-- dump date 20140620_075740 -- class Genbank::CDS -- table cds_note -- id note YP_002633101.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_002633102.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_002633103.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_002633104.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002633105.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_002633106.1 similar to SpoOJ-like homolog,probably involved in regulation of transcription,InterPro: ParB-like partition protein; Hypothetical protein YP_002633107.1 Hypothetical protein YP_002633108.1 Hypothetical protein YP_002633109.1 Hypothetical protein YP_002633110.1 (O31665) Transaminase mtnE (EC 2.6.1.-),InterPro: Aminotransferase class I and II; Hypothetical protein YP_002633111.1 conserved hypothetical protein,InterPro: Putative cyclase; Hypothetical protein YP_002633112.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_002633113.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions YP_002633114.1 Hypothetical protein YP_002633115.1 Hypothetical protein YP_002633116.1 emb|CAG39381.1| putative membrane protein ,InterPro: Mechanosensitive (MS) ion channel; Hypothetical protein YP_002633117.1 Hypothetical protein YP_002633118.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002633119.1 COG1985: Pyrimidine reductase, riboflavin biosynthesis [Desulfitobacterium hafniense]; Hypothetical protein YP_002633120.1 (ref|NP_991886.1| enhancing factor (viral) [Yersinia pestis biovar Medievalis str. 91001],InterPro: Peptidase M60 viral enhancin protein,YSIRK Gram-positive signal peptide,Surface protein from Gram-positive cocci,anchor region; Hypothetical protein YP_002633121.1 oxidoreductase, short-chain dehydrogenase/reductase family [Bacillus cereus ATCC 10987] gb|AAS39853.1| oxidoreductase, short-chain dehydrogenase/reductase family [Bacillus cereus ATCC 10987],InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002633122.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_002633123.1 (P13976) Protein pemK,gi|24195434|gb|AAN48980.1| probable ppGpp-regulated growth inhibitor ChpA/MazF [Leptospira interrogans serovar lai str. 56601],InterPro: PemK-like protein; Hypothetical protein YP_002633124.1 gi|16130690|ref|NP_417263.1| suppressor of inhibitory function of ChpA, PemI-like,autoregulated; part of proteic killer gene system,suppressor of inhibitory function of ChpA [Escherichia coli K12],pfam04014,SpoVT_AbrB, SpoVT / AbrB like domain. One member of this family is AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator or the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the Bacillus subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA binding activity in the Bacillus 0 AbrB homologue requires hexamerisation. Another family member has been isolated from the archaeon Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The E.coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.,only 75% aligned; Hypothetical protein YP_002633125.1 (P00644) Thermonuclease precursor (EC 3.1.31.1) (TNase) (Micrococcal nuclease) (Staphylococcal nuclease),InterPro: Staphylococcus nuclease (SNase-like); Hypothetical protein YP_002633126.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002633127.1 (Q814G6) Single-strand binding protein (SSB) (Helix-destabilizing protein),InterPro: Single-strand binding protein; Hypothetical protein YP_002633128.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002633129.1 Hypothetical protein YP_002633130.1 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source YP_002633131.1 Hypothetical protein YP_002633132.1 Hypothetical protein YP_002633133.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_002633134.1 ydfG; similar to hypothetical proteins,InterPro: Carboxymuconolactone decarboxylase; Hypothetical protein YP_002633135.1 Hypothetical protein YP_002633136.1 b|AAN00897.1| PAP2 family protein [Streptococcus agalactiae 2603V/R],InterPro: PA-phosphatase related phosphoesterase; Hypothetical protein YP_002633137.1 Hypothetical protein YP_002633138.1 (Q99WJ7) Alkyl hydroperoxide reductase subunit F (EC 1.6.4.-),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein YP_002633139.1 (Q8CMQ2) Alkyl hydroperoxide reductase subunit C (EC 1.6.4.-),InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Hypothetical protein YP_002633140.1 (P42270) 2-oxo-hepta-3-ene-17-dioic acid hydratase (EC 4.2.-.-) (OHED hydratase),InterPro: Hydratase/decarboxylase; Hypothetical protein YP_002633141.1 (P39605) Nitro/flavin reductase (EC 1.-.-.-),InterPro: Nitroreductase family; Hypothetical protein YP_002633142.1 Hypothetical protein YP_002633143.1 Hypothetical protein YP_002633144.1 similar to C-terminal part (aa 119..220) of gi|73663636|ref|YP_302417.1| Gene info hypothetical protein SSP2327 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length=221; Hypothetical protein YP_002633145.1 similar to N-terminal part (aa 1..90) of gi|73663636|ref|YP_302417.1| Gene info hypothetical protein SSP2327 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length=221; Hypothetical protein YP_002633146.1 Hypothetical protein YP_002633147.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine YP_002633148.1 (P42086) Xanthine permease ,InterPro: Xanthine/uracil permease family; Hypothetical protein YP_002633149.1 (Q8CMQ7) Inosine-5-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD),InterPro: IMP dehydrogenase/GMP reductase; Hypothetical protein YP_002633150.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002633151.1 (P54721) Hypothetical protein yfiE,PSI BLAST COG: Predicted ring-cleavage extradiol dioxygenase,COG0346,GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism],InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein YP_002633152.1 Hypothetical protein YP_002633153.1 (P32091) MutT-like protein (ORF154),InterPro: NUDIX hydrolase; Hypothetical protein YP_002633154.1 Hypothetical protein YP_002633155.1 (O34319) Putative glycosyl transferase ykcC (EC 2.-.-.-),InterPro: Glycosyl transferase family 2; Hypothetical protein YP_002633156.1 (P39115) Nucleotide binding protein expZ,btk:BT9727_4858 (KEGG) vba; probable MDR-type ABC transporter, ATP-binding protein,InterPro: AAA ATPase; Hypothetical protein YP_002633157.1 (Q8CMX3) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (PAPS reductase thioredoxin dependent) (PAdoPS reductase) (3-phosphoadenylylsulfate reductase) (PAPS sulfotransferase),InterPro: Phosphoadenosine phosphosulfate reductase CysH-type; Hypothetical protein YP_002633158.1 (P38039) Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) (SIR-FP),InterPro: FAD-binding; Hypothetical protein YP_002633159.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide YP_002633160.1 (P11098) Siroheme synthase [Includes: Uroporphyrin-III C-methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM); Precorrin-2 dehydrogenase (EC 1.3.1.76); Sirohydrochlorin ferrochelatase (EC 4.99,InterPro: Uroporphyrin-III C-methyltransferase C-terminal; Hypothetical protein YP_002633161.1 (P46490) Hypothetical protein HI0198,pfam01925,DUF81, Domain of unknown function DUF81. This integral membrane protein family has no known function. The alignment appears to contain two duplicated modules of three transmembrane helices.,InterPro: Protein of unknown function DUF81; Hypothetical protein YP_002633162.1 ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms YP_002633163.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis YP_002633164.1 (Q48436) Acetoin(diacetyl) reductase (EC 1.1.1.5) (Acetoin dehydrogenase) (AR) (Meso-23-butanediol dehydrogenase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002633165.1 gi|49242692|emb|CAG41415.1| hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252]; Hypothetical protein YP_002633166.1 Hypothetical protein YP_002633167.1 Hypothetical protein YP_002633168.1 (P42318) Hypothetical protein yxjG,InterPro: Methionine synthase vitamin-B12 independent; Hypothetical protein YP_002633169.1 (P39044) Hypothetical protein X,InterPro: Transcriptional regulator PadR-like family; Hypothetical protein YP_002633170.1 gi|27468839|ref|NP_765476.1| (REFSEQ) gi|27316387|gb|AAO05562.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228]; Hypothetical protein YP_002633171.1 similarity to N-terminal part (aa 1..111) of gi|27468838|ref|NP_765475.1| hypothetical protein SE1920 [Staphylococcus epidermidis ATCC 12228] Length =267; Hypothetical protein YP_002633172.1 Hypothetical protein YP_002633173.1 (Q9WXE6) Chlorohydroquinone/hydroquinone 12-dioxygenase (EC 1.13.11.-) (Hydroquinone meta-cleavage dioxygenase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein YP_002633174.1 Hypothetical protein YP_002633175.1 (Q01911) Tetracycline resistance protein from transposon Tn4351/Tn4400,InterPro: Flavoprotein monooxygenase; Hypothetical protein YP_002633176.1 Hypothetical protein YP_002633177.1 Hypothetical protein YP_002633178.1 Hypothetical protein YP_002633179.1 similar to gi|38142387|dbj|BAD00991.1| hypothetical protein [Staphylococcus warneri]; Hypothetical protein YP_002633180.1 gi|17989361|ref|NP_541994.1| (REFSEQ) PROTEASE I [Brucella melitensis 16M],InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein YP_002633181.1 (P43984) Hypothetical protein HI0318,InterPro: Isoprenylcysteine carboxyl methyltransferase; Hypothetical protein YP_002633182.1 (Q06174) Carboxylesterase precursor (EC 3.1.1.1),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002633183.1 gi|13309880|gb|AAK18070.1| (GenBank (NCBI Entrez)) IcaR [Staphylococcus caprae],InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein YP_002633184.1 (P45320) Hypothetical sodium-dependent transporter HI1690,InterPro: Sodium:neurotransmitter symporter; Hypothetical protein YP_002633185.1 (P56067) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase),InterPro: Pyridoxal-5-phosphate-dependent enzyme beta family; Hypothetical protein YP_002633186.1 (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS) (O-succinylhomoserine (Thiol)-lyase),InterPro: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; Hypothetical protein YP_002633187.1 Hypothetical protein YP_002633188.1 gi|27314681|gb|AAO03818.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228]; Hypothetical protein YP_002633189.1 (Q99KP3) Lambda-crystallin homolog,InterPro: 3-hydroxyacyl-CoA dehydrogenase NAD binding domain; Hypothetical protein YP_002633190.1 Hypothetical protein YP_002633191.1 (P17446) HTH-type transcriptional regulator betI,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein YP_002633192.1 (O06977) Hypothetical protein yvcN; Belongs to the arylamine N-acetyltransferase family,InterPro: N-acetyltransferase; Hypothetical protein YP_002633193.1 (Q9KQ30) 5-nucleotidase precursor (EC 3.1.3.5),InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002633194.1 putative exported protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49240818|emb|CAG39485.1| putative exported protein [Staphylococcus aureus subsp. aureus MRSA252],InterPro: CHAP; CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of proteins, where is functions as a glutathionylspermidine amidase EC:3.5.1.78.; Hypothetical protein YP_002633195.1 PFAM: Protein of unknown function (DUF1369),InterPro: TPR repeat,No homologs in staphylococcal species; Hypothetical protein YP_002633196.1 InterPro: NUDIX hydrolase; Hypothetical protein YP_002633197.1 No homolog in other staphylococcal species; Hypothetical protein YP_002633198.1 InterPro: Patatin; Hypothetical protein YP_002633199.1 Hypothetical protein YP_002633200.1 Putative membrane protein (TMHMM); Hypothetical protein YP_002633201.1 putative membrane protein; Hypothetical protein YP_002633202.1 putative membrane protein; Hypothetical protein YP_002633203.1 InterPro: LysR substrate binding domain,HTH motif; Hypothetical protein YP_002633204.1 (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13) (NADPH-GOGAT),InterPro: Glutamate synthase amidotransferase domain; Hypothetical protein YP_002633205.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_002633206.1 (Q55595) Probable lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein YP_002633207.1 similar to N-terminal part (aa 1-227) of phosphotransferase system trehalose-specific enzyme IIBC component [Staphylococcus saprophyticus subsp. saprophyticus ATCC (YP_302372): 475 aa,InterPro: Phosphotransferase system PTS EIIB domain; Hypothetical protein YP_002633208.1 similar to C-terminal part (aa 229-474) of phosphotransferase system trehalose-specific enzyme IIBC component [Staphylococcus saprophyticus subsp. saprophyticus ATCC (YP_302372): 475 aa; Hypothetical protein YP_002633209.1 (P39795) Trehalose-6-phosphate hydrolase (EC 3.2.1.93) (Alphaalpha-phosphotrehalase),InterPro: Alpha amylase catalytic domain,Alpha amylase catalytic subdomain; Hypothetical protein YP_002633210.1 (P39796) Trehalose operon transcriptional repressor,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein YP_002633211.1 (P30338) Arsenical resistance operon repressor,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein YP_002633212.1 Hypothetical protein YP_002633213.1 (P37499) Putative HTH-type transcriptional regulator yybE,InterPro: LysR substrate binding domain; Hypothetical protein YP_002633214.1 TMHMM: TMHelix ,InterPro: General substrate transporter; Hypothetical protein YP_002633215.1 Hypothetical protein YP_002633216.1 (P39368) Hypothetical acetyltransferase yjhQ (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633217.1 (P09122) DNA polymerase III subunit gamma/tau (EC 2.7.7.7),InterPro: AAA ATPase central region; Hypothetical protein YP_002633218.1 (P17577) Hypothetical UPF0133 protein ybaB,InterPro: Conserved hypothetical protein 103; Hypothetical protein YP_002633219.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002633220.1 InterPro: Orn/Lys/Arg decarboxylase major region; Hypothetical protein YP_002633221.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_002633222.1 (P37538) Hypothetical protein yaaQ; Hypothetical protein YP_002633223.1 (P37540) DNA polymerase III delta subunit (EC 2.7.7.7),InterPro: Replication factor C conserved domain; Hypothetical protein YP_002633224.1 (P37541) Hypothetical protein yaaT,InterPro: PSP1 C-terminal conserved region; Hypothetical protein YP_002633225.1 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA YP_002633226.1 (P37543) Hypothetical protein yabB,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein YP_002633227.1 (Q9KLK4) Hypothetical UPF0213 protein VCA0739,InterPro: Excinuclease ABC C subunit N-terminal; Hypothetical protein YP_002633228.1 (Q9KGL2) Hypothetical UPF0011 protein BH0049,InterPro: Protein of unknown function UPF0011; Hypothetical protein YP_002633229.1 (P10335) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),InterPro: YSIRK Gram-positive signal peptide,Fragment 1 and 2 (Sca_0132) are similar to N- and C-terminal part of lipase gene gehWC of S. warneri (BAD90561).; Hypothetical protein YP_002633230.1 (Q02510) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),Fragment 1 (Sca_0131) and 2 are similar to N- and C-terminal part of lipase gene gehWC of S. warneri (BAD90561).; Hypothetical protein YP_002633231.1 TMHMM: TM helix; Hypothetical protein YP_002633232.1 Hypothetical protein YP_002633233.1 Hypothetical protein YP_002633234.1 TMHMM: TM helix,According to BlastX comparison,this ORF could be elongated by about 40aa encoded by adjacent frame-shifted ORF.; Hypothetical protein YP_002633235.1 Hypothetical protein YP_002633236.1 (P26946) Hypothetical ABC transporter ATP-binding protein,InterPro: ABC transporter; Hypothetical protein YP_002633237.1 Hypothetical protein YP_002633238.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_002633239.1 (P37545) Putative deoxyribonuclease yabD (EC 3.1.21.-),InterPro: TatD-related deoxyribonuclease; Hypothetical protein YP_002633240.1 (P37547) Hypothetical protein yabF,InterPro: Primase-related protein,contains helix-turn-helix motif; Hypothetical protein YP_002633241.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_002633242.1 (P37466) Veg protein; Hypothetical protein YP_002633243.1 (Q8CQU6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) (CMK) (4-(cytidine-5-diphospho)-2-C-methyl-D-erythritol kinase),InterPro: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Hypothetical protein YP_002633244.1 (P37551) Pur operon repressor,InterPro: Phosphoribosyltransferase; Hypothetical protein YP_002633245.1 (P37552) UPF0076 protein yabJ (purine regulatory protein),InterPro: YjgF-like protein,Interpro: Endoribonuclease L-PSP; Hypothetical protein YP_002633246.1 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus YP_002633247.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis YP_002633248.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_002633249.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002633250.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002633251.1 (P37474) Transcription-repair coupling factor (TRCF),InterPro: Transcription-repair coupling factor; Hypothetical protein YP_002633252.1 (P37555) Hypothetical protein yabM,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein YP_002633253.1 InterPro: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase,InterPro: MazG family protein; Hypothetical protein YP_002633254.1 InterPro: RNA-binding S4; Hypothetical protein YP_002633255.1 (P37557) Hypothetical protein yabO,InterPro: RNA-binding S4; Hypothetical protein YP_002633256.1 (P37471) Cell division protein divIC,InterPro: Septum formation initiator; Hypothetical protein YP_002633257.1 (P37560) Hypothetical protein yabR,InterPro: RNA binding S1; Hypothetical protein YP_002633258.1 (P37563) Hypothetical UPF0072 protein yacA,InterPro: Protein of unknown function UPF0021,Pfam: PP-loop family; Hypothetical protein YP_002633259.1 (Q8CQV4) Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) (HGPRT) (HGPRTase),InterPro: Hypoxanthine phosphoribosyl transferase; Hypothetical protein YP_002633260.1 (P37476) Cell division protein ftsH homolog (EC 3.4.24.-),InterPro: ATP-dependent metalloprotease FtsH; Hypothetical protein YP_002633261.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers YP_002633262.1 (Q8CMT6) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase),InterPro: Cysteine synthase K/M,Cysteine synthase K; Hypothetical protein YP_002633263.1 (Q8NXZ2) Dihydropteroate synthase (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase) (DHPS),InterPro: Dihydropteroate synthase; Hypothetical protein YP_002633264.1 (Q8CMT8) Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA),InterPro: Dihydroneopterin aldolase; Hypothetical protein YP_002633265.1 Hypothetical protein YP_002633266.1 (P37567) Probable tRNA-dihydrouridine synthase 1 (EC 1.-.-.-),InterPro: Putative TIM-barrel protein nifR3; Hypothetical protein YP_002633267.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_002633268.1 (P77389) Hypothetical transport protein ydhP,InterPro: Major facilitator superfamily; Hypothetical protein YP_002633269.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633270.1 (P49309) Probable rhizopine catabolism regulatory protein mocR,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein YP_002633271.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002633272.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate YP_002633273.1 (Q47158) Hypothetical acetyltransferase yafP (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633274.1 Hypothetical protein YP_002633275.1 (O00337) Sodium/nucleoside cotransporter 1 (Na(+)/nucleoside cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Concentrative nucleoside transporter 1) (CNT 1) (hCNT1),InterPro: Na+ dependent nucleoside transporter,TMHMM: TM helix; Hypothetical protein YP_002633276.1 (P37568) Transcriptional regulator ctsR,InterPro: Firmicute transcriptional repressor of class III stress genes,contains helix turn helix motif; Hypothetical protein YP_002633277.1 Hypothetical protein YP_002633278.1 (Q8CTU5) Hypothetical ATP:guanido phosphotransferase SE0286 (EC 2.7.3.-),InterPro: ATP:guanido phosphotransferase; Hypothetical protein YP_002633279.1 (P37571) Negative regulator of genetic competence clpC/mecB,InterPro: AAA ATPase central region; Hypothetical protein YP_002633280.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002633281.1 (Q06754) Hypothetical protein yacL,InterPro: PilT protein N-terminal; Hypothetical protein YP_002633282.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002633283.1 (Q8CTU2) Serine acetyltransferase (EC 2.3.1.30) (SAT),InterPro: Serine O-acetyltransferase; Hypothetical protein YP_002633284.