1727282 R 396513 CDS YP_002634793.1 224477187 7550789 complement(1727849..1728241) 1 NC_012121.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1728241 rpsI 7550789 rpsI Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S9 YP_002634793.1 1727849 R 396513 CDS YP_002634794.1 224477188 7552082 complement(1728261..1728698) 1 NC_012121.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1728698 rplM 7552082 rplM Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L13 YP_002634794.1 1728261 R 396513 CDS YP_002634795.1 224477189 7552050 complement(1728913..1729716) 1 NC_012121.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1729716 truA 7552050 truA Staphylococcus carnosus subsp. carnosus TM300 tRNA pseudouridine synthase A YP_002634795.1 1728913 R 396513 CDS YP_002634796.1 224477190 7552268 complement(1729721..1730497) 1 NC_012121.1 (Q58966) Hypothetical protein MJ1571,InterPro: Cobalt transport protein; Hypothetical protein; hypothetical protein 1730497 7552268 Sca_1705 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634796.1 1729721 R 396513 CDS YP_002634797.1 224477191 7550790 complement(1730517..1731380) 1 NC_012121.1 with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene; cobalt transporter ATP-binding subunit 1731380 cbiO 7550790 cbiO Staphylococcus carnosus subsp. carnosus TM300 cobalt transporter ATP-binding subunit YP_002634797.1 1730517 R 396513 CDS YP_002634798.1 224477192 7550791 complement(1731377..1732183) 1 NC_012121.1 with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene; cobalt transporter ATP-binding subunit 1732183 cbiO 7550791 cbiO Staphylococcus carnosus subsp. carnosus TM300 cobalt transporter ATP-binding subunit YP_002634798.1 1731377 R 396513 CDS YP_002634799.1 224477193 7550792 complement(1732542..1732910) 1 NC_012121.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1732910 rplQ 7550792 rplQ Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L17 YP_002634799.1 1732542 R 396513 CDS YP_002634800.1 224477194 7552054 complement(1732933..1733877) 1 NC_012121.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1733877 rpoA 7552054 rpoA Staphylococcus carnosus subsp. carnosus TM300 DNA-directed RNA polymerase subunit alpha YP_002634800.1 1732933 R 396513 CDS YP_002634801.1 224477195 7552072 complement(1733963..1734352) 1 NC_012121.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1734352 rpsK 7552072 rpsK Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S11 YP_002634801.1 1733963 R 396513 CDS YP_002634802.1 224477196 7552084 complement(1734376..1734741) 1 NC_012121.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1734741 rpsM 7552084 rpsM Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S13 YP_002634802.1 1734376 R 396513 CDS YP_002634803.1 224477197 7552086 complement(1734764..1734877) 1 NC_012121.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1734877 rpmJ 7552086 rpmJ Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L36 YP_002634803.1 1734764 R 396513 CDS YP_002634804.1 224477198 7552071 complement(1734911..1735129) 1 NC_012121.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1735129 infA 7552071 infA Staphylococcus carnosus subsp. carnosus TM300 translation initiation factor IF-1 YP_002634804.1 1734911 R 396513 CDS YP_002634805.1 224477199 7551720 complement(1735320..1735970) 1 NC_012121.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1735970 adk 7551720 adk Staphylococcus carnosus subsp. carnosus TM300 adenylate kinase YP_002634805.1 1735320 R 396513 CDS YP_002634806.1 224477200 7551374 complement(1735987..1737279) 1 NC_012121.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1737279 secY 7551374 secY Staphylococcus carnosus subsp. carnosus TM300 preprotein translocase subunit SecY YP_002634806.1 1735987 R 396513 CDS YP_002634807.1 224477201 7552124 complement(1737279..1737719) 1 NC_012121.1 late assembly protein; 50S ribosomal protein L15 1737719 rplO 7552124 rplO Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L15 YP_002634807.1 1737279 R 396513 CDS YP_002634808.1 224477202 7552052 complement(1737745..1737933) 1 NC_012121.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1737933 rpmD 7552052 rpmD Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L30 YP_002634808.1 1737745 R 396513 CDS YP_002634809.1 224477203 7552065 complement(1737950..1738450) 1 NC_012121.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1738450 rpsE 7552065 rpsE Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S5 YP_002634809.1 1737950 R 396513 CDS YP_002634810.1 224477204 7552078 complement(1738472..1738834) 1 NC_012121.1 (P09415) 50S ribosomal protein L18,InterPro: Ribosomal protein L18P/L5E; Conserved hypothetical protein; 50S ribosomal protein L18 1738834 rplR 7552078 rplR Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L18 YP_002634810.1 1738472 R 396513 CDS YP_002634811.1 224477205 7552055 complement(1738866..1739402) 1 NC_012121.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1739402 rplF 7552055 rplF Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L6 YP_002634811.1 1738866 R 396513 CDS YP_002634812.1 224477206 7552045 complement(1739428..1739826) 1 NC_012121.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1739826 rpsH 7552045 rpsH Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S8 YP_002634812.1 1739428 R 396513 CDS YP_002634813.1 224477207 7552081 complement(1739859..1740044) 1 NC_012121.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1740044 rpsN 7552081 rpsN Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S14 YP_002634813.1 1739859 R 396513 CDS YP_002634814.1 224477208 7552088 complement(1740070..1740609) 1 NC_012121.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1740609 rplE 7552088 rplE Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L5 YP_002634814.1 1740070 R 396513 CDS YP_002634815.1 224477209 7552044 complement(1740635..1740952) 1 NC_012121.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1740952 rplX 7552044 rplX Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L24 YP_002634815.1 1740635 R 396513 CDS YP_002634816.1 224477210 7552060 complement(1740985..1741353) 1 NC_012121.1 (P06381) Chloroplast 50S ribosomal protein L14,InterPro: Ribosomal protein L14b/L23e,Ribosomal protein L14 bacterial and organelle form; Conserved hypothetical protein; 50S ribosomal protein L14 1741353 rplN 7552060 rplN Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L14 YP_002634816.1 1740985 R 396513 CDS YP_002634817.1 224477211 7552051 complement(1741383..1741646) 1 NC_012121.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1741646 rpsQ 7552051 rpsQ Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S17 YP_002634817.1 1741383 R 396513 CDS YP_002634818.1 224477212 7552091 complement(1741672..1741881) 1 NC_012121.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1741881 rpmC 7552091 rpmC Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L29 YP_002634818.1 1741672 R 396513 CDS YP_002634819.1 224477213 7552064 complement(1741871..1742305) 1 NC_012121.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1742305 rplP 7552064 rplP Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L16 YP_002634819.1 1741871 R 396513 CDS YP_002634820.1 224477214 7552053 complement(1742308..1742961) 1 NC_012121.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1742961 rpsC 7552053 rpsC Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S3 YP_002634820.1 1742308 R 396513 CDS YP_002634821.1 224477215 7552076 complement(1742985..1743338) 1 NC_012121.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1743338 rplV 7552076 rplV Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L22 YP_002634821.1 1742985 R 396513 CDS YP_002634822.1 224477216 7552058 complement(1743371..1743649) 1 NC_012121.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1743649 rpsS 7552058 rpsS Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S19 YP_002634822.1 1743371 R 396513 CDS YP_002634823.1 224477217 7552093 complement(1743714..1744547) 1 NC_012121.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1744547 rplB 7552093 rplB Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L2 YP_002634823.1 1743714 R 396513 CDS YP_002634824.1 224477218 7552041 complement(1744585..1744860) 1 NC_012121.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1744860 rplW 7552041 rplW Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L23 YP_002634824.1 1744585 R 396513 CDS YP_002634825.1 224477219 7552059 complement(1744860..1745483) 1 NC_012121.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1745483 rplD 7552059 rplD Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L4 YP_002634825.1 1744860 R 396513 CDS YP_002634826.1 224477220 7552043 complement(1745512..1746174) 1 NC_012121.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1746174 rplC 7552043 rplC Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L3 YP_002634826.1 1745512 R 396513 CDS YP_002634827.1 224477221 7552042 complement(1746202..1746510) 1 NC_012121.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1746510 rpsJ 7552042 rpsJ Staphylococcus carnosus subsp. carnosus TM300 30S ribosomal protein S10 YP_002634827.1 1746202 R 396513 CDS YP_002634828.1 224477222 7552083 1746850..1747236 1 NC_012121.1 (Q07429) Ammonium transporter nrgA (Membrane protein nrgA) (Protein amtB); Hypothetical protein; hypothetical protein 1747236 7552083 Sca_1737 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634828.1 1746850 D 396513 CDS YP_002634829.1 224477223 7550793 complement(1747315..1747740) 1 NC_012121.1 similar to acetyltransferase, GNAT family,(P16691) PhnO protein,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 1747740 7550793 Sca_1738 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634829.1 1747315 R 396513 CDS YP_002634830.1 224477224 7550794 complement(1747829..1749163) 1 NC_012121.1 (P31440) Hypothetical protein yicO,InterPro: Xanthine/uracil/vitamin C permease family; Hypothetical protein; hypothetical protein 1749163 7550794 Sca_1739 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634830.1 1747829 R 396513 CDS YP_002634831.1 224477225 7550795 complement(1749375..1751504) 1 NC_012121.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 1751504 topB 7550795 topB Staphylococcus carnosus subsp. carnosus TM300 DNA topoisomerase III YP_002634831.1 1749375 R 396513 CDS YP_002634832.1 224477226 7552195 1751652..1752515 1 NC_012121.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 1752515 7552195 Sca_1741 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634832.1 1751652 D 396513 CDS YP_002634833.1 224477227 7550796 1752640..1753494 1 NC_012121.1 (O07881) Glucose uptake protein glcU,InterPro: RhaT l-rhamnose-proton symport; Hypothetical protein; glucose uptake protein 1753494 glcU 7550796 glcU Staphylococcus carnosus subsp. carnosus TM300 glucose uptake protein YP_002634833.1 1752640 D 396513 CDS YP_002634834.1 224477228 7551633 1753537..1754328 1 NC_012121.1 (P39483) Glucose 1-dehydrogenase II (EC 1.1.1.47) (GLCDH-II),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative glucose 1-dehydrogenase 1754328 gdh 7551633 gdh Staphylococcus carnosus subsp. carnosus TM300 putative glucose 1-dehydrogenase YP_002634834.1 1753537 D 396513 CDS YP_002634835.1 224477229 7551621 complement(1754430..1755338) 1 NC_012121.1 (P76519) Hypothetical protein yfdV,InterPro: Auxin Efflux Carrier; Conserved hypothetical protein; hypothetical protein 1755338 7551621 Sca_1744 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634835.1 1754430 R 396513 CDS YP_002634836.1 224477230 7550797 1755461..1755631 1 NC_012121.1 (Q63665) Upstream stimulatory factor 2 (Upstream transcription factor 2) (Major late transcription factor 2) (Fragment); Hypothetical protein; hypothetical protein 1755631 7550797 Sca_1745 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634836.1 1755461 D 396513 CDS YP_002634837.1 224477231 7550798 1755696..1756013 1 NC_012121.1 Hypothetical protein; hypothetical protein 1756013 7550798 Sca_1746 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634837.1 1755696 D 396513 CDS YP_002634838.1 224477232 7550799 complement(1756053..1757216) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1757216 7550799 Sca_1747 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634838.1 1756053 R 396513 CDS YP_002634839.1 224477233 7550800 complement(1757236..1758414) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1758414 7550800 Sca_1748 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634839.1 1757236 R 396513 CDS YP_002634840.1 224477234 7550801 complement(1758642..1761800) 1 NC_012121.1 hypothetical protein, similar to acriflavin resistance protein,putative transporter (AcrB/AcrD/AcrF family protein),(P25197) Nodulation protein nolG precursor,InterPro: Acriflavin resistance protein; Hypothetical protein; hypothetical protein 1761800 7550801 Sca_1749 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634840.1 1758642 R 396513 CDS YP_002634841.1 224477235 7550802 complement(1761956..1763206) 1 NC_012121.1 (P14305) Protein femB,InterPro: Methicillin resistance protein; Hypothetical protein; putative FmhB protein 1763206 fmhB 7550802 fmhB Staphylococcus carnosus subsp. carnosus TM300 putative FmhB protein YP_002634841.1 1761956 R 396513 CDS YP_002634842.1 224477236 7551582 1763319..1763579 1 NC_012121.1 Hypothetical protein; hypothetical protein 1763579 7551582 Sca_1751 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634842.1 1763319 D 396513 CDS YP_002634843.1 224477237 7550803 complement(1763576..1764331) 1 NC_012121.1 (Q14203) Dynactin 1 (150 kDa dynein-associated polypeptide) (DP-150) (DAP-150) (p150-glued) (p135); Hypothetical protein; hypothetical protein 1764331 7550803 Sca_1752 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634843.1 1763576 R 396513 CDS YP_002634844.1 224477238 7550804 1764599..1765015 1 NC_012121.1 (P62087) Putative HTH-type transcriptional regulator SA2060,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; hypothetical protein 1765015 7550804 Sca_1753 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634844.1 1764599 D 396513 CDS YP_002634845.1 224477239 7550805 1765029..1766225 1 NC_012121.1 similar to transporter proteins,(Q8Z4Z9) Hypothetical UPF0226 protein yfcJ,InterPro: Major facilitator superfamily; Hypothetical protein; hypothetical protein 1766225 7550805 Sca_1754 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634845.1 1765029 D 396513 CDS YP_002634846.1 224477240 7550806 1766639..1766980 1 NC_012121.1 (O07127) Hypothetical 16.5 kDa protein in ptsI 3region (ORFY); Hypothetical protein; hypothetical protein 1766980 7550806 Sca_1755 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634846.1 1766639 D 396513 CDS YP_002634847.1 224477241 7550807 complement(1767083..1768105) 1 NC_012121.1 Hypothetical protein; Molybdenum cofactor biosynthesis protein A 1768105 moaA 7550807 moaA Staphylococcus carnosus subsp. carnosus TM300 Molybdenum cofactor biosynthesis protein A YP_002634847.1 1767083 R 396513 CDS YP_002634848.1 224477242 7551792 complement(1768164..1768757) 1 NC_012121.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 1768757 mobA 7551792 mobA Staphylococcus carnosus subsp. carnosus TM300 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_002634848.1 1768164 R 396513 CDS YP_002634849.1 224477243 7551797 complement(1768762..1768995) 1 NC_012121.1 Hypothetical protein; MoaD 1768995 moaD 7551797 moaD Staphylococcus carnosus subsp. carnosus TM300 MoaD YP_002634849.1 1768762 R 396513 CDS YP_002634850.1 224477244 7551795 complement(1768995..1769447) 1 NC_012121.1 Hypothetical protein; MoaE 1769447 moaE 7551795 moaE Staphylococcus carnosus subsp. carnosus TM300 MoaE YP_002634850.1 1768995 R 396513 CDS YP_002634851.1 224477245 7551796 complement(1769444..1769926) 1 NC_012121.1 Hypothetical protein; MobB 1769926 mobB 7551796 mobB Staphylococcus carnosus subsp. carnosus TM300 MobB YP_002634851.1 1769444 R 396513 CDS YP_002634852.1 224477246 7551798 complement(1769923..1771182) 1 NC_012121.1 Hypothetical protein; molybdopterin biosynthesis protein MoeA 1771182 moeA 7551798 moeA Staphylococcus carnosus subsp. carnosus TM300 molybdopterin biosynthesis protein MoeA YP_002634852.1 1769923 R 396513 CDS YP_002634853.1 224477247 7551803 1771247..1771732 1 NC_012121.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1771732 moaC 7551803 moaC Staphylococcus carnosus subsp. carnosus TM300 molybdenum cofactor biosynthesis protein MoaC YP_002634853.1 1771247 D 396513 CDS YP_002634854.1 224477248 7551794 complement(1771916..1772428) 1 NC_012121.1 Conserved hypothetical protein; Molybdenum cofactor biosynthesis protein B 1772428 moaB 7551794 moaB Staphylococcus carnosus subsp. carnosus TM300 Molybdenum cofactor biosynthesis protein B YP_002634854.1 1771916 R 396513 CDS YP_002634855.1 224477249 7551793 complement(1772460..1773461) 1 NC_012121.1 (P38820) Hypothetical 49.4 kDa protein in CDC12-ORC6 intergenic region,InterPro: UBA/THIF-type NAD/FAD binding fold; Conserved hypothetical protein; putative molybdopterin biosynthesis protein moeB 1773461 moeB 7551793 moeB Staphylococcus carnosus subsp. carnosus TM300 putative molybdopterin biosynthesis protein moeB YP_002634855.1 1772460 R 396513 CDS YP_002634856.1 224477250 7551804 complement(1773613..1774221) 1 NC_012121.1 ATP-binding protein of the molybdate-specific ABC,transporter ModABC; Conserved hypothetical protein; molybdenum transport ATP-binding protein ModC 1774221 modC 7551804 modC Staphylococcus carnosus subsp. carnosus TM300 molybdenum transport ATP-binding protein ModC YP_002634856.1 1773613 R 396513 CDS YP_002634857.1 224477251 7551802 complement(1774222..1774893) 1 NC_012121.1 integral membrane-spanning protein of the,molybdate-specific ABC transporter ModABC; Conserved hypothetical protein; molybdenum transport system permease ModB 1774893 modB 7551802 modB Staphylococcus carnosus subsp. carnosus TM300 molybdenum transport system permease ModB YP_002634857.1 1774222 R 396513 CDS YP_002634858.1 224477252 7551801 complement(1774905..1775690) 1 NC_012121.1 molybdate-binding lipoprotein of the,molybdate-specific ABC transporter ModABC,(P37329) Molybdate-binding periplasmic protein precursor,InterPro: Bacterial extracellular solute-binding protein family 1; Conserved hypothetical protein; molybdate-binding protein ModA 1775690 modA 7551801 modA Staphylococcus carnosus subsp. carnosus TM300 molybdate-binding protein ModA YP_002634858.1 1774905 R 396513 CDS YP_002634859.1 224477253 7551800 complement(1775850..1777346) 1 NC_012121.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase 1777346 galT 7551800 galT Staphylococcus carnosus subsp. carnosus TM300 galactose-1-phosphate uridylyltransferase YP_002634859.1 1775850 R 396513 CDS YP_002634860.1 224477254 7551608 complement(1777364..1778353) 1 NC_012121.1 UDP-glucose-4-epimerase,(Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase),InterPro: UDP-glucose 4-epimerase; Conserved hypothetical protein; UDP-glucose-4-epimerase GalE 1778353 galE 7551608 galE Staphylococcus carnosus subsp. carnosus TM300 UDP-glucose-4-epimerase GalE YP_002634860.1 1777364 R 396513 CDS YP_002634861.1 224477255 7551605 complement(1778374..1779540) 1 NC_012121.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 1779540 galK 7551605 galK Staphylococcus carnosus subsp. carnosus TM300 galactokinase YP_002634861.1 1778374 R 396513 CDS YP_002634862.1 224477256 7551606 complement(1779630..1780628) 1 NC_012121.1 Galactose operon repressor; Conserved hypothetical protein; Galactose operon repressor GalR 1780628 galR 7551606 galR Staphylococcus carnosus subsp. carnosus TM300 Galactose operon repressor GalR YP_002634862.1 1779630 R 396513 CDS YP_002634863.1 224477257 7551607 1780774..1781595 1 NC_012121.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 1781595 7551607 Sca_1773 Staphylococcus carnosus subsp. carnosus TM300 formate dehydrogenase accessory protein YP_002634863.1 1780774 D 396513 CDS YP_002634864.1 224477258 7550808 complement(1781622..1782377) 1 NC_012121.1 similar to acetyltransferase (GNAT) family protein,(P37504) Hypothetical protein yyaT,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 1782377 7550808 Sca_1774 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634864.1 1781622 R 396513 CDS YP_002634865.1 224477259 7550809 complement(1782405..1782956) 1 NC_012121.1 similar to biotin biosynthesis protein,(P22819) Protein bioY,InterPro: BioY protein; Conserved hypothetical protein; hypothetical protein 1782956 7550809 Sca_1775 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634865.1 1782405 R 396513 CDS YP_002634866.1 224477260 7550810 complement(1783055..1783999) 1 NC_012121.1 (P33022) Hypothetical protein yeiK,InterPro: Inosine/uridine-preferring nucleoside hydrolase; Conserved hypothetical protein; putative inosine-uridine preferring nucleoside hydrolase 1783999 7550810 Sca_1776 Staphylococcus carnosus subsp. carnosus TM300 putative inosine-uridine preferring nucleoside hydrolase YP_002634866.1 1783055 R 396513 CDS YP_002634867.1 224477261 7550811 1784221..1785369 1 NC_012121.1 similar to butyryl-CoA dehydrogenase,(P52042) Acyl-CoA dehydrogenase short-chain specific (EC 1.3.99.2) (SCAD) (Butyryl-CoA dehydrogenase),InterPro: Acyl-CoA dehydrogenase C-terminal; Conserved hypothetical protein; hypothetical protein 1785369 7550811 Sca_1777 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634867.1 1784221 D 396513 CDS YP_002634868.1 224477262 7550812 1785598..1786512 1 NC_012121.1 similar to ferrichrome ABC transporter fhuD precursor,(P37580) Ferrichrome-binding protein precursor,InterPro: Periplasmic binding protein; Conserved hypothetical protein; putative ferrichrome binding protein 1786512 7550812 Sca_1778 Staphylococcus carnosus subsp. carnosus TM300 putative ferrichrome binding protein YP_002634868.1 1785598 D 396513 CDS YP_002634869.1 224477263 7550813 complement(1786581..1787522) 1 NC_012121.1 similar to urea transporter,(Q13336) Urea transporter erythrocyte,InterPro: Urea transporter; Conserved hypothetical protein; hypothetical protein 1787522 7550813 Sca_1779 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634869.1 1786581 R 396513 CDS YP_002634870.1 224477264 7550814 1787827..1788129 1 NC_012121.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 1788129 ureA 7550814 ureA Staphylococcus carnosus subsp. carnosus TM300 urease subunit gamma YP_002634870.1 1787827 D 396513 CDS YP_002634871.1 224477265 7552283 1788146..1788559 1 NC_012121.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Staphylococcus saprophyticus plays a role in bladder invasiveness and may induce the formation of kidney and bladder stones due to the alkalization of urine; urease subunit beta 1788559 ureB 7552283 ureB Staphylococcus carnosus subsp. carnosus TM300 urease subunit beta YP_002634871.1 1788146 D 396513 CDS YP_002634872.1 224477266 7552284 1788556..1790271 1 NC_012121.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1790271 ureC 7552284 ureC Staphylococcus carnosus subsp. carnosus TM300 urease subunit alpha YP_002634872.1 1788556 D 396513 CDS YP_002634873.1 224477267 7552285 1790287..1790739 1 NC_012121.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 1790739 ureE 7552285 ureE Staphylococcus carnosus subsp. carnosus TM300 urease accessory protein UreE YP_002634873.1 1790287 D 396513 CDS YP_002634874.1 224477268 7552287 1790732..1791421 1 NC_012121.1 (Q07402) Urease accessory protein ureF,InterPro: Urease accessory protein UreF; Conserved hypothetical protein; urease accessory protein UreF 1791421 ureF 7552287 ureF Staphylococcus carnosus subsp. carnosus TM300 urease accessory protein UreF YP_002634874.1 1790732 D 396513 CDS YP_002634875.1 224477269 7552288 1791434..1792048 1 NC_012121.1 (P42877) Urease accessory protein ureG,InterPro: Urease accessory protein UreG; Conserved hypothetical protein; urease accessory protein UreG 1792048 ureG 7552288 ureG Staphylococcus carnosus subsp. carnosus TM300 urease accessory protein UreG YP_002634875.1 1791434 D 396513 CDS YP_002634876.1 224477270 7552289 1792048..1792887 1 NC_012121.1 (Q07400) Urease accessory protein ureD,InterPro: Urease accessory protein UreD; Conserved hypothetical protein; urease accessory protein UreD 1792887 ureD 7552289 ureD Staphylococcus carnosus subsp. carnosus TM300 urease accessory protein UreD YP_002634876.1 1792048 D 396513 CDS YP_002634877.1 224477271 7552286 complement(1793051..1793407) 1 NC_012121.1 (O83536) ATP-dependent protease La (EC 3.4.21.53); Hypothetical protein; putative accessory regulator A 1793407 sarR 7552286 sarR Staphylococcus carnosus subsp. carnosus TM300 putative accessory regulator A YP_002634877.1 1793051 R 396513 CDS YP_002634878.1 224477272 7552105 complement(1793741..1794106) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1794106 7552105 Sca_1788 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634878.1 1793741 R 396513 CDS YP_002634879.1 224477273 7550815 complement(1794125..1795174) 1 NC_012121.1 (Q53218) Hypothetical 39.2 kDa protein y4vJ,InterPro: Bacterial luciferase,Note: Sequence published by Krismer,B., Montenbruck,I. and Goetz,F.(: Direct Submission; Submitted (02-APR-1997) Institut fuer Mikrobielle Genetik, Universitaet Tuebingen,Waldhaeuserstr. 70/8, Tuebingen 72076, Germany) is N-terminally prolonged by 48 aa.; Hypothetical protein; N5, N10-methylenetetrahydromethanopterin reductase 1795174 7550815 Sca_1789 Staphylococcus carnosus subsp. carnosus TM300 N5, N10-methylenetetrahydromethanopterin reductase YP_002634879.1 1794125 R 396513 CDS YP_002634880.1 224477274 7550816 1795820..1796611 1 NC_012121.1 major secreted protein; Hypothetical protein; SceB protein 1796611 sceB 7550816 sceB Staphylococcus carnosus subsp. carnosus TM300 SceB protein YP_002634880.1 1795820 D 396513 CDS YP_002634881.1 224477275 7552108 complement(1796785..1797288) 1 NC_012121.1 former orf4; Hypothetical protein; putative transmembrane protein 1797288 7552108 Sca_1791 Staphylococcus carnosus subsp. carnosus TM300 putative transmembrane protein YP_002634881.1 1796785 R 396513 CDS YP_002634882.1 224477276 7550817 complement(1797607..1798986) 1 NC_012121.1 (P27611) Na(+)/H(+) antiporter (Sodium/proton antiporter) (Sodium/hydrogen antiporter),InterPro: Na+/H+ antiporter NhaC; Hypothetical protein; putative Na+/H+ antiporter 1798986 7550817 Sca_1792 Staphylococcus carnosus subsp. carnosus TM300 putative Na+/H+ antiporter YP_002634882.1 1797607 R 396513 CDS YP_002634883.1 224477277 7550818 complement(1799008..1800078) 1 NC_012121.1 (P00385) OCS protein [Includes: D-lysopine dehydrogenase (EC 1.5.1.16) (Lysopine synthase); D-octopine dehydrogenase (EC 1.5.1.11) (Octopine synthase)],InterPro: NAD/NADP octopine/nopaline dehydrogenase; Conserved hypothetical protein; putative D-octopine dehydrogenase 1800078 7550818 Sca_1793 Staphylococcus carnosus subsp. carnosus TM300 putative D-octopine dehydrogenase YP_002634883.1 1799008 R 396513 CDS YP_002634884.1 224477278 7550819 1800520..1800900 1 NC_012121.1 (Q58838) Hypothetical UPF0132 protein MJ1443; Hypothetical protein; hypothetical protein 1800900 7550819 Sca_1794 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634884.1 1800520 D 396513 CDS YP_002634885.1 224477279 7550820 1801024..1801356 1 NC_012121.1 (P49856) Hypothetical protein ykkC,InterPro: Small multidrug resistance protein; Hypothetical protein; hypothetical protein 1801356 7550820 Sca_1795 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634885.1 1801024 D 396513 CDS YP_002634886.1 224477280 7550821 1801356..1801670 1 NC_012121.1 (P49857) Hypothetical protein ykkD,InterPro: Small multidrug resistance protein; High confidence in function and specificity; hypothetical protein 1801670 7550821 Sca_1796 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634886.1 1801356 D 396513 CDS YP_002634887.1 224477281 7550822 1801752..1802723 1 NC_012121.1 (Q8U3Y2) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein; putative glycerate dehydrogenase 1802723 7550822 Sca_1797 Staphylococcus carnosus subsp. carnosus TM300 putative glycerate dehydrogenase YP_002634887.1 1801752 D 396513 CDS YP_002634888.1 224477282 7550823 complement(1802788..1803912) 1 NC_012121.1 similar to monooxygenase,(P93236) Zeaxanthin epoxidase chloroplast precursor (EC 1.14.-.-),InterPro: Flavoprotein monooxygenase; Hypothetical protein; hypothetical protein 1803912 7550823 Sca_1798 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634888.1 1802788 R 396513 CDS YP_002634889.1 224477283 7550824 complement(1804015..1804794) 1 NC_012121.1 similar to autolysin E,(P52081) Bifunctional autolysin precursor [Includes: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28); Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (EC 3.2.1.96)],InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Hypothetical protein; hypothetical protein 1804794 7550824 Sca_1799 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634889.1 1804015 R 396513 CDS YP_002634890.1 224477284 7550825 complement(1804816..1805067) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1805067 7550825 Sca_1800 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634890.1 1804816 R 396513 CDS YP_002634891.1 224477285 7550826 complement(1805191..1805631) 1 NC_012121.1 (O05396) Hypothetical protein yrhD; Hypothetical protein; hypothetical protein 1805631 7550826 Sca_1801 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634891.1 1805191 R 396513 CDS YP_002634892.1 224477286 7550827 complement(1805654..1808614) 1 NC_012121.1 similar to putative bifunctional protein (Staphylococcus aureus subsp. aureus MRSA252),(P61159) Formate dehydrogenase alpha chain (EC 1.2.1.2),InterPro: Formate dehydrogenase alpha subunit; Hypothetical protein; putative formate dehydrogenase 1808614 7550827 Sca_1802 Staphylococcus carnosus subsp. carnosus TM300 putative formate dehydrogenase YP_002634892.1 1805654 R 396513 CDS YP_002634893.1 224477287 7550828 1808692..1808811 1 NC_012121.1 Hypothetical protein; hypothetical protein 1808811 7550828 Sca_1803 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634893.1 1808692 D 396513 CDS YP_002634894.1 224477288 7550829 complement(1809199..1809501) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1809501 7550829 Sca_1804 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634894.1 1809199 R 396513 CDS YP_002634895.1 224477289 7550830 complement(1809631..1810587) 1 NC_012121.1 similar to lyt divergon expression attenuator LytR,(Q81K33) Membrane-bound protein lytR,InterPro: Cell envelope-related transcriptional attenuator; Hypothetical protein; hypothetical protein 1810587 7550830 Sca_1805 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634895.1 1809631 R 396513 CDS YP_002634896.1 224477290 7550831 complement(1810674..1811483) 1 NC_012121.1 (Q45499) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase) (Inositol-1-phosphatase) (I-1-Pase),InterPro: Inositol monophosphatase; Conserved hypothetical protein; hypothetical protein 1811483 7550831 Sca_1806 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634896.1 1810674 R 396513 CDS YP_002634897.1 224477291 7550832 1811882..1812580 1 NC_012121.1 (P52598) Putative HTH-type transcriptional regulator ygbI,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein; hypothetical protein 1812580 7550832 Sca_1807 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634897.1 1811882 D 396513 CDS YP_002634898.1 224477292 7550833 complement(1812643..1813359) 1 NC_012121.1 InterPro: Abortive infection protein; Hypothetical protein; hypothetical protein 1813359 7550833 Sca_1808 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634898.1 1812643 R 396513 CDS YP_002634899.1 224477293 7550834 1813464..1813811 1 NC_012121.1 Hypothetical protein; hypothetical protein 1813811 7550834 Sca_1809 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634899.1 1813464 D 396513 CDS YP_002634900.1 224477294 7550835 1814096..1814668 1 NC_012121.1 (O68281) HTH-type transcriptional regulator hexR (Hex regulon repressor),InterPro: Helix-turn-helix protein RpiR,Similar to N-terminus of putative transcriptional regulator [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300683); Hypothetical protein; hypothetical protein 1814668 7550835 Sca_1810 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634900.1 1814096 D 396513 CDS YP_002634901.1 224477295 7550836 1814619..1814969 1 NC_012121.1 Similar to C-terminal part of putative transcriptional regulator [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300683),(Q45581) Putative HTH-type transcriptional regulator ybbH; Hypothetical protein; hypothetical protein 1814969 7550836 Sca_1811 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634901.1 1814619 D 396513 CDS YP_002634902.1 224477296 7550837 complement(1815015..1816406) 1 NC_012121.1 (P54425) Hypothetical transport protein ybxG,InterPro: Amino acid permease-associated region; Hypothetical protein; putative amino acid transporter 1816406 7550837 Sca_1812 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid transporter YP_002634902.1 1815015 R 396513 CDS YP_002634903.1 224477297 7550838 complement(1816464..1816562) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1816562 7550838 Sca_1813 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634903.1 1816464 R 396513 CDS YP_002634904.1 224477298 7550839 1817123..1817944 1 NC_012121.1 similar to formate/nitrite transporter,(P38750) Hypothetical 70.0 kDa protein in PRPS4-STE20 intergenic region,InterPro: Formate/nitrite transporter; Hypothetical protein; hypothetical protein 1817944 7550839 Sca_1814 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634904.1 1817123 D 396513 CDS YP_002634905.1 224477299 7550840 1818011..1818364 1 NC_012121.1 (P41656) Hypothetical 19.8 kDa protein in P143-LEF5 intergenic region; Hypothetical protein; hypothetical protein 1818364 7550840 Sca_1815 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634905.1 1818011 D 396513 CDS YP_002634906.1 224477300 7550841 1818361..1818543 1 NC_012121.1 Hypothetical protein; hypothetical protein 1818543 7550841 Sca_1816 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634906.1 1818361 D 396513 CDS YP_002634907.1 224477301 7550842 complement(1818598..1818780) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1818780 7550842 Sca_1817 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634907.1 1818598 R 396513 CDS YP_002634908.1 224477302 7550843 complement(1818793..1819428) 1 NC_012121.1 similar to haloacid dehalogenase-like hydrolase,(P54607) Hypothetical protein yhcW,InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein; hypothetical protein 1819428 7550843 Sca_1818 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634908.1 1818793 R 396513 CDS YP_002634909.1 224477303 7550844 1819647..1820183 1 NC_012121.1 (Q9XDH6) DNA polymerase III alpha subunit (EC 2.7.7.7); Hypothetical protein; hypothetical protein 1820183 7550844 Sca_1819 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634909.1 1819647 D 396513 CDS YP_002634910.1 224477304 7550845 1820806..1822161 1 NC_012121.1 (P08194) Glycerol-3-phosphate transporter (G-3-P transporter) (G-3-P permease),InterPro: Glycerol-3-phosphate transporter; Conserved hypothetical protein; glycerol-3-phosphate transporter 1822161 glpT 7550845 glpT Staphylococcus carnosus subsp. carnosus TM300 glycerol-3-phosphate transporter YP_002634910.1 1820806 D 396513 CDS YP_002634911.1 224477305 7551646 complement(1822220..1822741) 1 NC_012121.1 (Q8VEE1) LIM and cysteine-rich domains protein,InterPro: Protein of unknown function DUF704; Hypothetical protein; hypothetical protein 1822741 7551646 Sca_1821 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634911.1 1822220 R 396513 CDS YP_002634912.1 224477306 7550846 complement(1822900..1824306) 1 NC_012121.1 similar to Na+/H+ antiporter,(P54571) Malate-2H(+)/Na(+)-lactate antiporter,InterPro: Na+/H+ antiporter NhaC; Hypothetical protein; putative transport protein 1824306 7550846 Sca_1822 Staphylococcus carnosus subsp. carnosus TM300 putative transport protein YP_002634912.1 1822900 R 396513 CDS YP_002634913.1 224477307 7550847 complement(1824477..1825088) 1 NC_012121.1 (O05220) Hypothetical protein ywrF; Hypothetical protein; hypothetical protein 1825088 7550847 Sca_1823 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634913.1 1824477 R 396513 CDS YP_002634914.1 224477308 7550848 complement(1825269..1826150) 1 NC_012121.1 (P25887) Hypothetical oxidoreductase yghA (EC 1.-.-.-),InterPro: Short-chain dehydrogenase/reductase SDR; Conserved hypothetical protein; putative short chain dehydrogenase 1826150 7550848 Sca_1824 Staphylococcus carnosus subsp. carnosus TM300 putative short chain dehydrogenase YP_002634914.1 1825269 R 396513 CDS YP_002634915.1 224477309 7550849 complement(1826220..1827335) 1 NC_012121.1 (P54955) Hypothetical protein yxeP,InterPro: Peptidase M20/M25/M40; Conserved hypothetical protein; putative amino acid amidohydrolase 1827335 7550849 Sca_1825 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid amidohydrolase YP_002634915.1 1826220 R 396513 CDS YP_002634916.1 224477310 7550850 complement(1827313..1828506) 1 NC_012121.1 Hypothetical protein; putative sulfate permease 1828506 7550850 Sca_1826 Staphylococcus carnosus subsp. carnosus TM300 putative sulfate permease YP_002634916.1 1827313 R 396513 CDS YP_002634917.1 224477311 7550851 complement(1828656..1829918) 1 NC_012121.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 1829918 hutI 7550851 hutI Staphylococcus carnosus subsp. carnosus TM300 imidazolonepropionase YP_002634917.1 1828656 R 396513 CDS YP_002634918.1 224477312 7551710 complement(1829911..1831599) 1 NC_012121.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1831599 hutU 7551710 hutU Staphylococcus carnosus subsp. carnosus TM300 urocanate hydratase YP_002634918.1 1829911 R 396513 CDS YP_002634919.1 224477313 7551711 complement(1831630..1832988) 1 NC_012121.1 (P30267) Hypothetical 50.9 kDa protein in katA 3region (ORF A); Hypothetical protein; hypothetical protein 1832988 7551711 Sca_1829 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634919.1 1831630 R 396513 CDS YP_002634920.1 224477314 7550852 1833560..1834438 1 NC_012121.1 similar to transcriptional regulator LysR family protein,(P39592) Putative HTH-type transcriptional regulator ywbI,InterPro: LysR substrate binding domain; Hypothetical protein; putative transcriptional regulator 1834438 7550852 Sca_1830 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002634920.1 1833560 D 396513 CDS YP_002634921.1 224477315 7550853 complement(1834533..1835462) 1 NC_012121.1 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase 1835462 7550853 Sca_1831 Staphylococcus carnosus subsp. carnosus TM300 formimidoylglutamase YP_002634921.1 1834533 R 396513 CDS YP_002634922.1 224477316 7550854 1835859..1836935 1 NC_012121.1 C terminal 298 AA similar to Staph epidermidis conserved protein; Hypothetical protein; hypothetical protein 1836935 7550854 Sca_1832 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634922.1 1835859 D 396513 CDS YP_002634923.1 224477317 7550855 complement(1836993..1837676) 1 NC_012121.1 catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1837676 rpi 7550855 rpi Staphylococcus carnosus subsp. carnosus TM300 ribose-5-phosphate isomerase A YP_002634923.1 1836993 R 396513 CDS YP_002634924.1 224477318 7552039 complement(1837700..1838719) 1 NC_012121.1 (P40681) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase),InterPro: Aldose 1-epimerase; Hypothetical protein; putative aldose 1-epimerase 1838719 7552039 Sca_1834 Staphylococcus carnosus subsp. carnosus TM300 putative aldose 1-epimerase YP_002634924.1 1837700 R 396513 CDS YP_002634925.1 224477319 7550856 complement(1838755..1839081) 1 NC_012121.1 (Q99RT4) Hypothetical UPF0060 protein SAV2339/SA2130/MW2259,InterPro: Protein of unknown function UPF0060; Hypothetical protein; hypothetical protein 1839081 7550856 Sca_1835 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634925.1 1838755 R 396513 CDS YP_002634926.1 224477320 7550857 complement(1839207..1840436) 1 NC_012121.1 (O07523) Hypothetical protein yhaP; Hypothetical protein; hypothetical protein 1840436 7550857 Sca_1836 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634926.1 1839207 R 396513 CDS YP_002634927.1 224477321 7550858 complement(1840429..1841328) 1 NC_012121.1 (P26946) Hypothetical ABC transporter ATP-binding protein,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 1841328 7550858 Sca_1837 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002634927.1 1840429 R 396513 CDS YP_002634928.1 224477322 7550859 complement(1841451..1842161) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1842161 7550859 Sca_1838 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634928.1 1841451 R 396513 CDS YP_002634929.1 224477323 7550860 complement(1842178..1842384) 1 NC_012121.1 (O28481) Putative HTH-type transcriptional regulator AF1793,InterPro: Helix-turn-helix motif; Hypothetical protein; putative transcriptional regulator 1842384 7550860 Sca_1839 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002634929.1 1842178 R 396513 CDS YP_002634930.1 224477324 7550861 complement(1842531..1843148) 1 NC_012121.1 (P42621) Hypothetical protein yhaH,InterPro: Protein of unknown function DUF805; Hypothetical protein; hypothetical protein 1843148 7550861 Sca_1840 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634930.1 1842531 R 396513 CDS YP_002634931.1 224477325 7550862 complement(<1843196..1843678) 1 NC_012121.1 similar to aa 1 - 167 of hypothetical protein SSP0562 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300652),Note: this protein is similar to the same database best hit as Sca_1841 and Sca_1842.; Hypothetical protein; hypothetical protein 1843678 7550862 Sca_1840a Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634931.1 <1843196 R 396513 CDS YP_002634932.1 224477326 7550863 complement(1843663..1843932) 1 NC_012121.1 Similar to aa 113 - 173 of hypothetical protein SSP0562 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300652) length 232 aa; Hypothetical protein; hypothetical protein 1843932 7550863 Sca_1841 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634932.1 1843663 R 396513 CDS YP_002634933.1 224477327 7550864 complement(1843910..1844233) 1 NC_012121.1 (P42621) Hypothetical protein yhaH,InterPro: Protein of unknown function DUF805,Similar to N-terminal part of hypothetical protein SSP0562 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300652): aa 1 - 105; Hypothetical protein; hypothetical protein 1844233 7550864 Sca_1842 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634933.1 1843910 R 396513 CDS YP_002634934.1 224477328 7550865 1844528..1845148 1 NC_012121.1 (Q8CRC1) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-),InterPro: Methylpurine-DNA glycosylase (MPG); Conserved hypothetical protein; putative 3-methyladenine DNA glycosylase 1845148 7550865 Sca_1843 Staphylococcus carnosus subsp. carnosus TM300 putative 3-methyladenine DNA glycosylase YP_002634934.1 1844528 D 396513 CDS YP_002634935.1 224477329 7550866 complement(1845248..1845718) 1 NC_012121.1 (P45080) Anaerobic ribonucleoside-triphosphate reductase activating protein (EC 1.97.1.4) (Class III anaerobic ribonucleotide reductase small component); Conserved hypothetical protein; putative anaerobic ribonucleotide reductase activating protein 1845718 nrdG 7550866 nrdG Staphylococcus carnosus subsp. carnosus TM300 putative anaerobic ribonucleotide reductase activating protein YP_002634935.1 1845248 R 396513 CDS YP_002634936.1 224477330 7551863 complement(1845718..1847571) 1 NC_012121.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1847571 nrdD 7551863 nrdD Staphylococcus carnosus subsp. carnosus TM300 anaerobic ribonucleoside triphosphate reductase YP_002634936.1 1845718 R 396513 CDS YP_002634937.1 224477331 7551860 complement(1847760..1848203) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1848203 7551860 Sca_1846 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634937.1 1847760 R 396513 CDS YP_002634938.1 224477332 7550867 complement(1848568..1849710) 1 NC_012121.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 1849710 fni 7550867 fni Staphylococcus carnosus subsp. carnosus TM300 isopentenyl pyrophosphate isomerase YP_002634938.1 1848568 R 396513 CDS YP_002634939.1 224477333 7551584 complement(1849707..1850654) 1 NC_012121.1 similar to divalent cation transport ,(P43553) Aluminum resistance protein,InterPro: Magnesium and cobalt transport protein CorA; Hypothetical protein; hypothetical protein 1850654 7551584 Sca_1848 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634939.1 1849707 R 396513 CDS YP_002634940.1 224477334 7550868 1850765..1851247 1 NC_012121.1 (Q8NZJ4) N utilization substance protein B homolog (NusB protein); Hypothetical protein; hypothetical protein 1851247 7550868 Sca_1849 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634940.1 1850765 D 396513 CDS YP_002634941.1 224477335 7550869 1851244..1851684 1 NC_012121.1 (P06739) Hemolysin secretion protein D plasmid; Hypothetical protein; hypothetical protein 1851684 7550869 Sca_1850 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634941.1 1851244 D 396513 CDS YP_002634942.1 224477336 7550870 1851730..1852368 1 NC_012121.1 Hypothetical protein; hypothetical protein 1852368 7550870 Sca_1851 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634942.1 1851730 D 396513 CDS YP_002634943.1 224477337 7550871 complement(1852528..1854444) 1 NC_012121.1 similar to multidrug resistance proteins,(P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Hypothetical protein; putative transport protein 1854444 7550871 Sca_1852 Staphylococcus carnosus subsp. carnosus TM300 putative transport protein YP_002634943.1 1852528 R 396513 CDS YP_002634944.1 224477338 7550872 complement(1854457..1855104) 1 NC_012121.1 (P76185) Hypothetical protein ydhJ; Hypothetical protein; hypothetical protein 1855104 7550872 Sca_1853 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634944.1 1854457 R 396513 CDS YP_002634945.1 224477339 7550873 1855231..1855803 1 NC_012121.1 similar to TetR family regulatory protein,(P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein; putative transcriptional regulator 1855803 7550873 Sca_1854 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002634945.1 1855231 D 396513 CDS YP_002634946.1 224477340 7550874 1855935..1856096 1 NC_012121.1 (P96706) Putative membrane protein ydgH; Hypothetical protein; hypothetical protein 1856096 7550874 Sca_1855 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634946.1 1855935 D 396513 CDS YP_002634947.1 224477341 7550875 1856102..1858435 1 NC_012121.1 similar to transporter, (to B. subtilis YdgH protein),(P96706) Putative membrane protein ydgH,InterPro: Sterol-sensing 5TM box; Hypothetical protein; hypothetical protein 1858435 7550875 Sca_1856 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634947.1 1856102 D 396513 CDS YP_002634948.1 224477342 7550876 complement(1858507..1859727) 1 NC_012121.1 Hypothetical protein; TcaB protein 1859727 tcaB 7550876 tcaB Staphylococcus carnosus subsp. carnosus TM300 TcaB protein YP_002634948.1 1858507 R 396513 CDS YP_002634949.1 224477343 7552170 complement(1859920..1861278) 1 NC_012121.1 Hypothetical protein; TcaA protein 1861278 tcaA 7552170 tcaA Staphylococcus carnosus subsp. carnosus TM300 TcaA protein YP_002634949.1 1859920 R 396513 CDS YP_002634950.1 224477344 7552169 complement(1861610..1862071) 1 NC_012121.1 similar to TcaR transcriptional regulator Staphylococcus epidermidis,(Q8NVA6) Putative HTH-type transcriptional regulator MW2183,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; putative transcriptional regulator 1862071 7552169 Sca_1859 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002634950.1 1861610 R 396513 CDS YP_002634951.1 224477345 7550877 1862232..1863221 1 NC_012121.1 (P33017) SanA protein,InterPro: Protein of unknown function DUF218; Hypothetical protein; hypothetical protein 1863221 7550877 Sca_1860 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634951.1 1862232 D 396513 CDS YP_002634952.1 224477346 7550878 complement(1863298..1863987) 1 NC_012121.1 (Q58903) Hypothetical ABC transporter ATP-binding protein MJ1508,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 1863987 7550878 Sca_1861 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002634952.1 1863298 R 396513 CDS YP_002634953.1 224477347 7550879 complement(1863987..1865045) 1 NC_012121.1 (Q50735) Hypothetical protein Rv2563/MT2639/Mb2592 precursor,InterPro: Protein of unknown function DUF214; Hypothetical protein; hypothetical protein 1865045 7550879 Sca_1862 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634953.1 1863987 R 396513 CDS YP_002634954.1 224477348 7550880 1865210..1865884 1 NC_012121.1 similar to two component histidine kinase sensor,(P94414) Hypothetical sensor-like histidine kinase yclK (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; hypothetical protein 1865884 7550880 Sca_1863 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634954.1 1865210 D 396513 CDS YP_002634955.1 224477349 7550881 1865877..1867256 1 NC_012121.1 similar to two component histidine kinase sensor,(P94414) Hypothetical sensor-like histidine kinase yclK (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; hypothetical protein 1867256 7550881 Sca_1864 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634955.1 1865877 D 396513 CDS YP_002634956.1 224477350 7550882 complement(1867306..1868781) 1 NC_012121.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1868781 mqo 7550882 mqo Staphylococcus carnosus subsp. carnosus TM300 malate:quinone oxidoreductase YP_002634956.1 1867306 R 396513 CDS YP_002634957.1 224477351 7551805 1869105..1870277 1 NC_012121.1 (O05083) Putative glycosyl transferase HI1698 (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein; putative transferase 1870277 7551805 Sca_1866 Staphylococcus carnosus subsp. carnosus TM300 putative transferase YP_002634957.1 1869105 D 396513 CDS YP_002634958.1 224477352 7550883 complement(1870378..1871979) 1 NC_012121.1 (Q9K5Z9) L-lactate permease,InterPro: L-lactate permease; Hypothetical protein; putative L-lactate permease lctP 1871979 7550883 Sca_1867 Staphylococcus carnosus subsp. carnosus TM300 putative L-lactate permease lctP YP_002634958.1 1870378 R 396513 CDS YP_002634959.1 224477353 7550884 1872381..1874102 1 NC_012121.1 (Q8RKI5) Putative CDP-glycerol:glycerophosphate glycerophosphotransferase tarF (EC 2.7.8.-),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein; hypothetical protein 1874102 7550884 Sca_1868 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634959.1 1872381 D 396513 CDS YP_002634960.1 224477354 7550885 complement(1874164..1874964) 1 NC_012121.1 (O85467) Spore germination protein gerIA; Hypothetical protein; hypothetical protein 1874964 7550885 Sca_1869 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634960.1 1874164 R 396513 CDS YP_002634961.1 224477355 7550886 1875183..1876178 1 NC_012121.1 (P26646) Protein yhdH,InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein; hypothetical protein 1876178 7550886 Sca_1870 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634961.1 1875183 D 396513 CDS YP_002634962.1 224477356 7550887 1876376..1877740 1 NC_012121.1 similar to bicyclomycin resistance protein TcaB (Staphylococcus epidermides),(P46333) Probable metabolite transport protein csbC,InterPro: Sugar transporter; Hypothetical protein; hypothetical protein 1877740 7550887 Sca_1871 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634962.1 1876376 D 396513 CDS YP_002634963.1 224477357 7550888 complement(1877871..1878908) 1 NC_012121.1 similar to thioredoxin reductase ,(P52214) Thioredoxin reductase (EC 1.8.1.9) (TRXR) (TR),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein; hypothetical protein 1878908 7550888 Sca_1872 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634963.1 1877871 R 396513 CDS YP_002634964.1 224477358 7550889 complement(1879058..1879489) 1 NC_012121.1 (P59641) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes: Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains: Leader protein; p65 homolog; NSP1 (EC 3.4.24.-) (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC 3.4.24.-) (3CL-PRO) (3; Hypothetical protein; hypothetical protein 1879489 7550889 Sca_1873 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634964.1 1879058 R 396513 CDS YP_002634965.1 224477359 7550890 complement(1879583..1880017) 1 NC_012121.1 similar to MarR family regulatory protein,(P55740) Transcriptional regulator slyA,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; putative transcriptional regulator 1880017 7550890 Sca_1874 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002634965.1 1879583 R 396513 CDS YP_002634966.1 224477360 7550891 1880176..1881111 1 NC_012121.1 similar to cationic transporter,(Q58439) CorA-like protein,InterPro: Mg2+ transporter protein CorA-like; Hypothetical protein; hypothetical protein 1881111 7550891 Sca_1875 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634966.1 1880176 D 396513 CDS YP_002634967.1 224477361 7550892 complement(1881165..1881725) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1881725 7550892 Sca_1876 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634967.1 1881165 R 396513 CDS YP_002634968.1 224477362 7550893 1881853..1882203 1 NC_012121.1 (P48785) Pathogenesis-related homeodomain protein (PRHA); Hypothetical protein; hypothetical protein 1882203 7550893 Sca_1877 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634968.1 1881853 D 396513 CDS YP_002634969.1 224477363 7550894 complement(1882366..1883643) 1 NC_012121.1 (P24943) Proton/sodium-glutamate symport protein (Glutamate-aspartate carrier protein),InterPro: Sodium:dicarboxylate symporter; Conserved hypothetical protein; putative proton/sodium-glutamate symport protein 1883643 gltT 7550894 gltT Staphylococcus carnosus subsp. carnosus TM300 putative proton/sodium-glutamate symport protein YP_002634969.1 1882366 R 396513 CDS YP_002634970.1 224477364 7551650 complement(1883825..1884403) 1 NC_012121.1 (P96661) Hypothetical transport protein ydeD,InterPro: Protein of unknown function DUF6; Hypothetical protein; hypothetical protein 1884403 7551650 Sca_1879 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634970.1 1883825 R 396513 CDS YP_002634971.1 224477365 7550895 complement(1884946..1885305) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1885305 7550895 Sca_1880 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634971.1 1884946 R 396513 CDS YP_002634972.1 224477366 7550896 1885669..1886106 1 NC_012121.1 similar to transcriptional regulator,(O34777) Organic hydroperoxide resistance transcriptional regulator,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; hypothetical protein 1886106 7550896 Sca_1881 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634972.1 1885669 D 396513 CDS YP_002634973.1 224477367 7550897 1886259..1886666 1 NC_012121.1 (O30851) Heat shock protein HSP.16.4,InterPro: Heat shock protein Hsp20; Hypothetical protein; hypothetical protein 1886666 7550897 Sca_1882 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634973.1 1886259 D 396513 CDS YP_002634974.1 224477368 7550898 complement(1886752..1888026) 1 NC_012121.1 (P13702) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.88) (HMG-CoA reductase),InterPro: Hydroxymethylglutaryl-coenzyme A reductase; Hypothetical protein; putative hydroxymethylglutaryl-CoA reductase 1888026 mvaA 7550898 mvaA Staphylococcus carnosus subsp. carnosus TM300 putative hydroxymethylglutaryl-CoA reductase YP_002634974.1 1886752 R 396513 CDS YP_002634975.1 224477369 7551832 complement(1888033..1889184) 1 NC_012121.1 (Q46939) Probable acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase),InterPro: Thiolase; Hypothetical protein; putative acetyl-CoA acetyltransferase 1889184 thiL 7551832 thiL Staphylococcus carnosus subsp. carnosus TM300 putative acetyl-CoA acetyltransferase YP_002634975.1 1888033 R 396513 CDS YP_002634976.1 224477370 7552182 1889298..1890467 1 NC_012121.1 former orf1; similar to condensing-enzymes;,(P40830) Putative polyketide biosynthesis protein pksG,InterPro: Hydroxymethylglutaryl-coenzyme A synthase; Hypothetical protein; putative hydroxymethylglutaryl-CoA synthase 1890467 mvaS 7552182 mvaS Staphylococcus carnosus subsp. carnosus TM300 putative hydroxymethylglutaryl-CoA synthase YP_002634976.1 1889298 D 396513 CDS YP_002634977.1 224477371 7551836 1890685..1891884 1 NC_012121.1 former orf2, similar to SpoVE, RodA, and FtsW;,(O07639) Hypothetical protein ylaO,InterPro: Cell cycle protein; Hypothetical protein; putative cell division protein 1891884 7551836 Sca_1886 Staphylococcus carnosus subsp. carnosus TM300 putative cell division protein YP_002634977.1 1890685 D 396513 CDS YP_002634978.1 224477372 7550899 complement(1892022..1893188) 1 NC_012121.1 Hypothetical protein; nitrate transporter 1893188 narT 7550899 narT Staphylococcus carnosus subsp. carnosus TM300 nitrate transporter YP_002634978.1 1892022 R 396513 CDS YP_002634979.1 224477373 7551850 complement(1893477..1894130) 1 NC_012121.1 as part of NreBC controls genes involved in,nitrate and nitrite reduction,(Q51373) Response regulator gacA (Global activator),InterPro: Response regulator receiver; Hypothetical protein; response regulator of the two-component regulatory 1894130 nreC 7551850 nreC Staphylococcus carnosus subsp. carnosus TM300 response regulator of the two-component regulatory YP_002634979.1 1893477 R 396513 CDS YP_002634980.1 224477374 7551867 complement(1894148..1895191) 1 NC_012121.1 as part of NreBC controls genes involved in,nitrate and nitrite reduction,P29905) Methanol utilization control sensor protein moxY (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein; NreB protein 1895191 nreB 7551867 nreB Staphylococcus carnosus subsp. carnosus TM300 NreB protein YP_002634980.1 1894148 R 396513 CDS YP_002634981.1 224477375 7551866 complement(1895169..1895636) 1 NC_012121.1 similar to the N-terminus of NifA of Azospirillum,brasilense,(Q06407) Rho-type GTPase-activating protein; Hypothetical protein; NreA protein 1895636 nreA 7551866 nreA Staphylococcus carnosus subsp. carnosus TM300 NreA protein YP_002634981.1 1895169 R 396513 CDS YP_002634982.1 224477376 7551865 complement(1895652..1896314) 1 NC_012121.1 similar to Escherichia coli nitrate reductases NRA,and NRZ gamma subunits,(P19316) Respiratory nitrate reductase 2 gamma chain (EC 1.7.99.4),InterPro: Nitrate reductase gamma subunit; Hypothetical protein; NarI protein 1896314 narI 7551865 narI Staphylococcus carnosus subsp. carnosus TM300 NarI protein YP_002634982.1 1895652 R 396513 CDS YP_002634983.1 224477377 7551848 complement(1896328..1896903) 1 NC_012121.1 similar to Escherichia coli nitrate reductases NRA,and NRZ delta subunits,(P42178) Nitrate reductase delta chain (EC 1.7.99.4),InterPro: Nitrate reductase delta subunit; Hypothetical protein; NarJ protein 1896903 narJ 7551848 narJ Staphylococcus carnosus subsp. carnosus TM300 NarJ protein YP_002634983.1 1896328 R 396513 CDS YP_002634984.1 224477378 7551849 complement(1896896..1898449) 1 NC_012121.1 (P42176) Nitrate reductase beta chain (EC 1.7.99.4),InterPro: Nitrate reductase beta subunit; Hypothetical protein; nitrate reductase beta chain 1898449 narH 7551849 narH Staphylococcus carnosus subsp. carnosus TM300 nitrate reductase beta chain YP_002634984.1 1896896 R 396513 CDS YP_002634985.1 224477379 7551847 complement(1898463..1902137) 1 NC_012121.1 respiratory nitrate reductase alpha chain 1902137 narG 7551847 narG Staphylococcus carnosus subsp. carnosus TM300 respiratory nitrate reductase alpha chain YP_002634985.1 1898463 R 396513 CDS YP_002634986.1 224477380 7551846 complement(1902430..1903383) 1 NC_012121.1 similar to C-terminus of Escherichia coli CysG,(P42437) Uroporphyrin-III C-methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM),InterPro: Uroporphyrin-III C-methyltransferase C-terminal; Hypothetical protein; SirB protein 1903383 sirB 7551846 sirB Staphylococcus carnosus subsp. carnosus TM300 SirB protein YP_002634986.1 1902430 R 396513 CDS YP_002634987.1 224477381 7552135 complement(1903374..1903688) 1 NC_012121.1 similar to Escherichia coli NADH-dependent nitrite,reductase small subunit NirD,(P42436) Assimilatory nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4),InterPro: Rieske [2Fe-2S] domain; Hypothetical protein; NirD protein 1903688 nirD 7552135 nirD Staphylococcus carnosus subsp. carnosus TM300 NirD protein YP_002634987.1 1903374 R 396513 CDS YP_002634988.1 224477382 7551856 complement(1903691..1906096) 1 NC_012121.1 Nitrite reductase,(P42435) Nitrite reductase [NAD(P)H] (EC 1.7.1.4),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein; NirB 1906096 nirB 7551856 nirB Staphylococcus carnosus subsp. carnosus TM300 NirB YP_002634988.1 1903691 R 396513 CDS YP_002634989.1 224477383 7551854 complement(1906100..1906555) 1 NC_012121.1 similar to N-terminus of Escherichia coli CysG; Hypothetical protein; SirA 1906555 sirA 7551854 sirA Staphylococcus carnosus subsp. carnosus TM300 SirA YP_002634989.1 1906100 R 396513 CDS YP_002634990.1 224477384 7552134 complement(1906556..1907278) 1 NC_012121.1 involved in nitrite reduction; Hypothetical protein; NirR protein 1907278 nirR 7552134 nirR Staphylococcus carnosus subsp. carnosus TM300 NirR protein YP_002634990.1 1906556 R 396513 CDS YP_002634991.1 224477385 7551857 complement(1907406..1908236) 1 NC_012121.1 NirC protein 1908236 nirC 7551857 nirC Staphylococcus carnosus subsp. carnosus TM300 NirC protein YP_002634991.1 1907406 R 396513 CDS YP_002634992.1 224477386 7551855 complement(1908454..1908642) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1908642 7551855 Sca_1901 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634992.1 1908454 R 396513 CDS YP_002634993.1 224477387 7550900 complement(1908752..1909222) 1 NC_012121.1 (P35453) Homeobox protein Hox-D13 (Hox-4I),InterPro: Protein of unknown function DUF704; Hypothetical protein; hypothetical protein 1909222 7550900 Sca_1902 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634993.1 1908752 R 396513 CDS YP_002634994.1 224477388 7550901 complement(1909366..1909881) 1 NC_012121.1 (Q7N562) Hypothetical UPF0312 protein plu2095 precursor,InterPro: YceI; Hypothetical protein; hypothetical protein 1909881 7550901 Sca_1903 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634994.1 1909366 R 396513 CDS YP_002634995.1 224477389 7550902 complement(1910005..1910889) 1 NC_012121.1 similar to cobalamin synthesis related protein CobW,(P29937) CobW protein,InterPro: Cobalamin synthesis protein/P47K; Hypothetical protein; hypothetical protein 1910889 7550902 Sca_1904 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634995.1 1910005 R 396513 CDS YP_002634996.1 224477390 7550903 complement(1910945..1912276) 1 NC_012121.1 (Q57986) Ferrous iron transport protein B; Hypothetical protein; hypothetical protein 1912276 7550903 Sca_1905 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634996.1 1910945 R 396513 CDS YP_002634997.1 224477391 7550904 complement(1912270..1913388) 1 NC_012121.1 (P50736) Hypothetical protein ypdA,InterPro: NAD-binding site; Hypothetical protein; hypothetical protein 1913388 7550904 Sca_1906 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634997.1 1912270 R 396513 CDS YP_002634998.1 224477392 7550905 complement(1913621..1914220) 1 NC_012121.1 (O32218) Disulfide bond formation protein D precursor (Disulfide oxidoreductase D) (Thiol-disulfide oxidoreductase D); Hypothetical protein; hypothetical protein 1914220 7550905 Sca_1907 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002634998.1 1913621 R 396513 CDS YP_002634999.1 224477393 7550906 complement(1914429..1915166) 1 NC_012121.1 similar to ABC transporter, ATP binding subunit ,(P54537) Probable amino-acid ABC transporter ATP-binding protein yqiZ,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter 1915166 7550906 Sca_1908 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter YP_002634999.1 1914429 R 396513 CDS YP_002635000.1 224477394 7550907 complement(1915163..1915870) 1 NC_012121.1 similar to ABC transporter, permease protein ,(P76315) Hypothetical amino-acid ABC transporter permease protein yecS,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; hypothetical protein 1915870 7550907 Sca_1909 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635000.1 1915163 R 396513 CDS YP_002635001.1 224477395 7550908 complement(1915881..1916669) 1 NC_012121.1 similar to extracellular solute-binding lipoprotein,(P45024) Probable amino-acid ABC transporter binding protein HI1080 precursor,InterPro: Bacterial extracellular solute-binding protein family 3; Hypothetical protein; hypothetical protein 1916669 7550908 Sca_1910 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635001.1 1915881 R 396513 CDS YP_002635002.1 224477396 7550909 1916916..1917026 1 NC_012121.1 Hypothetical protein; hypothetical protein 1917026 7550909 Sca_1911 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635002.1 1916916 D 396513 CDS YP_002635003.1 224477397 7550910 complement(1917289..1917975) 1 NC_012121.