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002633285.1 (Q05370) Hypothetical 16.3 kDa protein in atpI 5region (URF4),InterPro: Uncharacterised conserved protein UCP005520; Hypothetical protein YP_002633286.1 (Q06753) Hypothetical tRNA/rRNA methyltransferase yacO (EC 2.1.1.-),InterPro: RNA methyltransferase TrmH group 3; Hypothetical protein YP_002633287.1 (P37574) Hypothetical protein yacP; Hypothetical protein YP_002633288.1 (P17869) RNA polymerase sigma-H factor (Sigma-30),InterPro: Sigma-70 region 2; Hypothetical protein YP_002633289.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_002633290.1 Hypothetical protein YP_002633291.1 binds directly to 23S ribosomal RNA YP_002633292.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002633293.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_002633294.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002633295.1 (P37872) Hypothetical protein ybxB (P23) (ORF23),InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein YP_002633296.1 Hypothetical protein YP_002633297.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002633298.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_002633299.1 TMHMM: TM helix; Hypothetical protein YP_002633300.1 Hypothetical protein YP_002633301.1 in Bacillus subtilis this non-essential protein associates with the ribosome YP_002633302.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002633303.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002633304.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002633305.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002633306.1 (P37112) N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) (L-aminoacylase),InterPro: Peptidase M20/M25/M40; Hypothetical protein YP_002633307.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_002633308.1 (P54948) Hypothetical protein yxeI,InterPro: Choloylglycine hydrolase; Hypothetical protein YP_002633309.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633310.1 (Q58604) Hypothetical acetyltransferase MJ1207 (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633311.1 (P44094) Hypothetical protein HI1014; Hypothetical protein YP_002633312.1 (O31020) Hypothetical protein VCA0337,InterPro: Protein of unknow function UPF0094; Hypothetical protein YP_002633313.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_002633314.1 (P45808) Hypothetical protein ybaN,InterPro: Protein of unknown function DUF454; Hypothetical protein YP_002633315.1 (Q8DCT7) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGP),InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein YP_002633316.1 Hypothetical protein YP_002633317.1 (P44447) Protein HI0003,InterPro: HAD-superfamily hydrolase subfamily IIB; Hypothetical protein YP_002633318.1 (P37529) Hypothetical protein yaaF,InterPro: Deoxynucleoside kinase; Hypothetical protein YP_002633319.1 (P37530) Hypothetical protein yaaG,InterPro: Deoxynucleoside kinase; Hypothetical protein YP_002633320.1 (P30134) Hypothetical protein yfhC,InterPro: Cytidine/deoxycytidylate deaminase zinc-binding region; Hypothetical protein YP_002633321.1 (P42962) Hypothetical protein ycsE,InterPro: Cof protein; Hypothetical protein YP_002633322.1 (O31038) FMN reductase (EC 1.5.1.29),InterPro: NADPH-dependent FMN reductase; Hypothetical protein YP_002633323.1 (P42404) Hypothetical protein yckF,InterPro: Sugar isomerase (SIS); Hypothetical protein YP_002633324.1 (P39304) Probable hexulose-6-phosphate synthase (EC 4.1.2.-) (HUMPS) (D-arabino 3-hexulose 6-phosphate formaldehyde lyase),InterPro: Orotidine 5-phosphate decarboxylase; Hypothetical protein YP_002633325.1 (Q8R5T0) Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase),InterPro: Glucosamine-6-phosphate isomerase; Hypothetical protein YP_002633326.1 Hypothetical protein YP_002633327.1 (P42981) Hypothetical protein ypjG,InterPro: LmbE-like protein (Although most of the proteins in this group are of unknown function one, from Schizosaccharomyces pombe, has been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.); Hypothetical protein YP_002633328.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_002633329.1 (P30848) Proline/betaine transporter (Proline porter II) (PPII),InterPro: General substrate transporter; Hypothetical protein YP_002633330.1 (Q8CTQ7) Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate kinase) (HMP-P kinase),InterPro: Phosphomethylpyrimidine kinase; Hypothetical protein YP_002633331.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_002633332.1 Hypothetical protein YP_002633333.1 (P45019) Hypothetical protein HI1073,InterPro: Protein of unknown function DUF423; Hypothetical protein YP_002633334.1 (O60170) Probable amino-acid permease meu22 (Meiotic expression up-regulated protein 22),InterPro: Amino acid permease-associated region; Hypothetical protein YP_002633335.1 (Q48630) Alkaline phosphatase like protein,InterPro: DedA family; Hypothetical protein YP_002633336.1 Hypothetical protein YP_002633337.1 (P44520) Hypothetical protein HI0108; Hypothetical protein YP_002633338.1 (P39402) Hypothetical protein yjjP; Hypothetical protein YP_002633339.1 (P39645) Hypothetical protein ywfI,pfam06778,Chlor_dismutase, Chlorite dismutase. This family contains chlorite dismutase enzymes of bacterial and archaeal origin. This enzyme catalyses the disproportionation of chlorite into chloride and oxygen. Note that many family members are hypothetical proteins.; Hypothetical protein YP_002633340.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta YP_002633341.1 (P39648) Hypothetical protein ywfL,InterPro: Biotin/lipoate A/B protein ligase domain; Hypothetical protein YP_002633342.1 (Q9V187) Mevalonate kinase (EC 2.7.1.36) (MK),InterPro: GHMP kinase; Hypothetical protein YP_002633343.1 (Q99JF5) Diphosphomevalonate decarboxylase (EC 4.1.1.33) (Mevalonate pyrophosphate decarboxylase) (Mevalonate (diphospho)decarboxylase),InterPro: Diphosphomevalonate decarboxylase; Hypothetical protein YP_002633344.1 (Q9V187) Mevalonate kinase (EC 2.7.1.36) (MK),InterPro: Gram positive phosphomevalonate kinase; Hypothetical protein YP_002633345.1 Hypothetical protein YP_002633346.1 Hypothetical protein YP_002633347.1 (P43340) Putative NAD(P)H oxidoreductase ycaK (EC 1.6.99.-); Hypothetical protein YP_002633348.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633349.1 (P39651) Hypothetical protein ywfO,InterPro: Metal-dependent phosphohydrolase HD region; Hypothetical protein YP_002633350.1 Hypothetical protein YP_002633351.1 (P70775) Hypothetical protein yggA,InterPro: Lysine exporter protein (LYSE/YGGA); Hypothetical protein YP_002633352.1 (P77730) Hypothetical protein ydcR,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein YP_002633353.1 (Q9Z4V7) Hypothetical protein SCO2235 (ORFU1E),InterPro: Protein of unknown function DUF172; Hypothetical protein YP_002633354.1 (P56605) Hypothetical protein yoeB; Hypothetical protein YP_002633355.1 (P54970) IAA-amino acid hydrolase homolog 2 precursor,InterPro: Peptidase M20/M25/M40; Hypothetical protein YP_002633356.1 Hypothetical protein YP_002633357.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_002633358.1 (Q8ZRP7) Vitamin B12 transport protein btuF precursor,InterPro: Periplasmic binding protein; Hypothetical protein YP_002633359.1 (Q57552) Putative ABC transporter permease protein MJ0087,InterPro: FecCD transport family; Hypothetical protein YP_002633360.1 (Q9V1B3) Putative HAD-hydrolase PYRAB05140 (EC 3.-.-.-),InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein YP_002633361.1 (P47229) 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate hydrolase (EC 3.7.1.-),InterPro: Alpha/beta hydrolase fold; Hypothetical protein YP_002633362.1 Hypothetical protein YP_002633363.1 Hypothetical protein YP_002633364.1 (P35861) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2); Hypothetical protein YP_002633365.1 Hypothetical protein YP_002633366.1 InterPro: Protein of unknown function DUF606; Hypothetical protein YP_002633367.1 Hypothetical protein YP_002633368.1 Hypothetical protein YP_002633369.1 Hypothetical protein YP_002633370.1 (P32703) Putative Na(+)/H(+) exchanger yjcE,InterPro: Sodium/hydrogen exchanger; Hypothetical protein YP_002633371.1 (Q8Y653) Manganese-binding lipoprotein mntA precursor,InterPro: Periplasmic solute binding protein; Hypothetical protein YP_002633372.1 (Q92AG0) Manganese transport system membrane protein mntC,InterPro: ABC transporter family 3; Hypothetical protein YP_002633373.1 (P96117) Zinc transport system ATP-binding protein troB,InterPro: ABC transporter; Hypothetical protein YP_002633374.1 (Q92AD1) Transcriptional regulator mntR (Manganese transport regulator),InterPro: Iron dependent repressor; Hypothetical protein YP_002633375.1 (P35575) Glucose-6-phosphatase (EC 3.1.3.9) (G6Pase) (G-6-Pase),InterPro: PA-phosphatase related phosphoesterase; Hypothetical protein YP_002633376.1 (P76112) Hypothetical acetyltransferase yncA (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633377.1 Hypothetical protein YP_002633378.1 (P37515) Probable maltose O-acetyltransferase (EC 2.3.1.79) (Maltose transacetylase),InterPro: Bacterial transferase hexapeptide repeat; Hypothetical protein YP_002633379.1 (Q7MYM6) Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) (UDP-ManNAcA transferase),InterPro: Glycosyl transferase WecB/TagA/CpsF family; Hypothetical protein YP_002633380.1 (P18256) Threonyl-tRNA synthetase 2 (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS),InterPro: Threonyl-tRNA synthetase class IIa; Hypothetical protein YP_002633381.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate YP_002633382.1 (P37520) Hypothetical protein yyaD; Hypothetical protein YP_002633383.1 (O05398) Hypothetical protein yrhF; Hypothetical protein YP_002633384.1 with TagG is involved in the export of teichoic acids YP_002633385.1 (P42953) Teichoic acid translocation permease protein tagG,InterPro: ABC transporter family 2; Hypothetical protein YP_002633386.1 (Q8RKI8) Putative CDP-glycerol:glycerophosphate glycerophosphotransferase tarB (EC 2.7.8.-),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein YP_002633387.1 (Q48214) Putative glycosyl transferase HI1696 (EC 2.-.-.-),InterPro: Glycosyl transferase family 2; Hypothetical protein YP_002633388.1 (P27623) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D),InterPro: Cytidylyltransferase; Hypothetical protein YP_002633389.1 (Q05523) D-alanyl-D-alanine carboxypeptidase precursor (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase) (CPase) (PBP5),InterPro: Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Hypothetical protein YP_002633390.1 (P97046) Multidrug resistance ABC transporter ATP-binding and permease protein,InterPro: ABC transporter transmembrane region; Hypothetical protein YP_002633391.1 (O00337) Sodium/nucleoside cotransporter 1 (Na(+)/nucleoside cotransporter 1) (Sodium-coupled nucleoside transporter 1) (Concentrative nucleoside transporter 1) (CNT 1) (hCNT1),InterPro: Na+ dependent nucleoside transporter; Hypothetical protein YP_002633392.1 (P39803) Hypothetical protein yitT,InterPro: Protein of unknown function DUF161; Hypothetical protein YP_002633393.1 (P49938) Ferrichrome transport ATP-binding protein fhuC,InterPro: ABC transporter; Hypothetical protein YP_002633394.1 (P49936) Ferrichrome transport system permease protein fhuB,InterPro: FecCD transport family; Hypothetical protein YP_002633395.1 (P49937) Ferrichrome transport system permease protein fhuG,InterPro: FecCD transport family; Hypothetical protein YP_002633396.1 Hypothetical protein YP_002633397.1 (P37520) Hypothetical protein yyaD; Hypothetical protein YP_002633398.1 (P23872) Acetyl esterase (EC 3.1.1.-),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002633399.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633400.1 (O34951) Sensory transduction protein bceR,InterPro: Response regulator receiver; Hypothetical protein YP_002633401.1 (Q9K620) Sensor protein bceS (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002633402.1 (Q9K619) Bacitracin export ATP-binding protein bceA,InterPro: ABC transporter; Hypothetical protein YP_002633403.1 (O34741) Bacitracin export permease protein bceB,InterPro: Protein of unknown function DUF214; Hypothetical protein YP_002633404.1 (O34454) Hypothetical UPF0111 protein ykaA,InterPro: Protein of unknown function DUF47; Hypothetical protein YP_002633405.1 (O34436) Probable low-affinity inorganic phosphate transporter,InterPro: Phosphate transporter; Hypothetical protein YP_002633406.1 (Q46857) 25-diketo-D-gluconic acid reductase A (EC 1.1.1.274) (25-DKG reductase A) (25-DKGR A) (25DKGR-A) (AKR5C),InterPro: Aldo/keto reductase; Hypothetical protein YP_002633407.1 (P77389) Hypothetical transport protein ydhP,InterPro: General substrate transporter; Hypothetical protein YP_002633408.1 (O34533) Hypothetical UPF0087 protein ytcD,InterPro: Protein of unknown function DUF24; Hypothetical protein YP_002633409.1 (P39046) Muramidase-2 precursor (EC 3.2.1.17) (14-beta-N-acetylmuramoylhydrolase) (Peptidoglycan hydrolase) (Pg-hydrolase-2) (Lysozyme),InterPro: CHAP; Hypothetical protein YP_002633410.1 Hypothetical protein YP_002633411.1 InterPro: Helix-turn-helix AraC type,This fragment is N-terminally truncated by about 60 aa which are encoded in preceding ORF (not annotated); Hypothetical protein YP_002633412.1 Hypothetical protein YP_002633413.1 Hypothetical protein YP_002633414.1 Hypothetical protein YP_002633415.1 (Q8CTK9) Hypothetical UPF0082 protein SE0437,InterPro: Protein of unknown function DUF28; Hypothetical protein YP_002633416.1 Hypothetical protein YP_002633417.1 InterPro: Protein of unknown function DUF402; Hypothetical protein YP_002633418.1 (O34827) Putative HTH-type transcriptional regulator ykuM,InterPro: LysR substrate binding domain; Hypothetical protein YP_002633419.1 (P31436) Sugar efflux transporter C,InterPro: Major facilitator superfamily; Hypothetical protein YP_002633420.1 (P54486) Hypothetical protein yqgC,InterPro: Protein of unknown function DUF456; Hypothetical protein YP_002633421.1 (P40350) Dolichyl-phosphate beta-glucosyltransferase (EC 2.4.1.117) (DolP-glucosyltransferase); Hypothetical protein YP_002633422.1 Hypothetical protein YP_002633423.1 Hypothetical protein YP_002633424.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633425.1 (P48636) Hypothetical protein PA4923,InterPro: Conserved hypothetical protein 730; Hypothetical protein YP_002633426.1 (Q8CTJ9) Hypothetical UPF0178 protein SE0451,InterPro: Protein of unknown function DUF188; Hypothetical protein YP_002633427.1 Hypothetical protein YP_002633428.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_002633429.1 (P29018) Transport ATP-binding protein cydD,InterPro: ABC transporter transmembrane region; Hypothetical protein YP_002633430.1 (P23886) Transport ATP-binding protein cydC,InterPro: ABC transporter transmembrane region; Hypothetical protein YP_002633431.1 (O34777) Organic hydroperoxide resistance transcriptional regulator,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002633432.1 (P31521) 47 kDa protein (P47K),InterPro: Cobalamin synthesis protein/P47K; Hypothetical protein YP_002633433.1 (P42972) Hypothetical oxidoreductase ycsN (EC 1.-.-.-),InterPro: Aldo/keto reductase; Hypothetical protein YP_002633434.1 (P45403) Cytochrome c-type biogenesis protein cycK; Hypothetical protein YP_002633435.1 (Q9CHL6) Alkaline phosphatase like protein,InterPro: DedA family; Hypothetical protein YP_002633436.1 Catalyzes the reversible oxidation of malate to oxaloacetate YP_002633437.1 (Q07252) Membrane protein,InterPro: Sodium/sulphate symporter; Hypothetical protein YP_002633438.1 Hypothetical protein YP_002633439.1 (P21191) Quinolone resistance protein norA,InterPro: General substrate transporter; Hypothetical protein YP_002633440.1 (Q8Z992) D-methionine-binding lipoprotein metQ precursor,InterPro: NLPA lipoprotein; Hypothetical protein YP_002633441.1 (P14561) L-lactate dehydrogenase P (EC 1.1.1.27) (L-LDH P),InterPro: Lactate/malate dehydrogenase; Hypothetical protein YP_002633442.1 Hypothetical protein YP_002633443.1 (P37174) Protein ybaK,InterPro: YbaK/prolyl-tRNA synthetase associated region; Hypothetical protein YP_002633444.1 (P16644) Lactose phosphotransferase system repressor,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein YP_002633445.1 (O31714) 1-phosphofructokinase (EC 2.7.1.56) (Fructose 1-phosphate kinase),InterPro: Carbohydrate kinase PfkB; Hypothetical protein YP_002633446.1 (P20966) PTS system fructose-specific IIBC component (EIIBC-Fru) (Fructose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Fru),InterPro: PTS fructose IIC component; Hypothetical protein YP_002633447.1 (O07585) Hypothetical UPF0053 protein yhdP,InterPro: CBS; Hypothetical protein YP_002633448.1 Hypothetical protein YP_002633449.1 Hypothetical protein YP_002633450.1 (P39663) Alkaline phosphatase synthesis transcriptional regulatory protein sphR,InterPro: Response regulator receiver,Similar to N-terminal part (aa 1-178) of saeR protein [Staphylococcus aureus] (CAD89114): 228 aa; Hypothetical protein YP_002633451.1 Similar to C-terminal part (aa 179-228) of saeR protein [Staphylococcus aureus](CAD89114): 228 aa; Hypothetical protein YP_002633452.1 (Q93CB7) Sensor histidine kinase mtrB (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002633453.1 involved in peptidoglycan cross-linking YP_002633454.1 (Q8XBT6) 25-diketo-D-gluconic acid reductase A (EC 1.1.1.274) (25-DKG reductase A) (25-DKGR A) (25DKGR-A) (AKR5C),InterPro: Aldo/keto reductase; Hypothetical protein YP_002633455.1 InterPro: Transglycosylase-associated protein; Hypothetical protein YP_002633456.1 Hypothetical protein YP_002633457.1 Hypothetical protein YP_002633458.1 (Q46903) Putative 6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase),InterPro: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; Hypothetical protein YP_002633459.1 (P77756) Hypothetical protein ybaX,InterPro: ExsB; Hypothetical protein YP_002633460.1 (P06193) Para-aminobenzoate synthase glutamine amidotransferase component II (EC 6.3.5.8) (ADC synthase),InterPro: Glutamine amidotransferase of anthranilate synthase; Hypothetical protein YP_002633461.1 (P32483) Para-aminobenzoate synthase (EC 6.3.5.8) (P-aminobenzoic acid synthase) (PABA synthase),InterPro: Anthranilate synthase component I and chorismate binding protein; Hypothetical protein YP_002633462.1 Hypothetical protein YP_002633463.1 (P60495) Kinase A inhibitor (Sporulation inhibitor kipI),InterPro: Protein of unknown function DUF213; Hypothetical protein YP_002633464.1 (P75745) Hypothetical protein ybgK,InterPro: Urea amidolyase-related; Hypothetical protein YP_002633465.1 (P54496) Hypothetical protein yqgS,InterPro: Sulfatase; Hypothetical protein YP_002633466.1 (P43672) ABC transporter ATP-binding protein uup,InterPro: ABC transporter; Hypothetical protein YP_002633467.1 (P15043) ATP-dependent DNA helicase recQ (EC 3.6.1.-),InterPro: ATP-requiring DNA helicase RecQ; Hypothetical protein YP_002633468.1 (Q45460) Choline transport ATP-binding protein opuBA,InterPro: ABC transporter; Hypothetical protein YP_002633469.1 (Q45462) Choline-binding protein precursor,InterPro: Substrate-binding region of ABC-type glycine betaine transport system; Hypothetical protein YP_002633470.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_002633471.1 (Q99VP8) Putative 5(3)-deoxyribonucleotidase (EC 3.1.3.-); Hypothetical protein YP_002633472.1 (Q99VP8) Putative 5(3)-deoxyribonucleotidase (EC 3.1.3.-); Hypothetical protein YP_002633473.1 (P94408) Hypothetical transporter yclF,InterPro: Amino acid/peptide transporter; Hypothetical protein YP_002633474.1 (P94408) Hypothetical transporter yclF,InterPro: Amino acid/peptide transporter; Hypothetical protein YP_002633475.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_002633476.1 (Q07835) Hypothetical transport protein yxxF,InterPro: Protein of unknown function DUF6; Hypothetical protein YP_002633477.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF YP_002633478.1 Catalyzes the rate-limiting step in dNTP synthesis YP_002633479.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE YP_002633480.1 (P37738) Ferric anguibactin transport system permease protein fatD,InterPro: FecCD transport family; Hypothetical protein YP_002633481.1 (P37737) Ferric anguibactin transport system permease protein fatC,InterPro: FecCD transport family; Hypothetical protein YP_002633482.1 (P49938) Ferrichrome transport ATP-binding protein fhuC,InterPro: ABC transporter; Hypothetical protein YP_002633483.1 (P11460) Ferric anguibactin-binding protein precursor,InterPro: Periplasmic binding protein; Hypothetical protein YP_002633484.1 (P36078) Hypothetical 13.6 kDa protein in MDH1-VMA5 intergenic region,InterPro: CHY zinc finger; Hypothetical protein YP_002633485.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_002633486.1 (Q45133) Glutamate-rich protein grpB,InterPro: Protein of unknown function UPF0157; Hypothetical protein YP_002633487.1 (P15801) DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit); Hypothetical protein YP_002633488.1 (P39914) Hypothetical protein ytxJ (ORF2) (ORF3); Hypothetical protein YP_002633489.1 (P44507) Glycerate kinase (EC 2.7.1.31),InterPro: Conserved hypothetical protein 45; Hypothetical protein YP_002633490.1 catalyzes the release of the N-terminal amino acid from a tripeptide YP_002633491.1 (P44520) Hypothetical protein HI0108; Hypothetical protein YP_002633492.1 (P39402) Hypothetical protein yjjP; Hypothetical protein YP_002633493.1 (P54595) Hypothetical protein yhcK,InterPro: GGDEF; Hypothetical protein YP_002633494.1 (O34753) Probable undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) (UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase),InterPro: Glycosyl transferase family 4; Hypothetical protein YP_002633495.1 (P32437) Hypothetical UPF0029 protein yvyE,InterPro: Protein of unknown function UPF0029; Hypothetical protein YP_002633496.1 (Q927X9) Hypothetical UPF0230 protein lin2658,InterPro: DegV; Hypothetical protein YP_002633497.1 (P39145) ComF operon protein,InterPro: DEAD/DEAH box helicase; Hypothetical protein YP_002633498.1 (P39147) ComF operon protein; Hypothetical protein YP_002633499.1 (P47995) Hypothetical protein in secA 5region (ORF1) (Fragment),InterPro: Sigma 54 modulation protein/ribosomal protein S30EA,In comparison to published sequence P47995 Hypothetical protein in SECA 5'region (ORF1) of S. carnosus, the gene starts further upstream.; Hypothetical protein YP_002633500.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_002633502.1 (P28367) Peptide chain release factor 2 (RF-2),InterPro: Peptide chain release factor 2,Probably fused to preceding ORF (prfB') by translational frameshift. According to sequence similarity, the fusion will start with codon at position 413405..413407.; Hypothetical protein YP_002633503.1 (Q37896) Lysozyme (EC 3.2.1.17) (Lysis protein) (Muramidase) (Endolysin) (Morphogenesis protein 2),InterPro: CHAP; LysM; Hypothetical protein YP_002633504.1 InterPro: Metal-dependent phosphohydrolase HD subdomain; Hypothetical protein YP_002633505.1 (P37953) CsbA protein; Hypothetical protein YP_002633506.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_002633507.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate YP_002633508.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_002633509.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_002633510.1 (P77558) Putative colanic acid biosynthesis acetyltransferase wcaB (EC 2.3.1.-),InterPro: Bacterial transferase hexapeptide repeat; Hypothetical protein YP_002633511.1 InterPro: TPR repeat; Hypothetical protein YP_002633512.1 (Q99VL2) Thioredoxin reductase (EC 1.8.1.9) (TRXR),InterPro: Thioredoxin reductase; Hypothetical protein YP_002633513.1 (Q8CTE3) Hypothetical UPF0042 protein SE0548,InterPro: Uncharacterised P-loop ATPase protein family UPF0042; Hypothetical protein YP_002633514.1 (Q9K706) Hypothetical UPF0052 protein BH3568,InterPro: Protein of unknown function UPF0052; Hypothetical protein YP_002633515.1 InterPro: Protein of unknown function DUF199; Hypothetical protein YP_002633516.1 (P43531) Hypothetical transport protein ynfM,InterPro: Major facilitator superfamily; Hypothetical protein YP_002633517.1 (P19072) Branched chain amino acid transport system II carrier protein (LIV-II),InterPro: Branched-chain amino acid transport system II carrier protein; Hypothetical protein YP_002633518.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_002633519.1 (O31574) Hypothetical UPF0105 protein yfhF; Hypothetical protein YP_002633520.1 Hypothetical protein YP_002633521.1 Hypothetical protein YP_002633522.1 (P35168) Central glycolytic genes regulator,InterPro: Putative sugar-binding domain; Hypothetical protein YP_002633523.1 Hypothetical protein YP_002633524.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_002633525.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002633526.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002633527.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002633528.1 Hypothetical protein YP_002633529.1 (O32233) Probable protein-export membrane protein secG,InterPro: Preprotein translocase SecG subunit; Hypothetical protein YP_002633530.1 (Q06174) Carboxylesterase precursor (EC 3.1.1.1),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002633531.1 (O32231) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein homolog),InterPro: VacB and RNase II family 3-5 exoribonuclease; Hypothetical protein YP_002633532.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002633533.1 (O05220) Hypothetical protein ywrF; Hypothetical protein YP_002633534.1 InterPro: Glycosyl hydrolase BNR repeat; Hypothetical protein YP_002633535.1 these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation YP_002633536.1 (Q54974) Major cold-shock protein,InterPro: Cold-shock DNA-binding domain; Hypothetical protein YP_002633537.1 Hypothetical protein YP_002633538.1 Hypothetical protein YP_002633539.1 Hypothetical protein YP_002633540.1 (P43440) V-type sodium ATP synthase subunit J (EC 3.6.3.14) (Na(+)-translocating ATPase subunit J),InterPro: Cation transporter; Hypothetical protein YP_002633541.1 (P43054) Hypothetical 25.5 kDa protein in gyrB 5region (ORF219),InterPro: LemA family; Hypothetical protein YP_002633542.1 (P55140) Hypothetical protein ygcG,InterPro: Protein of unknown function DUF477; Hypothetical protein YP_002633543.1 Hypothetical protein YP_002633544.1 Hypothetical protein YP_002633545.1 (Q10845) Hypothetical protein Rv2012/MT2067/Mb2035; Hypothetical protein YP_002633546.1 Hypothetical protein YP_002633547.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis YP_002633548.1 InterPro: Nitroreductase family; Hypothetical protein YP_002633549.1 (P22217) Thioredoxin II (TR-II),InterPro: Thioredoxin type domain; Hypothetical protein YP_002633550.1 (O32175) Hypothetical protein yusI,InterPro: Conserved hypothetical protein ArsC related; Hypothetical protein YP_002633551.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_002633552.1 InterPro: TOPRIM; Hypothetical protein YP_002633553.1 (P46843) Bifunctional thioredoxin reductase/thioredoxin [Includes: Thioredoxin reductase (EC 1.8.1.9) (TRXR); Thioredoxin],InterPro: Thioredoxin domain 2; Hypothetical protein YP_002633554.1 (P30750) D-methionine transport ATP-binding protein metN,InterPro: ABC transporter; Hypothetical protein YP_002633555.1 (P46492) Probable D-methionine transport system permease protein metI,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002633556.1 (Q8ZH40) D-methionine-binding lipoprotein metQ precursor,InterPro: NLPA lipoprotein; Hypothetical protein YP_002633557.1 (P80866) Vegetative protein 296 (VEG296),InterPro: ABC transporter; Hypothetical protein YP_002633558.1 (O50093) Hypothetical UPF0051 protein PH1385,InterPro: Protein of unknown function UPF0051; Hypothetical protein YP_002633559.1 (Q99VG1) Probable cysteine desulfurase (EC 2.8.1.7),InterPro: Aminotransferase class V; Hypothetical protein YP_002633560.1 Hypothetical protein YP_002633561.1 (Q55790) Hypothetical UPF0051 protein slr0074,InterPro: Protein of unknown function UPF0051; Hypothetical protein YP_002633562.1 (Q9CI63) Prophage ps2 probable integrase (Int-TnX),InterPro: Phage integrase,Sca-Prophage; Hypothetical protein YP_002633563.1 Hypothetical protein YP_002633564.1 Sca-Prophage,reporting helix-turn-helix motif; Hypothetical protein YP_002633565.1 (O85264) Cryptic phage CTXphi transcriptional repressor rstR,InterPro: Helix-turn-helix motif,Sca-Prophage; Hypothetical protein YP_002633566.1 InterPro: BRO family N-terminal,Sca-prophage; Hypothetical protein YP_002633567.1 Sca-prophage; Hypothetical protein YP_002633568.1 Sca-prophage; Hypothetical protein YP_002633569.1 Sca-prophage; Hypothetical protein YP_002633570.1 Reporting helix-turn-helix motif,Sca-prophage; Hypothetical protein YP_002633571.1 Sca-prophage; Hypothetical protein YP_002633572.1 Sca-prophage; Hypothetical protein YP_002633573.1 Sca-prophage,InterPro: ERF,putatively involved in single-strand annealing; Hypothetical protein YP_002633574.1 (Q932A8) Single-strand binding protein 1 (SSB 1) (Helix-destabilizing protein 1),InterPro: Single-strand binding protein,Sca-prophage; Hypothetical protein YP_002633575.1 InterPro: HNH endonuclease,Sca-prophage; Hypothetical protein YP_002633576.1 Sca-prophage; Hypothetical protein YP_002633577.1 Sca-prophage; Hypothetical protein YP_002633578.1 (Q89B30) DNA replication protein dnaC,InterPro: IstB-like ATP-binding protein,Sca-prophage; Hypothetical protein YP_002633579.1 (P45911) Hypothetical protein yqaN,InterPro: Endodeoxyribonuclease RusA,Sca-prophage; Hypothetical protein YP_002633580.1 Sca-prophage; Hypothetical protein YP_002633581.1 Sca-prophage; Hypothetical protein YP_002633582.1 Sca-prophage; Hypothetical protein YP_002633583.1 (Q9PR82) Hypothetical protein UU063; Hypothetical protein YP_002633584.1 Sca-prophage; Hypothetical protein YP_002633585.1 (P33316) Deoxyuridine 5-triphosphate nucleotidohydrolase mitochondrial precursor (EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase),InterPro: DeoxyUTP pyrophosphatase subfamily 1; Hypothetical protein YP_002633586.1 Sca-Prophage; Hypothetical protein YP_002633587.1 Sca-Prophage; Hypothetical protein YP_002633588.1 Sca-Prophage; Hypothetical protein YP_002633589.1 Sca-Prophage; Hypothetical protein YP_002633590.1 Sca-Prophage,Probably truncated; Hypothetical protein YP_002633591.1 Sca-Prophage; Hypothetical protein YP_002633592.1 (P59217) Putative terminase large subunit,InterPro: Phage Terminase,Sca-Prophage; Hypothetical protein YP_002633593.1 InterPro: Phage portal protein,Sca-Prophage; Hypothetical protein YP_002633594.1 (P56317) ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp),InterPro: Clp protease,Sca-Prophage; Hypothetical protein YP_002633595.1 Sca-Prophage; Hypothetical protein YP_002633596.1 Sca-Prophage; Hypothetical protein YP_002633597.1 Sca-Prophage; Hypothetical protein YP_002633598.1 Hypothetical protein YP_002633599.1 Sca-Prophage; Hypothetical protein YP_002633600.1 Hypothetical protein YP_002633601.1 InterPro: Bacterial Ig-like group 2,Sca-Prophage; Hypothetical protein YP_002633602.1 Hypothetical protein YP_002633603.1 >sas:SAS0943,Length = 52,Score = 42.4 bits (98),Expect = 0.001,Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%),But no detectable SD sequence!; Hypothetical protein YP_002633604.1 Sca-Prophage,Similar to aminoterminal part of phiSLT ORF2067; Hypothetical protein YP_002633605.1 Sca-Prophage,Similar to carboxyterminal part of phiSLT ORF2067,InterPro: SLT domain; Hypothetical protein YP_002633606.1 Sca-Prophage; Hypothetical protein YP_002633607.1 Sca-Prophage; Hypothetical protein YP_002633608.1 Sca-Prophage; Hypothetical protein YP_002633609.1 (P28296) Oryzin precursor (EC 3.4.21.63) (Alkaline proteinase) (ALP) (Elastase) (Elastinolytic serine proteinase),InterPro: Parallel beta-helix repeat; Hypothetical protein YP_002633610.1 Sca-Prophage; Hypothetical protein YP_002633611.1 Sca-Prophage; Hypothetical protein YP_002633612.1 Sca-Prophage; Hypothetical protein YP_002633613.1 Hypothetical protein YP_002633614.1 Sca-Prophage; Hypothetical protein YP_002633615.1 Sca-Prophage; Hypothetical protein YP_002633616.1 (Q99165) Hypothetical 9.5 kDa protein in ORF3 5region,InterPro: Holin SPP1,Sca-Prophage; Hypothetical protein YP_002633617.1 (P54525) Hypothetical protein yqiI,InterPro: CHAP,Sca-Prophage; Hypothetical protein YP_002633618.1 Sca-Prophage; Hypothetical protein YP_002633619.1 Hypothetical protein YP_002633620.1 (P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase,Sca-Prophage; Hypothetical protein YP_002633621.1 Hypothetical protein YP_002633622.1 (P74409) Hypothetical UPF0053 protein sll0260,InterPro: CBS,Truncation of 20 amino acids at N-terminus; Hypothetical protein YP_002633623.1 (Q12723) 2-nitropropane dioxygenase (EC 1.13.11.32) (Nitroalkane oxidase) (2-NPD),InterPro: 2-nitropropane dioxygenase NPD; Hypothetical protein YP_002633624.1 InterPro: Protein of unknown function DUF72; Hypothetical protein YP_002633625.1 (P54437) Hypothetical protein yrkJ,InterPro: Protein of unknown function DUF81; Hypothetical protein YP_002633626.1 (P54602) Hypothetical protein yhcR precursor,InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002633627.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002633628.1 Hypothetical protein YP_002633629.1 Hypothetical protein YP_002633630.1 InterPro: Protein of unknown function DUF86; Hypothetical protein YP_002633631.1 (P15302) NagD protein,InterPro: HAD-superfamily subfamily IIA hydrolase hypothetical 1; Hypothetical protein YP_002633632.1 (Q8U3Y2) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein YP_002633633.1 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid YP_002633634.1 (P35855) Protein dltB (Basic membrane protein) (BMP),InterPro: Membrane bound O-acyl transferase MBOAT; Hypothetical protein YP_002633635.1 D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid YP_002633636.1 (P39578) Protein dltD precursor,InterPro: DltD central region; Hypothetical protein YP_002633637.1 (P05425) Probable copper exporting ATPase B (EC 3.6.3.4),InterPro: Copper-translocating P-type ATPase; Hypothetical protein YP_002633638.1 (P32184) HTH-type transcriptional activator tipA,InterPro: Bacterial regulatory protein MerR family; Hypothetical protein YP_002633639.1 (Q43909) Nitrogen fixation protein nifU,InterPro: Nitrogen-fixing NifU C-terminal; Hypothetical protein YP_002633640.1 Hypothetical protein YP_002633641.1 (P09163) Hypothetical acetyltransferase yjaB (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633642.1 (P80861) NADH dehydrogenase-like protein yjlD (EC 1.6.99.-) (Glucose starvation-inducible protein 5) (GSI5),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein YP_002633643.1 Hypothetical protein YP_002633644.1 (O32113) Hypothetical protein yutM,InterPro: Protein of unknown function HesB/YadR/YfhF; Hypothetical protein YP_002633645.1 (P80861) NADH dehydrogenase-like protein yjlD (EC 1.6.99.-) (Glucose starvation-inducible protein 5) (GSI5),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein YP_002633646.1 (O32106) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase),InterPro: Peptidase M17 cytosol aminopeptidase C-terminal; Hypothetical protein YP_002633647.1 (P46231) Hypothetical protein VP2115 (ORF3),InterPro: Na+/H+ antiporter NhaC; Hypothetical protein YP_002633648.1 (P14205) ComA operon protein,InterPro: Phenylacetic acid degradation-related protein; Hypothetical protein YP_002633649.1 Hypothetical protein YP_002633650.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002633651.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002633652.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002633653.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone YP_002633654.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002633655.1 (Q52978) Probable K(+)/H(+) antiporter subunit A/B (pH adaptation potassium efflux system protein A/B) (Pha system subunit A/B),InterPro: Na+/H+ antiporter MnhB subunit-related protein; Hypothetical protein YP_002633656.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002633657.1 (Q08429) Kinase-associated lipoprotein B precursor; Hypothetical protein YP_002633658.1 (P52017) Peptidyl-prolyl cis-trans isomerase 10 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-10),InterPro: Peptidyl-prolyl cis-trans isomerase cyclophilin type; Hypothetical protein YP_002633659.1 (O05234) Hypothetical protein yugE; Hypothetical protein YP_002633660.1 (Q8Y9Z9) Putative Nudix hydrolase lmo0368 (EC 3.6.-.-),InterPro: NUDIX hydrolase; Hypothetical protein YP_002633661.1 (P80870) General stress protein 13 (GSP13),InterPro: RNA binding S1; Hypothetical protein YP_002633662.1 (P54524) Probable NADH-dependent flavin oxidoreductase yqiG (EC 1.-.-.-),InterPro: NADH:flavin oxidoreductase/NADH oxidase; Hypothetical protein YP_002633663.1 (Q9K9B2) 1-pyrroline-5-carboxylate dehydrogenase 1 (EC 1.5.1.12) (P5C dehydrogenase 1),InterPro: delta-1-pyrroline-5-carboxylate dehydrogenase 2; Hypothetical protein YP_002633664.1 (P60297) Acetylornithine aminotransferase 2 (EC 2.6.1.11) (ACOAT 2),InterPro: Aminotransferase class-III; Hypothetical protein YP_002633665.1 (P50735) NAD-specific glutamate dehydrogenase (EC 1.4.1.2) (NAD-GDH),InterPro: Glu/Leu/Phe/Val dehydrogenase C terminal; Hypothetical protein YP_002633666.1 (Q8R5M5) 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45),InterPro: Amidohydrolase 2; Hypothetical protein YP_002633667.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_002633668.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002633669.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_002633670.1 (P76219) Hypothetical UPF0043 protein ydjX,Orf1; similar to Bacillus subtilis yhjE,Due to manual inspection of SD sequence, start codon at position 39 of published sequence ( AAD09009 ) was chosen.; Hypothetical protein YP_002633672.1 (P72365) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader peptidase IB),InterPro: Signal peptidase; Hypothetical protein YP_002633673.1 (P23477) ATP-dependent nuclease subunit B; Hypothetical protein YP_002633674.1 (P23478) ATP-dependent nuclease subunit A,InterPro: UvrD/REP helicase; Hypothetical protein YP_002633675.1 (O28058) Hypothetical protein AF2225,InterPro: Fumarylacetoacetate (FAA) hydrolase,reporting helix-turn-helix motif; Hypothetical protein YP_002633676.1 Hypothetical protein YP_002633677.1 NADPH-dependent; catalyzes the reduction of coenzyme A disulfide YP_002633678.1 (P43051) Hypothetical 31.6 kDa protein in UPP 3region,InterPro: Cof protein; Hypothetical protein YP_002633679.1 (P53383) Mrp protein homolog,InterPro: Protein of unknown function DUF59; Hypothetical protein YP_002633680.1 (P43993) Hypothetical protein HI0392,InterPro: Acyltransferase 3 family; Hypothetical protein YP_002633681.1 (P74361) ClpB protein,InterPro: AAA ATPase central region; Hypothetical protein YP_002633682.1 Hypothetical protein YP_002633683.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_002633684.1 (P73283) 3-oxoacyl-[acyl-carrier-protein] synthase II (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase II) (KAS II),InterPro: Beta-ketoacyl synthase; Hypothetical protein YP_002633685.1 (P31126) Hypothetical protein ydeE,InterPro: Major facilitator superfamily; Hypothetical protein YP_002633686.1 Hypothetical protein YP_002633687.1 (P24138) Oligopeptide transport system permease protein oppB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002633688.1 (P24139) Oligopeptide transport system permease protein oppC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002633689.1 (P24136) Oligopeptide transport ATP-binding protein oppD,InterPro: ABC transporter; Hypothetical protein YP_002633690.1 (P24137) Oligopeptide transport ATP-binding protein oppF,InterPro: ABC transporter,Reveals a N-terminal extension of about 35 aa when compared to homologs in databases; Hypothetical protein YP_002633691.1 (P26906) Dipeptide-binding protein dppE precursor,InterPro: Bacterial extracellular solute-binding protein family 5; Hypothetical protein YP_002633692.1 (O32254) Hypothetical protein yvbT,InterPro: Bacterial luciferase,reporting nucleic acid binding motif; Hypothetical protein YP_002633693.1 (Q9KBJ4) Thiamine biosynthesis protein thiC,InterPro: Thiamine biosynthesis protein ThiC,Similar to amino-terminal part of thiamin biosynthesis protein [Bacillus halodurans C-125] (BAB05652).; Hypothetical protein YP_002633694.1 (Q82FI7) Thiamine biosynthesis protein thiC,InterPro: Thiamine biosynthesis protein ThiC,Similar to carboxy-terminal part of thiamin biosynthesis protein [Bacillus halodurans C-125] (BAB05652).; Hypothetical protein YP_002633695.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002633696.1 the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress YP_002633697.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence YP_002633698.1 (O31605) Oligoendopeptidase F homolog (EC 3.4.24.