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1917975 gpmA 7550910 gpmA Staphylococcus carnosus subsp. carnosus TM300 phosphoglyceromutase YP_002635003.1 1917289 R 396513 CDS YP_002635004.1 224477398 7550911 1918258..1918626 1 NC_012121.1 (Q8CMZ9) Immunodominant staphylococcal antigen A precursor; Hypothetical protein; hypothetical protein 1918626 7550911 Sca_1913 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635004.1 1918258 D 396513 CDS YP_002635005.1 224477399 7550912 complement(1918767..1919660) 1 NC_012121.1 (P46348) Hypothetical UPF0018 protein yeaB,InterPro: Cation efflux protein; Hypothetical protein; hypothetical protein 1919660 7550912 Sca_1914 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635005.1 1918767 R 396513 CDS YP_002635006.1 224477400 7550913 complement(1919832..1920215) 1 NC_012121.1 (Q9CDA3) Hypothetical protein ML0110,InterPro: GtrA-like protein; Hypothetical protein; hypothetical protein 1920215 7550913 Sca_1915 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635006.1 1919832 R 396513 CDS YP_002635007.1 224477401 7550914 1920856..1922052 1 NC_012121.1 similar to bicyclomycin resistance protein TcaB,(P45123) Bicyclomycin resistance protein homolog,InterPro: Major facilitator superfamily; Hypothetical protein; hypothetical protein 1922052 7550914 Sca_1916 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635007.1 1920856 D 396513 CDS YP_002635008.1 224477402 7550915 1922165..1922782 1 NC_012121.1 Hypothetical protein; hypothetical protein 1922782 7550915 Sca_1917 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635008.1 1922165 D 396513 CDS YP_002635009.1 224477403 7550916 1923037..1924434 1 NC_012121.1 (P96704) Hypothetical transport protein ydgF,InterPro: Amino acid permease-associated region; Hypothetical protein; putative amino acid permease 1924434 7550916 Sca_1918 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid permease YP_002635009.1 1923037 D 396513 CDS YP_002635010.1 224477404 7550917 complement(1924491..1925393) 1 NC_012121.1 (P26093) Lipoprotein E precursor (Outer membrane protein P4) (OMP P4),InterPro: 5-nucleotidase lipoprotein e(P4); Conserved hypothetical protein; hypothetical protein 1925393 7550917 Sca_1919 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635010.1 1924491 R 396513 CDS YP_002635011.1 224477405 7550918 complement(1925559..1927388) 1 NC_012121.1 similar to putative membrane proteins and amino acid transporters.,(P33016) Hypothetical transport protein yeeF,InterPro: Amino acid/polyamine transporter family I; Hypothetical protein; hypothetical protein 1927388 7550918 Sca_1920 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635011.1 1925559 R 396513 CDS YP_002635012.1 224477406 7550919 1927689..1929260 1 NC_012121.1 similar to beta-lactamase,similar to fmtA-like protein (Staphylococcus aureus),(P00811) Beta-lactamase precursor (EC 3.5.2.6) (Cephalosporinase),InterPro: Beta-lactamase; Hypothetical protein; hypothetical protein 1929260 7550919 Sca_1921 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635012.1 1927689 D 396513 CDS YP_002635013.1 224477407 7550920 complement(1929665..1931059) 1 NC_012121.1 (P27304) Multidrug resistance protein B,InterPro: General substrate transporter; Hypothetical protein; putative integral membrane efflux protein 1931059 7550920 Sca_1922 Staphylococcus carnosus subsp. carnosus TM300 putative integral membrane efflux protein YP_002635013.1 1929665 R 396513 CDS YP_002635014.1 224477408 7550921 1931305..1933086 1 NC_012121.1 (Q8CR79) Sensor protein lytS (EC 2.7.3.-),InterPro: GAF domain; Hypothetical protein; two-component sensor histidine kinase 1933086 lytS 7550921 lytS Staphylococcus carnosus subsp. carnosus TM300 two-component sensor histidine kinase YP_002635014.1 1931305 D 396513 CDS YP_002635015.1 224477409 7551766 1933067..1933867 1 NC_012121.1 (P60609) Sensory transduction protein lytR,InterPro: Response regulator AlgR/VirR/ComE type; Hypothetical protein; two-component response regulator 1933867 lytR 7551766 lytR Staphylococcus carnosus subsp. carnosus TM300 two-component response regulator YP_002635015.1 1933067 D 396513 CDS YP_002635016.1 224477410 7551765 1934110..1934571 1 NC_012121.1 similar to ,(P60649) Antiholin-like protein lrgA,InterPro: LrgA family; Hypothetical protein; putative holin-like protein LrgA 1934571 lrgA 7551765 lrgA Staphylococcus carnosus subsp. carnosus TM300 putative holin-like protein LrgA YP_002635016.1 1934110 D 396513 CDS YP_002635017.1 224477411 7551755 1934568..1935269 1 NC_012121.1 in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases; antiholin-like protein LrgB 1935269 lrgB 7551755 lrgB Staphylococcus carnosus subsp. carnosus TM300 antiholin-like protein LrgB YP_002635017.1 1934568 D 396513 CDS YP_002635018.1 224477412 7551756 1935560..1935919 1 NC_012121.1 (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propionyl-CoA synthetase); Hypothetical protein; hypothetical protein 1935919 7551756 Sca_1927 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635018.1 1935560 D 396513 CDS YP_002635019.1 224477413 7550922 1935938..1936300 1 NC_012121.1 (O54990) Prominin 1 precursor (Prominin-like protein 1) (Antigen AC133 homolog); Hypothetical protein; hypothetical protein 1936300 7550922 Sca_1928 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635019.1 1935938 D 396513 CDS YP_002635020.1 224477414 7550923 1936302..1936853 1 NC_012121.1 similar to transcriptional regulator TetR family (Bacillus subtilis),similar to transcriptional regulator AcrR family (Staphylococcus epidermidis),(Q10774) Putative HTH-type transcriptional regulator Rv1556/MT1607/Mb1581,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein; putative transcriptional regulator 1936853 7550923 Sca_1929 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002635020.1 1936302 D 396513 CDS YP_002635021.1 224477415 7550924 complement(1936940..1937710) 1 NC_012121.1 similar to acetyl esterase (Caldocellum saccharolyticum),similar to tributyrin esterase (Staphylococcus epidermidis) ,(P23553) Acetyl esterase (EC 3.1.-.-) (Acetylxylosidase),InterPro: Putative esterase; Hypothetical protein; putative esterase 1937710 7550924 Sca_1930 Staphylococcus carnosus subsp. carnosus TM300 putative esterase YP_002635021.1 1936940 R 396513 CDS YP_002635022.1 224477416 7550925 complement(1937796..1938479) 1 NC_012121.1 (O34742) Glycine betaine/carnitine/choline transport system permease protein opuCD,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative glycine betaine/carnitine/choline transport system permease 1938479 opuCD 7550925 opuCD Staphylococcus carnosus subsp. carnosus TM300 putative glycine betaine/carnitine/choline transport system permease YP_002635022.1 1937796 R 396513 CDS YP_002635023.1 224477417 7551893 complement(1938479..1939420) 1 NC_012121.1 (O32243) Glycine betaine/carnitine/choline-binding protein precursor (Osmoprotectant-binding protein),InterPro: Substrate-binding region of ABC-type glycine betaine transport system; Hypothetical protein; putative glycine betaine/carnitine/choline ABC transporter (osmoprotec) opuCC 1939420 opuCC 7551893 opuCC Staphylococcus carnosus subsp. carnosus TM300 putative glycine betaine/carnitine/choline ABC transporter (osmoprotec) opuCC YP_002635023.1 1938479 R 396513 CDS YP_002635024.1 224477418 7551892 complement(1939439..1940074) 1 NC_012121.1 (O34878) Glycine betaine/carnitine/choline transport system permease protein opuCB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative glycine betaine/carnitine/choline transport system permease 1940074 opuCB 7551892 opuCB Staphylococcus carnosus subsp. carnosus TM300 putative glycine betaine/carnitine/choline transport system permease YP_002635024.1 1939439 R 396513 CDS YP_002635025.1 224477419 7551891 complement(1940074..1941327) 1 NC_012121.1 (Q45460) Choline transport ATP-binding protein opuBA,InterPro: Glycine betaine/L-proline transport ATP-binding subunit; Hypothetical protein; putative glycine betaine/carnitine/choline ABC transporter (ATP-bindin) opuCA 1941327 opuCA 7551891 opuCA Staphylococcus carnosus subsp. carnosus TM300 putative glycine betaine/carnitine/choline ABC transporter (ATP-bindin) opuCA YP_002635025.1 1940074 R 396513 CDS YP_002635026.1 224477420 7551890 complement(1942067..1942663) 1 NC_012121.1 (O75146) Huntingtin interacting protein 1 related (Hip1-related) (Hip 12); Hypothetical protein; hypothetical protein 1942663 7551890 Sca_1935 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635026.1 1942067 R 396513 CDS YP_002635027.1 224477421 7550926 1943170..1944828 1 NC_012121.1 similar to L-aspartate transporter in Bacillus subtilis,(O07002) Asparate-proton symporter (L-aspartate transporter),InterPro: Amino acid permease-associated region; Hypothetical protein; putative amino acid transporter 1944828 7550926 Sca_1936 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid transporter YP_002635027.1 1943170 D 396513 CDS YP_002635028.1 224477422 7550927 1944934..1946298 1 NC_012121.1 similar to para-nitrobenzyl esterase chain A (Bacillus subtilis),(P37967) Para-nitrobenzyl esterase (EC 3.1.1.-) (PNB carboxy-esterase) (PNBCE),InterPro: Carboxylesterase type B; Hypothetical protein; putative para-nitrobenzyl esterase chain A 1946298 7550927 Sca_1937 Staphylococcus carnosus subsp. carnosus TM300 putative para-nitrobenzyl esterase chain A YP_002635028.1 1944934 D 396513 CDS YP_002635029.1 224477423 7550928 complement(1946347..1947540) 1 NC_012121.1 similar to chloramphenicol resistance protein,(P44535) Probable sugar efflux transporter,InterPro: General substrate transporter; Hypothetical protein; hypothetical protein 1947540 7550928 Sca_1938 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635029.1 1946347 R 396513 CDS YP_002635030.1 224477424 7550929 complement(1947722..1948495) 1 NC_012121.1 (P77307) Hypothetical UPF0014 membrane protein ybbM,InterPro: Conserved hypothetical protein 245; Hypothetical protein; hypothetical protein 1948495 7550929 Sca_1939 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635030.1 1947722 R 396513 CDS YP_002635031.1 224477425 7550930 complement(1948492..1949163) 1 NC_012121.1 (P77279) Hypothetical ABC transporter ATP-binding protein ybbL,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 1949163 7550930 Sca_1940 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002635031.1 1948492 R 396513 CDS YP_002635032.1 224477426 7550931 complement(1949286..1950032) 1 NC_012121.1 truncated ORF, similar to protein of pXO2-46 ,(P45613) Hypothetical 37.9 kDa protein in ptsH 3region (ORF1),InterPro: Abortive infection protein; Hypothetical protein; hypothetical protein 1950032 7550931 Sca_1941 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635032.1 1949286 R 396513 CDS YP_002635033.1 224477427 7550932 complement(1950171..1950956) 1 NC_012121.1 similar to protein of pXO2-46, incomplete alignment,(Q13315) Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated) (A-T mutated),InterPro: Abortive infection protein; Hypothetical protein; hypothetical protein 1950956 7550932 Sca_1942 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635033.1 1950171 R 396513 CDS YP_002635034.1 224477428 7550933 complement(1951153..1951617) 1 NC_012121.1 (P33385) Hypothetical lipoprotein Lmo0207 precursor; Hypothetical protein; hypothetical protein 1951617 7550933 Sca_1943 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635034.1 1951153 R 396513 CDS YP_002635035.1 224477429 7550934 1951894..1953492 1 NC_012121.1 (P44828) Putative exopolyphosphatase (EC 3.6.1.11) (Metaphosphatase),InterPro: Ppx/GppA phosphatase; Hypothetical protein; putative exopolyphosphatase 1953492 ppx 7550934 ppx Staphylococcus carnosus subsp. carnosus TM300 putative exopolyphosphatase YP_002635035.1 1951894 D 396513 CDS YP_002635036.1 224477430 7551955 1953706..1955880 1 NC_012121.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1955880 ppk 7551955 ppk Staphylococcus carnosus subsp. carnosus TM300 polyphosphate kinase YP_002635036.1 1953706 D 396513 CDS YP_002635037.1 224477431 7551954 complement(1956000..1957232) 1 NC_012121.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 1957232 argE 7551954 argE Staphylococcus carnosus subsp. carnosus TM300 acetylornithine deacetylase YP_002635037.1 1956000 R 396513 CDS YP_002635038.1 224477432 7551409 complement(1957296..1958117) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1958117 7551409 Sca_1947 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635038.1 1957296 R 396513 CDS YP_002635039.1 224477433 7550935 complement(1958192..1959553) 1 NC_012121.1 (P12012) Gluconate permease,InterPro: Gluconate transporter; Hypothetical protein; putative gluconate permease 1959553 gntP 7550935 gntP Staphylococcus carnosus subsp. carnosus TM300 putative gluconate permease YP_002635039.1 1958192 R 396513 CDS YP_002635040.1 224477434 7551658 complement(1959677..1961212) 1 NC_012121.1 (P12011) Gluconokinase (EC 2.7.1.12) (Gluconate kinase),InterPro: Gluconate kinase; Hypothetical protein; putative gluconokinase 1961212 gntK 7551658 gntK Staphylococcus carnosus subsp. carnosus TM300 putative gluconokinase YP_002635040.1 1959677 R 396513 CDS YP_002635041.1 224477435 7551657 complement(1961239..1961946) 1 NC_012121.1 (P10585) Gluconate operon transcriptional repressor (P28 protein),InterPro: Bacterial regulatory protein GntR family; Hypothetical protein; putative gluconate operon transcriptional repressor 1961946 gntR 7551657 gntR Staphylococcus carnosus subsp. carnosus TM300 putative gluconate operon transcriptional repressor YP_002635041.1 1961239 R 396513 CDS YP_002635042.1 224477436 7551659 1962050..1962646 1 NC_012121.1 (P21341) Protease synthase and sporulation negative regulatory protein PAI,InterPro: Negative transcriptional regulator; Hypothetical protein; hypothetical protein 1962646 7551659 Sca_1951 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635042.1 1962050 D 396513 CDS YP_002635043.1 224477437 7550936 complement(1962711..1963319) 1 NC_012121.1 (P06800) Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA) (Lymphocyte common antigen Ly-5) (CD45) (T200); Hypothetical protein; hypothetical protein 1963319 7550936 Sca_1952 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635043.1 1962711 R 396513 CDS YP_002635044.1 224477438 7550937 complement(1963494..1965602) 1 NC_012121.1 (Q06716) ATP-dependent protease ATP-binding subunit clpL,InterPro: AAA ATPase central region; Hypothetical protein; putative ATP-dependent Clp proteinase chain clpL 1965602 clpL 7550937 clpL Staphylococcus carnosus subsp. carnosus TM300 putative ATP-dependent Clp proteinase chain clpL YP_002635044.1 1963494 R 396513 CDS YP_002635045.1 224477439 7551474 complement(1966319..1967017) 1 NC_012121.1 (P39583) Hypothetical protein ywaC,InterPro: RelA/SpoT; Hypothetical protein; hypothetical protein 1967017 7551474 Sca_1954 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635045.1 1966319 R 396513 CDS YP_002635046.1 224477440 7550938 1967296..1968495 1 NC_012121.1 (P31521) 47 kDa protein (P47K),InterPro: Cobalamin synthesis protein/P47K; Hypothetical protein; hypothetical protein 1968495 7550938 Sca_1955 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635046.1 1967296 D 396513 CDS YP_002635047.1 224477441 7550939 complement(1968726..1969139) 1 NC_012121.1 (Q8TV85) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase); Hypothetical protein; hypothetical protein 1969139 7550939 Sca_1956 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635047.1 1968726 R 396513 CDS YP_002635048.1 224477442 7550940 complement(1969224..1971125) 1 NC_012121.1 (P45537) Hypothetical protein yhfK; Hypothetical protein; hypothetical protein 1971125 7550940 Sca_1957 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635048.1 1969224 R 396513 CDS YP_002635049.1 224477443 7550941 complement(1971277..1971975) 1 NC_012121.1 (Q04518) Alpha-acetolactate decarboxylase (EC 4.1.1.5),InterPro: Alpha-acetolactate decarboxylase; Conserved hypothetical protein; putative alpha-acetolactate decarboxylase 1971975 7550941 Sca_1958 Staphylococcus carnosus subsp. carnosus TM300 putative alpha-acetolactate decarboxylase YP_002635049.1 1971277 R 396513 CDS YP_002635050.1 224477444 7550942 complement(1972099..1972401) 1 NC_012121.1 (P73602) Hypothetical protein sll1783,InterPro: Antibiotic biosynthesis monooxygenase; Hypothetical protein; hypothetical protein 1972401 7550942 Sca_1959 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635050.1 1972099 R 396513 CDS YP_002635051.1 224477445 7550943 complement(1972548..1973822) 1 NC_012121.1 (P42237) Probable glucarate transporter (D-glucarate permease),InterPro: General substrate transporter; Conserved hypothetical protein; putative glucarate transporter 1973822 7550943 Sca_1960 Staphylococcus carnosus subsp. carnosus TM300 putative glucarate transporter YP_002635051.1 1972548 R 396513 CDS YP_002635052.1 224477446 7550944 1974348..1974968 1 NC_012121.1 (Q9CHL6) Alkaline phosphatase like protein,InterPro: DedA family; Hypothetical protein; putative alkaline phosphatase 1974968 7550944 Sca_1961 Staphylococcus carnosus subsp. carnosus TM300 putative alkaline phosphatase YP_002635052.1 1974348 D 396513 CDS YP_002635053.1 224477447 7550945 complement(1975024..1975683) 1 NC_012121.1 (Q18879) Caveolin-2; Hypothetical protein; hypothetical protein 1975683 7550945 Sca_1962 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635053.1 1975024 R 396513 CDS YP_002635054.1 224477448 7550946 complement(1975680..1976528) 1 NC_012121.1 (P72335) Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I),InterPro: ABC transporter; Conserved hypothetical protein; putative ABC transporter ATP-binding protein 1976528 7550946 Sca_1963 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002635054.1 1975680 R 396513 CDS YP_002635055.1 224477449 7550947 1976756..1978708 1 NC_012121.1 (Q82WQ0) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Conserved hypothetical protein; putative fructose-bisphosphatase 1978708 fbp 7550947 fbp Staphylococcus carnosus subsp. carnosus TM300 putative fructose-bisphosphatase YP_002635055.1 1976756 D 396513 CDS YP_002635056.1 224477450 7551563 complement(1978764..1981778) 1 NC_012121.1 High confidence in function and specificity; beta-D-galactosidase 1981778 lacH 7551563 lacH Staphylococcus carnosus subsp. carnosus TM300 beta-D-galactosidase YP_002635056.1 1978764 R 396513 CDS YP_002635057.1 224477451 7551735 1981871..1982716 1 NC_012121.1 (O33813) Lactose operon transcription activator,InterPro: Helix-turn-helix AraC type; High confidence in function and specificity; lactose operon transcription regulator 1982716 lacR 7551735 lacR Staphylococcus carnosus subsp. carnosus TM300 lactose operon transcription regulator YP_002635057.1 1981871 D 396513 CDS YP_002635058.1 224477452 7551738 complement(1982732..1984165) 1 NC_012121.1 (O33814) Lactose permease (Lactose-proton symport) (Lactose transport protein),InterPro: Sodium:galactoside symporter; High confidence in function and specificity; melibiose:sodium symporter 1984165 lacP 7551738 lacP Staphylococcus carnosus subsp. carnosus TM300 melibiose:sodium symporter YP_002635058.1 1982732 R 396513 CDS YP_002635059.1 224477453 7551736 complement(1984514..1985407) 1 NC_012121.1 (Q9WXE6) Chlorohydroquinone/hydroquinone 12-dioxygenase (EC 1.13.11.-) (Hydroquinone meta-cleavage dioxygenase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Conserved hypothetical protein; putative glyoxylase family protein 1985407 7551736 Sca_1969 Staphylococcus carnosus subsp. carnosus TM300 putative glyoxylase family protein YP_002635059.1 1984514 R 396513 CDS YP_002635060.1 224477454 7550948 complement(1985469..1985909) 1 NC_012121.1 (P54182) Putative HTH-type transcriptional regulator ypoP,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; putative transcription regulator MarR family 1985909 7550948 Sca_1970 Staphylococcus carnosus subsp. carnosus TM300 putative transcription regulator MarR family YP_002635060.1 1985469 R 396513 CDS YP_002635061.1 224477455 7550949 complement(1986071..1987078) 1 NC_012121.1 similar to Zn-binding lipoprotein adcA,(Q9L5X1) Manganese ABC transporter substrate-binding lipoprotein precursor (Pneumococcal surface adhesin A),InterPro: Periplasmic solute binding protein; Hypothetical protein; hypothetical protein 1987078 7550949 Sca_1971 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635061.1 1986071 R 396513 CDS YP_002635062.1 224477456 7550950 1987370..1987651 1 NC_012121.1 (P39274) Hypothetical protein yjdJ; Hypothetical protein; hypothetical protein 1987651 7550950 Sca_1972 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635062.1 1987370 D 396513 CDS YP_002635063.1 224477457 7550951 complement(1987706..1989493) 1 NC_012121.1 (P35598) Putative ABC transporter ATP-binding protein exp8 (Exported protein 8),InterPro: ABC transporter transmembrane region; Hypothetical protein; putative ABC transporter ATP-binding/permease 1989493 7550951 Sca_1973 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding/permease YP_002635063.1 1987706 R 396513 CDS YP_002635064.1 224477458 7550952 complement(1989477..1991273) 1 NC_012121.1 (P77265) Multidrug resistance-like ATP-binding protein mdlA,InterPro: ABC transporter transmembrane region; High confidence in function and specificity; ABC transporter ATP-binding protein/permease 1991273 7550952 Sca_1974 Staphylococcus carnosus subsp. carnosus TM300 ABC transporter ATP-binding protein/permease YP_002635064.1 1989477 R 396513 CDS YP_002635065.1 224477459 7550953 complement(1991325..1992320) 1 NC_012121.1 (Q99RB1) D-lactate dehydrogenase (EC 1.1.1.28) (D-LDH) (D-specific D-2-hydroxyacid dehydrogenase),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein; D-specific D-2-hydroxyacid dehydrogenase 1992320 ddh 7550953 ddh Staphylococcus carnosus subsp. carnosus TM300 D-specific D-2-hydroxyacid dehydrogenase YP_002635065.1 1991325 R 396513 CDS YP_002635066.1 224477460 7551516 complement(1992513..1993184) 1 NC_012121.1 (O34475) Putative NAD(P)H nitroreductase yfkO (EC 1.-.-.-),InterPro: Nitroreductase family; Hypothetical protein; putative NAD(P)H-flavin oxidoreductase 1993184 7551516 Sca_1976 Staphylococcus carnosus subsp. carnosus TM300 putative NAD(P)H-flavin oxidoreductase YP_002635066.1 1992513 R 396513 CDS YP_002635067.1 224477461 7550954 complement(1993274..1993807) 1 NC_012121.1 (P96674) Putative NAD(P)H oxidoreductase ydeQ (EC 1.6.99.-),InterPro: NAD(P)H dehydrogenase (quinone); Hypothetical protein; putative NADPH oxidoreductase 1993807 7550954 Sca_1977 Staphylococcus carnosus subsp. carnosus TM300 putative NADPH oxidoreductase YP_002635067.1 1993274 R 396513 CDS YP_002635068.1 224477462 7550955 complement(1993884..1994060) 1 NC_012121.1 Hypothetical protein; hypothetical protein 1994060 7550955 Sca_1978 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635068.1 1993884 R 396513 CDS YP_002635069.1 224477463 7550956 complement(1994237..1995127) 1 NC_012121.1 (P16095) L-serine dehydratase 1 (EC 4.3.1.17) (L-serine deaminase 1) (SDH 1) (L-SD1),InterPro: L-serine dehydratase alpha subunit; Hypothetical protein; putative L-serine dehydratase 1995127 7550956 Sca_1979 Staphylococcus carnosus subsp. carnosus TM300 putative L-serine dehydratase YP_002635069.1 1994237 R 396513 CDS YP_002635070.1 224477464 7550957 complement(1995141..1995818) 1 NC_012121.1 (P33074) L-serine dehydratase beta chain (EC 4.3.1.17) (L-serine deaminase) (SDH) (L-SD),InterPro: Iron-sulfur-dependent L-serine dehydratase beta subunit; Hypothetical protein; putative L-serine dehydratase beta chain 1995818 7550957 Sca_1980 Staphylococcus carnosus subsp. carnosus TM300 putative L-serine dehydratase beta chain YP_002635070.1 1995141 R 396513 CDS YP_002635071.1 224477465 7550958 complement(1995866..1996618) 1 NC_012121.1 similar to C-terminal part (67-340) of perfringolysin O regulator protein, putative [Staphylococcus epidermidis RP62A] (YP_189652) (347 aa).; Hypothetical protein; hypothetical protein 1996618 7550958 Sca_1981 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635071.1 1995866 R 396513 CDS YP_002635072.1 224477466 7550959 complement(1996772..1996906) 1 NC_012121.1 similar to N-terminal part (aa 1-44) of perfringolysin O regulator protein (347 aa, putative [Staphylococcus epidermidis RP62A] (YP_189652).; Hypothetical protein; hypothetical protein 1996906 7550959 Sca_1982 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635072.1 1996772 R 396513 CDS YP_002635073.1 224477467 7550960 1997666..1998223 1 NC_012121.1 (P27470) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I) (Dextransucrase) (Sucrose 6-glucosyltransferase); Hypothetical protein; hypothetical protein 1998223 7550960 Sca_1983 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635073.1 1997666 D 396513 CDS YP_002635074.1 224477468 7550961 complement(1998355..1999371) 1 NC_012121.1 (P25144) Catabolite control protein A (Glucose-resistance amylase regulator),InterPro: Periplasmic binding protein/LacI transcriptional regulator; Hypothetical protein; putative catabolite control protein A 1999371 ccpA 7550961 ccpA Staphylococcus carnosus subsp. carnosus TM300 putative catabolite control protein A YP_002635074.1 1998355 R 396513 CDS YP_002635075.1 224477469 7551464 complement(1999442..2000206) 1 NC_012121.1 local similarity to lysophospholipase ,(P25026) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride peroxidase) (CPO-P) (Chloroperoxidase P),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; hypothetical protein 2000206 7551464 Sca_1985 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635075.1 1999442 R 396513 CDS YP_002635076.1 224477470 7550962 2000509..2001489 1 NC_012121.1 (P23516) High-affinity nickel transport protein,InterPro: High-affinity nickel-transport protein; Hypothetical protein; putative nickel transport protein 2001489 7550962 Sca_1986 Staphylococcus carnosus subsp. carnosus TM300 putative nickel transport protein YP_002635076.1 2000509 D 396513 CDS YP_002635077.1 224477471 7550963 complement(2001538..2001864) 1 NC_012121.1 (O07923) Branched-chain amino acid transport protein azlD,InterPro: Branched-chain amino acid transport; Hypothetical protein; putative branched-chain amino acid transport protein 2001864 alzD 7550963 alzD Staphylococcus carnosus subsp. carnosus TM300 putative branched-chain amino acid transport protein YP_002635077.1 2001538 R 396513 CDS YP_002635078.1 224477472 7551392 complement(2001866..2002744) 1 NC_012121.1 C-terminal part similar to branched-chain amino acid transport protein (Bacillus subtilis),(Q9ZJQ3) Hypothetical protein JHP1251,InterPro: AzlC protein; Hypothetical protein; hypothetical protein 2002744 7551392 Sca_1988 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635078.1 2001866 R 396513 CDS YP_002635079.1 224477473 7550964 complement(2003143..2003697) 1 NC_012121.1 similar to ribosomal-protein-serine N-acetyltransferase,P13857) Ribosomal-protein-serine acetyltransferase (EC 2.3.1.