-),InterPro: Oligoendopeptidase F; Hypothetical protein YP_002633699.1 Hypothetical protein YP_002633700.1 Similar to carboxy-terminal part of thiol protease [Staphylococcus aureus] (BAB86291).,InterPro: Peptidase C47 staphopain peptidase; Hypothetical protein YP_002633701.1 Similar to amino-terminal part of thiol protease [Staphylococcus aureus] (BAB86291).; Hypothetical protein YP_002633702.1 (Q81YT8) Probable disulfide bond formation protein D precursor (Disulfide oxidoreductase D) (Thiol-disulfide oxidoreductase D); Hypothetical protein YP_002633703.1 (Q9CC59) Hemoglobin-like protein HbO,InterPro: Protozoan/cyanobacterial globin; Hypothetical protein YP_002633704.1 (P30871) Hypothetical protein ygiF (ORFXE),InterPro: Adenylate cyclase; Hypothetical protein YP_002633705.1 Hypothetical protein YP_002633706.1 (Q49640) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP 3-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase),InterPro: RelA/SpoT; Hypothetical protein YP_002633707.1 catalyzes the phosphorylation of NAD to NADP YP_002633708.1 (O31613) Hypothetical pseudouridine synthase yjbO (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase RluD; Hypothetical protein YP_002633709.1 (O67820) Inosine-5-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD),InterPro: Divalent cation transporter; Hypothetical protein YP_002633710.1 (Q83SQ3) Glutathione-regulated potassium-efflux system protein kefC (K(+)/H(+) antiporter),InterPro: Sodium/hydrogen exchanger; Hypothetical protein YP_002633711.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_002633712.1 (P71369) Hypothetical metabolite transport protein HI1104,InterPro: General substrate transporter; Hypothetical protein YP_002633713.1 (O34472) Hypothetical UPF0118 protein yrrI,InterPro: Protein of unknown function UPF0118,UPF0118, Domain of unknown function DUF20. This transmembrane region is found in putative permeases and predicted transmembrane proteins it has no known function. It is not clear what source suggested that these proteins may be permeases and this information should be treated with caution.; Hypothetical protein YP_002633714.1 (P30145) Sodium/proton-dependent alanine carrier protein,InterPro: Sodium:alanine symporter; Hypothetical protein YP_002633715.1 (P31471) Protein yieL,InterPro: Putative esterase; Hypothetical protein YP_002633716.1 similar to 2'-5' RNA ligase YP_002633717.1 (P39843) Multidrug resistance protein 2 (Multidrug-efflux transporter 2),InterPro: Major facilitator superfamily; Hypothetical protein YP_002633718.1 processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids YP_002633719.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of lysine to UDP-N-acetylmuramoyl-L-alanyl-D-glutamate forming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine YP_002633720.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein YP_002633721.1 (O34447) Hypothetical protein yceF,InterPro: Integral membrane protein TerC family; Hypothetical protein YP_002633722.1 (P39668) Hypothetical serine protease yyxA (EC 3.4.21.-),InterPro: Peptidase S1 chymotrypsin family; Hypothetical protein YP_002633723.1 (P43440) V-type sodium ATP synthase subunit J (EC 3.6.3.14) (Na(+)-translocating ATPase subunit J),InterPro: Cation transporter; Hypothetical protein YP_002633724.1 (P71047) Hypothetical UPF0074 protein ywgB precursor,InterPro: Protein of unknown function UPF0074; Hypothetical protein YP_002633725.1 (P77212) Probable pyridine nucleotide-disulfide oxidoreductase ykgC,InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein YP_002633726.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis YP_002633727.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002633728.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-hosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_002633729.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_002633730.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_002633731.1 (Q8R5Q4) Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase),InterPro: Aminotransferase class I and II; Hypothetical protein YP_002633732.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_002633733.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_002633734.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_002633735.1 (P22862) Arylesterase (EC 3.1.1.2) (Aryl-ester hydrolase),InterPro: Alpha/beta hydrolase fold; Hypothetical protein YP_002633736.1 Similarity to N-terminal part of transcriptional regulator [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300184).; Hypothetical protein YP_002633737.1 similar to amino-terminal part of hypothetical protein CdifQ_02000652 [Clostridium difficile QCD-32g58] ZP_01232326; Hypothetical protein YP_002633738.1 similar to carboxy-terminal part of hypothetical protein CdifQ_02000652 [Clostridium difficile QCD-32g58] ZP_01232326; Hypothetical protein YP_002633739.1 (P40396) Competence transcription factor (CTF) (Competence protein K); Hypothetical protein YP_002633740.1 (O31594) Hypothetical protein yhzC; Hypothetical protein YP_002633741.1 (P47512) Probable lipoate-protein ligase A (EC 6.3.2.-),InterPro: Lipoyltransferase and lipoate-protein ligase; Hypothetical protein YP_002633742.1 Hypothetical protein YP_002633743.1 Hypothetical protein YP_002633744.1 Hypothetical protein YP_002633745.1 InterPro: TM2; Hypothetical protein YP_002633746.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633747.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate YP_002633748.1 (Q51508) Salicylate biosynthesis isochorismate synthase (EC 5.4.4.2) (Isochorismate mutase),InterPro: Isochorismate synthase; Hypothetical protein YP_002633749.1 (P23970) Menaquinone biosynthesis protein menD [Includes: 2-succinyl-6-hydroxy-24-cyclohexadiene-1-carboxylate synthase (EC 2.5.1.64) (SHCHC synthase); 2-oxoglutarate decarboxylase (EC 4.1.1.71) (Alpha-ketoglutarate decarboxylase) (KDC)],InterPro: Menaquinone biosynthesis protein; Hypothetical protein YP_002633750.1 (P23974) Putative esterase ytxM (EC 3.1.-.-),InterPro: Alpha/beta hydrolase fold; Hypothetical protein YP_002633751.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA YP_002633752.1 (O34777) Organic hydroperoxide resistance transcriptional regulator,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002633753.1 (P16524) Putative aminotransferase A (EC 2.6.1.-),InterPro: Aminotransferase class I and II; Hypothetical protein YP_002633754.1 (Q52778) Nodulation protein nolL (EC 2.3.1.-),InterPro: Acyltransferase 3 family; Hypothetical protein YP_002633755.1 (P96708) Putative HTH-type transcriptional regulator ydgJ,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002633756.1 (P52081) Bifunctional autolysin precursor [Includes: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28); Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (EC 3.2.1.96)],InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Hypothetical protein YP_002633757.1 (P52080) Hypothetical UPF0039 protein SAV1054/SA0906/MW0937 (ORF3),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633758.1 (P52079) Hypothetical protein SAV1055/SA0907/MW0938 (ORF2); Hypothetical protein YP_002633759.1 (Q81K33) Membrane-bound protein lytR,InterPro: Cell envelope-related transcriptional attenuator; Hypothetical protein YP_002633760.1 (P18159) Probable phosphomannomutase (EC 5.4.2.8) (PMM),InterPro: Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; Hypothetical protein YP_002633761.1 (P05364) Beta-lactamase precursor (EC 3.5.2.6) (Cephalosporinase),InterPro: Beta-lactamase; Hypothetical protein YP_002633762.1 Reporting signal peptide (SignalP 3.0); Hypothetical protein YP_002633763.1 (P23532) PTS system lactose-specific IIA component (EIIA-Lac) (Lactose-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Lac),InterPro: Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; Hypothetical protein YP_002633764.1 (P50976) PTS system lactose-specific IIBC component (EIIBC-Lac) (Lactose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Lac),InterPro: PTS lactose/cellobiose IIC component; Hypothetical protein YP_002633765.1 catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside YP_002633766.1 (Q9K8K8) Arsenate reductase (EC 1.20.4.1) (Arsenical pump modifier),InterPro: Low molecular weight phosphotyrosine protein phosphatase; Hypothetical protein YP_002633767.1 (P74985) Arsenical pump membrane protein (Arsenic efflux pump protein),InterPro: Arsenical pump membrane protein; Hypothetical protein YP_002633768.1 (Q8NVC9) Tagatose 16-diphosphate aldolase (EC 4.1.2.40) (Tagatose-bisphosphate aldolase) (D-tagatose-16-bisphosphate aldolase),InterPro: Tagatose 16-diphosphate aldolase,Tagatose 16-diphosphate aldolase Gram positive; Hypothetical protein YP_002633769.1 (P26421) Tagatose-6-phosphate kinase (EC 2.7.1.144) (Phosphotagatokinase),InterPro: Carbohydrate kinase PfkB; Hypothetical protein YP_002633770.1 catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate YP_002633771.1 (P26423) Galactose-6-phosphate isomerase lacA subunit (EC 5.3.1.26),InterPro: Ribose/galactose isomerase; Hypothetical protein YP_002633772.1 (P18816) Lactose phosphotransferase system repressor,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein YP_002633773.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides YP_002633774.1 (P34959) Quinol oxidase polypeptide IV (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxD),InterPro: Prokaryotic Cytochrome C oxidase subunit IV; Hypothetical protein YP_002633775.1 (P34958) Quinol oxidase polypeptide III (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxC) (Oxidase aa(3)-600 subunit 3),InterPro: Cytochrome c oxidase subunit III; Hypothetical protein YP_002633776.1 (P34956) Quinol oxidase polypeptide I (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxB) (Oxidase aa(3)-600 subunit 1),InterPro: Cytochrome c oxidase subunit I; Hypothetical protein YP_002633777.1 (P34957) Quinol oxidase polypeptide II precursor (EC 1.9.3.-) (Quinol oxidase aa3-600 subunit qoxA) (Oxidase aa(3)-600 subunit 2),InterPro: Cytochrome aa3-600 quinol oxidase subunit II; Hypothetical protein YP_002633778.1 Predicted signal peptide (SignalP 3.0) aa 1..26; Hypothetical protein YP_002633779.1 (P24232) Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Dihydropteridine reductase) (EC 1.5.1.34) (Ferrisiderophore reductase B) (Nitric oxide dioxygenase) (EC 1.14.12.17) (NOD),InterPro: Globin; Hypothetical protein YP_002633780.1 (P32153) Putative frv operon protein frvX,InterPro: Peptidase M42; Hypothetical protein YP_002633781.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_002633782.1 (P12044) Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) (AIR carboxylase) (AIRC),InterPro: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; Hypothetical protein YP_002633783.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_002633784.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_002633785.1 (P12049) Hypothetical UPF0062 protein yexA,InterPro: Protein of unknown function UPF0062; Hypothetical protein YP_002633786.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002633787.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002633788.1 (P00497) Amidophosphoribosyltransferase precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase),InterPro: Amidophosphoribosyl transferase; Hypothetical protein YP_002633789.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_002633790.1 (Q8NX89) Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (GART) (GAR transformylase) (5-phosphoribosylglycinamide transformylase),InterPro: Phosphoribosylglycinamide formyltransferase; Hypothetical protein YP_002633791.1 involved in de novo purine biosynthesis YP_002633792.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_002633793.1 Hypothetical protein YP_002633794.1 (P75357) Hypothetical protein MG302 homolog (A05_orf317),InterPro: Cobalt transport protein; Hypothetical protein YP_002633795.1 (Q58488) Probable cobalt transport ATP-binding protein cbiO,InterPro: ABC transporter; Hypothetical protein YP_002633796.1 Hypothetical protein YP_002633797.1 Hypothetical protein YP_002633798.1 (P75876) Hypothetical UPF0064 protein yccW,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein YP_002633799.1 Hypothetical protein YP_002633800.1 (P23534) Phosphocarrier protein HPr (Histidine-containing protein),InterPro: Phosphocarrier HPr protein,Has been sequenced previously in S. carnosus; Hypothetical protein YP_002633802.1 (Q47414) Glutaredoxin-like protein nrdH; Hypothetical protein YP_002633803.1 (P94364) Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-),InterPro: Cytochrome bd ubiquinol oxidase subunit I; Hypothetical protein YP_002633804.1 (Q9KPG4) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase); Hypothetical protein YP_002633805.1 (P39760) Hypothetical protein ykqB (ORF4),InterPro: TrkA-N; Hypothetical protein YP_002633806.1 (P42404) Hypothetical protein yckF,InterPro: Sugar isomerase (SIS); Hypothetical protein YP_002633807.1 (P39304) Probable hexulose-6-phosphate synthase (EC 4.1.2.-) (HUMPS) (D-arabino 3-hexulose 6-phosphate formaldehyde lyase),InterPro: Orotidine 5-phosphate decarboxylase; Hypothetical protein YP_002633808.1 (P42406) Hypothetical UPF0087 protein yckH,InterPro: Protein of unknown function DUF24; Hypothetical protein YP_002633809.1 (Q45493) Hypothetical UPF0036 protein ykqC,InterPro: Conserved hypothetical protein MG423; Hypothetical protein YP_002633810.1 Hypothetical protein YP_002633811.1 Hypothetical protein YP_002633812.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002633813.1 (P15215) Laminin gamma-1 chain precursor (Laminin B2 chain); Hypothetical protein YP_002633814.1 (P60089) Pyruvate dehydrogenase E1 component alpha subunit (EC 1.2.4.1),InterPro: Dehydrogenase E1 component; Hypothetical protein YP_002633815.1 (Q8CPN2) Pyruvate dehydrogenase E1 component beta subunit (EC 1.2.4.1),InterPro: Transketolase central region; Hypothetical protein YP_002633816.1 (Q99V06) Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex),InterPro: Catalytic domain of components of various dehydrogenase complexes; Hypothetical protein YP_002633817.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_002633818.1 (Q8CT12) Hypothetical UPF0223 protein SE0795,InterPro: Protein of unknown function UPF0223; Hypothetical protein YP_002633819.1 (P38522) Putative HTH-type transcriptional regulator ycjC,InterPro: Helix-turn-helix motif; Hypothetical protein YP_002633820.1 (P23858) Spermidine/putrescine transport ATP-binding protein potA,InterPro: Spermidine/putrescine ABC transporter ATP-binding subunit; Hypothetical protein YP_002633821.1 (Q56060) Spermidine/putrescine transport system permease protein potB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002633822.1 (Q83RR7) Spermidine/putrescine transport system permease protein potC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002633823.1 (P45168) Spermidine/putrescine-binding periplasmic protein 1 precursor (SPBP),InterPro: Bacterial extracellular solute-binding protein family 1; Hypothetical protein YP_002633824.1 (P26019) DNA polymerase alpha catalytic subunit (EC 2.7.7.7); Hypothetical protein YP_002633825.1 (Q02100) CRE-binding bZIP protein SKO1; Hypothetical protein YP_002633826.1 (Q93V04) Manganese transport protein mntH (Hop-inducible cation transporter),InterPro: Natural resistance-associated macrophage protein; Hypothetical protein YP_002633827.1 Hypothetical protein YP_002633828.1 (Q45499) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase) (Inositol-1-phosphatase) (I-1-Pase),InterPro: Inositol monophosphatase; Hypothetical protein YP_002633829.1 (O07630) Hypothetical protein ylaF; Hypothetical protein YP_002633830.1 (O07631) GTP-binding protein typA/bipA homolog,InterPro: GTP-binding protein TypA; Hypothetical protein YP_002633831.1 (O07633) Hypothetical protein ylaI; Hypothetical protein YP_002633832.1 (O07636) Hypothetical protein ylaL; Hypothetical protein YP_002633833.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; putative ligand binding protein YP_002633834.1 (O07639) Hypothetical protein ylaO,InterPro: Cell cycle protein; Hypothetical protein YP_002633835.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_002633836.1 (P12946) Cytochrome AA3 controlling protein,InterPro: Cytochrome oxidase assembly; Hypothetical protein YP_002633837.1 converts protoheme IX and farnesyl diphosphate to heme O YP_002633838.1 (Q04453) Hypothetical 21.0 kDa protein in ctaF 3region (ORF1),InterPro: Protein of unknown function DUF420; Hypothetical protein YP_002633839.1 Hypothetical protein YP_002633840.1 (O34412) Regulatory protein ylbF; Hypothetical protein YP_002633841.1 (P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase; Hypothetical protein YP_002633842.1 (Q8CSZ8) Hypothetical UPF0298 protein SE0821; Hypothetical protein YP_002633843.1 Hypothetical protein YP_002633844.1 (P44869) Putative methylase HI0767 (EC 2.1.1.-),InterPro: Conserved hypothetical protein 95; Hypothetical protein YP_002633845.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002633846.1 (Q28488) Mu-crystallin,InterPro: Ornithine cyclodeaminase/mu-crystallin; Hypothetical protein YP_002633847.1 (P10486) Type I restriction enzyme EcoR124II R protein (EC 3.1.21.3) (R.EcoR124II),InterPro: Protein of unknown function DUF795; Hypothetical protein YP_002633848.1 InterPro: Protein of unknown function DUF177; Hypothetical protein YP_002633849.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_002633850.1 (P74261) Hypothetical tRNA/rRNA methyltransferase slr1673 (EC 2.1.1.-),InterPro: tRNA/rRNA methyltransferase (SpoU); Hypothetical protein YP_002633851.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002633852.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_002633853.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_002633854.1 (Q97H50) Flagellar hook-basal body complex protein fliE,InterPro: Protein of unknown function DUF710; Hypothetical protein YP_002633855.1 InterPro: Colicin V production protein; Hypothetical protein YP_002633856.1 (Q8K409) DNA polymerase beta (EC 2.7.7.7),InterPro: DNA polymerase family X; Hypothetical protein YP_002633857.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange YP_002633858.1 (Q9ZEH4) Thioredoxin (TRX),InterPro: Thioredoxin type domain; Hypothetical protein YP_002633859.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002633860.1 (P08064) Succinate dehydrogenase cytochrome B-558 subunit; Hypothetical protein YP_002633861.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002633862.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_002633863.1 (P52575) Isoflavone reductase (EC 1.3.1.-) (IFR) (NADPH:isoflavone oxidoreductase); Hypothetical protein YP_002633864.1 (P24201) Transcriptional repressor mprA (EmrR protein),InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002633865.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_002633866.1 hydrolyzes non-standard nucleotides such as xanthine and inosine YP_002633867.1 (P94559) Hypothetical UPF0025 protein ysnB,Note: similarity to N-terminal part of hypothetical protein SSP1643 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305](YP_301733); Hypothetical protein YP_002633868.1 Note: similarity to C-terminal part of hypothetical protein SSP1643 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305](YP_301733); Hypothetical protein YP_002633869.1 Hypothetical protein YP_002633870.1 (Q8XKU7) SsrA-binding protein,InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein YP_002633871.1 (P16681) PhnB protein; Hypothetical protein YP_002633872.1 (Q10081) Hypothetical UPF0039 protein C11D3.02c in chromosome I,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633873.1 Hypothetical protein YP_002633874.1 Hypothetical protein YP_002633875.1 Hypothetical protein YP_002633876.1 Hypothetical protein YP_002633877.1 Hypothetical protein YP_002633878.1 (O45244) Probable pre-mRNA splicing factor ATP-dependent RNA helicase mog-4 (Sex determination protein mog-4) (Masculinization of germ line protein 4); Hypothetical protein YP_002633879.1 Hypothetical protein YP_002633880.1 Hypothetical protein YP_002633881.1 (P11926) Ornithine decarboxylase (EC 4.1.1.17) (ODC); Hypothetical protein YP_002633882.1 Hypothetical protein YP_002633883.1 (P33999) Hypothetical protein yjjG,InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein YP_002633884.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002633886.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_002633887.1 (Q8CSX7) S-adenosyl-methyltransferase mraW (EC 2.1.1.-),InterPro: Bacterial methyltransferase; Hypothetical protein YP_002633889.1 (Q07868) Penicillin-binding protein 2B (PBP-2B),InterPro: Penicillin-binding protein transpeptidase domain; Hypothetical protein YP_002633890.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002633891.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_002633892.1 (P16655) Division initiation protein (Cell division and sporulation protein),InterPro: Cell division protein FtsQ; Hypothetical protein YP_002633893.1 (Q99US9) Cell division protein ftsA,InterPro: Cell division protein FtsA; Hypothetical protein YP_002633894.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_002633895.1 (Q9ZHA4) Hypothetical UPF0124 protein in ftsZ 3region,InterPro: Protein of unknown function DUF152; Hypothetical protein YP_002633896.1 (Q9CPD5) Hypothetical UPF0001 protein PM0112,InterPro: Protein of unknown function UPF0001; Hypothetical protein YP_002633897.1 (P73376) Ycf50-like protein,InterPro: Protein of unknown function DUF552; Hypothetical protein YP_002633898.1 (P25254) Hypothetical protein PA0392,InterPro: Protein of unknown function YGGT; Hypothetical protein YP_002633899.1 (P57481) Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: RNA-binding S4; Hypothetical protein YP_002633900.1 (O15079) Syntaphilin,InterPro: DivIVA; Hypothetical protein YP_002633901.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_002633902.1 note: similar to N-terminal part of glyoxalase family protein [Staphylococcus saprophyticus subsp.saprophyticus ATCC 15305] (YP_301667),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein YP_002633903.1 note: similar to C-terminal part of glyoxalase family protein [Staphylococcus epidermidis RP62A] (YP_188343); Hypothetical protein YP_002633904.1 (P22865) Secreted 45 kDa protein precursor,InterPro: CHAP; Hypothetical protein YP_002633905.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_002633906.1 (Q45480) Hypothetical pseudouridine synthase ylyB (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase RluD; Hypothetical protein YP_002633907.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity YP_002633908.1 (P41006) Uracil permease (Uracil transporter),InterPro: Xanthine/uracil permease family; Hypothetical protein YP_002633909.1 (Q8CPJ7) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase),InterPro: Aspartate carbamoyltransferase; Hypothetical protein YP_002633910.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_002633911.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_002633912.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_002633913.1 (P46536) Dihydroorotate dehydrogenase electron transfer subunit,InterPro: Oxidoreductase FAD/NAD(P)-binding; Hypothetical protein YP_002633914.1 (Q8RG85) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD),InterPro: Dihydroorotate dehydrogenase 1; Hypothetical protein YP_002633915.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_002633916.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002633917.1 Hypothetical protein YP_002633918.1 (Q9P997) V-type ATP synthase alpha chain (EC 3.6.3.14) (V-type ATPase subunit A) [Contains: Tac atpA intein (Tac VMA intein)]; Hypothetical protein YP_002633919.1 (P96717) Putative protein-tyrosine phosphatase ywqE (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Hypothetical protein YP_002633920.1 (Q8CCP0) Serologically defined colon cancer antigen,InterPro: Fibronectin-binding A N-terminal; Hypothetical protein YP_002633921.1 Essential for recycling GMP and indirectly, cGMP YP_002633922.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_002633923.1 (Q38879) Thioredoxin H-type 2 (TRX-H-2),InterPro: Thioredoxin domain 2; Hypothetical protein YP_002633924.1 (P44953) Coenzyme A biosynthesis bifunctional protein coaBC (DNA/pantothenate metabolism flavoprotein) [Includes: Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (PPCDC) (CoaC); Phosphopantothenate--cysteine ligase (EC 6.3.2.5) (Phospho,InterPro: DNA/pantothenate metabolism flavoprotein; Hypothetical protein YP_002633925.1 (P94461) Primosomal protein N (Replication factor Y),InterPro: Primosomal protein n; Hypothetical protein YP_002633926.1 (P30043) Flavin reductase (EC 1.5.1.30) (FR) (NADPH-dependent diaphorase) (NADPH-flavin reductase) (FLR) (Biliverdin reductase B) (EC 1.3.1.24) (BVR-B) (Biliverdin-IX beta-reductase) (Green heme binding protein) (GHBP); Hypothetical protein YP_002633927.1 (Q54518) Protein-tyrosine phosphatase cpsB (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Hypothetical protein YP_002633928.1 Hypothetical protein YP_002633929.1 Hypothetical protein YP_002633930.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_002633931.1 (Q8CSW1) Methionyl-tRNA formyltransferase (EC 2.1.2.9),InterPro: Methionyl-tRNA formyltransferase; Hypothetical protein YP_002633932.1 (P36929) Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase),InterPro: Sun protein; Hypothetical protein YP_002633933.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_002633934.1 (P75525) Putative protein phosphatase (EC 3.1.3.16),InterPro: Protein phosphatase 2C-like; Hypothetical protein YP_002633935.1 (O34507) Probable serine/threonine-protein kinase yloP (EC 2.7.11.1),InterPro: Protein kinase; Hypothetical protein YP_002633936.1 (Q8CSV8) Probable GTPase engC (EC 3.6.1.-),InterPro: Protein of unknown function DUF258; Hypothetical protein YP_002633937.1 (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E),InterPro: Ribulose-phosphate 3-epimerase; Hypothetical protein YP_002633938.1 (P41888) Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK) (Thiamine kinase),InterPro: Thiamin pyrophosphokinase catalytic domain; Hypothetical protein YP_002633939.1 (P93703) Cytochrome P450 71C3 (EC 1.14.-.-); Hypothetical protein YP_002633940.1 required for 70S ribosome assembly YP_002633941.1 (O34318) Hypothetical protein yloU,InterPro: Protein of unknown function DUF322; Hypothetical protein YP_002633942.1 (P75231) Hypothetical protein MG369 homolog (G12_orf558),InterPro: Dak phosphatase domain; Hypothetical protein YP_002633943.1 (O34635) Probable L-serine dehydratase beta chain (EC 4.3.1.17) (L-serine deaminase) (SDH) (L-SD),InterPro: Iron-sulfur-dependent L-serine dehydratase beta subunit; Hypothetical protein YP_002633944.1 (P16095) L-serine dehydratase 1 (EC 4.3.1.17) (L-serine deaminase 1) (SDH 1) (L-SD1),InterPro: L-serine dehydratase alpha subunit; Hypothetical protein YP_002633945.1 catalyzes branch migration in Holliday junction intermediates YP_002633946.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria YP_002633947.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_002633948.1 (P71019) Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) (MCT),InterPro: Acyl transferase domain; Hypothetical protein YP_002633949.1 (Q99QK7) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002633950.1 carries the fatty acid chain in fatty acid biosynthesis YP_002633951.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_002633952.1 (P51834) Chromosome partition protein smc,InterPro: Structural maintenance of chromosome protein SMC C-terminal; Hypothetical protein YP_002633953.1 (P51835) Cell division protein ftsY homolog,InterPro: Cell division transporter substrate-binding protein FtsY; Hypothetical protein YP_002633954.1 (Q99UN4) Hypothetical UPF0122 protein SAV1236/SA1079/MW1119,InterPro: Putative helix-turn-helix protein YlxM/p13-like; Hypothetical protein YP_002633955.1 (P37105) Signal recognition particle protein (Fifty-four homolog),InterPro: GTP-binding signal recognition particle (SRP54) G-domain,Note: Similar to N-terminal part of ffh [Staphylococcus haemolyticus JCSC1435] (BAE04986); Hypothetical protein YP_002633956.1 (P37105) Signal recognition particle protein (Fifty-four homolog),InterPro: Signal peptide binding (SRP54) M-domain,Note: Similar to C-terminal part of ffh [Staphylococcus aureus subsp. aureus N315] (BAB42332); Hypothetical protein YP_002633957.1 (P54940) Hypothetical protein yxeA precursor,InterPro: Conserved hypothetical protein 1655; Hypothetical protein YP_002633958.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_002633959.1 Essential for efficient processing of 16S rRNA YP_002633960.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002633961.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_002633962.1 (Q8CQD9) Accumulation-associated protein precursor,InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein YP_002633963.1 Hypothetical protein YP_002633964.1 Hypothetical protein YP_002633965.1 (P15028) Iron(III) dicitrate-binding periplasmic protein precursor,InterPro: Periplasmic binding protein; Hypothetical protein YP_002633966.1 (Q9PCR2) DNA mismatch repair protein mutS; Hypothetical protein YP_002633967.1 (Q99390) Hypothetical 31.7 kDa protein in traX-finO intergenic region (ORFC),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002633968.1 (P52598) Putative HTH-type transcriptional regulator ygbI,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein YP_002633969.1 (P71747) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase),InterPro: ABC transporter; Hypothetical protein YP_002633970.1 (Q44123) Ferric transport system permease protein fbpB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002633971.1 (P43951) Protein HI0131 precursor; Hypothetical protein YP_002633972.1 Weak SD sequence; Hypothetical protein YP_002633973.1 (P31030) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT); Hypothetical protein YP_002633974.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate YP_002633975.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc) YP_002633976.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_002633977.1 catalyzes the interconversion of succinyl-CoA and succinate YP_002633978.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_002633979.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_002633980.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_002633981.1 (Q7ZAJ4) Tyrosine recombinase xerC,InterPro: Phage integrase; Hypothetical protein YP_002633982.1 heat shock protein involved in degradation of misfolded proteins YP_002633983.1 heat shock protein involved in degradation of misfolded proteins YP_002633984.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_002633985.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002633986.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002633987.1 Catalyzes the phosphorylation of UMP to UDP YP_002633988.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_002633989.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_002633990.1 (O31752) Phosphatidate cytidylyltransferase (EC 2.7.7.41) (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase),InterPro: Phosphatidate cytidylyltransferase; Hypothetical protein YP_002633991.1 (Q99UL0) Hypothetical zinc metalloprotease SAV1262/SA1105 (EC 3.4.24.-),InterPro: Putative membrane-associated zinc metalloprotease; Hypothetical protein YP_002633992.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_002633993.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity YP_002633994.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_002633995.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_002633996.1 (P32728) Hypothetical protein ylxR (ORF3),InterPro: Protein of unknown function DUF448; Hypothetical protein YP_002633997.1 (P32729) Probable ribosomal protein ylxQ,InterPro: Ribosomal protein L7Ae/L30e/S12e/Gadd45; Hypothetical protein YP_002633998.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_002633999.1 (P06886) Toxic shock syndrome toxin-1 precursor (TSST-1),InterPro: Staphylococcal/Streptococcal toxin beta-grasp; Hypothetical protein YP_002634000.1 (P17412) Fumarate reductase flavoprotein subunit (EC 1.3.99.1),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein YP_002634001.1 (P10908) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),Similar ro N-terminal part of: glycerophosphoryl diester phosphodiesterase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300260). ,subsp. saprophyticus ATCC 15305]; Hypothetical protein YP_002634002.1 (P10908) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),Similar to C-terminal part of:glycerophosphoryl diester phosphodiesterase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300260); Hypothetical protein YP_002634003.1 (P32135) Hypothetical protein yihN; Hypothetical protein YP_002634004.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_002634005.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_002634006.1 (P54575) Riboflavin biosynthesis protein ribC [Includes: Riboflavin kinase (EC 2.7.1.26) (Flavokinase); FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase)],InterPro: Riboflavin kinase / FAD synthetase; Hypothetical protein YP_002634007.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002634008.1 (P50849) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) (Vegetative protein 15) (VEG15),InterPro: 3 exoribonuclease; Hypothetical protein YP_002634009.1 (Q45493) Hypothetical UPF0036 protein ykqC,InterPro: Conserved hypothetical protein MG423; Hypothetical protein YP_002634010.1 (Q99UJ6) DNA translocase ftsK,InterPro: Cell divisionFtsK/SpoIIIE protein; Hypothetical protein YP_002634011.1 (O31761) Hypothetical transcriptional regulator ymfC; Hypothetical protein YP_002634012.1 (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-),InterPro: Peptidase M16 inactive; Hypothetical protein YP_002634013.1 (P71006) Putative zinc-protease albF (EC 3.4.99.-) (Antilisterial bacteriocin subtilosin biosynthesis protein albF),InterPro: Peptidase M16 inactive,pfam00675: Peptidase_M16, Insulinase (only 78% aligned); Hypothetical protein YP_002634014.1 (Q9X248) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002634015.1 (Q9LZ25) Probable disease resistance protein At5g04720; Hypothetical protein YP_002634016.1 (Q57065) Hypothetical protein HI0367,Predicted TM helix at N-terminus; Hypothetical protein YP_002634017.1 (Q99UI9) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) (Phosphatidylglycerophosphate synthase) (PGP synthase),InterPro: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Hypothetical protein YP_002634018.1 (Q97D94) CinA-like protein,InterPro: Competence-damaged protein; Hypothetical protein YP_002634019.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_002634020.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP YP_002634021.1 (P45290) Hypothetical protein HI1643,InterPro: Conserved hypothetical protein 698; Hypothetical protein YP_002634022.1 (O33812) Putative HTH-type transcriptional regulator in lacR 5region (Fragment),InterPro: LysR substrate binding domain; Hypothetical protein YP_002634023.1 (Q57789) Hypothetical protein MJ0343; Hypothetical protein YP_002634024.1 (P47488) Hypothetical protein MG246,InterPro: Conserved hypothetical protein 282,InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002634025.1 (O27112) 2-oxoglutarate synthase subunit korA (EC 1.2.7.3) (2-ketoglutarate oxidoreductase alpha chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase alpha subunit),InterPro: Pyruvate flavodoxin/ferredoxin oxidoreductase N-terminal; Hypothetical protein YP_002634026.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_002634027.1 (P56605) Hypothetical protein yoeB; Hypothetical protein YP_002634028.1 (P72699) Hypothetical UPF0045 protein sll0230; Hypothetical protein YP_002634029.1 (P42061) Oligopeptide-binding protein appA precursor,InterPro: Bacterial extracellular solute-binding protein family 5; Hypothetical protein YP_002634030.1 (P42064) Oligopeptide transport ATP-binding protein appD,InterPro: ABC transporter,Truncated at N-terminus by about 17 aa.; Hypothetical protein YP_002634031.1 (P42065) Oligopeptide transport ATP-binding protein appF,InterPro: ABC transporter; Hypothetical protein YP_002634032.1 (P37316) Dipeptide transport system permease protein dppB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002634033.1 (P42063) Oligopeptide transport system permease protein appC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002634034.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_002634035.1 (P28706) DNA repair protein rad13; Hypothetical protein YP_002634036.1 Hypothetical protein YP_002634037.1 (P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase; Hypothetical protein YP_002634038.1 This protein performs the mismatch recognition step during the DNA repair process YP_002634039.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_002634040.1 (P30300) Glycerol uptake operon antiterminator regulatory protein,InterPro: Glycerol-3-phosphate responsive antiterminator; Hypothetical protein YP_002634041.1 (Q9X1E3) Probable glycerol uptake facilitator protein,InterPro: MIP family; Hypothetical protein YP_002634042.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP YP_002634043.1 (P18158) Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.99.5),InterPro: FAD dependent oxidoreductase; Hypothetical protein YP_002634044.1 (Q8R431) Monoglyceride lipase (EC 3.1.1.23),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002634045.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002634046.1 (O31796) Hfq protein,InterPro: Host factor Hfq; Hypothetical protein YP_002634047.1 (O48646) Probable phospholipid hydroperoxide glutathione peroxidase mitochondrial precursor (EC 1.11.1.12) (PHGPx) (AtGPX1),InterPro: Glutathione peroxidase; Hypothetical protein YP_002634048.1 (P25519) GTP-binding protein hflX,InterPro: Restriction endonuclease; Hypothetical protein YP_002634049.1 (P45624) Hypothetical 33.9 kDa protein in glnA 5region (ORF306); Hypothetical protein YP_002634050.1 (Q59812) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS),InterPro: Glutamine synthetase type I; Hypothetical protein YP_002634051.1 (P37582) HTH-type transcriptional regulator glnR,InterPro: Bacterial regulatory protein MerR family; Hypothetical protein YP_002634052.1 Hypothetical protein YP_002634053.1 (Q8CPD8) Cardiolipin synthetase 1 (EC 2.7.8.-) (Cardiolipin synthase 1) (CL synthase 1),Similar to N-terminus of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE04899); Hypothetical protein YP_002634054.1 (Q99SG9) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase) (CL synthase),InterPro: Phospholipase D/Transphosphatidylase,Similar to C-terminus of putative cardiolipin synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300885); Hypothetical protein YP_002634055.1 Hypothetical protein YP_002634056.1 (P43269) Thermonuclease precursor (EC 3.1.31.1) (TNase) (Micrococcal nuclease) (Staphylococcal nuclease),InterPro: Staphylococcus nuclease (SNase-like); Hypothetical protein YP_002634057.1 (P15028) Iron(III) dicitrate-binding periplasmic protein precursor,InterPro: Periplasmic binding protein,No signal peptide / lipoprotein-specif cleavage site!; Hypothetical protein YP_002634059.1 Weak similarity to staphylococcal accessory regulator R; Hypothetical protein YP_002634060.1 Hypothetical protein YP_002634061.1 Hypothetical protein YP_002634062.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive YP_002634063.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_002634064.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_002634065.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_002634066.1 (P54947) Hypothetical protein yxeH,InterPro: Cof protein; Hypothetical protein YP_002634067.1 Hypothetical protein YP_002634068.1 (P25737) Lysine-specific permease,InterPro: Amino acid permease-associated region; Hypothetical protein YP_002634070.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_002634071.1 (Q8CPC9) GMP reductase (EC 1.7.1.7) (Guanosine 5-monophosphate oxidoreductase) (Guanosine monophosphate reductase),InterPro: IMP dehydrogenase/GMP reductase; Hypothetical protein YP_002634072.1 Hypothetical protein YP_002634073.1 Represses a number of genes involved in the response to DNA damage YP_002634074.1 (P24180) Acriflavine resistance protein E precursor (Protein envC); Hypothetical protein YP_002634075.1 (Q8CSP4) Hypothetical UPF0291 protein SE1024; Hypothetical protein YP_002634076.1 (Q8CPC7) Transketolase (EC 2.2.1.1) (TK),InterPro: Bacterial transketolase; Hypothetical protein YP_002634077.1 (Q8E3V6) Hypothetical UPF0154 protein gbs1650,InterPro: Protein of unknown function UPF0154; Hypothetical protein YP_002634078.1 (P45710) CcdC protein; Hypothetical protein YP_002634079.1 Hypothetical protein YP_002634080.1 (P13457) Nuclease sbcCD subunit D,InterPro: Exonuclease SbcD; Hypothetical protein YP_002634081.1 (O83635) Nuclease sbcCD subunit C,InterPro: ABC transporter; Hypothetical protein YP_002634082.