-) (Acetylating enzyme for N-terminal of ribosomal protein L7/L12),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 2003697 7550964 Sca_1989 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635079.1 2003143 R 396513 CDS YP_002635080.1 224477474 7550965 2003821..2004570 1 NC_012121.1 similar to 2-pyrone-4,6-dicarboxylate hydrolase (Coxiella burnetii),(Q9ZNL9) Pesticidial crystal protein cry9Ea (Insecticidal delta-endotoxin CryIXE(a)) (Crystaline entomocidal protoxin) (130 kDa crystal protein); Hypothetical protein; hypothetical protein 2004570 7550965 Sca_1990 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635080.1 2003821 D 396513 CDS YP_002635081.1 224477475 7550966 complement(2004662..2006404) 1 NC_012121.1 catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase 2006404 7550966 Sca_1991 Staphylococcus carnosus subsp. carnosus TM300 pyruvate oxidase YP_002635081.1 2004662 R 396513 CDS YP_002635082.1 224477476 7550967 complement(2006516..2007202) 1 NC_012121.1 (P60637) Holin-like protein cidB,InterPro: LrgB-like protein; Hypothetical protein; hypothetical protein 2007202 7550967 Sca_1992 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635082.1 2006516 R 396513 CDS YP_002635083.1 224477477 7550968 complement(2007199..2007585) 1 NC_012121.1 (P60645) Holin-like protein cidA,InterPro: LrgA family; Hypothetical protein; hypothetical protein 2007585 7550968 Sca_1993 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635083.1 2007199 R 396513 CDS YP_002635084.1 224477478 7550969 complement(2007892..2008779) 1 NC_012121.1 (P39592) Putative HTH-type transcriptional regulator ywbI,InterPro: LysR substrate binding domain; Hypothetical protein; LysR family transcriptional regulator 2008779 7550969 Sca_1994 Staphylococcus carnosus subsp. carnosus TM300 LysR family transcriptional regulator YP_002635084.1 2007892 R 396513 CDS YP_002635085.1 224477479 7550970 complement(2008907..2010082) 1 NC_012121.1 (P75831) Macrolide-specific ABC-type efflux carrier,InterPro: Protein of unknown function DUF214; Hypothetical protein; putative permease 2010082 7550970 Sca_1995 Staphylococcus carnosus subsp. carnosus TM300 putative permease YP_002635085.1 2008907 R 396513 CDS YP_002635086.1 224477480 7550971 complement(2010079..2010759) 1 NC_012121.1 (Q58206) ABC transporter ATP-binding protein MJ0796,InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 2010759 7550971 Sca_1996 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002635086.1 2010079 R 396513 CDS YP_002635087.1 224477481 7550972 complement(2010756..2011853) 1 NC_012121.1 (P76397) Hypothetical protein yegM precursor; Hypothetical protein; hypothetical protein 2011853 7550972 Sca_1997 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635087.1 2010756 R 396513 CDS YP_002635088.1 224477482 7550973 2012099..2012581 1 NC_012121.1 Hypothetical protein; hypothetical protein 2012581 7550973 Sca_1998 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635088.1 2012099 D 396513 CDS YP_002635089.1 224477483 7550974 2012817..2013638 1 NC_012121.1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; hypothetical protein 2013638 7550974 Sca_1999 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635089.1 2012817 D 396513 CDS YP_002635090.1 224477484 7550975 complement(2013675..2014187) 1 NC_012121.1 (Q8PY44) Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase),InterPro: Methylated-DNA-[protein]-cysteine S-methyltransferase; Hypothetical protein; putative methylated DNA-protein cysteine methyltransferase 2014187 adaB 7550975 adaB Staphylococcus carnosus subsp. carnosus TM300 putative methylated DNA-protein cysteine methyltransferase YP_002635090.1 2013675 R 396513 CDS YP_002635091.1 224477485 7551369 complement(2014323..2014505) 1 NC_012121.1 truncated orf,small local similarity to:,(P80544) Surface protein precursor (Plasmin-sensitive surface protein) (230 kDa cell-wall protein),InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein; hypothetical protein 2014505 7551369 Sca_2001 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635091.1 2014323 R 396513 CDS YP_002635092.1 224477486 7550976 2014633..2015643 1 NC_012121.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase 2015643 bioB 7550976 bioB Staphylococcus carnosus subsp. carnosus TM300 biotin synthase YP_002635092.1 2014633 D 396513 CDS YP_002635093.1 224477487 7551443 complement(2015689..2016297) 1 NC_012121.1 (P53109) Hypothetical 65.8 kDa protein in SUT1-RCK1 intergenic region,InterPro: Sortase protein; Hypothetical protein; sortase protein 2016297 srtA 7551443 srtA Staphylococcus carnosus subsp. carnosus TM300 sortase protein YP_002635093.1 2015689 R 396513 CDS YP_002635094.1 224477488 7552145 2016447..2016713 1 NC_012121.1 Hypothetical protein; hypothetical protein 2016713 7552145 Sca_2004 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635094.1 2016447 D 396513 CDS YP_002635095.1 224477489 7550977 complement(2016761..2017060) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2017060 7550977 Sca_2005 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635095.1 2016761 R 396513 CDS YP_002635096.1 224477490 7550978 2017270..2017896 1 NC_012121.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2017896 7550978 Sca_2006 Staphylococcus carnosus subsp. carnosus TM300 azoreductase YP_002635096.1 2017270 D 396513 CDS YP_002635097.1 224477491 7550979 complement(2017945..2018895) 1 NC_012121.1 (Q8ZGY6) Zinc transporter zitB,InterPro: Cation efflux protein; Hypothetical protein; putative cation efflux system protein 2018895 7550979 Sca_2007 Staphylococcus carnosus subsp. carnosus TM300 putative cation efflux system protein YP_002635097.1 2017945 R 396513 CDS YP_002635098.1 224477492 7550980 complement(2018984..2020414) 1 NC_012121.1 (Q04605) Hypothetical protein in chlN 3region (URF2) (Fragment),InterPro: Protein of unknown function DUF344; Hypothetical protein; hypothetical protein 2020414 7550980 Sca_2008 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635098.1 2018984 R 396513 CDS YP_002635099.1 224477493 7550981 complement(2020572..2021441) 1 NC_012121.1 (Q87PM1) Hypothetical protein VP1481,InterPro: Fructosamine kinase; Hypothetical protein; hypothetical protein 2021441 7550981 Sca_2009 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635099.1 2020572 R 396513 CDS YP_002635100.1 224477494 7550982 2021669..2022691 1 NC_012121.1 local similarity to regulatory protein (pfoS/R) (Bacillus cereus),(P19357) Solute carrier family 2 facilitated glucose transporter member 4 (Glucose transporter type 4 insulin-responsive),InterPro: Phosphotransferase system EIIC; Hypothetical protein; hypothetical protein 2022691 7550982 Sca_2010 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635100.1 2021669 D 396513 CDS YP_002635101.1 224477495 7550983 complement(2022804..2023994) 1 NC_012121.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 2023994 drm 7550983 drm Staphylococcus carnosus subsp. carnosus TM300 phosphopentomutase YP_002635101.1 2022804 R 396513 CDS YP_002635102.1 224477496 7551541 complement(2024033..2025334) 1 NC_012121.1 (P77836) Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) (PYNP),InterPro: Thymidine/pyrimidine-nucleoside phosphorylase; Conserved hypothetical protein; putative pyrimidine nucleoside phosphorylase 2025334 pdp 7551541 pdp Staphylococcus carnosus subsp. carnosus TM300 putative pyrimidine nucleoside phosphorylase YP_002635102.1 2024033 R 396513 CDS YP_002635103.1 224477497 7551920 2025595..2026599 1 NC_012121.1 (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740,InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein; putative alcohol dehydrogenase, zinc-containing 2026599 7551920 Sca_2013 Staphylococcus carnosus subsp. carnosus TM300 putative alcohol dehydrogenase, zinc-containing YP_002635103.1 2025595 D 396513 CDS YP_002635104.1 224477498 7550984 complement(2026700..2027101) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2027101 7550984 Sca_2014 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635104.1 2026700 R 396513 CDS YP_002635105.1 224477499 7550985 complement(2027224..2027820) 1 NC_012121.1 (Q92A77) Menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-),InterPro: UbiE/COQ5 methyltransferase; Conserved hypothetical protein; putative SAM-dependent methyltransferase 2027820 7550985 Sca_2015 Staphylococcus carnosus subsp. carnosus TM300 putative SAM-dependent methyltransferase YP_002635105.1 2027224 R 396513 CDS YP_002635106.1 224477500 7550986 complement(2027911..2028666) 1 NC_012121.1 (O68575) Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) (PFL-activating enzyme),InterPro: Radical SAM; High confidence in function and specificity; formate acetyltransferase activating enzyme 2028666 pflA 7550986 pflA Staphylococcus carnosus subsp. carnosus TM300 formate acetyltransferase activating enzyme YP_002635106.1 2027911 R 396513 CDS YP_002635107.1 224477501 7551930 complement(2028731..2030980) 1 NC_012121.1 (P09373) Formate acetyltransferase 1 (EC 2.3.1.54) (Pyruvate formate-lyase 1),InterPro: Formate acetyltransferase; High confidence in function and specificity; formate acetyltransferase 2030980 pflB 7551930 pflB Staphylococcus carnosus subsp. carnosus TM300 formate acetyltransferase YP_002635107.1 2028731 R 396513 CDS YP_002635108.1 224477502 7551931 complement(2031251..2031622) 1 NC_012121.1 (P76243) Hypothetical protein yeaO,InterPro: Protein of unknown function DUF488; Hypothetical protein; hypothetical protein 2031622 7551931 Sca_2018 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635108.1 2031251 R 396513 CDS YP_002635109.1 224477503 7550987 complement(2032725..2033174) 1 NC_012121.1 (P54493) Hypothetical protein yqgP; Hypothetical protein; hypothetical protein 2033174 7550987 Sca_2019 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635109.1 2032725 R 396513 CDS YP_002635110.1 224477504 7550988 complement(2033183..2033626) 1 NC_012121.1 (Q82Z76) Sensory transduction protein lytT,InterPro: LytTr DNA-binding region; Hypothetical protein; hypothetical protein 2033626 7550988 Sca_2020 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635110.1 2033183 R 396513 CDS YP_002635111.1 224477505 7550989 complement(2033803..2034126) 1 NC_012121.1 similar to C-terminal part (aa 135-236) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03778):238 aa,(P44068) Protein HI0882; Hypothetical protein; hypothetical protein 2034126 7550989 Sca_2021 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635111.1 2033803 R 396513 CDS YP_002635112.1 224477506 7550990 complement(2034133..2034528) 1 NC_012121.1 similar to N-terminal part (aa 1-131) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE0377): 238 aa ,(P44068) Protein HI0882; Hypothetical protein; hypothetical protein 2034528 7550990 Sca_2022 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635112.1 2034133 R 396513 CDS YP_002635113.1 224477507 7550991 complement(2034612..2035529) 1 NC_012121.1 (O32975) Probable cysteine desulfurase 1 (EC 2.8.1.7); Hypothetical protein; hypothetical protein 2035529 7550991 Sca_2023 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635113.1 2034612 R 396513 CDS YP_002635114.1 224477508 7550992 complement(2035638..2036060) 1 NC_012121.1 (Q50777) Hypothetical 16.1 kDa protein in MTR region (ORF143),InterPro: Usp domain; Hypothetical protein; hypothetical protein 2036060 7550992 Sca_2024 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635114.1 2035638 R 396513 CDS YP_002635115.1 224477509 7550993 complement(2036209..2037075) 1 NC_012121.1 (Q05852) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) (General stress protein 33) (GSP33),InterPro: Nucleotidyl transferase; High confidence in function and specificity; UTP-glucose-1-phosphate uridyltransferase 2037075 gtaB 7550993 gtaB Staphylococcus carnosus subsp. carnosus TM300 UTP-glucose-1-phosphate uridyltransferase YP_002635115.1 2036209 R 396513 CDS YP_002635116.1 224477510 7551669 complement(2037449..2039332) 1 NC_012121.1 (P39853) Capsular polysaccharide biosynthesis protein capD,InterPro: Polysaccharide biosynthesis protein CapD; Conserved hypothetical protein; putative capsular polysaccharide synthesis enzyme 2039332 capD 7551669 capD Staphylococcus carnosus subsp. carnosus TM300 putative capsular polysaccharide synthesis enzyme YP_002635116.1 2037449 R 396513 CDS YP_002635117.1 224477511 7551456 complement(2039452..2040198) 1 NC_012121.1 similar to capA, capsular polysaccharide synthesis enzyme (chain length regulator),(P71050) Hypothetical protein yveK,InterPro: Lipopolysaccharide biosynthesis; Hypothetical protein; hypothetical protein 2040198 7551456 Sca_2027 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635117.1 2039452 R 396513 CDS YP_002635118.1 224477512 7550994 2040753..2040989 1 NC_012121.1 (Q57987) Hypothetical protein MJ0567,InterPro: FeoA; Hypothetical protein; hypothetical protein 2040989 7550994 Sca_2028 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635118.1 2040753 D 396513 CDS YP_002635119.1 224477513 7550995 2040982..2042976 1 NC_012121.1 (Q57986) Ferrous iron transport protein B homolog,InterPro: Ferrous iron transport protein B; Conserved hypothetical protein; putative ferrous iron transport protein B 2042976 feoB 7550995 feoB Staphylococcus carnosus subsp. carnosus TM300 putative ferrous iron transport protein B YP_002635119.1 2040982 D 396513 CDS YP_002635120.1 224477514 7551571 2042989..2043165 1 NC_012121.1 Hypothetical protein; hypothetical protein 2043165 7551571 Sca_2030 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635120.1 2042989 D 396513 CDS YP_002635121.1 224477515 7550996 2043370..2043708 1 NC_012121.1 putative transcriptional regulator,(P39044) Hypothetical protein X,InterPro: Transcriptional regulator PadR-like family; Hypothetical protein; hypothetical protein 2043708 7550996 Sca_2031 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635121.1 2043370 D 396513 CDS YP_002635122.1 224477516 7550997 2043698..2044477 1 NC_012121.1 similarity to serine/threonine protein phosphatase (Bacillus),(Q8EB91) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein; hypothetical protein 2044477 7550997 Sca_2032 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635122.1 2043698 D 396513 CDS YP_002635123.1 224477517 7550998 complement(2044527..2045135) 1 NC_012121.1 similarity to serine/threonine protein phosphatase (Bacillus),(Q8EB91) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein; hypothetical protein 2045135 7550998 Sca_2033 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635123.1 2044527 R 396513 CDS YP_002635124.1 224477518 7550999 complement(2045246..2045821) 1 NC_012121.1 (P09454) Ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) (Acetylating enzyme for N-terminal of ribosomal protein S5),InterPro: GCN5-related N-acetyltransferase; Conserved hypothetical protein; putative GNAT family acetyltransferase 2045821 7550999 Sca_2034 Staphylococcus carnosus subsp. carnosus TM300 putative GNAT family acetyltransferase YP_002635124.1 2045246 R 396513 CDS YP_002635125.1 224477519 7551000 2045943..2046122 1 NC_012121.1 similarity to hypothetical protein (Staph aureus); Hypothetical protein; hypothetical protein 2046122 7551000 Sca_2035 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635125.1 2045943 D 396513 CDS YP_002635126.1 224477520 7551001 complement(2046174..2047670) 1 NC_012121.1 (P39211) Xylulose kinase (EC 2.7.1.17) (Xylulokinase),InterPro: Xylulokinase; Conserved hypothetical protein; putative xylulokinase 2047670 xylB 7551001 xylB Staphylococcus carnosus subsp. carnosus TM300 putative xylulokinase YP_002635126.1 2046174 R 396513 CDS YP_002635127.1 224477521 7552303 complement(2047848..2049077) 1 NC_012121.1 (Q8R7S2) Probable manganese transport protein mntH; Hypothetical protein; hypothetical protein 2049077 7552303 Sca_2037 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635127.1 2047848 R 396513 CDS YP_002635128.1 224477522 7551002 complement(2049081..2049839) 1 NC_012121.1 (Q9V005) Hypothetical UPF0271 protein PYRAB09930,InterPro: LamB/YcsF family; Hypothetical protein; LamB/YcsF family protein 2049839 7551002 Sca_2038 Staphylococcus carnosus subsp. carnosus TM300 LamB/YcsF family protein YP_002635128.1 2049081 R 396513 CDS YP_002635129.1 224477523 7551003 complement(2049841..2051199) 1 NC_012121.1 (Q96RQ3) Methylcrotonyl-CoA carboxylase alpha chain mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase alpha subunit),InterPro: Carbamoyl-phosphate synthase L chain ATP-binding; Conserved hypothetical protein; putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC 2051199 7551003 Sca_2039 Staphylococcus carnosus subsp. carnosus TM300 putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC YP_002635129.1 2049841 R 396513 CDS YP_002635130.1 224477524 7551004 complement(2051215..2051658) 1 NC_012121.1 (Q9PKR5) Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP),InterPro: Biotin/lipoyl attachment; Hypothetical protein; putative biotin carboxyl carrier protein of acetyl-CoA carboxylase 2051658 7551004 Sca_2040 Staphylococcus carnosus subsp. carnosus TM300 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase YP_002635130.1 2051215 R 396513 CDS YP_002635131.1 224477525 7551005 complement(2051658..2052665) 1 NC_012121.1 (P75745) Hypothetical protein ybgK,InterPro: Urea amidolyase-related; Hypothetical protein; hypothetical protein 2052665 7551005 Sca_2041 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635131.1 2051658 R 396513 CDS YP_002635132.1 224477526 7551006 complement(2052655..2053386) 1 NC_012121.1 (P60495) Kinase A inhibitor (Sporulation inhibitor kipI),InterPro: Protein of unknown function DUF213; Hypothetical protein; hypothetical protein 2053386 7551006 Sca_2042 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635132.1 2052655 R 396513 CDS YP_002635133.1 224477527 7551007 complement(2053953..2055023) 1 NC_012121.1 similar to regulatory protein pfoS/R; Hypothetical protein; hypothetical protein 2055023 7551007 Sca_2043 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635133.1 2053953 R 396513 CDS YP_002635134.1 224477528 7551008 2055410..2056753 1 NC_012121.1 (Q03646) Merozoite surface antigen 2 precursor (MSA-2),InterPro: Uncharacterized iron-regulated membrane protein DUF337; Hypothetical protein; hypothetical protein 2056753 7551008 Sca_2044 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635134.1 2055410 D 396513 CDS YP_002635135.1 224477529 7551009 complement(2056805..2057182) 1 NC_012121.1 (P41900) Transcription initiation factor IIF beta subunit (TFIIF-beta); Conserved hypothetical protein; hypothetical protein 2057182 7551009 Sca_2045 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635135.1 2056805 R 396513 CDS YP_002635136.1 224477530 7551010 complement(2057302..2058522) 1 NC_012121.1 (Q8VCL5) Putative transporter C20orf59 homolog,InterPro: General substrate transporter; Hypothetical protein; putative metabolite transport protein 2058522 7551010 Sca_2046 Staphylococcus carnosus subsp. carnosus TM300 putative metabolite transport protein YP_002635136.1 2057302 R 396513 CDS YP_002635137.1 224477531 7551011 complement(2058699..2059472) 1 NC_012121.1 similar to C-terminal part (110-366) of putative truncated ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305](YP_302396): 368 aa,(P76242) Hypothetical transport protein yeaN,InterPro: Major facilitator superfamily; Hypothetical protein; putative permease (fragment 2) 2059472 7551011 Sca_2047 Staphylococcus carnosus subsp. carnosus TM300 putative permease (fragment 2) YP_002635137.1 2058699 R 396513 CDS YP_002635138.1 224477532 7551012 complement(2059469..2059921) 1 NC_012121.1 Similar to N-terminal part (aa 1-108) of putative truncated ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_302396): 368 aa; Hypothetical protein; putative permease (fragment 1) 2059921 7551012 Sca_2048 Staphylococcus carnosus subsp. carnosus TM300 putative permease (fragment 1) YP_002635138.1 2059469 R 396513 CDS YP_002635139.1 224477533 7551013 complement(2060076..2061017) 1 NC_012121.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2061017 arcC 7551013 arcC Staphylococcus carnosus subsp. carnosus TM300 carbamate kinase YP_002635139.1 2060076 R 396513 CDS YP_002635140.1 224477534 7551405 complement(2061010..2061795) 1 NC_012121.1 (P77297) Hypothetical protein yahE; Hypothetical protein; hypothetical protein 2061795 7551405 Sca_2050 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635140.1 2061010 R 396513 CDS YP_002635141.1 224477535 7551014 complement(2061792..2063057) 1 NC_012121.1 (P77129) Hypothetical protein ylbE; Hypothetical protein; hypothetical protein 2063057 7551014 Sca_2051 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635141.1 2061792 R 396513 CDS YP_002635142.1 224477536 7551015 complement(2063057..2064808) 1 NC_012121.1 multicopy suppressor of dominant negative ftsH mutations; membrane protein FdrA 2064808 fdrA 7551015 fdrA Staphylococcus carnosus subsp. carnosus TM300 membrane protein FdrA YP_002635142.1 2063057 R 396513 CDS YP_002635143.1 224477537 7551567 complement(2064824..2065873) 1 NC_012121.1 (P58408) Ureidoglycolate dehydrogenase (EC 1.1.1.154),InterPro: Malate/L-lactate dehydrogenase; Hypothetical protein; putative ureidoglycolate dehydrogenase 2065873 allD 7551567 allD Staphylococcus carnosus subsp. carnosus TM300 putative ureidoglycolate dehydrogenase YP_002635143.1 2064824 R 396513 CDS YP_002635144.1 224477538 7551388 complement(2065977..2067008) 1 NC_012121.1 (O34736) Hypothetical oxidoreductase yjmC (EC 1.1.1.-),InterPro: Malate/L-lactate dehydrogenase; Hypothetical protein; putative ureidoglycolate dehydrogenase 2067008 allD 7551388 allD Staphylococcus carnosus subsp. carnosus TM300 putative ureidoglycolate dehydrogenase YP_002635144.1 2065977 R 396513 CDS YP_002635145.1 224477539 7551389 complement(2067025..2067813) 1 NC_012121.1 (P75713) Hypothetical protein ylbA; Hypothetical protein; hypothetical protein 2067813 7551389 Sca_2055 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635145.1 2067025 R 396513 CDS YP_002635146.1 224477540 7551016 complement(2067839..2069071) 1 NC_012121.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2069071 7551016 Sca_2056 Staphylococcus carnosus subsp. carnosus TM300 allantoate amidohydrolase YP_002635146.1 2067839 R 396513 CDS YP_002635147.1 224477541 7551017 2069258..2069719 1 NC_012121.1 (O35678) Monoglyceride lipase (EC 3.1.1.23),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; hypothetical protein 2069719 7551017 Sca_2057 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635147.1 2069258 D 396513 CDS YP_002635148.1 224477542 7551018 2069725..2070093 1 NC_012121.1 (Q86WA6) Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase) (Biphenyl hydrolase-like protein) (Biphenyl hydrolase-related protein) (Bph-rp) (Breast epithelial mucin-associated antigen) (MCNAA); Hypothetical protein; hypothetical protein 2070093 7551018 Sca_2058 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635148.1 2069725 D 396513 CDS YP_002635149.1 224477543 7551019 complement(2070214..2071344) 1 NC_012121.1 (P77671) Allantoinase (EC 3.5.2.5),InterPro: Amidohydrolase; Conserved hypothetical protein; putative allantoinase 2071344 allB 7551019 allB Staphylococcus carnosus subsp. carnosus TM300 putative allantoinase YP_002635149.1 2070214 R 396513 CDS YP_002635150.1 224477544 7551387 complement(2071341..2071580) 1 NC_012121.1 Truncated ORF.,Local similarity to:,(P77671) Allantoinase (EC 3.5.2.5),InterPro: Dihydroorotase region; Hypothetical protein; hypothetical protein 2071580 7551387 Sca_2060 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635150.1 2071341 R 396513 CDS YP_002635151.1 224477545 7551020 complement(2071570..2073057) 1 NC_012121.1 (P75712) Putative allantoin permease (Allantoin transport protein),InterPro: Permease for cytosine/purines uracil thiamine allantoin; Conserved hypothetical protein; allantoin permease 2073057 7551020 Sca_2061 Staphylococcus carnosus subsp. carnosus TM300 allantoin permease YP_002635151.1 2071570 R 396513 CDS YP_002635152.1 224477546 7551021 2073249..2074871 1 NC_012121.1 similar to (O32138) Purine catabolism regulatory protein; Conserved hypothetical protein; hypothetical protein 2074871 7551021 Sca_2062 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635152.1 2073249 D 396513 CDS YP_002635153.1 224477547 7551022 2074999..2076243 1 NC_012121.1 (Q57051) Protein HI0588,InterPro: Peptidase M20/M25/M40; Conserved hypothetical protein; putative N-carbamoyl-beta-alanine amidohydrolase 2076243 amaB 7551022 amaB Staphylococcus carnosus subsp. carnosus TM300 putative N-carbamoyl-beta-alanine amidohydrolase YP_002635153.1 2074999 D 396513 CDS YP_002635154.1 224477548 7551393 complement(2076291..2076944) 1 NC_012121.1 similar to transcriptional regulator, MerR family,Incomplete alignment.,Similar to MerR family regulatory protein,(P32184) HTH-type transcriptional activator tipA; Hypothetical protein; hypothetical protein 2076944 7551393 Sca_2064 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635154.1 2076291 R 396513 CDS YP_002635155.1 224477549 7551023 2077289..2078224 1 NC_012121.1 (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase),InterPro: NAD-dependent epimerase/dehydratase; Conserved hypothetical protein; putative UDP-glucose 4-epimerase 2078224 7551023 Sca_2065 Staphylococcus carnosus subsp. carnosus TM300 putative UDP-glucose 4-epimerase YP_002635155.1 2077289 D 396513 CDS YP_002635156.1 224477550 7551024 complement(2078410..2079114) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2079114 7551024 Sca_2066 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635156.1 2078410 R 396513 CDS YP_002635157.1 224477551 7551025 complement(2079191..2081032) 1 NC_012121.1 (Q50644) Hypothetical protein Rv2577/MT2654,InterPro: Metallo-phosphoesterase; Hypothetical protein; hypothetical protein 2081032 7551025 Sca_2067 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635157.1 2079191 R 396513 CDS YP_002635158.1 224477552 7551026 complement(2081341..2082498) 1 NC_012121.1 (O34450) N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (GlcNAc 6-P deacetylase),InterPro: N-acetylglucosamine-6-phosphate deacetylase; Conserved hypothetical protein; putative N-acetylglucosamine-6-phosphate deacetylase 2082498 nagA 7551026 nagA Staphylococcus carnosus subsp. carnosus TM300 putative N-acetylglucosamine-6-phosphate deacetylase YP_002635158.1 2081341 R 396513 CDS YP_002635159.1 224477553 7551842 complement(2082691..2083158) 1 NC_012121.1 (P17407) 21 kDa protein precursor (1.2 protein); Hypothetical protein; hypothetical protein 2083158 7551842 Sca_2069 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635159.1 2082691 R 396513 CDS YP_002635160.1 224477554 7551027 complement(2083237..2083671) 1 NC_012121.1 (P75260) Hypothetical UPF0134 protein MPN138 (E07_orf166); Hypothetical protein; hypothetical protein 2083671 7551027 Sca_2070 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635160.1 2083237 R 396513 CDS YP_002635161.1 224477555 7551028 complement(2083921..2084802) 1 NC_012121.1 (Q50648) Putative 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR),InterPro: Ketopantoate reductase ApbA/PanE; Conserved hypothetical protein; 2-dehydropantoate 2-reductase 2084802 7551028 Sca_2071 Staphylococcus carnosus subsp. carnosus TM300 2-dehydropantoate 2-reductase YP_002635161.1 2083921 R 396513 CDS YP_002635162.1 224477556 7551029 2084870..2085682 1 NC_012121.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2085682 panB 7551029 panB Staphylococcus carnosus subsp. carnosus TM300 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002635162.1 2084870 D 396513 CDS YP_002635163.1 224477557 7551899 2085679..2086539 1 NC_012121.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2086539 panC 7551899 panC Staphylococcus carnosus subsp. carnosus TM300 pantoate--beta-alanine ligase YP_002635163.1 2085679 D 396513 CDS YP_002635164.1 224477558 7551900 2086532..2086915 1 NC_012121.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2086915 panD 7551900 panD Staphylococcus carnosus subsp. carnosus TM300 aspartate alpha-decarboxylase YP_002635164.1 2086532 D 396513 CDS YP_002635165.1 224477559 7551901 complement(2087247..2088092) 1 NC_012121.1 low similarity to:,(P04188) Glutamyl endopeptidase precursor (EC 3.4.21.19) (Staphylococcal serine proteinase) (V8 proteinase) (Endoproteinase Glu-C); Hypothetical protein; hypothetical protein 2088092 7551901 Sca_2075 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635165.1 2087247 R 396513 CDS YP_002635166.1 224477560 7551030 2088657..2089127 1 NC_012121.1 similar to:,(P25053) Regulatory protein tenI,InterPro: Thiamine monophosphate synthase; Hypothetical protein; hypothetical protein 2089127 7551030 Sca_2076 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635166.1 2088657 D 396513 CDS YP_002635167.1 224477561 7551031 2089131..2090258 1 NC_012121.1 (O31616) Glycine oxidase (EC 1.4.3.19),InterPro: FAD dependent oxidoreductase; Conserved hypothetical protein; putative glycine oxidase 2090258 goxB 7551031 goxB Staphylococcus carnosus subsp. carnosus TM300 putative glycine oxidase YP_002635167.1 2089131 D 396513 CDS YP_002635168.1 224477562 7551660 2090242..2090442 1 NC_012121.1 similar to thiamin biosynthesis ThiS [KO:K03154],(P49535) Hypothetical 8.5 kDa protein ycf40 (ORF73),InterPro: ThiamineS; Hypothetical protein; hypothetical protein 2090442 7551660 Sca_2078 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635168.1 2090242 D 396513 CDS YP_002635169.1 224477563 7551032 2090444..2091211 1 NC_012121.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 2091211 thiG 7551032 thiG Staphylococcus carnosus subsp. carnosus TM300 thiazole synthase YP_002635169.1 2090444 D 396513 CDS YP_002635170.1 224477564 7552179 2091208..2092260 1 NC_012121.1 (P12282) Molybdopterin biosynthesis protein moeB,InterPro: UBA/THIF-type NAD/FAD binding fold; Hypothetical protein; putative molybdopterin biosynthesis protein MoeB 2092260 7552179 Sca_2080 Staphylococcus carnosus subsp. carnosus TM300 putative molybdopterin biosynthesis protein MoeB YP_002635170.1 2091208 D 396513 CDS YP_002635171.1 224477565 7551033 complement(2092418..2092639) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2092639 7551033 Sca_2081 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635171.1 2092418 R 396513 CDS YP_002635172.1 224477566 7551034 2092954..2093406 1 NC_012121.1 (P46908) Anaerobic regulatory protein,InterPro: Cyclic nucleotide-binding domain; Conserved hypothetical protein; putative transcriptional regulator protein 2093406 7551034 Sca_2082 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator protein YP_002635172.1 2092954 D 396513 CDS YP_002635173.1 224477567 7551035 complement(2093451..2094122) 1 NC_012121.1 (P46908) Anaerobic regulatory protein,InterPro: Cyclic nucleotide-binding domain; Conserved hypothetical protein; putative transcriptional regulator protein 2094122 7551035 Sca_2083 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator protein YP_002635173.1 2093451 R 396513 CDS YP_002635174.1 224477568 7551036 complement(2094403..2095833) 1 NC_012121.1 (Q46170) Arginine/ornithine antiporter,InterPro: Arginine/ornithine antiporter; Conserved hypothetical protein; putative arginine/ornithine antiporter 2095833 arcD 7551036 arcD Staphylococcus carnosus subsp. carnosus TM300 putative arginine/ornithine antiporter YP_002635174.1 2094403 R 396513 CDS YP_002635175.1 224477569 7551408 complement(2096113..2097348) 1 NC_012121.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 2097348 arcA 7551408 arcA Staphylococcus carnosus subsp. carnosus TM300 arginine deiminase YP_002635175.1 2096113 R 396513 CDS YP_002635176.1 224477570 7551403 complement(2097775..2099004) 1 NC_012121.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 2099004 arcA 7551403 arcA Staphylococcus carnosus subsp. carnosus TM300 arginine deiminase YP_002635176.1 2097775 R 396513 CDS YP_002635177.1 224477571 7551404 complement(2099124..2099843) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2099843 7551404 Sca_2087 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635177.1 2099124 R 396513 CDS YP_002635178.1 224477572 7551037 complement(2099844..2100992) 1 NC_012121.1 (P77525) Probable beta-ketoadipyl CoA thiolase (EC 2.3.1.-),InterPro: Thiolase; Hypothetical protein; putative acetyl-CoA c-acetyltransferase 2100992 vraB 7551037 vraB Staphylococcus carnosus subsp. carnosus TM300 putative acetyl-CoA c-acetyltransferase YP_002635178.1 2099844 R 396513 CDS YP_002635179.1 224477573 7552297 complement(2100999..2102423) 1 NC_012121.1 (P58730) O-succinylbenzoate--CoA ligase (EC 6.2.1.26) (OSB-CoA synthetase) (O-succinylbenzoyl-CoA synthetase),InterPro: AMP-dependent synthetase and ligase; Conserved hypothetical protein; putative Co-A ligase 2102423 vraA 7552297 vraA Staphylococcus carnosus subsp. carnosus TM300 putative Co-A ligase YP_002635179.1 2100999 R 396513 CDS YP_002635180.1 224477574 7552296 2102660..2103541 1 NC_012121.1 (P09392) Glycerol-3-phosphate regulon repressor; Hypothetical protein; hypothetical protein 2103541 7552296 Sca_2090 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635180.1 2102660 D 396513 CDS YP_002635181.1 224477575 7551038 2103650..2104321 1 NC_012121.1 (P60527) 2-haloalkanoic acid dehalogenase (EC 3.8.1.2) (L-2-haloacid dehalogenase) (Halocarboxylic acid halidohydrolase) (L-DEX) (Cryptic L-isomer-specific dehalogenase) (DhlS5I),InterPro: Haloacid dehalogenase-like hydrolase; Conserved hypothetical protein; putative 2-haloalkanoic acid dehalogenase 2104321 7551038 Sca_2091 Staphylococcus carnosus subsp. carnosus TM300 putative 2-haloalkanoic acid dehalogenase YP_002635181.1 2103650 D 396513 CDS YP_002635182.1 224477576 7551039 2104644..2106092 1 NC_012121.1 similar to immunoglobulin G binding protein A precursor,(Q21313) Laminin-like protein K08C7.3 precursor,InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein; hypothetical protein 2106092 7551039 Sca_2092 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635182.1 2104644 D 396513 CDS YP_002635183.1 224477577 7551040 complement(2106206..2106985) 1 NC_012121.1 similar to dehydrogenase/reductase,(P87219) Sorbitol utilization protein SOU1,InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; hypothetical protein 2106985 7551040 Sca_2093 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635183.1 2106206 R 396513 CDS YP_002635184.1 224477578 7551041 complement(2107006..2108259) 1 NC_012121.1 (O52717) Ribitol transporter,InterPro: General substrate transporter,Major facilitator superfamily; Hypothetical protein; putative alpha-ketoglutarate permease 2108259 7551041 Sca_2094 Staphylococcus carnosus subsp. carnosus TM300 putative alpha-ketoglutarate permease YP_002635184.1 2107006 R 396513 CDS YP_002635185.1 224477579 7551042 complement(2108340..2109947) 1 NC_012121.1 (P44401) Xylulose kinase (EC 2.7.1.17) (Xylulokinase),InterPro: Carbohydrate kinase FGGY; Conserved hypothetical protein; putative xylulokinase 2109947 xylB 7551042 xylB Staphylococcus carnosus subsp. carnosus TM300 putative xylulokinase YP_002635185.1 2108340 R 396513 CDS YP_002635186.1 224477580 7552304 complement(2110273..2111391) 1 NC_012121.1 (P37624) Hypothetical ABC transporter ATP-binding protein yhiH; Hypothetical protein; putative ABC transporter 2111391 7552304 Sca_2096 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter YP_002635186.1 2110273 R 396513 CDS YP_002635187.1 224477581 7551043 complement(2111381..2112115) 1 NC_012121.1 (P75776) Hypothetical ABC transporter ATP-binding protein ybhF; Conserved hypothetical protein; putative ABC transporter 2112115 7551043 Sca_2097 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter YP_002635187.1 2111381 R 396513 CDS YP_002635188.1 224477582 7551044 complement(2112261..2112782) 1 NC_012121.1 N terminal similar to rrf2 family protein, putative transcriptional regulator,(Q9R9M8) AAU3 protein precursor,InterPro: Protein of unknown function UPF0074; Hypothetical protein; hypothetical protein 2112782 7551044 Sca_2098 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635188.1 2112261 R 396513 CDS YP_002635189.1 224477583 7551045 complement(2112977..2113528) 1 NC_012121.1 (O28938) Hypothetical protein AF1331; Hypothetical protein; hypothetical protein 2113528 7551045 Sca_2099 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635189.1 2112977 R 396513 CDS YP_002635190.1 224477584 7551046 2113806..2115170 1 NC_012121.1 (P37062) NADH peroxidase (EC 1.11.1.1) (NPXase) (Npx),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Conserved hypothetical protein; putative NADH oxidase 2115170 7551046 Sca_2100 Staphylococcus carnosus subsp. carnosus TM300 putative NADH oxidase YP_002635190.1 2113806 D 396513 CDS YP_002635191.1 224477585 7551047 complement(2115258..2116400) 1 NC_012121.1 similar to CsbB stress response protein,(P57022) Bactoprenol glucosyl transferase (EC 2.4.1.-),InterPro: Glycosyl transferase family 2; Hypothetical protein; hypothetical protein 2116400 7551047 Sca_2101 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635191.1 2115258 R 396513 CDS YP_002635192.1 224477586 7551048 complement(2116876..2118372) 1 NC_012121.1 (P23240) Aldehyde dehydrogenase (EC 1.2.1.3),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein; putative aldehyde dehydrogenase 2118372 aldA 7551048 aldA Staphylococcus carnosus subsp. carnosus TM300 putative aldehyde dehydrogenase YP_002635192.1 2116876 R 396513 CDS YP_002635193.1 224477587 7551384 complement(2118699..2120231) 1 NC_012121.1 (P37685) Aldehyde dehydrogenase B (EC 1.2.1.22) (Lactaldehyde dehydrogenase),InterPro: Aldehyde dehydrogenase; Hypothetical protein; putative aldehyde dehydrogenase 2120231 aldA 7551384 aldA Staphylococcus carnosus subsp. carnosus TM300 putative aldehyde dehydrogenase YP_002635193.1 2118699 R 396513 CDS YP_002635194.1 224477588 7551385 complement(2120452..2121387) 1 NC_012121.1 (P77728) 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR),InterPro: Ketopantoate reductase ApbA/PanE; Conserved hypothetical protein; putative 2-dehydropantoate 2-reductase 2121387 apbA 7551385 apbA Staphylococcus carnosus subsp. carnosus TM300 putative 2-dehydropantoate 2-reductase YP_002635194.1 2120452 R 396513 CDS YP_002635195.1 224477589 7551395 complement(2121545..2122879) 1 NC_012121.1 (Q9UHI5) Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (hLAT2),InterPro: Amino acid permease-associated region; Conserved hypothetical protein; putative amino acid permease 2122879 7551395 Sca_2105 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid permease YP_002635195.1 2121545 R 396513 CDS YP_002635196.1 224477590 7551049 complement(2123244..2123546) 1 NC_012121.1 (P26388) Putative colanic acid biosynthesis glycosyl transferase wcaL (EC 2.-.-.-); Hypothetical protein; hypothetical protein 2123546 7551049 Sca_2106 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635196.1 2123244 R 396513 CDS YP_002635197.1 224477591 7551050 complement(2123583..2125790) 1 NC_012121.1 (P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein; putative teichoic acid biosynthesis protein 2125790 tagF2 7551050 tagF2 Staphylococcus carnosus subsp. carnosus TM300 putative teichoic acid biosynthesis protein YP_002635197.1 2123583 R 396513 CDS YP_002635198.1 224477592 7552163 complement(2126081..2126476) 1 NC_012121.1 (P27623) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D),InterPro: Cytidylyltransferase; Conserved hypothetical protein; putative teichoic acid biosynthesis protein D 2126476 tagD 7552163 tagD Staphylococcus carnosus subsp. carnosus TM300 putative teichoic acid biosynthesis protein D YP_002635198.1 2126081 R 396513 CDS YP_002635199.1 224477593 7552160 complement(2126494..2128671) 1 NC_012121.1 (P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein; putative teichoic acid biosynthesis protein F 2128671 tagF 7552160 tagF Staphylococcus carnosus subsp. carnosus TM300 putative teichoic acid biosynthesis protein F YP_002635199.1 2126494 R 396513 CDS YP_002635200.1 224477594 7552162 complement(2128781..2130274) 1 NC_012121.1 (P13484) Probable poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) (Major teichoic acid biosynthesis protein E),InterPro: Glycosyl transferase group 1; Conserved hypothetical protein; putative teichoic acid biosynthesis protein E 2130274 tagE 7552162 tagE Staphylococcus carnosus subsp. carnosus TM300 putative teichoic acid biosynthesis protein E YP_002635200.1 2128781 R 396513 CDS YP_002635201.1 224477595 7552161 complement(2130489..2130851) 1 NC_012121.1 (P37349) Protein ycgC,InterPro: PTS system fructose subfamily IIA component; Hypothetical protein; phosphotransferase mannnose-specific family component IIA 2130851 7552161 Sca_2111 Staphylococcus carnosus subsp. carnosus TM300 phosphotransferase mannnose-specific family component IIA YP_002635201.1 2130489 R 396513 CDS YP_002635202.1 224477596 7551051 complement(2130854..2131432) 1 NC_012121.1 (P43550) Dihydroxyacetone kinase 2 (EC 2.7.1.29) (Glycerone kinase 2) (DHA kinase 2),InterPro: Dak phosphatase domain; Hypothetical protein; hypothetical protein 2131432 7551051 Sca_2112 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635202.1 2130854 R 396513 CDS YP_002635203.1 224477597 7551052 complement(2131452..2132417) 1 NC_012121.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2132417 7551052 Sca_2113 Staphylococcus carnosus subsp. carnosus TM300 dihydroxyacetone kinase subunit DhaK YP_002635203.1 2131452 R 396513 CDS YP_002635204.1 224477598 7551053 2132662..2132916 1 NC_012121.1 Hypothetical protein; hypothetical protein 2132916 7551053 Sca_2114 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635204.1 2132662 D 396513 CDS YP_002635205.1 224477599 7551054 complement(2132953..2133303) 1 NC_012121.1 (P16680) PhnA protein,InterPro: PhnA protein; Hypothetical protein; putative alkylphosphonate utilization operon protein PhnA 2133303 phnA 7551054 phnA Staphylococcus carnosus subsp. carnosus TM300 putative alkylphosphonate utilization operon protein PhnA YP_002635205.1 2132953 R 396513 CDS YP_002635206.1 224477600 7551938 complement(2133489..2135078) 1 NC_012121.1 (P51798) Chloride channel protein 7 (ClC-7); Conserved hypothetical protein; putative ABC transporter membrane-spanning protein 2135078 7551938 Sca_2116 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter membrane-spanning protein YP_002635206.1 2133489 R 396513 CDS YP_002635207.1 224477601 7551055 complement(2135080..2135979) 1 NC_012121.1 (O52618) Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I),InterPro: ABC transporter; Conserved hypothetical protein; putative ABC transporter ATP-binding protein 2135979 7551055 Sca_2117 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002635207.1 2135080 R 396513 CDS YP_002635208.1 224477602 7551056 complement(2136125..2136556) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2136556 7551056 Sca_2118 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635208.1 2136125 R 396513 CDS YP_002635209.1 224477603 7551057 complement(2136553..2136759) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2136759 7551057 Sca_2119 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635209.1 2136553 R 396513 CDS YP_002635210.1 224477604 7551058 2137080..2138447 1 NC_012121.1 Similar to cycA, D-serine/D-alanine/glycine transporter (Pseudomonas putida),(P96704) Hypothetical transport protein ydgF,InterPro: Amino acid permease-associated region; Hypothetical protein; putative amino acid transporter 2138447 7551058 Sca_2120 Staphylococcus carnosus subsp. carnosus TM300 putative amino acid transporter YP_002635210.1 2137080 D 396513 CDS YP_002635211.1 224477605 7551059 complement(2138582..2139574) 1 NC_012121.1 catalyzes the formation of pyruvate from lactate; D-lactate dehydrogenase 2139574 ddh 7551059 ddh Staphylococcus carnosus subsp. carnosus TM300 D-lactate dehydrogenase YP_002635211.1 2138582 R 396513 CDS YP_002635212.1 224477606 7551517 complement(2139974..2140267) 1 NC_012121.1 (P23302) Integration host factor alpha-subunit (IHF-alpha); Hypothetical protein; hypothetical protein 2140267 7551517 Sca_2122 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635212.1 2139974 R 396513 CDS YP_002635213.1 224477607 7551060 complement(2140323..2140799) 1 NC_012121.1 (O05227) Na(+)/H(+) antiporter subunit G (Multiple resistance and pH homeostasis protein G) (Mrp complex subunit G),InterPro: Na+/H+ antiporter subunit; Hypothetical protein; putative Na(+)/H(+) antiporter subunit G 2140799 7551060 Sca_2123 Staphylococcus carnosus subsp. carnosus TM300 putative Na(+)/H(+) antiporter subunit G YP_002635213.1 2140323 R 396513 CDS YP_002635214.1 224477608 7551061 complement(2140777..2141073) 1 NC_012121.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit F 2141073 7551061 Sca_2124 Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit F YP_002635214.1 2140777 R 396513 CDS YP_002635215.1 224477609 7551062 complement(2141070..2141558) 1 NC_012121.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 2141558 7551062 Sca_2125 Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit E YP_002635215.1 2141070 R 396513 CDS YP_002635216.1 224477610 7551063 complement(2141558..2143054) 1 NC_012121.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit D 2143054 7551063 Sca_2126 Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit D YP_002635216.1 2141558 R 396513 CDS YP_002635217.1 224477611 7551064 complement(2143047..2143394) 1 NC_012121.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 2143394 7551064 Sca_2127 Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit C YP_002635217.1 2143047 R 396513 CDS YP_002635218.1 224477612 7551065 complement(2143391..2143816) 1 NC_012121.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit B 2143816 7551065 Sca_2128 Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit B YP_002635218.1 2143391 R 396513 CDS YP_002635219.1 224477613 7551066 complement(2143803..2146277) 1 NC_012121.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit A 2146277 7551066 Sca_2129 Staphylococcus carnosus subsp. carnosus TM300 putative monovalent cation/H+ antiporter subunit A YP_002635219.1 2143803 R 396513 CDS YP_002635220.1 224477614 7551067 complement(2146363..2146956) 1 NC_012121.1 (Q9JV76) Tyrosine recombinase xerD,InterPro: Phage integrase; Hypothetical protein; putative phage integrase family protein 2146956 7551067 Sca_2130 Staphylococcus carnosus subsp. carnosus TM300 putative phage integrase family protein YP_002635220.1 2146363 R 396513 CDS YP_002635221.1 224477615 7551068 complement(2147208..2147927) 1 NC_012121.1 local similarity to (P75247) ClpB protein; Hypothetical protein; hypothetical protein 2147927 7551068 Sca_2131 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635221.1 2147208 R 396513 CDS YP_002635222.1 224477616 7551069 2148133..2149341 1 NC_012121.1 slightly similar to:,(O43053) Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-13-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase); Hypothetical protein; hypothetical protein 2149341 7551069 Sca_2132 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635222.1 2148133 D 396513 CDS YP_002635223.1 224477617 7551070 2149345..2150481 1 NC_012121.1 Hypothetical protein; hypothetical protein 2150481 7551070 Sca_2133 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635223.1 2149345 D 396513 CDS YP_002635224.1 224477618 7551071 complement(2150929..2151585) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2151585 7551071 Sca_2134 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635224.1 2150929 R 396513 CDS YP_002635225.1 224477619 7551072 2152258..2153268 1 NC_012121.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase 2153268 fdh 7551072 fdh Staphylococcus carnosus subsp. carnosus TM300 formate dehydrogenase YP_002635225.1 2152258 D 396513 CDS YP_002635226.1 224477620 7551566 complement(2153452..2154237) 1 NC_012121.1 putative hydrolase,(Q8R164) Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase) (Biphenyl hydrolase-like protein),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; hypothetical protein 2154237 7551566 Sca_2136 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635226.1 2153452 R 396513 CDS YP_002635227.1 224477621 7551073 complement(2154367..2155233) 1 NC_012121.1 (Q45581) Putative HTH-type transcriptional regulator ybbH,InterPro: Sugar isomerase (SIS); Hypothetical protein; putative RpiR family transcriptional regulator 2155233 7551073 Sca_2137 Staphylococcus carnosus subsp. carnosus TM300 putative RpiR family transcriptional regulator YP_002635227.1 2154367 R 396513 CDS YP_002635228.1 224477622 7551074 complement(2155237..2156712) 1 NC_012121.1 (Q9KVD9) PTS system sucrose-specific IIBC component (EIIBC-Scr) (Sucrose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Scr),InterPro: Phosphotransferase system EIIC; Conserved hypothetical protein; putative PTS system, IIBC components 2156712 7551074 Sca_2138 Staphylococcus carnosus subsp. carnosus TM300 putative PTS system, IIBC components YP_002635228.1 2155237 R 396513 CDS YP_002635229.1 224477623 7551075 complement(2156725..2157609) 1 NC_012121.1 (Q8ZCP8) Hypothetical protein YPO2925/Y1305/YP2532,InterPro: Glucokinase regulatory-like protein; Hypothetical protein; putative glucokinase regulatory protein 2157609 7551075 Sca_2139 Staphylococcus carnosus subsp. carnosus TM300 putative glucokinase regulatory protein YP_002635229.1 2156725 R 396513 CDS YP_002635230.1 224477624 7551076 complement(2157599..2158663) 1 NC_012121.1 InterPro: Bacterial protein of unknown function DUF871; Hypothetical protein; hypothetical protein 2158663 7551076 Sca_2140 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635230.1 2157599 R 396513 CDS YP_002635231.1 224477625 7551077 complement(2158939..2159292) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2159292 7551077 Sca_2141 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635231.1 2158939 R 396513 CDS YP_002635232.1 224477626 7551078 2159485..2160678 1 NC_012121.1 (Q50228) Formamidase (EC 3.5.1.49) (Formamide amidohydrolase),InterPro: Acetamidase/Formamidase; Hypothetical protein; putative formamidase 2160678 fmdA 7551078 fmdA Staphylococcus carnosus subsp. carnosus TM300 putative formamidase YP_002635232.1 2159485 D 396513 CDS YP_002635233.1 224477627 7551579 complement(2161482..2162189) 1 NC_012121.1 (P32157) Hypothetical protein yiiM,InterPro: MOSC domain; Hypothetical protein; hypothetical protein 2162189 7551579 Sca_2143 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635233.1 2161482 R 396513 CDS YP_002635234.1 224477628 7551079 2162356..2163246 1 NC_012121.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; fructose-1,6-bisphosphate aldolase 2163246 fda 7551079 fda Staphylococcus carnosus subsp. carnosus TM300 fructose-1,6-bisphosphate aldolase YP_002635234.1 2162356 D 396513 CDS YP_002635235.1 224477629 7551565 2163619..2164602 1 NC_012121.1 similar to low temperature requirement A protein; Hypothetical protein; hypothetical protein 2164602 7551565 Sca_2145 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635235.1 2163619 D 396513 CDS YP_002635236.1 224477630 7551080 complement(2164657..2165169) 1 NC_012121.1 (Q9YDD5) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine monophosphate kinase) (CMP kinase); Hypothetical protein; putative DNA topology modulation protein FlaR 2165169 flaR 7551080 flaR Staphylococcus carnosus subsp. carnosus TM300 putative DNA topology modulation protein FlaR YP_002635236.1 2164657 R 396513 CDS YP_002635237.1 224477631 7551578 complement(2165370..2168240) 1 NC_012121.1 (P24125) 51.5 kDa protein,InterPro: DEAD/DEAH box helicase; Hypothetical protein; putative helicase 2168240 7551578 Sca_2147 Staphylococcus carnosus subsp. carnosus TM300 putative helicase YP_002635237.1 2165370 R 396513 CDS YP_002635238.1 224477632 7551081 complement(2168246..2168638) 1 NC_012121.1 (P08337) Mutator mutT protein (78-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (EC 3.6.1.-) (dGTP pyrophosphohydrolase),InterPro: NUDIX hydrolase; Hypothetical protein; putative mutator protein mutT 2168638 7551081 Sca_2148 Staphylococcus carnosus subsp. carnosus TM300 putative mutator protein mutT YP_002635238.1 2168246 R 396513 CDS YP_002635239.1 224477633 7551082 complement(2168823..2169389) 1 NC_012121.1 (O66043) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase) (CL synthase); Hypothetical protein; hypothetical protein 2169389 7551082 Sca_2149 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635239.1 2168823 R 396513 CDS YP_002635240.1 224477634 7551083 complement(2169476..2171644) 1 NC_012121.1 similar to S. epidermidis teichoic acid biosynthesis protein F [Staphylococcus epidermidis ATCC 12228],Blastscore: Expect = 0.0 Identities = 479/720 (66%), Positives = 597/720 (82%),(P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein; putative teichoic acid biosynthesis protein F 2171644 7551083 Sca_2150 Staphylococcus carnosus subsp. carnosus TM300 putative teichoic acid biosynthesis protein F YP_002635240.1 2169476 R 396513 CDS YP_002635241.1 224477635 7551084 complement(2171966..2174596) 1 NC_012121.1 (O06079) Putative membrane protein mmpL11,InterPro: Sterol-sensing 5TM box; Hypothetical protein; putative antibiotic transport-associated protein 2174596 7551084 Sca_2151 Staphylococcus carnosus subsp. carnosus TM300 putative antibiotic transport-associated protein YP_002635241.1 2171966 R 396513 CDS YP_002635242.1 224477636 7551085 2174747..2175322 1 NC_012121.1 (P46330) Putative HTH-type transcriptional regulator yxbF; Hypothetical protein; TetR family transcriptional regulator 2175322 7551085 Sca_2152 Staphylococcus carnosus subsp. carnosus TM300 TetR family transcriptional regulator YP_002635242.1 2174747 D 396513 CDS YP_002635243.1 224477637 7551086 2175492..2177315 1 NC_012121.1 local similarity to:,(Q8PDD7) Phosphoglycerol transferase I (EC 2.7.8.20) (Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase),InterPro: Sulfatase; Hypothetical protein; hypothetical protein 2177315 7551086 Sca_2153 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635243.1 2175492 D 396513 CDS YP_002635244.1 224477638 7551087 complement(2177400..2178947) 1 NC_012121.1 (P37781) Putative O-antigen transporter,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein; hypothetical protein 2178947 7551087 Sca_2154 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635244.1 2177400 R 396513 CDS YP_002635245.1 224477639 7551088 complement(2178963..2180246) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2180246 7551088 Sca_2155 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635245.1 2178963 R 396513 CDS YP_002635246.1 224477640 7551089 complement(2180672..2181937) 1 NC_012121.1 similar to Amylovoran biosynthesis AmsK [Bacillus cereus ATCC 14579] gi|29898862|gb|AAP12133.1|,local similarity to:,(O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2),InterPro: Glycosyl transferase group 1; Hypothetical protein; hypothetical protein 2181937 7551089 Sca_2156 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635246.1 2180672 R 396513 CDS YP_002635247.1 224477641 7551090 complement(2181956..2182546) 1 NC_012121.1 local similarity to:,(P26406) Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) (Galactosyl-P-P-undecaprenol synthetase),InterPro: Bacterial sugar transferase; Hypothetical protein; hypothetical protein 2182546 7551090 Sca_2157 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635247.1 2181956 R 396513 CDS YP_002635248.1 224477642 7551091 complement(2182524..2183435) 1 NC_012121.1 (Q58455) Hypothetical protein MJ1055,InterPro: NAD-dependent epimerase/dehydratase; Hypothetical protein; putative UDP-glucose 4-epimerase 2183435 7551091 Sca_2158 Staphylococcus carnosus subsp. carnosus TM300 putative UDP-glucose 4-epimerase YP_002635248.1 2182524 R 396513 CDS YP_002635249.1 224477643 7551092 complement(2183436..2184545) 1 NC_012121.1 (Q8RG86) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain); Hypothetical protein; hypothetical protein 2184545 7551092 Sca_2159 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635249.1 2183436 R 396513 CDS YP_002635250.1 224477644 7551093 complement(2184542..2185429) 1 NC_012121.1 (Q58466) Hypothetical protein MJ1066,InterPro: DegT/DnrJ/EryC1/StrS aminotransferase; Hypothetical protein; hypothetical protein 2185429 7551093 Sca_2160 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635250.1 2184542 R 396513 CDS YP_002635251.1 224477645 7551094 complement(2185411..2185746) 1 NC_012121.1 (P39623) Spore coat polysaccharide biosynthesis protein spsC; Hypothetical protein; hypothetical protein 2185746 7551094 Sca_2161 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635251.1 2185411 R 396513 CDS YP_002635252.1 224477646 7551095 complement(2186280..2187968) 1 NC_012121.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 2187968 cudB 7551095 cudB Staphylococcus carnosus subsp. carnosus TM300 choline dehydrogenase YP_002635252.1 2186280 R 396513 CDS YP_002635253.1 224477647 7551492 complement(2188134..2189627) 1 NC_012121.1 (P71016) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein; glycine betaine aldehyde dehydrogenase 2189627 cudA 7551492 cudA Staphylococcus carnosus subsp. carnosus TM300 glycine betaine aldehyde dehydrogenase YP_002635253.1 2188134 R 396513 CDS YP_002635254.1 224477648 7551491 2189848..2190393 1 NC_012121.1 (P71015) Hypothetical protein yuaC (ORF2); Conserved hypothetical protein; putative transcriptional regulator of cud operon 2190393 cudC 7551491 cudC Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator of cud operon YP_002635254.1 2189848 D 396513 CDS YP_002635255.1 224477649 7551493 complement(2190492..2192147) 1 NC_012121.1 (P76252) Probable transport protein yeaV,InterPro: BCCT transporter; Conserved hypothetical protein; choline transporter 2192147 cudT 7551493 cudT Staphylococcus carnosus subsp. carnosus TM300 choline transporter YP_002635255.1 2190492 R 396513 CDS YP_002635256.1 224477650 7551494 complement(2192665..2194311) 1 NC_012121.1 (P23234) Indole-3-pyruvate decarboxylase (EC 4.1.1.74) (Indolepyruvate decarboxylase),InterPro: Pyruvate decarboxylase; Conserved hypothetical protein; putative indole-3-pyruvate decarboxylase 2194311 7551494 Sca_2166 Staphylococcus carnosus subsp. carnosus TM300 putative indole-3-pyruvate decarboxylase YP_002635256.1 2192665 R 396513 CDS YP_002635257.1 224477651 7551096 complement(2194507..2194956) 1 NC_012121.1 (P62087) Putative HTH-type transcriptional regulator SA2060,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; putative regulatory protein 2194956 7551096 Sca_2167 Staphylococcus carnosus subsp. carnosus TM300 putative regulatory protein YP_002635257.1 2194507 R 396513 CDS YP_002635258.1 224477652 7551097 complement(2195600..2195866) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2195866 7551097 Sca_2168 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635258.1 2195600 R 396513 CDS YP_002635259.1 224477653 7551098 2195966..2197102 1 NC_012121.1 (P54432) Hypothetical protein yrkE,InterPro: Rhodanese-like; Conserved hypothetical protein; hypothetical protein 2197102 7551098 Sca_2169 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635259.1 2195966 D 396513 CDS YP_002635260.1 224477654 7551099 complement(2197207..2198130) 1 NC_012121.1 (P76049) Hypothetical protein ycjY,InterPro: Esterase/lipase/thioesterase,COG1073: Hydrolases of the alpha/beta superfamily; Conserved hypothetical protein; hypothetical protein 2198130 7551099 Sca_2170 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635260.1 2197207 R 396513 CDS YP_002635261.1 224477655 7551100 2198279..2198839 1 NC_012121.1 weak similarity to transcriptional regulator tetR family; Hypothetical protein; hypothetical protein 2198839 7551100 Sca_2171 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635261.1 2198279 D 396513 CDS YP_002635262.1 224477656 7551101 2199106..2199219 1 NC_012121.1 Hypothetical protein; hypothetical protein 2199219 7551101 Sca_2172 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635262.1 2199106 D 396513 CDS YP_002635263.1 224477657 7551102 complement(2199406..2200566) 1 NC_012121.1 (Q01911) Tetracycline resistance protein from transposon Tn4351/Tn4400,InterPro: Flavoprotein monooxygenase; Hypothetical protein; putative monooxygenase 2200566 7551102 Sca_2173 Staphylococcus carnosus subsp. carnosus TM300 putative monooxygenase YP_002635263.1 2199406 R 396513 CDS YP_002635264.1 224477658 7551103 complement(2200603..2201187) 1 NC_012121.1 (Q46872) Hypothetical protein yqjI,InterPro: Transcriptional regulator PadR-like family; Hypothetical protein; hypothetical protein 2201187 7551103 Sca_2174 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635264.1 2200603 R 396513 CDS YP_002635265.1 224477659 7551104 complement(2201345..2202310) 1 NC_012121.1 (P37829) Fructokinase (EC 2.7.1.4),InterPro: Carbohydrate kinase PfkB; Hypothetical protein; putative fructokinase 2202310 7551104 Sca_2175 Staphylococcus carnosus subsp. carnosus TM300 putative fructokinase YP_002635265.1 2201345 R 396513 CDS YP_002635266.1 224477660 7551105 complement(2202382..2202999) 1 NC_012121.1 similar to transcriptional regulator tetR-family,(P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein; putative transcriptional regulator 2202999 7551105 Sca_2176 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002635266.1 2202382 R 396513 CDS YP_002635267.1 224477661 7551106 2203165..2204451 1 NC_012121.1 putative membrane protein,similar to phage infection protein precursor; Conserved hypothetical protein; hypothetical protein 2204451 7551106 Sca_2177 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635267.1 2203165 D 396513 CDS YP_002635268.1 224477662 7551107 complement(2204558..2207599) 1 NC_012121.1 (P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase,C-terminus similar to poly-alpha-glucosyltransferase; Hypothetical protein; hypothetical protein 2207599 7551107 Sca_2178 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635268.1 2204558 R 396513 CDS YP_002635269.1 224477663 7551108 complement(2207638..2208273) 1 NC_012121.1 (Q05852) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) (General stress protein 33) (GSP33),InterPro: Nucleotidyl transferase; Hypothetical protein; UDP-glucose pyrophosphorylase 2208273 7551108 Sca_2179 Staphylococcus carnosus subsp. carnosus TM300 UDP-glucose pyrophosphorylase YP_002635269.1 2207638 R 396513 CDS YP_002635270.1 224477664 7551109 complement(2208305..2208493) 1 NC_012121.1 (Q05852) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) (General stress protein 33) (GSP33); Hypothetical protein; UTP--glucose-1-phosphate uridylyltransferase 2208493 7551109 Sca_2180 Staphylococcus carnosus subsp. carnosus TM300 UTP--glucose-1-phosphate uridylyltransferase YP_002635270.1 2208305 R 396513 CDS YP_002635271.1 224477665 7551110 2208982..2211483 1 NC_012121.1 similar to teichoic acid biosynthesis protein F,(P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein; hypothetical protein 2211483 7551110 Sca_2181 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635271.1 2208982 D 396513 CDS YP_002635272.1 224477666 7551111 complement(2211543..2212628) 1 NC_012121.1 similar to icaC,(Q9FF17) Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-13-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase),InterPro: Acyltransferase 3 family; Hypothetical protein; hypothetical protein 2212628 7551111 Sca_2182 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635272.1 2211543 R 396513 CDS YP_002635273.1 224477667 7551112 2213268..2214356 1 NC_012121.1 similar to aminoterminal part (aa 1-311) of COG1887: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Pediococcus pentosaceus ATCC 25745] ,InterPro: Glycosyl transferase family 2; Hypothetical protein; hypothetical protein 2214356 7551112 Sca_2183 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635273.1 2213268 D 396513 CDS YP_002635274.1 224477668 7551113 2214365..2216611 1 NC_012121.1 similar to carboxyterminal part (aa 334-1110) of COG1887: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Pediococcus pentosaceus ATCC 25745],InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein; hypothetical protein 2216611 7551113 Sca_2184 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635274.1 2214365 D 396513 CDS YP_002635275.1 224477669 7551114 complement(2217150..2218244) 1 NC_012121.1 similar to icaC,InterPro: Acyltransferase 3 family; Conserved hypothetical protein; hypothetical protein 2218244 7551114 Sca_2185 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635275.1 2217150 R 396513 CDS YP_002635276.1 224477670 7551115 complement(2218521..2219465) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2219465 7551115 Sca_2186 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635276.1 2218521 R 396513 CDS YP_002635277.1 224477671 7551116 complement(2219795..2220538) 1 NC_012121.1 (Q05587) Regulatory protein pocR,InterPro: Helix-turn-helix AraC type; Hypothetical protein; hypothetical protein 2220538 7551116 Sca_2187 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635277.1 2219795 R 396513 CDS YP_002635278.1 224477672 7551117 complement(2221000..2221740) 1 NC_012121.1 (P77538) Hypothetical protein yfhR,InterPro: Esterase/lipase/thioesterase; Hypothetical protein; hypothetical protein 2221740 7551117 Sca_2188 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635278.1 2221000 R 396513 CDS YP_002635279.1 224477673 7552250 complement(2222108..2222953) 1 NC_012121.1 (Q8ZRN1) D-methionine-binding lipoprotein metQ precursor,InterPro: NLPA lipoprotein,similar to lactococcal lipoprotein; Conserved hypothetical protein; hypothetical protein 2222953 7552250 Sca_2189 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635279.1 2222108 R 396513 CDS YP_002635280.1 224477674 7551119 complement(2222977..2223636) 1 NC_012121.1 (Q9KTJ6) Probable D-methionine transport system permease protein metI,InterPro: Binding-protein-dependent transport systems inner membrane component; Conserved hypothetical protein; putative ABC transporter permease 2223636 7551119 Sca_2190 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002635280.1 2222977 R 396513 CDS YP_002635281.1 224477675 7551120 complement(2223638..2224654) 1 NC_012121.1 (Q8X7Z9) D-methionine transport ATP-binding protein metN,InterPro: ABC transporter; Conserved hypothetical protein; putative ABC transporter ATP-binding protein 2224654 7551120 Sca_2191 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002635281.1 2223638 R 396513 CDS YP_002635282.1 224477676 7551121 complement(<2225509..2238240) 1 NC_012121.1 Note: Signal peptide predicted by SignalP 3.0: Most likely cleavage site between pos. 47 and 48: AEA-AE. Signal pepetide reveals SIRK-Motif (aa 20-23).,LPXTG-Motif: aa 4210-4214; Hypothetical protein; putative glycine-rich cell wall surface anchor protein 2238240 7551121 Sca_1292a Staphylococcus carnosus subsp. carnosus TM300 putative glycine-rich cell wall surface anchor protein YP_002635282.1 <2225509 R 396513 CDS YP_002635283.1 224477677 7552245 2238766..2239791 1 NC_012121.1 (P04395) DNA-3-methyladenine glycosylase II (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II inducible) (TAG II) (DNA-3-methyladenine glycosidase II),InterPro: HhH-GPD; Hypothetical protein; hypothetical protein 2239791 7552245 Sca_2193 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635283.1 2238766 D 396513 CDS YP_002635284.1 224477678 7551122 complement(2239846..2241198) 1 NC_012121.1 (P60552) Guanylate kinase (EC 2.7.4.8) (GMP kinase); Conserved hypothetical protein; hypothetical protein 2241198 7551122 Sca_2194 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635284.1 2239846 R 396513 CDS YP_002635285.1 224477679 7551123 complement(2241191..2241841) 1 NC_012121.1 (O05083) Putative glycosyl transferase HI1698 (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein; hypothetical protein 2241841 7551123 Sca_2195 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635285.1 2241191 R 396513 CDS YP_002635286.1 224477680 7551124 complement(2241965..2242714) 1 NC_012121.1 (O89107) Deoxyribonuclease gamma precursor (EC 3.1.21.