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_002634083.1 (P54417) Glycine betaine transporter opuD,InterPro: BCCT transporter; Hypothetical protein YP_002634084.1 Catalyzes the conversion of citrate to isocitrate YP_002634085.1 (P44679) Hypothetical protein HI0386,InterPro: 4-hydroxybenzoyl-CoA thioesterase; Hypothetical protein YP_002634086.1 InterPro: Uncharacterised conserved protein UCP034852; Hypothetical protein YP_002634087.1 (P59253) Hypothetical UPF0078 protein SE1035,InterPro: Protein of unknown function DUF205; Hypothetical protein YP_002634088.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002634089.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_002634090.1 (Q45068) Amino acid carrier protein alsT,InterPro: Sodium:alanine symporter; Hypothetical protein YP_002634091.1 (P11989) Cryptic beta-glucoside bgl operon antiterminator,InterPro: Transcriptional antiterminator bglG,>gi|2632149|emb|CAA74358.1| antiterminator [Staphylococcus carnosus], Length = 287,Score = 569 bits (1467), Expect = e-161,Identities = 287/287 (100%), Positives = 287/287 (100%); Hypothetical protein YP_002634092.1 gi|628925|pir||S46952 phosphotransferase system enzyme II (EC 2.7.1.69), glucose-specific, factor IIA -Staphylococcus carnosus; Hypothetical protein YP_002634093.1 gi|2144427|pir||S46953 phosphotransferase system enzyme II (EC 2.7.1.69), glucose-specific, factor IIB -Staphylococcus carnosus,(P20166) PTS system glucose-specific IIABC component (EIIABC-Glc) (Glucose-permease IIABC component) (Phosphotransferase enzyme II ABC component) (EC 2.7.1.69) (EII-Glc/EIII-Glc),InterPro: Phosphotransferase system EIIC; Hypothetical protein YP_002634094.1 (O32095) Hypothetical UPF0118 protein yueF,InterPro: Protein of unknown function UPF0118; Hypothetical protein YP_002634095.1 InterPro: Protein of unknown function DUF470; Hypothetical protein YP_002634096.1 (O13326) O-acetylhomoserine (Thiol)-lyase (EC 2.5.1.49) (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase),InterPro: O-acetylhomoserine/O-acetylserine sulfhydrylase; Hypothetical protein YP_002634097.1 (Q9CEC5) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine O-transsuccinylase) (HTS),InterPro: Homoserine O-succinyltransferase; Hypothetical protein YP_002634098.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_002634099.1 (Q9K6Q8) Membrane-bound protein lytR,InterPro: Cell envelope-related transcriptional attenuator; Hypothetical protein YP_002634100.1 (Q927S9) Probable tautomerase lin2709 (EC 5.3.2.-),InterPro: 4-oxalocrotonate tautomerase; Hypothetical protein YP_002634101.1 (Q81M86) DNA polymerase IV (EC 2.7.7.7) (Pol IV),InterPro: UMUC-like DNA-repair protein,Similar to N-terminus of ImpB/MucB/SamB family protein [Staphylococcus aureus subsp. aureus MRSA252] (YP_040782); Hypothetical protein YP_002634102.1 (Q9K9A8) DNA polymerase IV 2 (EC 2.7.7.7) (Pol IV 2),Similar to C-terminal part of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE04854); Hypothetical protein YP_002634103.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_002634104.1 (P77585) Hypothetical protein ypdE,InterPro: Peptidase M42; Hypothetical protein YP_002634105.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_002634106.1 (P06193) Para-aminobenzoate synthase glutamine amidotransferase component II (EC 6.3.5.8) (ADC synthase),InterPro: Glutamine amidotransferase of anthranilate synthase; Hypothetical protein YP_002634107.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_002634108.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_002634109.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis YP_002634110.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002634111.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_002634112.1 (P14304) Factor essential for expression of methicillin resistance,InterPro: Methicillin resistance protein; Hypothetical protein YP_002634113.1 (Q8CPA8) Protein femB,InterPro: Methicillin resistance protein; Hypothetical protein YP_002634114.1 (P23900) Glycerol uptake/efflux facilitator protein; Hypothetical protein YP_002634115.1 (P45051) Oligopeptide transport ATP-binding protein oppF,InterPro: ABC transporter; Hypothetical protein YP_002634116.1 (P33593) Nickel transport ATP-binding protein nikD,InterPro: ABC transporter; Hypothetical protein YP_002634117.1 (P94312) Dipeptide transport system permease protein dppC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002634118.1 (P75798) Hypothetical ABC transporter permease protein yliC,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002634119.1 (P26906) Dipeptide-binding protein dppE precursor,Similar to C-terminal part (aa 396 - 491) of putative extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] (CAG41981): length 491 aa; Hypothetical protein YP_002634120.1 (P75797) Putative binding protein yliB precursor,InterPro: Bacterial extracellular solute-binding protein family 5,Similar to N-terminus (aa 1 - 395) of putative extracellular solute-binding lipoprotein [Staphylococcus aureus subsp. aureus MSSA476] (CAG41981): length 491 aa; Hypothetical protein YP_002634121.1 Hypothetical protein YP_002634122.1 (Q9CEV7) Oligoendopeptidase F homolog (EC 3.4.24.-),InterPro: Peptidase M3; Hypothetical protein YP_002634123.1 (O32488) Phosphate transport system protein phoU,InterPro: PhoU; Hypothetical protein YP_002634124.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_002634125.1 (P46340) Probable ABC transporter permease protein yqgI,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002634126.1 (Q9CNJ6) Phosphate transport system permease protein pstA,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002634127.1 (Q55200) Protein sphX precursor,InterPro: Bacterial extracellular solute-binding protein family 1; Hypothetical protein YP_002634128.1 Hypothetical protein YP_002634129.1 (P75790) Hypothetical ABC transporter ATP-binding protein ybiT,InterPro: ABC transporter,Interpro: Hypothetical ABC transporter ATP-binding protein; Hypothetical protein YP_002634130.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_002634131.1 (O67716) Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH),InterPro: Aspartate-semialdehyde dehydrogenase USG-1 related; Hypothetical protein YP_002634132.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_002634133.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002634134.1 (Q9ZDX0) 2345-tetrahydropyridine-26-dicarboxylate N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase),InterPro: Bacterial transferase hexapeptide repeat; Hypothetical protein YP_002634135.1 (P54970) IAA-amino acid hydrolase homolog 2 precursor,InterPro: Peptidase M20/M25/M40; Hypothetical protein YP_002634136.1 (Q99U86) Alanine racemase 2 (EC 5.1.1.1),InterPro: Protein of unknown function UPF0001; Hypothetical protein YP_002634137.1 (P23630) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP decarboxylase),InterPro: Diaminopimelate decarboxylase; Hypothetical protein YP_002634138.1 (P62169) Cold shock-like protein cspC,InterPro: Cold-shock DNA-binding domain; Hypothetical protein YP_002634139.1 Hypothetical protein YP_002634140.1 catalyzes the hydrolysis of acylphosphate YP_002634141.1 (P37467) XpaC protein; Hypothetical protein YP_002634142.1 (Q8CP87) TelA-like protein SE1089,InterPro: Toxic anion resistance; Hypothetical protein YP_002634143.1 (P39074) Protein bmrU,InterPro: Conserved hypothetical protein 147; Hypothetical protein YP_002634144.1 (O34545) Branched-chain amino acid transport system carrier protein braB (Branched-chain amino acid uptake carrier braB),InterPro: Branched-chain amino acid transport system II carrier protein; Hypothetical protein YP_002634145.1 InterPro: von Willebrand factor type A; Hypothetical protein YP_002634146.1 (Q02441) Denitrification regulatory protein nirQ,InterPro: AAA ATPase; Hypothetical protein YP_002634147.1 (Q61703) Inter-alpha-trypsin inhibitor heavy chain H2 precursor (ITI heavy chain H2) (Inter-alpha-inhibitor heavy chain 2); Hypothetical protein YP_002634148.1 Hypothetical protein YP_002634149.1 Hypothetical protein YP_002634150.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA YP_002634151.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_002634152.1 (O34638) Hypothetical sensor-like histidine kinase ykoH (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634153.1 (O78428) Probable transcriptional regulator ycf27 (OmpR-like protein),InterPro: Response regulator receiver; Hypothetical protein YP_002634154.1 InterPro: PA-phosphatase related phosphoesterase; Hypothetical protein YP_002634155.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_002634156.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002634157.1 (Q55669) Carboxyl-terminal processing protease precursor (EC 3.4.21.102),InterPro: Carboxyl-terminal protease; Hypothetical protein YP_002634158.1 Hypothetical protein YP_002634159.1 (Q8CP79) PTS system glucose-specific IIA component (EIIA-Glc) (Glucose-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Glc),InterPro: Sugar-specific permease EIIA 1 domain; Hypothetical protein YP_002634160.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress YP_002634161.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_002634162.1 (Q8NWR0) Hypothetical UPF0230 protein MW1315,InterPro: DegV; Hypothetical protein YP_002634163.1 (Q59908) Dihydrofolate reductase (EC 1.5.1.3) (DHFR),InterPro: Dihydrofolate reductase; Hypothetical protein YP_002634164.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_002634165.1 (P54170) Hypothetical protein yphP; Hypothetical protein YP_002634166.1 (P54169) Hypothetical protein ypgR,InterPro: PBS lyase HEAT-like repeat; Hypothetical protein YP_002634167.1 (P54163) Hypothetical protein ypdP,InterPro: Protein of unknown function DUF165; Hypothetical protein YP_002634168.1 (P54162) 14.7 kDa ribonuclease H-like protein,InterPro: RNase H; Hypothetical protein YP_002634169.1 (P52026) DNA polymerase I (EC 2.7.7.7) (POL I),InterPro: 5-3 exonuclease,Similar to N-terminal part of DNA PolI (responsible for 5'-3'-exonucleolytic activity); Hypothetical protein YP_002634170.1 (P54159) Hypothetical protein ypbR; Hypothetical protein YP_002634171.1 (P27844) Protein rarD,InterPro: RarD protein; Hypothetical protein YP_002634172.1 (P44524) Hypothetical UPF0020/UPF0064 protein HI0116,InterPro: Putative RNA methylase; Hypothetical protein YP_002634173.1 (P50839) Hypothetical protein ypsB,InterPro: DivIVA (only 75% aligned); Hypothetical protein YP_002634174.1 (P50838) Hypothetical protein ypsA,Weak SD sequence; Hypothetical protein YP_002634175.1 (P53273) Hypothetical 117.0 kDa protein in ASN2-PHB1 intergenic region; Hypothetical protein YP_002634176.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC YP_002634177.1 (P39793) Penicillin-binding protein 1A/1B (PBP1) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)],InterPro: Penicillin-binding protein transpeptidase domain; Hypothetical protein YP_002634178.1 Hypothetical protein YP_002634179.1 (P39788) Probable endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase),InterPro: Endonuclease III/Nth; Hypothetical protein YP_002634180.1 (P39787) DNA replication protein dnaD,InterPro: DnaD and phage-associated domain; Hypothetical protein YP_002634181.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002634182.1 (P54394) Probable ATP-dependent helicase dinG homolog,InterPro: DnaQ exonuclease/DinG helicase; Hypothetical protein YP_002634183.1 (P42975) BirA bifunctional protein [Includes: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase (EC 6.3.4.15) (Biotin--protein ligase)],InterPro: Biotin--acetyl-CoA-carboxylase ligase; Hypothetical protein YP_002634184.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity YP_002634185.1 (P42982) Putative glycosyl transferase ypjH (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein YP_002634186.1 (P42979) Hypothetical protein ypjD,InterPro: MazG family protein; Hypothetical protein YP_002634187.1 InterPro: Putative neutral zinc metallopeptidase 2; Hypothetical protein YP_002634188.1 (P54392) Hypothetical protein ypjA; Hypothetical protein YP_002634189.1 (Q99U27) Hypothetical UPF0302 protein SAV1462/SA1295/MW1352; Hypothetical protein YP_002634190.1 (P54389) Hypothetical protein ypiA,InterPro: TPR repeat; Hypothetical protein YP_002634191.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002634192.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_002634193.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002634194.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_002634195.1 (P31114) Heptaprenyl diphosphate synthase component II (EC 2.5.1.30) (HEPPP synthase subunit 2) (Spore germination protein C3),InterPro: Polyprenyl synthetase; Hypothetical protein YP_002634196.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone YP_002634197.1 (P31112) Heptaprenyl diphosphate synthase component I (EC 2.5.1.30) (HEPPP synthase subunit 1) (Spore germination protein C1),Only weak similarity to similar to component A of hexaprenyl diphosphate synthase!; Hypothetical protein YP_002634198.1 (P02346) DNA-binding protein HU (DNA-binding protein II) (HB),InterPro: Histone-like bacterial DNA-binding protein; Hypothetical protein YP_002634199.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_002634200.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002634201.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_002634202.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_002634203.1 (P30363) L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase) (L-ASNase),InterPro: Asparaginase/glutaminase; Hypothetical protein YP_002634204.1 (P50736) Hypothetical protein ypdA,InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein YP_002634205.1 InterPro: Peptidoglycan-binding LysM; Hypothetical protein YP_002634206.1 (P50729) ATP-dependent DNA helicase recQ (EC 3.6.1.-) (Recombination protein S),InterPro: ATP-dependent DNA helicase RecQ,Similar to C-terminal part of E.coli RecQ; Hypothetical protein YP_002634207.1 (P50728) Hypothetical protein ypbB; Hypothetical protein YP_002634208.1 (P10245) Ferredoxin,InterPro: 3Fe-4S ferredoxin; Hypothetical protein YP_002634209.1 (P50726) Hypothetical protein ypaA; Hypothetical protein YP_002634210.1 (P35164) Sensor protein resE (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634211.1 (P35163) Transcriptional regulatory protein resD,InterPro: Response regulator receiver; Hypothetical protein YP_002634212.1 (Q8ZP51) Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase Rsu; Hypothetical protein YP_002634213.1 (Q7ZAJ3) Segregation and condensation protein B,InterPro: Conserved hypothetical protein 281,Similar to segregation and condensation protein B of B. subtilis:,Score = 116 bits (291), Expect = 2e-26,Identities = 77/181 (42%), Positives = 109/181 (60%), Gaps = 15/181 (8%); Hypothetical protein YP_002634214.1 (P60223) Segregation and condensation protein A,InterPro: Protein of unknown function DUF173,Similar to segregation and condensation protein A of B. subtilis:,Score = 167 bits (422), Expect = 7e-67,Identities = 103/241 (42%), Positives = 158/241 (65%),Gaps = 7/241 (2%); Hypothetical protein YP_002634215.1 (P17617) Hypothetical protein ypuF (ORFX6),InterPro: Protein of unknown function DUF309; Hypothetical protein YP_002634216.1 (Q7ZAJ2) Tyrosine recombinase xerD,InterPro: Phage integrase; Hypothetical protein YP_002634217.1 (P54574) Ferric uptake regulation protein (Ferric uptake regulator),InterPro: Ferric-uptake regulator; Hypothetical protein YP_002634218.1 (P54570) ADP-ribose pyrophosphatase (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (ASPPase),InterPro: NUDIX hydrolase; Hypothetical protein YP_002634219.1 (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-),InterPro: Aldo/keto reductase; Hypothetical protein YP_002634220.1 (P54554) Hypothetical oxidoreductase yqjQ (EC 1.-.-.-),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002634221.1 (P54552) Pyrroline-5-carboxylate reductase 2 (EC 1.5.1.2) (P5CR 2) (P5C reductase 2),InterPro: Delta 1-pyrroline-5-carboxylate reductase; Hypothetical protein YP_002634222.1 (Q8NWE6) Ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNA 3 endonuclease),InterPro: Beta-lactamase-like; Hypothetical protein YP_002634223.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_002634224.1 InterPro: Helix-turn-helix AraC type; Hypothetical protein YP_002634225.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_002634226.1 Interpro: Peptidase_M20; Hypothetical protein YP_002634227.1 Weak Shine-Dalgarno sequence!; Hypothetical protein YP_002634228.1 (P54538) Hypothetical protein yqjA; Hypothetical protein YP_002634229.1 (P54534) Hypothetical protein yqiW; Hypothetical protein YP_002634230.1 (P37942) Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) (Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase) (E2) (Dihydrolipoamide branched chain transacylase),InterPro: Catalytic domain of components of various dehydrogenase complexes; Hypothetical protein YP_002634231.1 (P37941) 2-oxoisovalerate dehydrogenase beta subunit (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta),InterPro: Transketolase central region; Hypothetical protein YP_002634232.1 (P37940) 2-oxoisovalerate dehydrogenase alpha subunit (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) (BCKDH E1-alpha),InterPro: Dehydrogenase E1 component; Hypothetical protein YP_002634233.1 (P54533) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of branched-chain alpha-keto acid dehydrogenase complex) (LPD-Val) (Dihydrolipoamide dehydrogenase),InterPro: Dihydrolipoamide dehydrogenase; Hypothetical protein YP_002634234.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_002634235.1 (Q05624) Phosphate butyryltransferase (EC 2.3.1.19) (Phosphotransbutyrylase),InterPro: Phosphate acetyl/butaryl transferase; Hypothetical protein YP_002634236.1 (P17894) DNA repair protein recN (Recombination protein N),InterPro: DNA repair protein RecN; Hypothetical protein YP_002634237.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_002634238.1 (Q08291) Geranyltranstransferase (EC 2.5.1.10) (Farnesyl-diphosphate synthase) (FPP synthase),InterPro: Polyprenyl synthetase; Hypothetical protein YP_002634239.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_002634240.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_002634241.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_002634242.1 (P54519) Hypothetical protein yqhY,InterPro: Protein of unknown function DUF322; Hypothetical protein YP_002634243.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism YP_002634244.1 (Q9PKR5) Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP),InterPro: Acetyl-CoA biotin carboxyl carrier; Hypothetical protein YP_002634245.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002634246.1 (P54518) Putative peptidase yqhT (EC 3.4.-.-),InterPro: Metallopeptidase M24; Hypothetical protein YP_002634247.1 (P13103) Hemagglutinin precursor [Contains: Hemagglutinin HA1 chain; Hemagglutinin HA2 chain]; Hypothetical protein YP_002634248.1 (Q8DQ94) DNA translocase ftsK; Hypothetical protein YP_002634249.1 (P54511) Hypothetical protein yqhM,InterPro: Biotin/lipoate A/B protein ligase domain; Hypothetical protein YP_002634250.1 (P54510) Hypothetical protein yqhL,InterPro: Rhodanese-like; Hypothetical protein YP_002634251.1 (Q9K936) Probable glycine dehydrogenase [decarboxylating] subunit 2 (EC 1.4.4.2) (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2),similar to C-terminus of glycine dehydrogenase subunit 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305]; Hypothetical protein YP_002634252.1 (Q8NWD0) Probable glycine dehydrogenase [decarboxylating] subunit 2 (EC 1.4.4.2) (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2),note: similar to N-terminus of glycine dehydrogenase subunit 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (BAE18365); Hypothetical protein YP_002634253.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_002634254.