-) (DNase gamma) (Deoxyribonuclease I-like 3) (DNaseY); Hypothetical protein; hypothetical protein 2242714 7551124 Sca_2196 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635286.1 2241965 R 396513 CDS YP_002635287.1 224477681 7551125 complement(2242731..2245121) 1 NC_012121.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 2245121 7551125 Sca_2197 Staphylococcus carnosus subsp. carnosus TM300 preprotein translocase subunit SecA YP_002635287.1 2242731 R 396513 CDS YP_002635288.1 224477682 7551126 complement(2245123..2245620) 1 NC_012121.1 (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit); Hypothetical protein; hypothetical protein 2245620 7551126 Sca_2198 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635288.1 2245123 R 396513 CDS YP_002635289.1 224477683 7551127 complement(2245626..2247158) 1 NC_012121.1 (P78527) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1) (DNA-PKcs) (DNPK1) (p460); Hypothetical protein; hypothetical protein 2247158 7551127 Sca_2199 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635289.1 2245626 R 396513 CDS YP_002635290.1 224477684 7551128 complement(2247148..2248698) 1 NC_012121.1 (Q9ULL1) Pleckstrin homology domain containing family G member 1 (Fragment); Conserved hypothetical protein; hypothetical protein 2248698 7551128 Sca_2200 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635290.1 2247148 R 396513 CDS YP_002635291.1 224477685 7551129 complement(2248813..2249925) 1 NC_012121.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 2249925 secY 7551129 secY Staphylococcus carnosus subsp. carnosus TM300 preprotein translocase subunit SecY YP_002635291.1 2248813 R 396513 CDS YP_002635292.1 224477686 7551130 complement(2250006..2256845) 1 NC_012121.1 Similar to C-terminal part (aa 1303-3607) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03635): 3608 aa,Note: LPXTG-Motif (aa 2238-2242); Hypothetical protein; hypothetical protein 2256845 7551130 Sca_2202 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635292.1 2250006 R 396513 CDS YP_002635293.1 224477687 7551131 complement(2256842..>2260339) 1 NC_012121.1 Similar to internal part (aa 229-1302) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03635); Hypothetical protein; hypothetical protein >2260339 7551131 Sca_2202a Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635293.1 2256842 R 396513 CDS YP_002635294.1 224477688 7551132 complement(2260340..2261068) 1 NC_012121.1 (P27470) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I) (Dextransucrase) (Sucrose 6-glucosyltransferase),Similar to N-terminal part (aa 1-227) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03635): 3608 aa; Hypothetical protein; hypothetical protein 2261068 7551132 Sca_2207 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635294.1 2260340 R 396513 CDS YP_002635295.1 224477689 7551133 complement(2261375..2262682) 1 NC_012121.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 2262682 7551133 Sca_2208 Staphylococcus carnosus subsp. carnosus TM300 anaerobic C4-dicarboxylate transporter YP_002635295.1 2261375 R 396513 CDS YP_002635296.1 224477690 7551134 2263020..2263217 1 NC_012121.1 Hypothetical protein; hypothetical protein 2263217 7551134 Sca_2209 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635296.1 2263020 D 396513 CDS YP_002635297.1 224477691 7551135 complement(2263384..2265396) 1 NC_012121.1 (P42234) Catalase 2 (EC 1.11.1.6),InterPro: Catalase; Conserved hypothetical protein; putative catalase 2265396 katE/B 7551135 katE/B Staphylococcus carnosus subsp. carnosus TM300 putative catalase YP_002635297.1 2263384 R 396513 CDS YP_002635298.1 224477692 7551726 complement(2265625..2266413) 1 NC_012121.1 (P42966) Hypothetical UPF0317 protein ycsI; Hypothetical protein; hypothetical protein 2266413 7551726 Sca_2211 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635298.1 2265625 R 396513 CDS YP_002635299.1 224477693 7551136 2267595..>2267816 1 NC_012121.1 Hypothetical protein; putative sec-independent protein translocase >2267816 tatA 7551136 tatA Staphylococcus carnosus subsp. carnosus TM300 putative sec-independent protein translocase YP_002635299.1 2267595 D 396513 CDS YP_002635300.1 224477694 7552167 2267881..2268594 1 NC_012121.1 similar to Sec-independent protein translocase protein tatC, Escherichia coli, 258AA, Expect = 2e-25,Identities = 75/228 (32%), Positives = 121/228 (53%),Gaps = 6/228 (2%),(O05523) Hypothetical protein ydiJ,InterPro: Sec-independent periplasmic protein translocase; High confidence in function and specificity; putative sec-independent protein translocase 2268594 tatC 7552167 tatC Staphylococcus carnosus subsp. carnosus TM300 putative sec-independent protein translocase YP_002635300.1 2267881 D 396513 CDS YP_002635301.1 224477695 7552168 complement(2268646..2270373) 1 NC_012121.1 (P39595) Hypothetical protein ywbL precursor,putative membrane protein; Hypothetical protein; hypothetical protein 2270373 7552168 Sca_2213 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635301.1 2268646 R 396513 CDS YP_002635302.1 224477696 7551137 complement(2270354..2271577) 1 NC_012121.1 (P39597) Hypothetical protein ywbN precursor,InterPro: Tat-translocated enzyme; Hypothetical protein; putative Tat-translocated protein 2271577 7551137 Sca_2214 Staphylococcus carnosus subsp. carnosus TM300 putative Tat-translocated protein YP_002635302.1 2270354 R 396513 CDS YP_002635303.1 224477697 7551138 complement(2271574..2272428) 1 NC_012121.1 (P75902) Protein ycdO,InterPro: Protein of unknown function DUF451,putative lipoprotein; Hypothetical protein; hypothetical protein 2272428 7551138 Sca_2215 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635303.1 2271574 R 396513 CDS YP_002635304.1 224477698 7551139 complement(2272821..2274275) 1 NC_012121.1 similar to multidrug resistance protein,(P54585) Hypothetical transport protein yhcA,InterPro: General substrate transporter; Hypothetical protein; hypothetical protein 2274275 7551139 Sca_2216 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635304.1 2272821 R 396513 CDS YP_002635305.1 224477699 7551140 complement(2274458..2276071) 1 NC_012121.1 (Q58746) Hypothetical protein MJ1351,InterPro: Ferredoxin-dependent glutamate synthase; Hypothetical protein; putative glutamate synthase (ferredoxin) 2276071 7551140 Sca_2217 Staphylococcus carnosus subsp. carnosus TM300 putative glutamate synthase (ferredoxin) YP_002635305.1 2274458 R 396513 CDS YP_002635306.1 224477700 7551141 2276482..2277186 1 NC_012121.1 (P25145) Hypothetical oxidoreductase Lmo0432 (EC 1.-.-.-) (ORFA),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative short chain dehydrogenase 2277186 7551141 Sca_2218 Staphylococcus carnosus subsp. carnosus TM300 putative short chain dehydrogenase YP_002635306.1 2276482 D 396513 CDS YP_002635307.1 224477701 7551142 complement(2277314..2277499) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2277499 7551142 Sca_2219 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635307.1 2277314 R 396513 CDS YP_002635308.1 224477702 7551143 2277641..2278780 1 NC_012121.1 Hypothetical protein; hypothetical protein 2278780 7551143 Sca_2220 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635308.1 2277641 D 396513 CDS YP_002635309.1 224477703 7551144 complement(2278838..2279383) 1 NC_012121.1 (P49687) Nucleoporin NUP145 (Nuclear pore protein NUP145); Hypothetical protein; hypothetical protein 2279383 7551144 Sca_2221 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635309.1 2278838 R 396513 CDS YP_002635310.1 224477704 7551145 complement(2279571..2280566) 1 NC_012121.1 (P50494) Duffy receptor gamma form precursor (Erythrocyte binding protein); Hypothetical protein; hypothetical protein 2280566 7551145 Sca_2222 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635310.1 2279571 R 396513 CDS YP_002635311.1 224477705 7551146 complement(2280742..2282085) 1 NC_012121.1 (O66557) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) (78-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase),InterPro: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; Hypothetical protein; putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2282085 bioA 7551146 bioA Staphylococcus carnosus subsp. carnosus TM300 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002635311.1 2280742 R 396513 CDS YP_002635312.1 224477706 7551442 complement(2282093..2282767) 1 NC_012121.1 (Q8CQD8) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin synthase) (DTB synthetase) (DTBS),InterPro: Cobyrinic acid ac-diamide synthase; Hypothetical protein; putative dethiobiotin synthetase 2282767 bioD 7551442 bioD Staphylococcus carnosus subsp. carnosus TM300 putative dethiobiotin synthetase YP_002635312.1 2282093 R 396513 CDS YP_002635313.1 224477707 7551444 complement(2282748..2283311) 1 NC_012121.1 (P22819) Protein bioY,InterPro: BioY protein; Hypothetical protein; putative biotin synthase 2283311 bioY 7551444 bioY Staphylococcus carnosus subsp. carnosus TM300 putative biotin synthase YP_002635313.1 2282748 R 396513 CDS YP_002635314.1 224477708 7551445 2283570..2284598 1 NC_012121.1 (Q8TDX5) 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45),InterPro: Amidohydrolase 2; Hypothetical protein; hypothetical protein 2284598 7551445 Sca_2226 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635314.1 2283570 D 396513 CDS YP_002635315.1 224477709 7551147 complement(2284820..2285500) 1 NC_012121.1 (P25052) Transcriptional activator tenA,InterPro: TENA/THI-4 protein; Hypothetical protein; putative transcriptional activator TenA 2285500 7551147 Sca_2227 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional activator TenA YP_002635315.1 2284820 R 396513 CDS YP_002635316.1 224477710 7551148 complement(2285530..2286384) 1 NC_012121.1 (Q9CBY2) Trigger factor (TF),InterPro: Patatin; Hypothetical protein; hypothetical protein 2286384 7551148 Sca_2228 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635316.1 2285530 R 396513 CDS YP_002635317.1 224477711 7551149 complement(2286419..2286922) 1 NC_012121.1 (P30536) Peripheral-type benzodiazepine receptor (PBR) (PKBS) (Mitochondrial benzodiazepine receptor),InterPro: TspO/MBR-related protein; Hypothetical protein; hypothetical protein 2286922 7551149 Sca_2229 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635317.1 2286419 R 396513 CDS YP_002635318.1 224477712 7551150 2287748..2288020 1 NC_012121.1 Truncated ORF,Only local alignments to,(P50186) NaeI very-short-patch-repair endonuclease (EC 3.1.-.-) (V.NaeI),InterPro: DNA mismatch endonuclease vsr; Hypothetical protein; hypothetical protein 2288020 7551150 Sca_2230 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635318.1 2287748 D 396513 CDS YP_002635319.1 224477713 7551151 complement(2288115..2289737) 1 NC_012121.1 (Q9L9D7) Cocaine esterase (EC 3.1.1.-),InterPro: Peptidase S15; Hypothetical protein; hypothetical protein 2289737 7551151 Sca_2231 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635319.1 2288115 R 396513 CDS YP_002635320.1 224477714 7551152 2289906..2290484 1 NC_012121.1 (P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein; putative DNA-binding protein 2290484 7551152 Sca_2232 Staphylococcus carnosus subsp. carnosus TM300 putative DNA-binding protein YP_002635320.1 2289906 D 396513 CDS YP_002635321.1 224477715 7551153 complement(2290557..2291258) 1 NC_012121.1 (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative short chain dehydrogenase 2291258 7551153 Sca_2233 Staphylococcus carnosus subsp. carnosus TM300 putative short chain dehydrogenase YP_002635321.1 2290557 R 396513 CDS YP_002635322.1 224477716 7551154 complement(2291271..2291813) 1 NC_012121.1 (Q59431) HTH-type transcriptional regulator uidR (Uid operon repressor) (Gus operon repressor),InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein; TetR family transcriptional regulator 2291813 7551154 Sca_2234 Staphylococcus carnosus subsp. carnosus TM300 TetR family transcriptional regulator YP_002635322.1 2291271 R 396513 CDS YP_002635323.1 224477717 7551155 complement(2291835..2292653) 1 NC_012121.1 (O78472) Hypothetical 35.9 kDa protein ycf39; Hypothetical protein; hypothetical protein 2292653 7551155 Sca_2235 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635323.1 2291835 R 396513 CDS YP_002635324.1 224477718 7551156 2292901..2293659 1 NC_012121.1 (Q8K3Z0) Caspase recruitment domain protein 15 (Nod2 protein),InterPro: Abortive infection protein; Hypothetical protein; hypothetical protein 2293659 7551156 Sca_2236 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635324.1 2292901 D 396513 CDS YP_002635325.1 224477719 7551157 complement(2294722..2294820) 1 NC_012121.1 Similar to C-terminal part(aa 223-308) of putative glycine betaine/carnitine/choline-binding lipoprotein precursor [Staphylococcus aureus subsp. aureus MRSA252] (YP_041887): 313 aa,(O32243) Glycine betaine/carnitine/choline-binding protein precursor (Osmoprotectant-binding protein); Hypothetical protein; hypothetical protein 2294820 7551157 Sca_2237 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635325.1 2294722 R 396513 CDS YP_002635326.1 224477720 7551158 complement(2294981..2295652) 1 NC_012121.1 Similar to N-terminal part (aa 1-219) of putative glycine betaine/carnitine/choline-binding lipoprotein precursor [Staphylococcus aureus subsp. aureus MRSA252] (YP_041887): 313 aa,(O32243) Glycine betaine/carnitine/choline-binding protein precursor (Osmoprotectant-binding protein),InterPro: Substrate-binding region of ABC-type glycine betaine transport system; Hypothetical protein; hypothetical protein 2295652 7551158 Sca_2238 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635326.1 2294981 R 396513 CDS YP_002635327.1 224477721 7551159 complement(2295775..2296422) 1 NC_012121.1 similar to,(O52655) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein; putative serine/threonine protein phosphatase 2296422 7551159 Sca_2239 Staphylococcus carnosus subsp. carnosus TM300 putative serine/threonine protein phosphatase YP_002635327.1 2295775 R 396513 CDS YP_002635328.1 224477722 7551160 complement(2296427..2298142) 1 NC_012121.1 (Q57341) Putative ferric transport system permease protein fbpB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein; putative ABC transporter permease 2298142 7551160 Sca_2240 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter permease YP_002635328.1 2296427 R 396513 CDS YP_002635329.1 224477723 7551161 complement(2298321..2299355) 1 NC_012121.1 (P43951) Protein HI0131 precursor,InterPro: Bacterial extracellular solute-binding protein family 1; Hypothetical protein; putative ABC transporter substrate-binding protein 2299355 7551161 Sca_2241 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter substrate-binding protein YP_002635329.1 2298321 R 396513 CDS YP_002635330.1 224477724 7551162 complement(2299356..2300579) 1 NC_012121.1 (Q8XZP8) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase),InterPro: ABC transporter; Hypothetical protein; putative ABC transporter ATP-binding protein 2300579 7551162 Sca_2242 Staphylococcus carnosus subsp. carnosus TM300 putative ABC transporter ATP-binding protein YP_002635330.1 2299356 R 396513 CDS YP_002635331.1 224477725 7551163 2300730..2301599 1 NC_012121.1 (P39647) Putative HTH-type transcriptional regulator ywfK,InterPro: LysR substrate binding domain; Hypothetical protein; LysR family transcriptional regulator 2301599 7551163 Sca_2243 Staphylococcus carnosus subsp. carnosus TM300 LysR family transcriptional regulator YP_002635331.1 2300730 D 396513 CDS YP_002635332.1 224477726 7551164 complement(2301783..2302547) 1 NC_012121.1 (Q02821) Importin alpha subunit (Karyopherin alpha subunit) (Serine-rich RNA polymerase I suppressor protein); Hypothetical protein; hypothetical protein 2302547 7551164 Sca_2244 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635332.1 2301783 R 396513 CDS YP_002635333.1 224477727 7551165 2302754..2303149 1 NC_012121.1 Hypothetical protein; hypothetical protein 2303149 7551165 Sca_2245 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635333.1 2302754 D 396513 CDS YP_002635334.1 224477728 7551166 2303158..2303328 1 NC_012121.1 Hypothetical protein; hypothetical protein 2303328 7551166 Sca_2246 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635334.1 2303158 D 396513 CDS YP_002635335.1 224477729 7551167 complement(2303501..2303656) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2303656 7551167 Sca_2247 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635335.1 2303501 R 396513 CDS YP_002635336.1 224477730 7551168 2304722..2305585 1 NC_012121.1 (Q8CMK8) Membrane protein oxaA 2 precursor,InterPro: 60 kDa inner membrane protein; Hypothetical protein; putative lipoprotein 2305585 7551168 Sca_2248 Staphylococcus carnosus subsp. carnosus TM300 putative lipoprotein YP_002635336.1 2304722 D 396513 CDS YP_002635337.1 224477731 7551169 complement(2305639..2306400) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2306400 7551169 Sca_2249 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635337.1 2305639 R 396513 CDS YP_002635338.1 224477732 7551170 complement(2306451..2307512) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2307512 7551170 Sca_2250 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635338.1 2306451 R 396513 CDS YP_002635339.1 224477733 7551171 2307980..2308984 1 NC_012121.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 2308984 argF 7551171 argF Staphylococcus carnosus subsp. carnosus TM300 ornithine carbamoyltransferase YP_002635339.1 2307980 D 396513 CDS YP_002635340.1 224477734 7551411 2309000..2309932 1 NC_012121.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2309932 arcC 7551411 arcC Staphylococcus carnosus subsp. carnosus TM300 carbamate kinase YP_002635340.1 2309000 D 396513 CDS YP_002635341.1 224477735 7551406 2310511..2312106 1 NC_012121.1 (P44023) Hypothetical protein HI0594,InterPro: C4-dicarboxylate anaerobic carrier; Hypothetical protein; hypothetical protein 2312106 7551406 Sca_2253 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635341.1 2310511 D 396513 CDS YP_002635342.1 224477736 7551172 2313759..2314637 1 NC_012121.1 similar to general stress protein,(P80238) General stress protein 26 (GSP26); Hypothetical protein; hypothetical protein 2314637 7551172 Sca_2254 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635342.1 2313759 D 396513 CDS YP_002635343.1 224477737 7551173 complement(2314746..2316311) 1 NC_012121.1 (P44023) Hypothetical protein HI0594,InterPro: C4-dicarboxylate anaerobic carrier,similar to putative membrane arginine transporter; Hypothetical protein; hypothetical protein 2316311 7551173 Sca_2255 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635343.1 2314746 R 396513 CDS YP_002635344.1 224477738 7551174 complement(2316416..2317348) 1 NC_012121.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 2317348 arcC 7551174 arcC Staphylococcus carnosus subsp. carnosus TM300 carbamate kinase YP_002635344.1 2316416 R 396513 CDS YP_002635345.1 224477739 7551407 complement(2317385..2318386) 1 NC_012121.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 2318386 argF 7551407 argF Staphylococcus carnosus subsp. carnosus TM300 ornithine carbamoyltransferase YP_002635345.1 2317385 R 396513 CDS YP_002635346.1 224477740 7551412 2318707..2320200 1 NC_012121.1 Hypothetical protein; Na+/H+ antiporter NhaC 2320200 nhaC 7551412 nhaC Staphylococcus carnosus subsp. carnosus TM300 Na+/H+ antiporter NhaC YP_002635346.1 2318707 D 396513 CDS YP_002635347.1 224477741 7551852 2320571..2322160 1 NC_012121.1 (P39062) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme) (Acetyl-CoA synthase),InterPro: AMP-dependent synthetase and ligase; Hypothetical protein; acetate-CoA ligase 2322160 acsA 7551852 acsA Staphylococcus carnosus subsp. carnosus TM300 acetate-CoA ligase YP_002635347.1 2320571 D 396513 CDS YP_002635348.1 224477742 7551366 complement(2322338..2323885) 1 NC_012121.1 Similar to osmoregulated proline transporter opuE,Bacillus subtilis,,492AA, Expect = 1e-141, Identities = 272/478 (56%), Positives = 366/478 (76%), Gaps = 14/478 (2%),and to Sodium/proline symporter putP, Escherichia coli,502AA,,Expect = 1e-108, Identities = 224/481 (46%),Positives = 324/481 (67%), Gaps = 17/481 (3%), (O06493) Osmoregulated proline transporter (Sodium/proline symporter),InterPro: Na+/solute symporter; Hypothetical protein; high affinity proline permease 2323885 putP 7551366 putP Staphylococcus carnosus subsp. carnosus TM300 high affinity proline permease YP_002635348.1 2322338 R 396513 CDS YP_002635349.1 224477743 7551986 complement(2324603..2325361) 1 NC_012121.1 (P57140) Hypothetical protein BU028/BU029; Hypothetical protein; hypothetical protein 2325361 7551986 Sca_2261 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635349.1 2324603 R 396513 CDS YP_002635350.1 224477744 7551175 complement(2325641..2326465) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2326465 7551175 Sca_2262 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635350.1 2325641 R 396513 CDS YP_002635351.1 224477745 7551176 complement(2326830..2327783) 1 NC_012121.1 (P37112) N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) (L-aminoacylase),InterPro: Peptidase M20/M25/M40,Similar to C-terminal part (aa 77-383) of N-acyl-L-amino acid amidohydrolase [Deinococcus radiodurans R1] (AAF11266): 388 aa; Hypothetical protein; hypothetical protein 2327783 7551176 Sca_2263 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635351.1 2326830 R 396513 CDS YP_002635352.1 224477746 7551177 complement(2327768..2327983) 1 NC_012121.1 (P54955) Hypothetical protein yxeP,Similar to N-terminal part (aa 10-69) of N-acyl-L-amino acid amidohydrolase [Deinococcus radiodurans R1] (AAF11266): 388 aa; Hypothetical protein; hypothetical protein 2327983 7551177 Sca_2264 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635352.1 2327768 R 396513 CDS YP_002635353.1 224477747 7551178 complement(2328065..2329585) 1 NC_012121.1 (P46133) Aminobenzoyl-glutamate transport protein,InterPro: AbgT putative transporter family; Conserved hypothetical protein; putative aminobenzoyl-glutamate transport protein 2329585 7551178 Sca_2265 Staphylococcus carnosus subsp. carnosus TM300 putative aminobenzoyl-glutamate transport protein YP_002635353.1 2328065 R 396513 CDS YP_002635354.1 224477748 7551179 complement(2329898..2331385) 1 NC_012121.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 2331385 mqo2 7551179 mqo2 Staphylococcus carnosus subsp. carnosus TM300 malate:quinone oxidoreductase YP_002635354.1 2329898 R 396513 CDS YP_002635355.1 224477749 7551806 2331673..2332536 1 NC_012121.1 (Q9CE03) Hypothetical UPF0177 protein yvdC,InterPro: Abortive infection protein; Hypothetical protein; hypothetical protein 2332536 7551806 Sca_2267 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635355.1 2331673 D 396513 CDS YP_002635356.1 224477750 7551180 complement(2332619..2333482) 1 NC_012121.1 (O05730) Probable short-chain type dehydrogenase/reductase vdlC (EC 1.-.-.-),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; hypothetical protein 2333482 7551180 Sca_2268 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635356.1 2332619 R 396513 CDS YP_002635357.1 224477751 7551181 complement(2333529..2334542) 1 NC_012121.1 similar to transcriptional regulator,similar to (Q56069) Multiple antibiotic resistance protein marR,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; hypothetical protein 2334542 7551181 Sca_2269 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635357.1 2333529 R 396513 CDS YP_002635358.1 224477752 7551182 complement(2335026..2335496) 1 NC_012121.1 similar to (Q56069) Multiple antibiotic resistance protein marR,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; hypothetical protein 2335496 7551182 Sca_2270 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635358.1 2335026 R 396513 CDS YP_002635359.1 224477753 7551183 complement(2335585..2337018) 1 NC_012121.1 similar to parts of (P32399) Hypothetical protein yhgE (ORFB); Hypothetical protein; hypothetical protein 2337018 7551183 Sca_2271 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635359.1 2335585 R 396513 CDS YP_002635360.1 224477754 7551184 complement(2337536..2338726) 1 NC_012121.1 (Q9Z9P2) Glycerate kinase (EC 2.7.1.31),InterPro: Conserved hypothetical protein 45; Conserved hypothetical protein; Glycerate kinase 2338726 7551184 Sca_2272 Staphylococcus carnosus subsp. carnosus TM300 Glycerate kinase YP_002635360.1 2337536 R 396513 CDS YP_002635361.1 224477755 7551185 2338866..2339291 1 NC_012121.1 similar to general stress protein,(P80238) General stress protein 26 (GSP26); Hypothetical protein; hypothetical protein 2339291 7551185 Sca_2273 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635361.1 2338866 D 396513 CDS YP_002635362.1 224477756 7551186 complement(2339372..2340235) 1 NC_012121.1 (P37271) Phytoene synthase chloroplast precursor (EC 2.5.1.-),InterPro: Squalene/phytoene synthase; Conserved hypothetical protein; squalene synthase-like protein 2340235 7551186 Sca_2274 Staphylococcus carnosus subsp. carnosus TM300 squalene synthase-like protein YP_002635362.1 2339372 R 396513 CDS YP_002635363.1 224477757 7551187 complement(2340530..2341864) 1 NC_012121.1 similar to putative transporter,(P55908) Hypothetical protein ycgA,InterPro: C4-dicarboxylate anaerobic carrier; Hypothetical protein; hypothetical protein 2341864 7551187 Sca_2275 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635363.1 2340530 R 396513 CDS YP_002635364.1 224477758 7551188 complement(2342086..2342337) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2342337 7551188 Sca_2276 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635364.1 2342086 R 396513 CDS YP_002635365.1 224477759 7551189 2342684..2343790 1 NC_012121.1 similar to putative permease; Hypothetical protein; hypothetical protein 2343790 7551189 Sca_2277 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635365.1 2342684 D 396513 CDS YP_002635366.1 224477760 7551190 complement(2344275..2344472) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2344472 7551190 Sca_2278 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635366.1 2344275 R 396513 CDS YP_002635367.1 224477761 7551191 2344825..2345526 1 NC_012121.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2345526 fabG 7551191 fabG Staphylococcus carnosus subsp. carnosus TM300 3-ketoacyl-ACP reductase YP_002635367.1 2344825 D 396513 CDS YP_002635368.1 224477762 7551554 2345690..2346994 1 NC_012121.1 (P54950) Putative monooxygenase yxeK; Hypothetical protein; putative nitrilotriacetate monooxygenase 2346994 7551554 Sca_2280 Staphylococcus carnosus subsp. carnosus TM300 putative nitrilotriacetate monooxygenase YP_002635368.1 2345690 D 396513 CDS YP_002635369.1 224477763 7551192 complement(2347508..2348152) 1 NC_012121.1 (O66932) Glycogen phosphorylase (EC 2.4.1.1); Hypothetical protein; hypothetical protein 2348152 7551192 Sca_2281 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635369.1 2347508 R 396513 CDS YP_002635370.1 224477764 7551193 complement(2348305..2349042) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2349042 7551193 Sca_2282 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635370.1 2348305 R 396513 CDS YP_002635371.1 224477765 7551194 complement(2349208..2351862) 1 NC_012121.1 (Q02510) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),InterPro: Surface protein from Gram-positive cocci anchor region,truncated putative clumping factor B; Hypothetical protein; hypothetical protein 2351862 7551194 Sca_2283 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635371.1 2349208 R 396513 CDS YP_002635372.1 224477766 7551195 complement(2352156..2354183) 1 NC_012121.1 parts of the gene are similar to ,(Q92H60) Probable UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme),and:,InterPro: Cytoplasmic peptidoglycan synthetases N-terminal; Hypothetical protein; hypothetical protein 2354183 7551195 Sca_2284 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635372.1 2352156 R 396513 CDS YP_002635373.1 224477767 7551196 2354247..2354435 1 NC_012121.1 Hypothetical protein; hypothetical protein 2354435 7551196 Sca_2285 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635373.1 2354247 D 396513 CDS YP_002635374.1 224477768 7551197 complement(2354532..2355008) 1 NC_012121.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase A 2355008 7551197 Sca_2286 Staphylococcus carnosus subsp. carnosus TM300 methionine sulfoxide reductase A YP_002635374.1 2354532 R 396513 CDS YP_002635375.1 224477769 7551198 2355324..2356067 1 NC_012121.1 (Q9X248) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative short-chain dehydrogenase 2356067 7551198 Sca_2287 Staphylococcus carnosus subsp. carnosus TM300 putative short-chain dehydrogenase YP_002635375.1 2355324 D 396513 CDS YP_002635376.1 224477770 7551199 complement(2356126..2356599) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2356599 7551199 Sca_2288 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635376.1 2356126 R 396513 CDS YP_002635377.1 224477771 7551200 complement(2356806..2357888) 1 NC_012121.1 (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-),InterPro: Aldo/keto reductase; Hypothetical protein; putative oxidoreductase protein 2357888 mocA 7551200 mocA Staphylococcus carnosus subsp. carnosus TM300 putative oxidoreductase protein YP_002635377.1 2356806 R 396513 CDS YP_002635378.1 224477772 7551799 2358104..2359291 1 NC_012121.1 truncated putative endonuclease/exonuclease/phosphatase; Hypothetical protein; hypothetical protein 2359291 7551799 Sca_2290 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635378.1 2358104 D 396513 CDS YP_002635379.1 224477773 7551201 2359288..2359974 1 NC_012121.1 truncated putative extracellular nuclease; Hypothetical protein; hypothetical protein 2359974 7551201 Sca_2291 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635379.1 2359288 D 396513 CDS YP_002635380.1 224477774 7551202 2360192..2360326 1 NC_012121.1 Hypothetical protein; hypothetical protein 2360326 7551202 Sca_2292 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635380.1 2360192 D 396513 CDS YP_002635381.1 224477775 7551203 2360516..2361700 1 NC_012121.1 similar to putative transport proteins / permeases; Hypothetical protein; hypothetical protein 2361700 7551203 Sca_2293 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635381.1 2360516 D 396513 CDS YP_002635382.1 224477776 7551204 2361755..2361976 1 NC_012121.1 Hypothetical protein; hypothetical protein 2361976 7551204 Sca_2294 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635382.1 2361755 D 396513 CDS YP_002635383.1 224477777 7551205 complement(2362055..2362657) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2362657 7551205 Sca_2295 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635383.1 2362055 R 396513 CDS YP_002635384.1 224477778 7551206 complement(2362783..2362971) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2362971 7551206 Sca_2296 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635384.1 2362783 R 396513 CDS YP_002635385.1 224477779 7551207 complement(2363020..2363211) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2363211 7551207 Sca_2297 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635385.1 2363020 R 396513 CDS YP_002635386.1 224477780 7551208 2363592..2364509 1 NC_012121.1 (Q9WXE6) Chlorohydroquinone/hydroquinone 12-dioxygenase (EC 1.13.11.-) (Hydroquinone meta-cleavage dioxygenase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Conserved hypothetical protein; putative dioxygenase 2364509 7551208 Sca_2298 Staphylococcus carnosus subsp. carnosus TM300 putative dioxygenase YP_002635386.1 2363592 D 396513 CDS YP_002635387.1 224477781 7551209 complement(2364586..2364861) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2364861 7551209 Sca_2299 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635387.1 2364586 R 396513 CDS YP_002635388.1 224477782 7551210 complement(2364937..2365665) 1 NC_012121.1 InterPro: Excinuclease ABC C subunit N-terminal; Hypothetical protein; hypothetical protein 2365665 7551210 Sca_2300 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635388.1 2364937 R 396513 CDS YP_002635389.1 224477783 7551211 2365990..2366520 1 NC_012121.1 Hypothetical protein; hypothetical protein 2366520 7551211 Sca_2301 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635389.1 2365990 D 396513 CDS YP_002635390.1 224477784 7551212 2366644..2367579 1 NC_012121.1 similar to Tellurite resistance protein; Hypothetical protein; hypothetical protein 2367579 7551212 Sca_2302 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635390.1 2366644 D 396513 CDS YP_002635391.1 224477785 7551213 2367785..2368738 1 NC_012121.1 Hypothetical protein; hypothetical protein 2368738 7551213 Sca_2303 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635391.1 2367785 D 396513 CDS YP_002635392.1 224477786 7551214 complement(2368926..2369561) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2369561 7551214 Sca_2304 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635392.1 2368926 R 396513 CDS YP_002635393.1 224477787 7551215 complement(2369683..2370336) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2370336 7551215 Sca_2305 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635393.1 2369683 R 396513 CDS YP_002635394.1 224477788 7551216 complement(2370329..2371030) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2371030 7551216 Sca_2306 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635394.1 2370329 R 396513 CDS YP_002635395.1 224477789 7551217 complement(2371030..2372562) 1 NC_012121.1 (Q89A21) ATP-dependent DNA helicase rep (EC 3.6.1.-); Hypothetical protein; Superfamily I DNA and RNA helicases 2372562 7551217 Sca_2307 Staphylococcus carnosus subsp. carnosus TM300 Superfamily I DNA and RNA helicases YP_002635395.1 2371030 R 396513 CDS YP_002635396.1 224477790 7551218 2372708..2373412 1 NC_012121.1 Hypothetical protein; hypothetical protein 2373412 7551218 Sca_2308 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635396.1 2372708 D 396513 CDS YP_002635397.1 224477791 7551219 complement(2373545..2374999) 1 NC_012121.1 (P15078) Carbon starvation protein A,InterPro: Carbon starvation protein CstA; Conserved hypothetical protein; carbon starvation protein A-like protein 2374999 7551219 Sca_2309 Staphylococcus carnosus subsp. carnosus TM300 carbon starvation protein A-like protein YP_002635397.1 2373545 R 396513 CDS YP_002635398.1 224477792 7551220 complement(2376022..2377608) 1 NC_012121.1 (P54417) Glycine betaine transporter, opuD like protein,InterPro: BCCT transporter; Conserved hypothetical protein; opuD-like protein, glycine betaine transporter 2377608 opuD 7551220 opuD Staphylococcus carnosus subsp. carnosus TM300 opuD-like protein, glycine betaine transporter YP_002635398.1 2376022 R 396513 CDS YP_002635399.1 224477793 7551895 complement(2377868..2379505) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2379505 7551895 Sca_2311 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635399.1 2377868 R 396513 CDS YP_002635400.1 224477794 7551221 complement(2379576..2381012) 1 NC_012121.1 truncated (Q53585) Enterotoxin type H precursor (SEH); Hypothetical protein; hypothetical protein 2381012 7551221 Sca_2312 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635400.1 2379576 R 396513 CDS YP_002635401.1 224477795 7551222 complement(2381446..2382402) 1 NC_012121.1 (Q9F1W4) Heat-inducible transcription repressor hrcA; Hypothetical protein; hypothetical protein 2382402 7551222 Sca_2313 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635401.1 2381446 R 396513 CDS YP_002635402.1 224477796 7551223 2382625..2382990 1 NC_012121.1 (P47082) Hypothetical 65.3 kDa protein in PRE3-MPP10 intergenic region; Hypothetical protein; hypothetical protein 2382990 7551223 Sca_2314 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635402.1 2382625 D 396513 CDS YP_002635403.1 224477797 7551224 complement(2383048..2384013) 1 NC_012121.1 (P40983) Hypothetical protein in xynA 3region (ORF6) (Fragment); Hypothetical protein; hypothetical protein 2384013 7551224 Sca_2315 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635403.1 2383048 R 396513 CDS YP_002635404.1 224477798 7551225 2384386..2385315 1 NC_012121.1 (Q58111) Hypothetical UPF0003 protein MJ0700,InterPro: Mechanosensitive (MS) ion channel; Hypothetical protein; hypothetical protein 2385315 7551225 Sca_2316 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635404.1 2384386 D 396513 CDS YP_002635405.1 224477799 7551226 2385782..2386576 1 NC_012121.1 Converts D-sorbitol-dphosphate to D-fructose-6-phosphate; sorbitol-6-phosphate 2-dehydrogenase 2386576 srlD 7551226 srlD Staphylococcus carnosus subsp. carnosus TM300 sorbitol-6-phosphate 2-dehydrogenase YP_002635405.1 2385782 D 396513 CDS YP_002635406.1 224477800 7552141 2386603..2388489 1 NC_012121.1 (P46321) Probable licABCH operon regulator,InterPro: Transcriptional antiterminator bglG; Hypothetical protein; putative regulator of sorbitol operon 2388489 srlM 7552141 srlM Staphylococcus carnosus subsp. carnosus TM300 putative regulator of sorbitol operon YP_002635406.1 2386603 D 396513 CDS YP_002635407.1 224477801 7552142 2388492..2388965 1 NC_012121.1 (P15081) Glucitol operon activator protein; Hypothetical protein; hypothetical protein 2388965 7552142 Sca_2319 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635407.1 2388492 D 396513 CDS YP_002635408.1 224477802 7551227 2388949..2389500 1 NC_012121.1 (P56579) PTS system glucitol/sorbitol-specific IIC2 component (EIIC2-Gut) (Glucitol/sorbitol-permease IIC2 component) (Phosphotransferase enzyme II C2 component),InterPro: PTS system enzyme II sorbitol-specific factor; Hypothetical protein; putative sorbitol PTS, EIIC 2389500 7551227 Sca_2320 Staphylococcus carnosus subsp. carnosus TM300 putative sorbitol PTS, EIIC YP_002635408.1 2388949 D 396513 CDS YP_002635409.1 224477803 7551228 2389512..2390531 1 NC_012121.1 (O32333) PTS system glucitol/sorbitol-specific IIBC component (EIIBC-Gut) (Glucitol/sorbitol-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Gut),InterPro: Sorbitol phosphotransferase enzyme II; Hypothetical protein; putative sorbitol PTS, EIIBC 2390531 7551228 Sca_2321 Staphylococcus carnosus subsp. carnosus TM300 putative sorbitol PTS, EIIBC YP_002635409.1 2389512 D 396513 CDS YP_002635410.1 224477804 7551229 2390576..2390926 1 NC_012121.1 (P59784) PTS system glucitol/sorbitol-specific IIA component (EIIA-Gut) (Glucitol/sorbitol-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Gut),InterPro: PTS system glucitol/sorbitol-specific IIA component; Hypothetical protein; putative sorbitol PTS, EIIA 2390926 7551229 Sca_2322 Staphylococcus carnosus subsp. carnosus TM300 putative sorbitol PTS, EIIA YP_002635410.1 2390576 D 396513 CDS YP_002635411.1 224477805 7551230 complement(2391085..2392335) 1 NC_012121.1 (P53552) RLR1 protein (THO2 protein); Hypothetical protein; hypothetical protein 2392335 7551230 Sca_2323 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635411.1 2391085 R 396513 CDS YP_002635412.1 224477806 7551231 complement(2392339..2393379) 1 NC_012121.1 (P15005) 5-methylcytosine-specific restriction enzyme B (EC 3.1.21.-) (EcoKMcrBC); Hypothetical protein; putative restriction enzyme 2393379 7551231 Sca_2324 Staphylococcus carnosus subsp. carnosus TM300 putative restriction enzyme YP_002635412.1 2392339 R 396513 CDS YP_002635413.1 224477807 7551232 complement(2393615..2394793) 1 NC_012121.1 (P13520) Overcoming lysogenization defect protein; Hypothetical protein; hypothetical protein 2394793 7551232 Sca_2325 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635413.1 2393615 R 396513 CDS YP_002635414.1 224477808 7551233 complement(2394844..2395581) 1 NC_012121.1 (O74475) 13-beta-glucan synthase component bgs4 (EC 2.4.1.34) (13-beta-D-glucan-UDP glucosyltransferase); Hypothetical protein; hypothetical protein 2395581 7551233 Sca_2326 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635414.1 2394844 R 396513 CDS YP_002635415.1 224477809 7551234 2395874..2396827 1 NC_012121.1 (P46017) FraH protein; Hypothetical protein; hypothetical protein 2396827 7551234 Sca_2327 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635415.1 2395874 D 396513 CDS YP_002635416.1 224477810 7551235 2396827..2398131 1 NC_012121.1 (Q9UUL4) Cell wall alpha-13-glucan synthase mok12 (EC 2.4.1.183); Hypothetical protein; hypothetical protein 2398131 7551235 Sca_2328 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635416.1 2396827 D 396513 CDS YP_002635417.1 224477811 7551236 complement(2398209..2398604) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2398604 7551236 Sca_2329 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635417.1 2398209 R 396513 CDS YP_002635418.1 224477812 7551237 2398955..2399317 1 NC_012121.1 (Q58721) Putative HTH-type transcriptional regulator MJ1325,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein; putative ArsR family transcriptional regulator 2399317 7551237 Sca_2330 Staphylococcus carnosus subsp. carnosus TM300 putative ArsR family transcriptional regulator YP_002635418.1 2398955 D 396513 CDS YP_002635419.1 224477813 7551238 2399319..2400551 1 NC_012121.1 (P32382) NADH oxidase (EC 1.-.-.-),InterPro: NADH:flavin oxidoreductase/NADH oxidase; Hypothetical protein; putative NADH oxidase-related oxidoreductase protein 2400551 7551238 Sca_2331 Staphylococcus carnosus subsp. carnosus TM300 putative NADH oxidase-related oxidoreductase protein YP_002635419.1 2399319 D 396513 CDS YP_002635420.1 224477814 7551239 2400597..2401535 1 NC_012121.1 (Q99390) Hypothetical 31.7 kDa protein in traX-finO intergenic region (ORFC),InterPro: Esterase/lipase/thioesterase; Hypothetical protein; hypothetical protein 2401535 7551239 Sca_2332 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635420.1 2400597 D 396513 CDS YP_002635421.1 224477815 7551240 complement(2401651..2402781) 1 NC_012121.1 (Q9CLT9) Acetylornithine deacetylase (EC 3.5.1.16) (Acetylornithinase) (AO) (N-acetylornithinase) (NAO),InterPro: Peptidase M20/M25/M40; Hypothetical protein; putative succinyl-diaminopimelate desuccinylase 2402781 7551240 Sca_2333 Staphylococcus carnosus subsp. carnosus TM300 putative succinyl-diaminopimelate desuccinylase YP_002635421.1 2401651 R 396513 CDS YP_002635422.1 224477816 7551241 complement(2402895..2403020) 1 NC_012121.1 no Shine-Dalgarno sequence,(Q9TM05) ATP-dependent Clp protease ATP-binding subunit clpA; Hypothetical protein; hypothetical protein 2403020 7551241 Sca_2334 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635422.1 2402895 R 396513 CDS YP_002635423.1 224477817 7551242 2403415..2404467 1 NC_012121.1 (P79896) Alcohol dehydrogenase class III (EC 1.1.1.1) (Glutathione-dependent formaldehyde dehydrogenase) (EC 1.2.1.1) (FDH) (FALDH),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Conserved hypothetical protein; alcohol dehydrogenase, zinc-containing 2404467 gutB 7551242 gutB Staphylococcus carnosus subsp. carnosus TM300 alcohol dehydrogenase, zinc-containing YP_002635423.1 2403415 D 396513 CDS YP_002635424.1 224477818 7551674 2404691..2406187 1 NC_012121.1 (Q9ZN99) Catalase (EC 1.11.1.6),InterPro: Catalase; Conserved hypothetical protein; catalase 2406187 katA 7551674 katA Staphylococcus carnosus subsp. carnosus TM300 catalase YP_002635424.1 2404691 D 396513 CDS YP_002635425.1 224477819 7551725 2406256..2406576 1 NC_012121.1 (Q88KJ1) Trigger factor (TF); Hypothetical protein; hypothetical protein 2406576 7551725 Sca_2337 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635425.1 2406256 D 396513 CDS YP_002635426.1 224477820 7551243 complement(2406630..2407550) 1 NC_012121.1 (P37513) Hypothetical protein yyaK,InterPro: Abortive infection protein; Hypothetical protein; hypothetical protein 2407550 7551243 Sca_2338 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635426.1 2406630 R 396513 CDS YP_002635427.1 224477821 7551244 2407912..2408670 1 NC_012121.1 no Shine-Dalgarno sequence,(P46490) Hypothetical protein HI0198,InterPro: Protein of unknown function DUF81; Hypothetical protein; hypothetical protein 2408670 7551244 Sca_2339 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635427.1 2407912 D 396513 CDS YP_002635428.1 224477822 7551245 2408759..2409661 1 NC_012121.1 (Q58111) Hypothetical UPF0003 protein MJ0700,InterPro: Mechanosensitive (MS) ion channel; Hypothetical protein; hypothetical protein 2409661 7551245 Sca_2340 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635428.1 2408759 D 396513 CDS YP_002635429.1 224477823 7551246 complement(2410112..2410975) 1 NC_012121.1 truncated (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase); Hypothetical protein; hypothetical protein 2410975 7551246 Sca_2341 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635429.1 2410112 R 396513 CDS YP_002635430.1 224477824 7551247 complement(2411012..2412355) 1 NC_012121.1 (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase),InterPro: Glycoside hydrolase family 3 N-terminal; Hypothetical protein; putative glucosidase 2412355 7551247 Sca_2342 Staphylococcus carnosus subsp. carnosus TM300 putative glucosidase YP_002635430.1 2411012 R 396513 CDS YP_002635431.1 224477825 7551248 2412420..2413010 1 NC_012121.1 Hypothetical protein; hypothetical protein 2413010 7551248 Sca_2343 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635431.1 2412420 D 396513 CDS YP_002635432.1 224477826 7551249 complement(2413102..2413659) 1 NC_012121.1 (Q57491) Hypothetical sugar transferase HI0872 (EC 2.-.-.-),InterPro: Bacterial sugar transferase; Conserved hypothetical protein; capsular polysaccharide synthesis enzyme Cap5M 2413659 capM 7551249 capM Staphylococcus carnosus subsp. carnosus TM300 capsular polysaccharide synthesis enzyme Cap5M YP_002635432.1 2413102 R 396513 CDS YP_002635433.1 224477827 7551461 complement(2413660..2414550) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2414550 7551461 Sca_2345 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635433.1 2413660 R 396513 CDS YP_002635434.1 224477828 7551250 complement(2414547..2415707) 1 NC_012121.1 similar to Capsular polysaccharide biosynthesis glycosyl transferase capM ,(P39862) Capsular polysaccharide biosynthesis glycosyl transferase capM (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein; putative capsular polysaccharide biosynthesis protein 2415707 7551250 Sca_2346 Staphylococcus carnosus subsp. carnosus TM300 putative capsular polysaccharide biosynthesis protein YP_002635434.1 2414547 R 396513 CDS YP_002635435.1 224477829 7551251 complement(2415712..2416668) 1 NC_012121.1 (O51317) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) (Glu-ADT subunit A); Hypothetical protein; hypothetical protein 2416668 7551251 Sca_2347 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635435.1 2415712 R 396513 CDS YP_002635436.1 224477830 7551252 complement(2416670..2417944) 1 NC_012121.1 (P39861) CapL protein,InterPro: UDP-glucose/GDP-mannose dehydrogenase; Conserved hypothetical protein; capsular polysaccharide biosynthesis protein CapL 2417944 capL 7551252 capL Staphylococcus carnosus subsp. carnosus TM300 capsular polysaccharide biosynthesis protein CapL YP_002635436.1 2416670 R 396513 CDS YP_002635437.1 224477831 7551460 complement(2417992..2419005) 1 NC_012121.1 (P39858) CapI protein,InterPro: NAD-dependent epimerase/dehydratase; Hypothetical protein; capsular polysaccharide biosynthesis protein Cap I 2419005 capI 7551460 capI Staphylococcus carnosus subsp. carnosus TM300 capsular polysaccharide biosynthesis protein Cap I YP_002635437.1 2417992 R 396513 CDS YP_002635438.1 224477832 7551459 complement(2419008..2420060) 1 NC_012121.1 (Q9R9N0) Lipopolysaccharide core biosynthesis glycosyl transferase lpsD (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein; hypothetical protein 2420060 7551459 Sca_2350 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635438.1 2419008 R 396513 CDS YP_002635439.1 224477833 7551253 complement(2420076..2421443) 1 NC_012121.1 (P37781) Putative O-antigen transporter,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein; hypothetical protein 2421443 7551253 Sca_2351 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635439.1 2420076 R 396513 CDS YP_002635440.1 224477834 7551254 complement(2421436..2422737) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2422737 7551254 Sca_2352 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635440.1 2421436 R 396513 CDS YP_002635441.1 224477835 7551255 complement(2422762..2424138) 1 NC_012121.1 (P39853) Capsular polysaccharide biosynthesis protein capD,InterPro: Polysaccharide biosynthesis protein CapD,Similar to C-terminal part (aa 127-599) of capsular polysaccharide biosynthesis protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300153): 611 aa; Conserved hypothetical protein; capsular polysaccharide synthesis enzyme CapD (fragment 2) 2424138 capD'' 7551255 capD'' Staphylococcus carnosus subsp. carnosus TM300 capsular polysaccharide synthesis enzyme CapD (fragment 2) YP_002635441.1 2422762 R 396513 CDS YP_002635442.1 224477836 7551458 complement(2424190..2424567) 1 NC_012121.1 (P39853) Capsular polysaccharide biosynthesis protein capD,Similar to N-terminus (aa 1-125) of capsular polysaccharide biosynthesis protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300153): 611 aa; Hypothetical protein; capsular polysaccharide synthesis enzyme CapD (fragment 1) 2424567 capD' 7551458 capD' Staphylococcus carnosus subsp. carnosus TM300 capsular polysaccharide synthesis enzyme CapD (fragment 1) YP_002635442.1 2424190 R 396513 CDS YP_002635443.1 224477837 7551457 complement(2424591..2425355) 1 NC_012121.1 (P96717) Putative protein-tyrosine phosphatase ywqE (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Conserved hypothetical protein; capsular polysaccharide biosynthesis protein 2425355 capC 7551457 capC Staphylococcus carnosus subsp. carnosus TM300 capsular polysaccharide biosynthesis protein YP_002635443.1 2424591 R 396513 CDS YP_002635444.1 224477838 7551455 complement(2425355..2426053) 1 NC_012121.1 (P39851) Putative tyrosine-protein kinase capB (EC 2.7.1.112),InterPro: Exopolysaccharide synthesis protein; Conserved hypothetical protein; capsular polysaccharide biosynthesis protein 2426053 capB 7551455 capB Staphylococcus carnosus subsp. carnosus TM300 capsular polysaccharide biosynthesis protein YP_002635444.1 2425355 R 396513 CDS YP_002635445.1 224477839 7551452 complement(2426072..2426743) 1 NC_012121.1 (P71050) Hypothetical protein yveK,InterPro: Lipopolysaccharide biosynthesis; Conserved hypothetical protein; putative capsular polysaccharide synthesis enzyme Cap5A 2426743 capA 7551452 capA Staphylococcus carnosus subsp. carnosus TM300 putative capsular polysaccharide synthesis enzyme Cap5A YP_002635445.1 2426072 R 396513 CDS YP_002635446.1 224477840 7551451 complement(2427045..2427680) 1 NC_012121.1 (Q58677) Hypothetical protein MJ1281; Hypothetical protein; hypothetical protein 2427680 7551451 Sca_2358 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635446.1 2427045 R 396513 CDS YP_002635447.1 224477841 7551256 complement(2427918..2428469) 1 NC_012121.1 (P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Conserved hypothetical protein; TetR family transcriptional regulator 2428469 7551256 Sca_2359 Staphylococcus carnosus subsp. carnosus TM300 TetR family transcriptional regulator YP_002635447.1 2427918 R 396513 CDS YP_002635448.1 224477842 7551257 complement(2428637..2429551) 1 NC_012121.1 (P42243) Hypothetical transport protein ycbK,InterPro: Protein of unknown function DUF6; Hypothetical protein; putative transport protein 2429551 7551257 Sca_2360 Staphylococcus carnosus subsp. carnosus TM300 putative transport protein YP_002635448.1 2428637 R 396513 CDS YP_002635449.1 224477843 7551258 complement(2429671..2430978) 1 NC_012121.1 (P42308) Citrate transporter,InterPro: Citrate transporter; Conserved hypothetical protein; citrat transporter 2430978 citH 7551258 citH Staphylococcus carnosus subsp. carnosus TM300 citrat transporter YP_002635449.1 2429671 R 396513 CDS YP_002635450.1 224477844 7551470 complement(2431158..2432237) 1 NC_012121.1 similar to succinyl-diaminopimelate desuccinylase (Q931I4),Probable succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) (SDAP),InterPro: Peptidase M20/M25/M40; Hypothetical protein; hypothetical protein 2432237 7551470 Sca_2362 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635450.1 2431158 R 396513 CDS YP_002635451.1 224477845 7551259 2432442..2433881 1 NC_012121.1 (P24549) Aldehyde dehydrogenase 1A1 (EC 1.2.1.3) (Aldehyde dehydrogenase cytosolic) (ALDH class 1) (ALHDII) (ALDH-E1),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein; succinate-semialdehyde dehydrogenase (NADP+) 2433881 gabD 7551259 gabD Staphylococcus carnosus subsp. carnosus TM300 succinate-semialdehyde dehydrogenase (NADP+) YP_002635451.1 2432442 D 396513 CDS YP_002635452.1 224477846 7551603 2433902..2435323 1 NC_012121.1 (P36205) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS),InterPro: Glutamine synthetase catalytic domain; Conserved hypothetical protein; putative glutamine synthetase 2435323 7551603 Sca_2364 Staphylococcus carnosus subsp. carnosus TM300 putative glutamine synthetase YP_002635452.1 2433902 D 396513 CDS YP_002635453.1 224477847 7551260 2435373..2436140 1 NC_012121.1 (Q9X248) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein; putative oxidoreductase 2436140 7551260 Sca_2365 Staphylococcus carnosus subsp. carnosus TM300 putative oxidoreductase YP_002635453.1 2435373 D 396513 CDS YP_002635454.1 224477848 7551261 complement(2436320..2437603) 1 NC_012121.1 similar to ethanolamine utilization protein EutH -Escherichia coli,(P41796) Ethanolamine utilization protein eutH (Putative ethanolamine transporter),InterPro: Ethanolamine utilisation protein EutH; Hypothetical protein; hypothetical protein 2437603 7551261 Sca_2366 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635454.1 2436320 R 396513 CDS YP_002635455.1 224477849 7551262 complement(2437769..2438359) 1 NC_012121.1 (O29221) Chemotaxis response regulator protein-glutamate methylesterase (EC 3.1.1.61),InterPro: Response regulator antiterminator; Hypothetical protein; putative two-component system response regulator 2438359 7551262 Sca_2367 Staphylococcus carnosus subsp. carnosus TM300 putative two-component system response regulator YP_002635455.1 2437769 R 396513 CDS YP_002635456.1 224477850 7551263 complement(2438340..2439665) 1 NC_012121.1 similar to two-component sensor histidine kinase,(P27896) Nitrate/nitrite sensor protein narQ (EC 2.7.3.-),InterPro: ATP-binding region ATPase-like; Hypothetical protein; hypothetical protein 2439665 7551263 Sca_2368 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635456.1 2438340 R 396513 CDS YP_002635457.1 224477851 7551264 complement(2439964..2440701) 1 NC_012121.1 (Q9EYI7) Probable acetoacetate decarboxylase (EC 4.1.1.4) (ADC) (AAD); Conserved hypothetical protein; putative acetoacetate decarboxylase 2440701 adc 7551264 adc Staphylococcus carnosus subsp. carnosus TM300 putative acetoacetate decarboxylase YP_002635457.1 2439964 R 396513 CDS YP_002635458.1 224477852 7551370 complement(2440716..2441744) 1 NC_012121.1 similar to 2-dehydropantoate 2-reductase ,(Q9A0B3) Putative 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR),InterPro: Ketopantoate reductase ApbA/PanE; Hypothetical protein; hypothetical protein 2441744 7551370 Sca_2370 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635458.1 2440716 R 396513 CDS YP_002635459.1 224477853 7551265 2441844..2442728 1 NC_012121.1 similar to transcriptional regulator, LysR family,(O78432) Putative HTH-type transcriptional regulator ycf30,InterPro: Bacterial regulatory protein LysR HTH motif; Hypothetical protein; hypothetical protein 2442728 7551265 Sca_2371 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635459.1 2441844 D 396513 CDS YP_002635460.1 224477854 7551266 complement(2442766..2443893) 1 NC_012121.1 (P25405) Alcohol dehydrogenase I-A (EC 1.1.1.1) (ADH IA),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Conserved hypothetical protein; putative alcohol dehydrogenase 2443893 adhC 7551266 adhC Staphylococcus carnosus subsp. carnosus TM300 putative alcohol dehydrogenase YP_002635460.1 2442766 R 396513 CDS YP_002635461.1 224477855 7551373 complement(2443907..2444755) 1 NC_012121.1 (Q9QXK7) Cleavage and polyadenylation specificity factor 73 kDa subunit (CPSF 73 kDa subunit),InterPro: Beta-lactamase-like; Hypothetical protein; hypothetical protein 2444755 7551373 Sca_2373 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635461.1 2443907 R 396513 CDS YP_002635462.1 224477856 7551267 2444966..2446348 1 NC_012121.1 (P24549) Aldehyde dehydrogenase 1A1 (EC 1.2.1.3) (Aldehyde dehydrogenase cytosolic) (ALDH class 1) (ALHDII) (ALDH-E1),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein; succinate-semialdehyde dehydrogenase 2446348 gabD 7551267 gabD Staphylococcus carnosus subsp. carnosus TM300 succinate-semialdehyde dehydrogenase YP_002635462.1 2444966 D 396513 CDS YP_002635463.1 224477857 7551604 2446495..2447109 1 NC_012121.1 (P70976) Hypothetical protein ybaJ; Hypothetical protein; hypothetical protein 2447109 7551604 Sca_2375 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635463.1 2446495 D 396513 CDS YP_002635464.1 224477858 7551268 complement(2447422..2447964) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2447964 7551268 Sca_2376 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635464.1 2447422 R 396513 CDS YP_002635465.1 224477859 7551269 complement(2448392..2449381) 1 NC_012121.1 (P10548) Lysostaphin precursor (EC 3.4.24.75) (Glycyl-glycine endopeptidase),InterPro: Peptidase M23/M37,Note: this sequence is about 80 aa longer than similar sequences from other staphylococci.; Hypothetical protein; putative LytM-like peptidoglycan hydrolase 2449381 lytM 7551269 lytM Staphylococcus carnosus subsp. carnosus TM300 putative LytM-like peptidoglycan hydrolase YP_002635465.1 2448392 R 396513 CDS YP_002635466.1 224477860 7551764 complement(2449890..2450699) 1 NC_012121.1 (P36650) Icc protein,InterPro: Metallo-phosphoesterase; Hypothetical protein; hypothetical protein 2450699 7551764 Sca_2378 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635466.1 2449890 R 396513 CDS YP_002635467.1 224477861 7551270 2451018..2451251 1 NC_012121.1 Hypothetical protein; hypothetical protein 2451251 7551270 Sca_2379 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635467.1 2451018 D 396513 CDS YP_002635468.1 224477862 7551271 complement(2451371..2451991) 1 NC_012121.1 (P96707) Putative NAD(P)H nitroreductase ydgI (EC 1.