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_002634255.1 (Q99TV6) Shikimate kinase (EC 2.7.1.71) (SK),InterPro: Shikimate kinase,Similar to AroK of E. coli:,Score = 73.9 bits (180), Expect = 2e-13,Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 3/149 (2%); Hypothetical protein YP_002634256.1 No detectable SD sequence,Signal peptide predicted by SignalP3.0; Hypothetical protein YP_002634257.1 (Q8VQ71) ComG operon protein 3 homolog precursor (Late competence protein comGC),InterPro: Bacterial general secretion pathway protein G; Hypothetical protein YP_002634258.1 (P25954) ComG operon protein,InterPro: Bacterial type II secretion system protein; Hypothetical protein YP_002634259.1 (P25953) ComG operon protein,InterPro: Bacterial type II secretion system protein E; Hypothetical protein YP_002634260.1 (P54501) Hypothetical protein yqgX,InterPro: Beta-lactamase-like; Hypothetical protein YP_002634261.1 (Q56200) Hypothetical UPF0045 protein in glkA 3region (ORF2) (S. xylosus C2A),InterPro: Protein of unknown function DUF77; Hypothetical protein YP_002634262.1 (Q56198) Glucokinase (EC 2.7.1.2) (Glucose kinase),InterPro: ROK family protein (putative glucokinase); Hypothetical protein YP_002634263.1 (P54494) Hypothetical protein yqgQ; Hypothetical protein YP_002634264.1 (P54493) Hypothetical protein yqgP,InterPro: Rhomboid-like protein; Hypothetical protein YP_002634265.1 (Q9D110) 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) (510-methenyl-tetrahydrofolate synthetase) (Methenyl-THF synthetase) (MTHFS),InterPro: 5-formyltetrahydrofolate cyclo-ligase; Hypothetical protein YP_002634266.1 (P54488) Hypothetical protein yqgF,InterPro: Penicillin-binding protein transpeptidase domain,Homolog to penicillin-binding protein Pbp2b [Staphylococcus aureus]:,Score = 1046 bits (2704), Expect = 0.0,Identities = 515/678 (75%), Positives = 588/678 (85%); Hypothetical protein YP_002634268.1 (P54204) Ferric uptake regulation protein (Ferric uptake regulator),InterPro: Ferric-uptake regulator; Hypothetical protein YP_002634269.1 (Q56955) Chelated iron transport system membrane protein yfeD,InterPro: ABC transporter family 3; Hypothetical protein YP_002634270.1 (Q9XDA6) Zinc uptake system ATP-binding protein zurA,InterPro: ABC transporter; Hypothetical protein YP_002634271.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues YP_002634272.1 (P44586) Cold-shock DEAD-box protein A homolog (ATP-dependent RNA helicase deaD homolog),InterPro: DEAD/DEAH box helicase; Hypothetical protein YP_002634273.1 (Q99TT7) Hypothetical UPF0135 protein SAV1559/SA1388,InterPro: Protein of unknown function DUF34; Hypothetical protein YP_002634274.1 COG2384 Predicted SAM-dependent methyltransferase,(P54471) Hypothetical protein yqfN; Hypothetical protein YP_002634275.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium YP_002634276.1 (O05338) DNA primase (EC 2.7.7.-),InterPro: DNA primase; Hypothetical protein YP_002634277.1 (Q8CSD7) Hypothetical UPF0085 protein SE1250,InterPro: Protein of unknown function DUF299; Hypothetical protein YP_002634278.1 (Q9LEV3) Protein At5g10860 mitochondrial precursor,InterPro: CBS domain,Similar to C-terminal part of CBS domain protein of Staphylococcus epidermidis (strain ATCC 35984 / RP62A) [TaxID:176279] (Q5HNY4),According to similarity, truncation of about 41 aa.; Hypothetical protein YP_002634279.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002634280.1 (P42095) DNA repair protein recO (Recombination protein O),InterPro: Recombination protein O RecO; Hypothetical protein YP_002634281.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_002634282.1 (Q9S3M0) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase) (CDA),InterPro: Cytidine deaminase homotetrameric; Hypothetical protein YP_002634283.1 (Q05888) Diacylglycerol kinase (EC 2.7.1.107) (DAGK) (Diglyceride kinase) (DGK),InterPro: Prokaryotic diacylglycerol kinase; Hypothetical protein YP_002634284.1 (Q99TS6) Hypothetical UPF0054 protein SAV1570/SA1399,InterPro: Protein of unknown function UPF0054; Hypothetical protein YP_002634285.1 Hypothetical protein YP_002634286.1 Hypothetical protein YP_002634287.1 (P54466) Hypothetical protein yqfA,Signal peptide prediction by SignalP 3.0 (cleavage between 33 and 34); Hypothetical protein YP_002634288.1 (P54465) Hypothetical protein yqeZ; Hypothetical protein YP_002634289.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002634290.1 (P54462) Hypothetical UPF0004 protein yqeV,InterPro: Protein of unknown function UPF0004; Hypothetical protein YP_002634291.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_002634292.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_002634293.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_002634294.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_002634295.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_002634296.1 (Q9F1W4) Heat-inducible transcription repressor hrcA,InterPro: Negative regulator of class I heat shock protein; Hypothetical protein YP_002634297.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_002634298.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002634299.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002634300.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA YP_002634301.1 (P44408) Recombination protein,Similar to C-terminal part of protein similar to similar to late competence protein ComEC [Staphylococcus aureus subsp. aureus Mu50] (BAB57750); Hypothetical protein YP_002634302.1 (P39695) ComE operon protein,InterPro: ComEC/Rec2-related protein,Similar to N-terminal part of protein similar to ComEC late competence protein 3 of Staphylococcus haemolyticus (strain JCSC1435) [TaxID:279808] (Q4L6T9); Hypothetical protein YP_002634303.1 (P32393) ComE operon protein,InterPro: Cytidine/deoxycytidylate deaminase zinc-binding region; Hypothetical protein YP_002634304.1 (P39694) ComE operon protein,InterPro: Competence protein ComEA helix-hairpin-helix region; Hypothetical protein YP_002634305.1 (P54458) Hypothetical protein yqeM,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein YP_002634306.1 (P05848) Hypothetical protein ybeB,InterPro: Iojap-related protein; Hypothetical protein YP_002634307.1 (P54456) Hypothetical protein yqeK,InterPro: Conserved hypothetical protein 488; Hypothetical protein YP_002634308.1 (Q8CSC1) Probable nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase),InterPro: Probable nicotinate-nucleotide adenylyltransferase; Hypothetical protein YP_002634309.1 (P54454) Hypothetical UPF0044 protein yqeI,InterPro: Protein of unknown function UPF0044,Crystal structure of E. coli YhbY has been determined. A role in translation is postulated.; Hypothetical protein YP_002634310.1 (Q8CP09) Shikimate 5-dehydrogenase (EC 1.1.1.25),InterPro: Shikimate 5-dehydrogenase,Similar to AroE of E. coli:,Score = 126 bits (316), Expect = 7e-29,Identities = 94/275 (34%), Positives = 142/275 (51%),Gaps = 22/275 (8%); Hypothetical protein YP_002634311.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis YP_002634312.1 (P54452) Hypothetical protein yqeG,InterPro: HAD-superfamily hydrolase subfamily IIIA; Hypothetical protein YP_002634313.1 (P45113) MTA/SAH nucleosidase (5-methylthioadenosine nucleosidase) (EC 3.2.2.16) (S-adenosylhomocysteine nucleosidase) (EC 3.2.2.9),InterPro: Purine and other phosphorylases family 1,Similar to MtnN of B. subtilis:,>MTNN_BACSU,Length = 231,Score = 207 bits (526), Expect = 4e-73,Identities = 109/228 (47%),Positives = 165/228 (72%), Gaps = 1/228 (0%); Hypothetical protein YP_002634314.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_002634315.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor YP_002634316.1 (P44700) Putative protease HI0419 (EC 3.4.-.-),InterPro: Peptidase U32,Similar to N-terminal part of putative peptidase [Staphylococcus aureus subsp. aureus MSSA476] (CAG43349),Due to sequence similarity, about 57 aa are missing at the C-terminus.; Hypothetical protein YP_002634317.1 (P44700) Putative protease HI0419 (EC 3.4.-.-),InterPro: Peptidase U32; Hypothetical protein YP_002634318.1 (Q00719) O-methyltransferase (EC 2.1.1.-),InterPro: O-methyltransferase family 3; Hypothetical protein YP_002634319.1 (O43309) Zinc finger protein; Hypothetical protein YP_002634320.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_002634321.1 (Q7WY61) Hypothetical UPF0297 protein yrzL; Hypothetical protein YP_002634322.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002634323.1 (Q58914) Hypothetical protein MJ1519,InterPro: Helicase RecD/TraA; Hypothetical protein YP_002634324.1 InterPro: TPR repeat; Hypothetical protein YP_002634325.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002634326.1 (Q8ZN40) Cysteine desulfurase (EC 2.8.1.7) (ThiI transpersulfidase) (NifS protein homolog),InterPro: Aminotransferase class V,Similar to E. coli IscS:,>ISCS_ECOLI,Length = 404,Score = 293 bits (749),Expect = 1e-165,Identities = 167/383 (43%), Positives = 232/383 (60%), Gaps = 8/383 (2%); Hypothetical protein YP_002634327.1 (P45529) Hypothetical protein yhbW,InterPro: Bacterial luciferase; Hypothetical protein YP_002634328.1 InterPro: CsbD-like; Hypothetical protein YP_002634329.1 Hypothetical protein YP_002634330.1 (O69219) Hypothetical UPF0074 protein (ORF2),InterPro: Protein of unknown function UPF0074; Hypothetical protein YP_002634331.1 (P45262) Hypothetical protein HI1590,InterPro: AAA ATPase central region; Hypothetical protein YP_002634332.1 (O13861) Hypothetical protein C1A6.10 in chromosome I,InterPro: UBA/THIF-type NAD/FAD binding fold; Hypothetical protein YP_002634333.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_002634334.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_002634335.1 orf in full length conserved in staphylococci,local similarity to N-acetylmuramoyl-L-alanine amidase cwlB [Precursor],(EC 3.5.1.28), lytC, Bacillus subtilis, 496AA,201AA aligned, Expect = 2e-15, Identities = 59/198 (29%),Positives = 94/198 (47%), Gaps = 16/198 (8%),(Q02114) N-acetylmuramoyl-L-alanine amidase cwlB precursor (EC 3.5.1.28) (Cell wall hydrolase) (Autolysin),InterPro: Cell wall hydrolase/autolysin; Hypothetical protein YP_002634336.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_002634337.1 orf in full length conserved in staphylococci,,similar to GTP pyrophosphokinase relA (EC 2.7.6.5), Corynebacterium glutamicum (Brevibacterium flavum), 760AA, Expect = 1e-166, Identities = 287/726 (39%), Positives = 464/726 (63%), Gaps = 14/726 (1%),(O32419) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP 3-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase),InterPro: RelA/SpoT protein; Hypothetical protein YP_002634338.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002634339.1 orf in full length conserved in staphylococci,N-terminal region is similar to single-stranded-DNA-specific exonuclease recJ (EC 3.1.-.-), Escherichia coli, 577AA,Expect = 0.0, Identities = 186/582 (31%), Positives = 301/582 (51%), Gaps = 40/582 (6%),(P21893) Single-stranded-DNA-specific exonuclease recJ (EC 3.1.-.-),InterPro: Bacterial RecJ exonuclease; Hypothetical protein YP_002634340.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_002634341.1 (Q9KDI4) Hypothetical UPF0092 protein BH1229,InterPro: YajC; Hypothetical protein YP_002634342.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_002634343.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_002634344.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002634345.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002634346.1 similar to Bacillus subtilis possible chorismate mutase,(Q8CNZ8) ACT domain protein pheB,InterPro: Predicted ligand-binding protein with an ACT domain; Hypothetical protein YP_002634347.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_002634348.1 involved in the peptidyltransferase reaction during translation YP_002634349.1 (P26942) Hypothetical protein ysxB,InterPro: Protein of unknown function DUF464; Hypothetical protein YP_002634350.1 Hypothetical protein YP_002634351.1 orf conserved in staphylococci,,similar to Rod shape-determining protein mreD/rodB,Bacillus subtilis,172AA, Expect = 3e-41, Identities = 40/165 (24%),Positives = 72/165 (43%),(Q01467) Rod shape-determining protein mreD,InterPro: Rod shape-determining protein MreD; Hypothetical protein YP_002634352.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_002634353.1 Hypothetical protein YP_002634354.1 conserved in staphylococci; Hypothetical protein YP_002634355.1 Hypothetical protein YP_002634356.1 similar to DNA repair protein radC, Escherichia coli, 222AA, Expect = 1e-33, Identities = 78/212 (36%),Positives = 124/212 (58%), (Q8NW77) DNA repair protein radC homolog,InterPro: DNA repair protein RadC; Hypothetical protein YP_002634357.1 no Shine Dalgarno sequence, no complete alignments,(Q56740) Type 4 prepilin-like proteins leader peptide processing enzyme [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)],InterPro: Prepilin cysteine protease (C20) type IV; Hypothetical protein YP_002634358.1 similar to C-terminus of folylpolyglutamate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_301192),(Q05865) Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS),InterPro: Cytoplasmic peptidoglycan synthetases C-terminal; Hypothetical protein YP_002634359.1 similar to N terminus folylpolyglutamate synthase folC (EC 6.3.2.17),Bacillus subtilis, 430AA, Expect = 2e-65, Identities = 129/257 (50%), Positives = 172/257 (66%),Gaps = 6/257 (2%) ,(Q05865) Folylpolyglutamate synthase (EC 6.3.2.17) (Folylpoly-gamma-glutamate synthetase) (FPGS),InterPro: Folylpolyglutamate synthetase,Similar to N-terminal part of folylpolyglutamate synthase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_301192); Hypothetical protein YP_002634360.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_002634361.1 similar to DNA-3-methyladenine glycosylase I, tag,(EC 3.2.2.20), Escherichia coli, 187AA, Expect = 3e-97,Identities = 79/183 (43%), Positives = 118/183 (64%) ,(P05100) DNA-3-methyladenine glycosylase I (EC 3.2.2.20) (3-methyladenine-DNA glycosylase I constitutive) (TAG I) (DNA-3-methyladenine glycosidase I),InterPro: Methyladenine glycosylase; Hypothetical protein YP_002634362.1 similar to pyrrolidone-carboxylate peptidase pcp (EC 3.4.19.3),Bacillus amyloliquefaciens, 215AA, Expect = 2e-47, Identities = 101/215 (46%), Positives = 139/215 (64%), Gaps = 6/215 (2%),(Q8XKH1) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase),InterPro: Pyrrolidone-carboxylate/pyroglutamyl peptidase I (C15); Hypothetical protein YP_002634363.1 (P75747) AbrB protein (AidB regulator),InterPro: Putative ammonia monooxygenase; Hypothetical protein YP_002634364.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002634365.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002634366.1 conserved in staphylococci,similar to uroporphyrinogen III cosynthase Bacillus subtilis subsp. subtilis, 262AA, 190AA aligned, Expect = 6e-09, Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 12/190,similar to C terminal porphyrin biosynthesis protein hemD, Clostridium josui, 504AA, Expect = 3e-12,Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 25/223 (11%) ,(Q59294) Porphyrin biosynthesis protein HEMD [Includes: Uroporphyrin-III C-methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM); Uroporphyrinogen-III synthase (EC 4.2.1.75) (UROS) (Uroporphyrin,InterPro: Uroporphyrinogen III synthase HEM4; Hypothetical protein YP_002634367.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_002634368.1 similar to Protein hemX, Bacillus subtilis, 276AA,Expect = 4e-71,Identities = 88/272 (32%), Positives = 152/272 (55%), (P16645) Protein hemX,InterPro: Cytochrome c assembly protein; Hypothetical protein YP_002634369.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_002634370.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_002634371.1 binds and unfolds substrates as part of the ClpXP protease YP_002634372.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_002634373.1 (Q9HGN1) Probable serine/threonine-protein kinase C36B7.09 (EC 2.7.11.1); Hypothetical protein YP_002634374.1 (P50619) Hypothetical protein ymaB,InterPro: NUDIX hydrolase; Hypothetical protein YP_002634375.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002634376.1 similar to 50S ribosomal protein L35 rpmI, Bacillus stearothermophilus, ,(Q99TI2) 50S ribosomal protein L35,InterPro: Ribosomal protein L35; Hypothetical protein YP_002634377.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_002634378.1 similar to lysine-specific permease lysP,Escherichia coli, 488AA, Expect = 1e-133, Identities = 262/491 (53%), Positives = 346/491 (70%), Gaps = 17/491 (3%),(P48813) High-affinity glutamine permease,InterPro: Amino acid permease-associated region; Hypothetical protein YP_002634379.1 Hypothetical protein YP_002634380.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002634381.1 Primosomal protein that may act to load helicase DnaC during DNA replication YP_002634382.1 similar to replication initiation and membrane attachment protein dnaB, Bacillus subtilis, 472AA, Expect = 1e-157, Identities = 139/485 (28%), Positives = 238/485 (49%), Gaps = 58/485 (11%),(P07908) Replication initiation and membrane attachment protein; Hypothetical protein YP_002634383.1 (Q8CS73) Hypothetical UPF0168 protein SE1360,InterPro: Protein of unknown function DUF193; Hypothetical protein YP_002634384.1 (Q99TH5) Glyceraldehyde 3-phosphate dehydrogenase 2 (EC 1.2.1.12) (GAPDH 2),InterPro: Glyceraldehyde 3-phosphate dehydrogenase; Hypothetical protein YP_002634385.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_002634386.1 similar to formamidopyrimidine-DNA glycosylase mutM, (EC 4.2.99.18), Escherichia coli, 876AA, Expect = 0.0, Identities = 471/877 (53%), Positives = 619/877 (70%), Gaps = 7/877 (0%),(P05523) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (FAPY-DNA glycosylase),InterPro: Formamidopyrimidine-DNA glycolase; Hypothetical protein YP_002634387.1 similar to DNA polymerase I polA, (EC 2.7.7.7),Bacillus stearothermophilus, 876AA, Expect = 0.0,Identities = 471/877 (53%), Positives = 619/877 (70%),Gaps = 7/877 (0%),(O34996) DNA polymerase I (EC 2.7.7.7) (POL I),InterPro: DNA polymerase family A; Hypothetical protein YP_002634388.1 similar to alkaline phosphatase synthesis sensor protein phoR, (EC 2.7.3.-), Bacillus subtilis, 579AA,Expect = 1e-72, Identities = 188/571 (32%), Positives = 305/571 (53%), Gaps = 17/571 (2%),(P23545) Alkaline phosphatase synthesis sensor protein phoR (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634389.1 similar to alkaline phosphatase synthesis transcriptional regulatory protein phoP, Bacillus subtilis, 240AA, Expect = 2e-75, Identities = 161/237 (67%), Positives = 194/237 (81%), Gaps = 2/237 (0%),(P13792) Alkaline phosphatase synthesis transcriptional regulatory protein phoP,InterPro: Response regulator receiver; Hypothetical protein YP_002634390.1 Converts isocitrate to alpha ketoglutarate YP_002634391.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate YP_002634392.1 similar to D-serine/D-alanine/glycine transporter cycA, Escherichia coli, 470AA, Expect = 1e-127, Identities = 231/441 (52%), Positives = 327/441 (74%), Gaps = 2/441 (0%),InterPro: Amino acid permease-associated region; Hypothetical protein YP_002634393.1 similar to Pyruvate kinase pyk, (EC 2.7.1.40),Bacillus stearothermophilus, 587AA, Expect = 0.0,Identities = 357/585 (61%), Positives = 448/585 (76%),(P51182) Pyruvate kinase (EC 2.7.1.40) (PK),InterPro: Pyruvate kinase; Hypothetical protein YP_002634394.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_002634395.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_002634396.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits YP_002634397.1 similar to NAD-dependent malic enzyme (EC 1.1.1.38), Bacillus stearothermophilus, 478AA, Expect = 1e-116, Identities = 227/395 (57%), Positives = 277/395 (70%), Gaps = 4/395 (1%) ,(O34962) Probable NAD-dependent malic enzyme 4 (EC 1.1.1.38) (NAD-ME 4),InterPro: Malic oxidoreductase; Hypothetical protein YP_002634398.1 (Q8CNX0) DNA polymerase III alpha subunit (EC 2.7.7.7),InterPro: DNA polymerase III alpha subunit; Hypothetical protein YP_002634399.1 (Q49428) Hypothetical protein MG371,InterPro: Phosphoesterase RecJ-like; Hypothetical protein YP_002634400.1 (O58045) Inosine-5-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD),InterPro: CBS domain; Hypothetical protein YP_002634401.1 (P42297) Hypothetical protein yxiE precursor,InterPro: Usp domain; Hypothetical protein YP_002634402.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins YP_002634403.1 similar to Xaa-Pro dipeptidase pepQ, EC 3.4.13.9,Lactobacillus delbrueckii (subsp. lactis), 368AA, Expect = 3e-72, Identities = 146/356 (41%), Positives = 210/356 (58%), Gaps = 8/356 (2%),(P46545) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase) (Proline dipeptidase) (Prolidase) (Imidodipeptidase),InterPro: Metallopeptidase M24; Hypothetical protein YP_002634404.1 similar to alanine dehydrogenase ald (EC 1.4.1.1),Bacillus stearothermophilus, 372AA, Expect = 1e-159,Identities = 243/371 (65%), Positives = 288/371 (77%),Gaps = 2/371 (0%),(Q8NW54) Alanine dehydrogenase 2 (EC 1.4.1.1),InterPro: Alanine dehydrogenase and pyridine nucleotide transhydrogenase; Hypothetical protein YP_002634405.1 (Q57951) Hypothetical protein MJ0531,InterPro: Usp domain; Hypothetical protein YP_002634406.