-.-.-),InterPro: Nitroreductase family; Conserved hypothetical protein; putative NAD(P)H nitroreductase 2451991 7551271 Sca_2380 Staphylococcus carnosus subsp. carnosus TM300 putative NAD(P)H nitroreductase YP_002635468.1 2451371 R 396513 CDS YP_002635469.1 224477863 7551272 2452063..2452413 1 NC_012121.1 (P44558) Putative HTH-type transcriptional regulator HI0186,InterPro: Bacterial regulatory protein MerR family; Hypothetical protein; putative transcriptional regulator 2452413 7551272 Sca_2381 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002635469.1 2452063 D 396513 CDS YP_002635470.1 224477864 7551273 complement(2452574..2453434) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2453434 7551273 Sca_2382 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635470.1 2452574 R 396513 CDS YP_002635471.1 224477865 7551274 complement(2453692..2454429) 1 NC_012121.1 (P20187) Hypothetical 37.1 kDa protein in transposon TN4556,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein; hypothetical protein 2454429 7551274 Sca_2383 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635471.1 2453692 R 396513 CDS YP_002635472.1 224477866 7551275 complement(2454500..2455864) 1 NC_012121.1 (Q10875) Hypothetical transport protein Rv1979c/MT2031,InterPro: Amino acid permease-associated region; Hypothetical protein; hypothetical protein 2455864 7551275 Sca_2384 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635472.1 2454500 R 396513 CDS YP_002635473.1 224477867 7551276 complement(2455869..2456594) 1 NC_012121.1 (Q9ZDC7) Hypothetical protein RP404,InterPro: Glutamine amidotransferase class-I; Hypothetical protein; hypothetical protein 2456594 7551276 Sca_2385 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635473.1 2455869 R 396513 CDS YP_002635474.1 224477868 7551277 complement(<2456726..2457073) 1 NC_012121.1 Similar to C-terminal part (aa 347-454) of amino acid permease [Lactobacillus reuteri JCM 1112] (ZP_01164202): 464 aa; Hypothetical protein; hypothetical protein 2457073 7551277 Sca_2386 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635474.1 <2456726 R 396513 CDS YP_002635475.1 224477869 7551278 complement(<2457089..2458102) 1 NC_012121.1 Similar to N-terminal part (aa 5-354) of amino acid permease [Lactobacillus reuteri JCM 1112] (ZP_01164202): 464 aa; Hypothetical protein; hypothetical protein 2458102 7551278 Sca_2387 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635475.1 <2457089 R 396513 CDS YP_002635476.1 224477870 7551279 complement(2458249..2459784) 1 NC_012121.1 (O70247) Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter),InterPro: Na+/solute symporter; Conserved hypothetical protein; solute:Na+ symporter protein, SSS family 2459784 7551279 Sca_2388 Staphylococcus carnosus subsp. carnosus TM300 solute:Na+ symporter protein, SSS family YP_002635476.1 2458249 R 396513 CDS YP_002635477.1 224477871 7551280 complement(2459814..2460695) 1 NC_012121.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase 2460695 nanA 7551280 nanA Staphylococcus carnosus subsp. carnosus TM300 N-acetylneuraminate lyase YP_002635477.1 2459814 R 396513 CDS YP_002635478.1 224477872 7551845 2460941..2461807 1 NC_012121.1 similar to glucokinase,(P26832) Hypothetical protein CPE0188,InterPro: ROK family; Conserved hypothetical protein; hypothetical protein 2461807 7551845 Sca_2390 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635478.1 2460941 D 396513 CDS YP_002635479.1 224477873 7551281 complement(2461902..2462714) 1 NC_012121.1 (P44540) Putative HTH-type transcriptional regulator HI0143,InterPro: Sugar isomerase (SIS); Conserved hypothetical protein; hypothetical protein 2462714 7551281 Sca_2391 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635479.1 2461902 R 396513 CDS YP_002635480.1 224477874 7551282 2462880..2463554 1 NC_012121.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 2463554 7551282 Sca_2392 Staphylococcus carnosus subsp. carnosus TM300 N-acetylmannosamine-6-phosphate 2-epimerase YP_002635480.1 2462880 D 396513 CDS YP_002635481.1 224477875 7551283 2463577..2464305 1 NC_012121.1 (Q99W40) Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase),InterPro: Glucosamine-6-phosphate isomerase; Conserved hypothetical protein; glucosamine-6-phosphate isomerase 2464305 nagB 7551283 nagB Staphylococcus carnosus subsp. carnosus TM300 glucosamine-6-phosphate isomerase YP_002635481.1 2463577 D 396513 CDS YP_002635482.1 224477876 7551844 2464431..2464847 1 NC_012121.1 Hypothetical protein; hypothetical protein 2464847 7551844 Sca_2394 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635482.1 2464431 D 396513 CDS YP_002635483.1 224477877 7551284 complement(2464888..2465838) 1 NC_012121.1 similar to divalent cation transport ,(P40948) Hypothetical protein yqxL,InterPro: Mg2+ transporter protein CorA-like; Hypothetical protein; putative CorA-like Mg2+ transporter protein 2465838 7551284 Sca_2395 Staphylococcus carnosus subsp. carnosus TM300 putative CorA-like Mg2+ transporter protein YP_002635483.1 2464888 R 396513 CDS YP_002635484.1 224477878 7551285 complement(2466085..2468448) 1 NC_012121.1 (P10335) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),InterPro: Esterase/lipase/thioesterase; High confidence in function and specificity; triacylglycerol lipase 2468448 lip 7551285 lip Staphylococcus carnosus subsp. carnosus TM300 triacylglycerol lipase YP_002635484.1 2466085 R 396513 CDS YP_002635485.1 224477879 7551751 complement(2468769..2469452) 1 NC_012121.1 (Q04902) Hypothetical 26.0 kDa protein in FET4-ERR1 intergenic region,InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein; ThiJ/PfpI family protein 2469452 7551751 Sca_2397 Staphylococcus carnosus subsp. carnosus TM300 ThiJ/PfpI family protein YP_002635485.1 2468769 R 396513 CDS YP_002635486.1 224477880 7551286 2469801..2470775 1 NC_012121.1 Hypothetical protein; hypothetical protein 2470775 7551286 Sca_2398 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635486.1 2469801 D 396513 CDS YP_002635487.1 224477881 7551287 2470759..2470998 1 NC_012121.1 (P60077) Hypothetical UPF0291 protein SA2360; Hypothetical protein; hypothetical protein 2470998 7551287 Sca_2399 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635487.1 2470759 D 396513 CDS YP_002635488.1 224477882 7551288 complement(2471083..2471670) 1 NC_012121.1 (Q98DM0) 23-bisphosphoglycerate-dependent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM),InterPro: Phosphoglycerate/bisphosphoglycerate mutase; Hypothetical protein; phosphoglycerate mutase family protein 2471670 pgm5 7551288 pgm5 Staphylococcus carnosus subsp. carnosus TM300 phosphoglycerate mutase family protein YP_002635488.1 2471083 R 396513 CDS YP_002635489.1 224477883 7551934 2471912..2472532 1 NC_012121.1 (O05406) Hypothetical protein yrhP,InterPro: Lysine exporter protein (LYSE/YGGA); Hypothetical protein; hypothetical protein 2472532 7551934 Sca_2401 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635489.1 2471912 D 396513 CDS YP_002635490.1 224477884 7551289 complement(2472577..2474832) 1 NC_012121.1 (O26543) UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A),InterPro: AAA ATPase; Hypothetical protein; putative exinuclease ABC subunit A 2474832 7551289 Sca_2402 Staphylococcus carnosus subsp. carnosus TM300 putative exinuclease ABC subunit A YP_002635490.1 2472577 R 396513 CDS YP_002635491.1 224477885 7551290 complement(2474946..2477261) 1 NC_012121.1 (P46918) Minor teichoic acid biosynthesis protein ggaB,InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Conserved hypothetical protein; hypothetical protein 2477261 7551290 Sca_2403 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635491.1 2474946 R 396513 CDS YP_002635492.1 224477886 7551291 complement(2477395..2479950) 1 NC_012121.1 (P46918) Minor teichoic acid biosynthesis protein ggaB,InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Conserved hypothetical protein; hypothetical protein 2479950 7551291 Sca_2404 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635492.1 2477395 R 396513 CDS YP_002635493.1 224477887 7551292 complement(2479967..2480110) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2480110 7551292 Sca_2405 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635493.1 2479967 R 396513 CDS YP_002635494.1 224477888 7551293 2480494..2482050 1 NC_012121.1 Conserved hypothetical protein; putative acetyl-CoA transferase 2482050 fadX 7551293 fadX Staphylococcus carnosus subsp. carnosus TM300 putative acetyl-CoA transferase YP_002635494.1 2480494 D 396513 CDS YP_002635495.1 224477889 7551560 2482080..2483597 1 NC_012121.1 (P94547) Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (Long-chain acyl-CoA synthetase),InterPro: AMP-dependent synthetase and ligase; Conserved hypothetical protein; putative acid-CoA ligase 2483597 fadE 7551560 fadE Staphylococcus carnosus subsp. carnosus TM300 putative acid-CoA ligase YP_002635495.1 2482080 D 396513 CDS YP_002635496.1 224477890 7551559 2483677..2484885 1 NC_012121.1 (Q20772) Probable glutaryl-CoA dehydrogenase mitochondrial precursor (EC 1.3.99.7) (GCD),InterPro: Acyl-CoA dehydrogenase C-terminal; Conserved hypothetical protein; putative glutaryl-CoA dehydrogenase 2484885 7551559 Sca_2408 Staphylococcus carnosus subsp. carnosus TM300 putative glutaryl-CoA dehydrogenase YP_002635496.1 2483677 D 396513 CDS YP_002635497.1 224477891 7551294 2484930..2487191 1 NC_012121.1 (P40939) Trifunctional enzyme alpha subunit mitochondrial precursor (TP-alpha) (78 kDa gastrin-binding protein) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)],InterPro: 3-hydroxyacyl-CoA dehydrogenase NAD binding domain; Conserved hypothetical protein; putative fatty oxidation complex protein 2487191 7551294 Sca_2409 Staphylococcus carnosus subsp. carnosus TM300 putative fatty oxidation complex protein YP_002635497.1 2484930 D 396513 CDS YP_002635498.1 224477892 7551295 2487222..2488406 1 NC_012121.1 (P09110) 3-ketoacyl-CoA thiolase peroxisomal precursor (EC 2.3.1.16) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) (Peroxisomal 3-oxoacyl-CoA thiolase),InterPro: Thiolase; Conserved hypothetical protein; putative acetyl-CoA acetyltransferase 2488406 fadA 7551295 fadA Staphylococcus carnosus subsp. carnosus TM300 putative acetyl-CoA acetyltransferase YP_002635498.1 2487222 D 396513 CDS YP_002635499.1 224477893 7551558 2488535..2489074 1 NC_012121.1 (P52080) Hypothetical UPF0039 protein SAV1054/SA0906/MW0937 (ORF3),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein; hypothetical protein 2489074 7551558 Sca_2411 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635499.1 2488535 D 396513 CDS YP_002635500.1 224477894 7551296 complement(2489064..2490008) 1 NC_012121.1 similar to GlpX type II fructose-1,6-bisphosphatase; fructose 1,6-bisphosphatase II 2490008 7551296 Sca_2412 Staphylococcus carnosus subsp. carnosus TM300 fructose 1,6-bisphosphatase II YP_002635500.1 2489064 R 396513 CDS YP_002635501.1 224477895 7551297 complement(2490013..2490456) 1 NC_012121.1 similar to ribose 5-phosphate isomerase B ,(Q8CRJ3) Galactose-6-phosphate isomerase lacB subunit (EC 5.3.1.26),InterPro: Ribose/galactose isomerase; Hypothetical protein; ribose 5-phosphate isomerase B-like protein 2490456 7551297 Sca_2413 Staphylococcus carnosus subsp. carnosus TM300 ribose 5-phosphate isomerase B-like protein YP_002635501.1 2490013 R 396513 CDS YP_002635502.1 224477896 7551298 complement(2490469..2491098) 1 NC_012121.1 similar to dihydroxyacetone kinase ,similar to glycerone kinase EC 2.7.1.29,(P76014) Protein ycgS,InterPro: Dak phosphatase domain; Hypothetical protein; hypothetical protein 2491098 7551298 Sca_2414 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635502.1 2490469 R 396513 CDS YP_002635503.1 224477897 7551299 complement(2491085..2492104) 1 NC_012121.1 (P76015) Hypothetical protein ycgT,InterPro: Dak kinase domain; Hypothetical protein; dihydroxyacetone kinase family protein 2492104 7551299 Sca_2415 Staphylococcus carnosus subsp. carnosus TM300 dihydroxyacetone kinase family protein YP_002635503.1 2491085 R 396513 CDS YP_002635504.1 224477898 7551300 complement(2492120..2493304) 1 NC_012121.1 (O05390) Alpha-ketoglutarate permease,InterPro: General substrate transporter; High confidence in function and specificity; putative alpha-ketoglutarate permease 2493304 7551300 Sca_2416 Staphylococcus carnosus subsp. carnosus TM300 putative alpha-ketoglutarate permease YP_002635504.1 2492120 R 396513 CDS YP_002635505.1 224477899 7551301 complement(2493454..2494536) 1 NC_012121.1 Hypothetical protein; putative zinc-binding dehydrogenase 2494536 gutB 7551301 gutB Staphylococcus carnosus subsp. carnosus TM300 putative zinc-binding dehydrogenase YP_002635505.1 2493454 R 396513 CDS YP_002635506.1 224477900 7551675 2494712..2495482 1 NC_012121.1 (P77721) Putative HTH-type transcriptional regulator ydjF,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein; putative regulatory protein 2495482 glpR2 7551675 glpR2 Staphylococcus carnosus subsp. carnosus TM300 putative regulatory protein YP_002635506.1 2494712 D 396513 CDS YP_002635507.1 224477901 7551645 complement(2495603..2496517) 1 NC_012121.1 (P44331) Ribokinase (EC 2.7.1.15),InterPro: Carbohydrate kinase PfkB; High confidence in function and specificity; ribokinase 2496517 rbsK 7551645 rbsK Staphylococcus carnosus subsp. carnosus TM300 ribokinase YP_002635507.1 2495603 R 396513 CDS YP_002635508.1 224477902 7552010 complement(2496536..2496940) 1 NC_012121.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 2496940 rbsD 7552010 rbsD Staphylococcus carnosus subsp. carnosus TM300 D-ribose pyranase YP_002635508.1 2496536 R 396513 CDS YP_002635509.1 224477903 7552009 complement(2496966..2497847) 1 NC_012121.1 (P60946) Putative ribose uptake protein rbsU; Conserved hypothetical protein; putative sugar transport protein 2497847 7552009 Sca_2421 Staphylococcus carnosus subsp. carnosus TM300 putative sugar transport protein YP_002635509.1 2496966 R 396513 CDS YP_002635510.1 224477904 7551302 complement(2498051..2498365) 1 NC_012121.1 local similarity to (Q9CPA2) Ribose operon repressor; Hypothetical protein; hypothetical protein 2498365 7551302 Sca_2422 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635510.1 2498051 R 396513 CDS YP_002635511.1 224477905 7551303 complement(2498432..2499043) 1 NC_012121.1 (P37947) HTH-type transcriptional regulator degA (Degradation activator),InterPro: Bacterial regulatory protein LacI HTH motif; Conserved hypothetical protein; hypothetical protein 2499043 7551303 Sca_2423 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635511.1 2498432 R 396513 CDS YP_002635512.1 224477906 7551304 2499224..2499748 1 NC_012121.1 (O04885) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein; hypothetical protein 2499748 7551304 Sca_2424 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635512.1 2499224 D 396513 CDS YP_002635513.1 224477907 7551305 2499992..2500834 1 NC_012121.1 (P39315) Hypothetical protein ytfG; Hypothetical protein; hypothetical protein 2500834 7551305 Sca_2425 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635513.1 2499992 D 396513 CDS YP_002635514.1 224477908 7551306 complement(2500999..2501499) 1 NC_012121.1 similar to immunodominant antigen B, Staphylococcus aureus, 170AA, Expect = 6e-12, Identities = 48/170 (28%),Positives = 78/170 (45%), Gaps = 11/170 (6%),(Q92E82) ATP phosphoribosyltransferase regulatory subunit; Hypothetical protein; hypothetical protein 2501499 7551306 Sca_2426 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635514.1 2500999 R 396513 CDS YP_002635515.1 224477909 7551307 complement(2501722..2502099) 1 NC_012121.1 no Shine Dalgarno sequence,Only local similarity to:,(P46324) Hypothetical protein yvrN,InterPro: Protein of unknown function DUF214; Hypothetical protein; hypothetical protein 2502099 7551307 Sca_2427 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635515.1 2501722 R 396513 CDS YP_002635516.1 224477910 7551308 complement(2502595..2503044) 1 NC_012121.1 only local similarity to:,(P37503) Putative HTH-type transcriptional regulator yybA,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein; hypothetical protein 2503044 7551308 Sca_2428 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635516.1 2502595 R 396513 CDS YP_002635517.1 224477911 7551309 complement(2503086..2505914) 1 NC_012121.1 (P49022) Phage infection protein; Hypothetical protein; hypothetical protein 2505914 7551309 Sca_2429 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635517.1 2503086 R 396513 CDS YP_002635518.1 224477912 7551310 2506129..2508255 1 NC_012121.1 similar to autolysin precursor (Staphylococcus epidermidis),(P39046) Muramidase-2 precursor (EC 3.2.1.17) (14-beta-N-acetylmuramoylhydrolase) (Peptidoglycan hydrolase) (Pg-hydrolase-2) (Lysosyme),InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Conserved hypothetical protein; N-acetylmuramoyl-L-alanine amidase 2508255 7551310 Sca_2430 Staphylococcus carnosus subsp. carnosus TM300 N-acetylmuramoyl-L-alanine amidase YP_002635518.1 2506129 D 396513 CDS YP_002635519.1 224477913 7551311 complement(2508330..2510183) 1 NC_012121.1 (P02469) Laminin beta-1 chain precursor (Laminin B1 chain),InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein; hypothetical protein 2510183 7551311 Sca_2431 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635519.1 2508330 R 396513 CDS YP_002635520.1 224477914 7551312 2510426..2510848 1 NC_012121.1 (Q9RA96) Transcriptional regulator slyA (Regulator of antibiotic and pigment protein),InterPro: Bacterial regulatory protein MarR family; Conserved hypothetical protein; MarR family regulatory protein 2510848 7551312 Sca_2432 Staphylococcus carnosus subsp. carnosus TM300 MarR family regulatory protein YP_002635520.1 2510426 D 396513 CDS YP_002635521.1 224477915 7551313 2510961..2512316 1 NC_012121.1 (Q58119) Hypothetical protein MJ0709,InterPro: Multi antimicrobial extrusion protein MatE; Hypothetical protein; hypothetical protein 2512316 7551313 Sca_2433 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635521.1 2510961 D 396513 CDS YP_002635522.1 224477916 7551314 2512530..2513264 1 NC_012121.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2513264 7551314 Sca_2434 Staphylococcus carnosus subsp. carnosus TM300 NAD-dependent deacetylase YP_002635522.1 2512530 D 396513 CDS YP_002635523.1 224477917 7551315 complement(2513328..2514008) 1 NC_012121.1 (Q09675) Hypothetical protein C5H10.02c in chromosome I,InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein; hypothetical protein 2514008 7551315 Sca_2435 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635523.1 2513328 R 396513 CDS YP_002635524.1 224477918 7551316 complement(2514033..2514866) 1 NC_012121.1 no Shine Dalgarno sequence,(P55584) Hypothetical 38.7 kDa protein y4NL; Hypothetical protein; hypothetical protein 2514866 7551316 Sca_2436 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635524.1 2514033 R 396513 CDS YP_002635525.1 224477919 7551317 complement(2515042..2515347) 1 NC_012121.1 no Shine Dalgarno sequence,(Q58721) Putative HTH-type transcriptional regulator MJ1325,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein; hypothetical protein 2515347 7551317 Sca_2437 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635525.1 2515042 R 396513 CDS YP_002635526.1 224477920 7551318 2515609..2516460 1 NC_012121.1 (P77775) Hypothetical UPF0105 protein yfcH; Hypothetical protein; hypothetical protein 2516460 7551318 Sca_2438 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635526.1 2515609 D 396513 CDS YP_002635527.1 224477921 7551319 complement(2516519..2517454) 1 NC_012121.1 (P39841) Mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) (Phosphohexomutase),InterPro: Mannose-6-phosphate isomerase type I; Family membership; mannose-6-phosphate isomerase 2517454 pmi 7551319 pmi Staphylococcus carnosus subsp. carnosus TM300 mannose-6-phosphate isomerase YP_002635527.1 2516519 R 396513 CDS YP_002635528.1 224477922 7551944 complement(2517469..2519421) 1 NC_012121.1 (P23355) PTS system fructose-specific IIBC component (EIIBC-Fru) (Fructose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Fru),InterPro: PTS fructose IIC component; Conserved hypothetical protein; putative fructose phosphotransferase system enzyme fruA 2519421 fruA 7551944 fruA Staphylococcus carnosus subsp. carnosus TM300 putative fructose phosphotransferase system enzyme fruA YP_002635528.1 2517469 R 396513 CDS YP_002635529.1 224477923 7551593 complement(2519500..2521371) 1 NC_012121.1 (P46321) Probable licABCH operon regulator,InterPro: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Conserved hypothetical protein; putative transcriptional regulator 2521371 7551593 Sca_2441 Staphylococcus carnosus subsp. carnosus TM300 putative transcriptional regulator YP_002635529.1 2519500 R 396513 CDS YP_002635530.1 224477924 7551320 complement(2521397..2523403) 1 NC_012121.1 Conserved hypothetical protein; hypothetical protein 2523403 7551320 Sca_2442 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635530.1 2521397 R 396513 CDS YP_002635531.1 224477925 7551321 complement(2523758..2525158) 1 NC_012121.1 similar to,(P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Conserved hypothetical protein; hypothetical protein 2525158 7551321 Sca_2443 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635531.1 2523758 R 396513 CDS YP_002635532.1 224477926 7551322 complement(2525388..2527109) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2527109 7551322 Sca_2444 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635532.1 2525388 R 396513 CDS YP_002635533.1 224477927 7551323 2527413..2528642 1 NC_012121.1 (Q05523) D-alanyl-D-alanine carboxypeptidase precursor (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase) (CPase) (PBP5),InterPro: Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Hypothetical protein; penicillin binding protein 4 2528642 pbp4 7551323 pbp4 Staphylococcus carnosus subsp. carnosus TM300 penicillin binding protein 4 YP_002635533.1 2527413 D 396513 CDS YP_002635534.1 224477928 7551907 2528691..2530109 1 NC_012121.1 similar to,(P71362) L-24-diaminobutyrate decarboxylase (EC 4.1.1.-) (DABA decarboxylase) (DABA-DC),InterPro: Pyridoxal-dependent decarboxylase; Hypothetical protein; hypothetical protein 2530109 7551907 Sca_2446 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635534.1 2528691 D 396513 CDS YP_002635535.1 224477929 7551324 2530303..2530869 1 NC_012121.1 similar to,(P45743) Isochorismatase (EC 3.3.2.1) (23 dihydro-23 dihydroxybenzoate synthase) (Superoxide-inducible protein 1) (SOI1),InterPro: Isochorismatase hydrolase family; Hypothetical protein; hypothetical protein 2530869 7551324 Sca_2447 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635535.1 2530303 D 396513 CDS YP_002635536.1 224477930 7551325 2530880..2532244 1 NC_012121.1 similar to (P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Hypothetical protein; hypothetical protein 2532244 7551325 Sca_2448 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635536.1 2530880 D 396513 CDS YP_002635537.1 224477931 7551326 complement(2532433..2533953) 1 NC_012121.1 similar to (O35018) Lincomycin resistance protein lmrB,InterPro: Major facilitator superfamily; Conserved hypothetical protein; hypothetical protein 2533953 7551326 Sca_2449 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635537.1 2532433 R 396513 CDS YP_002635538.1 224477932 7551327 complement(2534419..2535147) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2535147 7551327 Sca_2450 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635538.1 2534419 R 396513 CDS YP_002635539.1 224477933 7551328 complement(2535721..2536200) 1 NC_012121.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2536200 7551328 Sca_2451 Staphylococcus carnosus subsp. carnosus TM300 rRNA large subunit methyltransferase YP_002635539.1 2535721 R 396513 CDS YP_002635540.1 224477934 7551329 complement(2536638..2537429) 1 NC_012121.1 (P56185) Hypothetical UPF0036 protein HP1430,InterPro: Beta-lactamase-like; Conserved hypothetical protein; hypothetical protein 2537429 7551329 Sca_2452 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635540.1 2536638 R 396513 CDS YP_002635541.1 224477935 7551330 complement(2537756..2538544) 1 NC_012121.1 similar to Yycl protein B. subtilis; Hypothetical protein; hypothetical protein 2538544 7551330 Sca_2453 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635541.1 2537756 R 396513 CDS YP_002635542.1 224477936 7551331 complement(2538541..2539875) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2539875 7551331 Sca_2454 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635542.1 2538541 R 396513 CDS YP_002635543.1 224477937 7551332 complement(2539865..2541709) 1 NC_012121.1 (Q45614) Sensor protein yycG (EC 2.7.3.-),InterPro: Histidine kinase; Family membership; two-component sensor histidine kinase 2541709 7551332 Sca_2455 Staphylococcus carnosus subsp. carnosus TM300 two-component sensor histidine kinase YP_002635543.1 2539865 R 396513 CDS YP_002635544.1 224477938 7551333 complement(2541721..2542422) 1 NC_012121.1 (P37478) Transcriptional regulatory protein yycF,InterPro: Response regulator receiver; Hypothetical protein; putative response regulator 2542422 vicR 7551333 vicR Staphylococcus carnosus subsp. carnosus TM300 putative response regulator YP_002635544.1 2541721 R 396513 CDS YP_002635545.1 224477939 7552295 2542551..2542652 1 NC_012121.1 no Shine Dalgarno sequence; Hypothetical protein; hypothetical protein 2542652 7552295 Sca_2457 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635545.1 2542551 D 396513 CDS YP_002635546.1 224477940 7552218 2543077..2543970 1 NC_012121.1 (P54478) Hypothetical protein yqfU,InterPro: Protein of unknown function DUF161; Hypothetical protein; hypothetical protein 2543970 7552218 Sca_2458 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635546.1 2543077 D 396513 CDS YP_002635547.1 224477941 7551335 complement(2544074..2545360) 1 NC_012121.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2545360 purA 7551335 purA Staphylococcus carnosus subsp. carnosus TM300 adenylosuccinate synthetase YP_002635547.1 2544074 R 396513 CDS YP_002635548.1 224477942 7551971 complement(2545739..2547136) 1 NC_012121.1 (P37469) Replicative DNA helicase (EC 3.6.1.-),InterPro: DnaB helicase; High confidence in function and specificity; Replicative DNA helicase 2547136 dnaC 7551971 dnaC Staphylococcus carnosus subsp. carnosus TM300 Replicative DNA helicase YP_002635548.1 2545739 R 396513 CDS YP_002635549.1 224477943 7551530 complement(2547171..2547617) 1 NC_012121.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2547617 rplI 7551530 rplI Staphylococcus carnosus subsp. carnosus TM300 50S ribosomal protein L9 YP_002635549.1 2547171 R 396513 CDS YP_002635550.1 224477944 7552046 complement(2547614..2549581) 1 NC_012121.1 (P37484) Hypothetical protein yybT,InterPro: GGDEF; Hypothetical protein; hypothetical protein 2549581 7552046 Sca_2462 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635550.1 2547614 R 396513 CDS YP_002635551.1 224477945 7551336 complement(2549596..2550507) 1 NC_012121.1 Hypothetical protein; hypothetical protein 2550507 7551336 Sca_2463 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635551.1 2549596 R 396513 CDS YP_002635552.1 224477946 7551337 2550745..2550852 1 NC_012121.1 Hypothetical protein; hypothetical protein 2550852 7551337 Sca_2464 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635552.1 2550745 D 396513 CDS YP_002635553.1 224477947 7551338 complement(2551561..2552847) 1 NC_012121.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2552847 serS 7551338 serS Staphylococcus carnosus subsp. carnosus TM300 seryl-tRNA synthetase YP_002635553.1 2551561 R 396513 CDS YP_002635554.1 224477948 7552126 complement(2553228..2554742) 1 NC_012121.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 2554742 hutH 7552126 hutH Staphylococcus carnosus subsp. carnosus TM300 histidine ammonia-lyase YP_002635554.1 2553228 R 396513 CDS YP_002635555.1 224477949 7551709 2555005..2555499 1 NC_012121.1 (P53405) Insulin gene enhancer protein ISL-1 (Islet-1),InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein; hypothetical protein 2555499 7551709 Sca_2467 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635555.1 2555005 D 396513 CDS YP_002635556.1 224477950 7551339 2555823..2556686 1 NC_012121.1 (P96051) Hypothetical UPF0031 protein in folD-pbp2B intergenic region (ORF1091),InterPro: Protein of unknown function UPF0031; Conserved hypothetical protein; hypothetical protein 2556686 7551339 Sca_2468 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635556.1 2555823 D 396513 CDS YP_002635557.1 224477951 7551340 complement(2556751..2559429) 1 NC_012121.1 High confidence in function and specificity; DNA gyrase subunit A 2559429 gyrA 7551340 gyrA Staphylococcus carnosus subsp. carnosus TM300 DNA gyrase subunit A YP_002635557.1 2556751 R 396513 CDS YP_002635558.1 224477952 7551676 complement(2559476..2561398) 1 NC_012121.1 High confidence in function and specificity; DNA gyrase subunit B 2561398 gyrB 7551676 gyrB Staphylococcus carnosus subsp. carnosus TM300 DNA gyrase subunit B YP_002635558.1 2559476 R 396513 CDS YP_002635559.1 224477953 7551677 complement(2561420..2562532) 1 NC_012121.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 2562532 recF 7551677 recF Staphylococcus carnosus subsp. carnosus TM300 recombination protein F YP_002635559.1 2561420 R 396513 CDS YP_002635560.1 224477954 7552012 complement(2562529..2562753) 1 NC_012121.1 (P05650) Hypothetical protein yaaA,InterPro: RNA-binding S4; Hypothetical protein; hypothetical protein 2562753 7552012 Sca_2472 Staphylococcus carnosus subsp. carnosus TM300 hypothetical protein YP_002635560.1 2562529 R 396513 CDS YP_002635561.1 224477955 7551341 complement(2563117..2564253) 1 NC_012121.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2564253 dnaN 7551341 dnaN Staphylococcus carnosus subsp. carnosus TM300 DNA polymerase III subunit beta YP_002635561.1 2563117 R 396513 CDS YP_002635562.1 224477956 7551537 complement(2564508..2565869) 1 NC_012121.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 2565869 dnaA 7551537 dnaA Staphylococcus carnosus subsp. carnosus TM300 chromosomal replication initiation protein YP_002635562.1 2564508 R 396513 CDS