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_002634407.1 (P37876) Hypothetical protein ytxK; Hypothetical protein YP_002634408.1 similar to thiol peroxidase tpx, (EC 1.11.1.-),Escherichia coli,,167AA, Expect = 3e-32, Identities = 73/165 (44%), Positives = 108/165 (65%), Gaps = 7/165 (4%),(Q99TF0) Probable thiol peroxidase (EC 1.11.1.-),InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Hypothetical protein YP_002634409.1 (P46490) Hypothetical protein HI0198,InterPro: Protein of unknown function DUF81; Hypothetical protein YP_002634410.1 (Q8NW49) Probable thiamine biosynthesis protein thiI,InterPro: Thiamine biosynthesis protein,Similar to C-terminus of thiamine biosynthesis protein ThiI [Staphylococcus epidermidis RP62A] (YP_188851); Hypothetical protein YP_002634411.1 (Q8CNW7) Probable thiamine biosynthesis protein thiI,Similar to N-terminus of putative thiamine biosynthesis ATP pyrophosphatase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_301138); Hypothetical protein YP_002634412.1 similar to Cysteine desulfurase iscS (EC 2.8.1.7),Escherichia coli, 404AA, Expect = 3e-53, Identities = 141/366 (38%), Positives = 211/366 (57%), Gaps = 12/366 (3%),(P31672) NifS/icsS protein homolog (Fragment),InterPro: Aminotransferase class V; Hypothetical protein YP_002634413.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation YP_002634414.1 (P76270) UPF0067 protein yebR,Similar to N-terminus of GAF domain protein [Staphylococcus epidermidis RP62A] (YP_188854); Hypothetical protein YP_002634415.1 (P76270) UPF0067 protein yebR,Similar to C-terminus of GAF domain protein [Staphylococcus epidermidis RP62A] (YP_188854); Hypothetical protein YP_002634416.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_002634417.1 orf in full length conserved in staphylococci,similar to C terminus Glycerophosphoryl diester phosphodiesterase glpQ,(EC 3.1.4.46) Bacillus subtilis, 293AA, Expect = 4e-82, Identities = 79/255 (30%), Positives = 146/255 (57%), Gaps = 15/255 (5%) ,(P37965) Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase),InterPro: Glycerophosphoryl diester phosphodiesterase; Hypothetical protein YP_002634418.1 low similarity to Organic hydroperoxide resistance protein ohrB (Bacillus subtilis),(P70736) Hypothetical 15.2 kDa protein in xcpR 3region (ORF2),InterPro: OsmC-like protein; Hypothetical protein YP_002634419.1 similar to soluble hydrogenase, small subunit, (EC 1.12.-.-), Synechococcus sp. (strain PCC 6716), 384AA,Expect = 1e-146, Identities = 140/383 (36%), Positives = 226/383 (59%), Gaps = 4/383 (1%) (P14776) Soluble hydrogenase small subunit (EC 1.12.-.-) (Tritium exchange subunit),InterPro: Aminotransferase class V; Hypothetical protein YP_002634420.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002634421.1 conserved in staphylococci,(Q9CKJ5) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGP); Hypothetical protein YP_002634422.1 full length conserved in staphylococci,,N terminal similar to PTS system, N-acetylglucosamine-specific IIABC component nagE,(EC 2.7.1.69) ,Escherichia coli, 648AA,Expect = 8e-87, Identities = 214/501 (42%), Positives = 301/501 (60%), Gaps = 53/501 (10%),(P09323) PTS system N-acetylglucosamine-specific IIABC component (EIIABC-Nag) (N-acetylglucosamine-permease IIABC component) (Phosphotransferase enzyme II ABC component) (EC 2.7.1.69) (EII-Nag),InterPro: Phosphotransferase system EIIC; Hypothetical protein YP_002634423.1 (Q42670) 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT),InterPro: Phospholipid/glycerol acyltransferase,1-acyl-sn-glycerol-3-phosphate acyltransferase; Hypothetical protein YP_002634424.1 ORF conserved in staphylococci.,C terminal similar to protease do [Precursor], (EC 3.4.21.-), ,degP,Escherichia coli, 474AA, Expect = 5e-44, Identities = 120/282 (42%), Positives = 170/282 (60%), Gaps = 18/282 (6%),(O34358) Probable serine protease do-like htrA (EC 3.4.21.-),InterPro: Peptidase S1 chymotrypsin family; Hypothetical protein YP_002634425.1 similar to tyrosyl-tRNA synthetase tyrS (EC 6.1.1.1), ,Bacillus stearothermophilus, 419AA, Expect = 0.0, Identities = 247/417 (59%), Positives = 313/417 (75%), Gaps = 1/417 (0%),(P00952) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS),InterPro: Tyrosyl-tRNA synthetase class Ib; Hypothetical protein YP_002634426.1 Similar to N terminal parts of PBP1B (several bacteria). Maybe truncated ORF.,(P02918) Penicillin-binding protein 1A (PBP-1a) (PBP1a) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Penicillin-sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)],InterPro: Glycosyl transferase family 51; Hypothetical protein YP_002634427.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate YP_002634428.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_002634429.1 similar to acetoin utilization protein acuA (EC 2.3.1.-),Bacillus subtilis, 210AA, Expect = 1e-122,Identities = 114/210 (54%), Positives = 144/210 (68%) ,(P39065) Acetoin utilization protein acuA (EC 2.3.1.-),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002634430.1 similar to acetoin utilization protein acuC,Bacillus subtilis, 387AA, Expect = 1e-99, Identities = 166/368 (45%), Positives = 241/368 (65%), Gaps = 1/368 (0%),(Q8NW34) Acetoin utilization protein acuC,InterPro: Histone deacetylase family; Hypothetical protein YP_002634431.1 High confidence in function and specificity YP_002634432.1 Hypothetical protein YP_002634433.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate YP_002634434.1 Hypothetical protein YP_002634435.1 (P40779) Hypothetical protein ytxG; Hypothetical protein YP_002634436.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_002634437.1 C terminus is similar to DNA translocase ftsK,Synonym: DNA translocase SpoIIIE, Bacillus subtilis,787AA, Expect = 1e-123, Identities = 245/508 (48%),Positives = 350/508 (68%), Gaps = 13/508 (2%) ,(Q8R5S4) DNA translocase ftsK,InterPro: Cell divisionFtsK/SpoIIIE protein; Hypothetical protein YP_002634438.1 (Q8EPH5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) (Phenylalanine--tRNA ligase beta chain) (PheRS),InterPro: t-RNA-binding region; Hypothetical protein YP_002634439.1 (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase subunit I); Hypothetical protein YP_002634440.1 (O14463) Thioredoxin (TR),InterPro: Thioredoxin domain 2; Hypothetical protein YP_002634441.1 similar to Glutamyl-aminopeptidase pepA, (EC 3.4.11.7),,Lactococcus lactis (subsp. cremoris) (Streptococcus cremoris), 355AA, Expect = 1e-70,Identities = 142/355 (40%), Positives = 208/355 (58%),Gaps = 8/355 (2%),(Q48677) Glutamyl-aminopeptidase (EC 3.4.11.7),InterPro: Peptidase M42; Hypothetical protein YP_002634442.1 conserved in staphylococci.,(Q9FIZ9) Putative aquaporin NIP4.1 (NOD26-like intrinsic protein 4.1); Hypothetical protein YP_002634443.1 Hypothetical protein YP_002634444.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_002634445.1 incomplete alignment to staphylococci conserved proteins,(P71392) LicA protein; Hypothetical protein YP_002634446.1 similar to D-alanine aminotransferase dat (EC 2.6.1.21), Bacillus sp. (strain YM-1), 283AA, Expect = 2e-74, Identities = 141/273 (51%), Positives = 182/273 (66%) ,(P54694) D-alanine aminotransferase (EC 2.6.1.21) (D-aspartate aminotransferase) (D-amino acid aminotransferase) (D-amino acid transaminase) (DAAT),InterPro: D-amino acid aminotransferase; Hypothetical protein YP_002634447.1 divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases YP_002634448.1 Hypothetical protein YP_002634449.1 similar to ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70), rsuA, Escherichia coli, 231AA,Expect = 2e-82, Identities = 96/232 (41%), Positives = 144/232 (62%), Gaps = 5/232 (2%),(P33918) Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) (16S pseudouridylate 516 synthase) (16S pseudouridine 516 synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase Rsu; Hypothetical protein YP_002634450.1 similar to Stage V sporulation protein B,spoVB,,Bacillus subtilis, 518 AA, Expect = 1e-128,Identities = 102/482 (21%), Positives = 208/482 (43%),Gaps = 32/482 (6%),and to Hypothetical protein yabM,Bacillus subtilis, 532 AA, Expect = 1e-118,Identities = 107/428 (25%), Positives = 203/428 (47%), Gaps = 23/428 (5%) ,(Q00758) Stage V sporulation protein B,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein YP_002634451.1 (Q9Z4P0) Fumarate reductase flavoprotein subunit precursor (EC 1.3.99.1) (Iron(III)-induced flavocytochrome C3) (Ifc3),InterPro: HI0933-like protein; Hypothetical protein YP_002634452.1 (P54433) Hypothetical UPF0033 protein yrkF,InterPro: Rhodanese-like; Hypothetical protein YP_002634453.1 (Q8CNU8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS),InterPro: Aminoacyl-tRNA synthetase class Ia,Similar to C-terminus of leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] (BAB57922); Hypothetical protein YP_002634454.1 (Q8CNU8) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS),InterPro: Aminoacyl-tRNA synthetase class Ia,Similar to N-terminus of leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] (BAB57922); Hypothetical protein YP_002634455.1 (P21191) Quinolone resistance protein norA,InterPro: Major facilitator superfamily; Hypothetical protein YP_002634456.1 (P45476) Hypothetical protein yhcC,InterPro: Conserved hypothetical protein 1212; Hypothetical protein YP_002634457.1 (O66128) Menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-),InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein YP_002634458.1 similar to L-lactate dehydrogenase ldh (EC 1.1.1.27), Staphylococcus epidermidis, 316AA, Expect = 1e-112, Identities = 209/309 (67%), Positives = 247/309 (79%),(Q8CMZ0) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH),InterPro: Lactate/malate dehydrogenase; Hypothetical protein YP_002634459.1 similar to lysophospholipase [Bacillus halodurans C-125], 260AA, Expect = 5e-44, Identities = 93/262 (35%),Positives = 145/262 (55%), Gaps = 3/262,(1%),(O35678) Monoglyceride lipase (EC 3.1.1.23),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002634460.1 similar to proline dehydrogenase [Bacillus halodurans C-125], 319AA, 280AA aligned, Expect = 2e-26,Identities = 73/280 (26%), Positives = 144/280 (51%), Gaps = 13/280 (4%),only local similarity to ,(P95629) Bifunctional putA protein [Includes: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) (P5C dehydrogenase)],InterPro: Proline dehydrogenase; Hypothetical protein YP_002634461.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_002634462.1 similar to Riboflavin biosynthesis protein ribA,(EC 3.5.4.25),,Bacillus subtilis, Expect = 1e-179, Identities = 214/396 (54%), Positives = 279/396 (70%), Gaps = 4/396 (1%),(P74104) Riboflavin biosynthesis protein ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 34-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)],InterPro: 34-Dihydroxy-2-butanone 4-phosphate synthase; Hypothetical protein YP_002634463.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_002634464.1 Riboflavin biosynthesis protein ribD (EC 3.5.4.26),,Bacillus subtilis, Expect = 7e-72, Identities = 148/353 (41%), Positives = 211/353 (59%), Gaps = 9/353 (2%), (P17618) Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)],InterPro: Riboflavin biosynthesis protein RibD; Hypothetical protein YP_002634465.1 conserved in staphylococci,(P77148) Hypothetical protein ydhS; Hypothetical protein YP_002634466.1 (P52081) Bifunctional autolysin precursor [Includes: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28); Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (EC 3.2.1.96)],InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Hypothetical protein YP_002634467.1 conserved in staphylococci; Hypothetical protein YP_002634468.1 no Shine Dalgarno sequence,InterPro: Sigma-70 region 2; Hypothetical protein YP_002634469.1 conserved in staphylococci; Hypothetical protein YP_002634470.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_002634471.1 conserved in staphylococci; Hypothetical protein YP_002634472.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_002634473.1 conserved in staphylococci,(Q8CS28) Protein crcB homolog,InterPro: Camphor resistance CrcB protein; Hypothetical protein YP_002634474.1 similar to ADP-ribosyl-[dinitrogen reductase] glycohydrolase (EC 3.2.2.24) draG, Rhodospirillum rubrum,Expect = 5e-98, Identities = 90/304 (29%), Positives = 134/304 (44%), Gaps = 47/304 (15%),(P14300) ADP-ribosyl-[dinitrogen reductase] glycohydrolase (EC 3.2.2.24) (ADP-ribosylglycohydrolase) (Dinitrogenase reductase activating glycohydrolase),InterPro: ADP-ribosylglycohydrolase; Hypothetical protein YP_002634475.1 similar to plant metabolite dehydrogenase,(O60218) Aldo-keto reductase family 1 member B10 (EC 1.1.1.-) (Aldose reductase-like) (ARL-1) (Small intestine reductase) (SI reductase) (Aldose reductase-related protein) (ARP) (hARP),InterPro: Aldo/keto reductase; Hypothetical protein YP_002634476.1 Similar to N-terminus (aa 5-40) of transposase for ISSha1 [Staphylococcus haemolyticus JCSC1435] (BAE03687): 438 aa; Hypothetical protein YP_002634477.1 Similar to C-terminal part (aa 41-438) of transposase for ISSha1 [Staphylococcus haemolyticus JCSC1435](BAE03687): 438 aa ,(Q06126) Transposase for insertion sequence element IS1001,InterPro: Transposase IS204/IS1001/IS1096/IS1165; Hypothetical protein YP_002634478.1 C terminal 250aa are similar to conserved proteins,(Q8CG48) Structural maintenance of chromosome 2-like 1 protein (Chromosome-associated protein E) (XCAP-E homolog) (FGF-inducible protein 16); Hypothetical protein YP_002634479.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002634480.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_002634481.1 (P39839) Probable peptidase yuxL (EC 3.4.21.-),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002634482.1 (P32090) Mutator mutT protein (78-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (EC 3.6.1.-) (dGTP pyrophosphohydrolase),InterPro: NUDIX hydrolase; Hypothetical protein YP_002634483.1 (Q8CS22) Hypothetical UPF0161 protein SE1462,InterPro: Protein of unknown function DUF37; Hypothetical protein YP_002634484.1 similar to O-succinylbenzoate synthase (EC 4.2.1.-), ,menC, Bacillus subtilis 492AA, only 335AA aligned,Expect = 3e-25, Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 35/335 (10%),(O34514) O-succinylbenzoate synthase (EC 4.2.1.-) (OSB synthase) (OSBS) (4-(2-carboxyphenyl)-4-oxybutyric acid synthase) (O-succinylbenzoic acid synthase); Hypothetical protein YP_002634485.1 similar to O-succinylbenzoate--CoA ligase menE, (EC 6.2.1.26), ,Staphylococcus aureus, Expect = 1e-163,Identities = 299/490 (61%), Positives = 355/490 (72%),Gaps = 31/490 (6%), (Q8NVZ4) O-succinylbenzoate--CoA ligase (EC 6.2.1.26) (OSB-CoA synthetase) (O-succinylbenzoyl-CoA synthetase),InterPro: AMP-dependent synthetase and ligase; Hypothetical protein YP_002634486.1 (P40798) Shuttle craft protein; Hypothetical protein YP_002634487.1 Hypothetical protein YP_002634488.1 (O14578) Citron protein (Rho-interacting serine/threonine kinase 21) (Fragment); Hypothetical protein YP_002634489.1 (P46326) Hypothetical protein yxbB,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein YP_002634490.1 (P39667) Hypothetical protein yrxA (ORF1),InterPro: 3H domain; Hypothetical protein YP_002634491.1 similar to Cysteine desulfurase nifS, (EC 2.8.1.7),Anabaena azollae 400AA, 379AA aligned, Expect = 1e-148 Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 13/379 (3%) ,(Q43884) Cysteine desulfurase (EC 2.8.1.7) (Nitrogenase metalloclusters biosynthesis protein nifS),InterPro: Aminotransferase class V; Hypothetical protein YP_002634492.1 similar to L-aspartate oxidase nadB, (EC 1.4.3.16),Bacillus subtilis,,only 393AA aligned, Expect = 2e-68,Identities = 155/400 (38%), Positives = 220/400 (55%),Gaps = 15/400 (3%),(Q929Z2) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate synthetase B),InterPro: Fumarate reductase/succinate dehydrogenase flavoprotein N-terminal; Hypothetical protein YP_002634493.1 Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]nadC,(EC 2.4.2.19), Bacillus subtilis,Expect = 1e-108, Identities = 128/276 (46%), Positives = 171/276 (61%),(P39666) Probable nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) (QAPRTase) (General stress protein 70) (GSP70),InterPro: Nicotinate-nucleotide pyrophosphorylase; Hypothetical protein YP_002634494.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_002634495.1 Hypothetical protein YP_002634496.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX YP_002634497.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_002634498.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_002634499.1 similar to signal transduction protein (Staphylococcus aureus),(P38049) Hypothetical protein yhgC; Hypothetical protein YP_002634500.1 similar to Protein ecsB, Bacillus subtilis, Expect = 1e-132, Identities = 101/367 (27%), Positives = 178/367 (48%), Gaps = 12/367 (3%),(P55340) Protein ecsB; Hypothetical protein YP_002634501.1 similar to ABC-type transporter ATP-binding protein ecsA,Synonyms: prsT,Bacillus subtilis, Expect = 1e-79,Identities = 140/238 (58%), Positives = 182/238 (76%) ,(P55339) ABC-type transporter ATP-binding protein ecsA,InterPro: ABC transporter; Hypothetical protein YP_002634502.1 (O07513) Hit protein,InterPro: Histidine triad (HIT) protein; Hypothetical protein YP_002634503.1 (Q38694) Agamous-like MADS box protein AGL9 homolog (OM1); Hypothetical protein YP_002634504.1 (Q9PKE3) Inner membrane protein oxaA; Hypothetical protein YP_002634505.1 similar to Foldase protein prsA 1 [Precursor] prsA1 (EC 5.2.1.8), Bacillus anthracis, Expect = 2e-15,Identities = 96/297 (32%), Positives = 163/297 (54%), Gaps = 35/297 (11%),(P60747) Foldase protein prsA precursor (EC 5.2.1.8),InterPro: PpiC-type peptidyl-prolyl cis-trans isomerase; Hypothetical protein YP_002634506.1 catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates YP_002634507.1 (Q9JMH9) Myosin XVIIIA (Myosin 18A) (Myosin containing PDZ domain); Hypothetical protein YP_002634508.1 (O26641) DNA double-strand break repair protein mre11,InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002634509.1 (Q8CP17) Chaperone protein dnaK (Heat shock protein 70) (Heat shock 70 kDa protein) (HSP70); Hypothetical protein YP_002634510.1 (P54794) Monoamine regulon transcriptional regulator,InterPro: Protein of unknown function DUF445; Hypothetical protein YP_002634511.1 (O27383) Putative HTH-type transcriptional regulator MTH1328,InterPro: Forkhead-associated (FHA); Hypothetical protein YP_002634512.1 (P58734) C4-dicarboxylate transport protein,InterPro: Sodium:dicarboxylate symporter; Hypothetical protein YP_002634513.1 similar to two-component response regulator [Bacillus halodurans C-125],Expect = 8e-48,Identities = 91/210 (43%), Positives = 151/210 (71%), Gaps = 7/210 (3%),(P55184) Hypothetical sensory transduction protein yxjL,InterPro: Response regulator receiver; Hypothetical protein YP_002634514.1 similar to Bacillus halodurans two-component sensor histidine kinase BH2214 TR:Q9KAS3, Expect = 9e-37,Identities = 90/260 (34%), Positives = 139/260 (53%), Gaps = 10/260 (3%),(P54663) Sensor protein degS (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634515.1 similar to RNA pseudouridylate synthase (Staphylococcus aureus),(P54604) Hypothetical pseudouridine synthase yhcT (EC 4.2.1.70) (Pseudouridylate synthase) (Uracil hydrolyase),InterPro: Pseudouridine synthase RluD; Hypothetical protein YP_002634516.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_002634517.1 Hypothetical protein YP_002634518.1 (O35000) Glucosamine-6-phosphate deaminase 1 (EC 3.5.99.6) (Glucosamine-6-phosphate isomerase 1) (GNPDA 1) (GlcN6P deaminase 1),InterPro: Glucosamine/galactosamine-6-phosphate isomerase; Hypothetical protein YP_002634519.1 (P32813) Hypothetical 18.2 kDa protein in gldA 3region (ORF3),InterPro: RNA methyltransferase TrmH group 2; Hypothetical protein YP_002634520.1 (P32815) Hypothetical protein in gldA 3region (ORF5) (Fragment),InterPro: 4Fe-4S cluster binding; Hypothetical protein YP_002634521.1 similar to glutamine transport ATP-binding protein glnQ,,Bacillus stearothermophilus, Expect = 3e-81,Identities = 140/241 (58%), Positives = 177/241 (73%),(P27675) Glutamine transport ATP-binding protein glnQ,InterPro: ABC transporter; Hypothetical protein YP_002634522.1 similar to glutamine-binding periplasmic protein Streptococcus pyogenes,(P54536) Probable amino-acid ABC transporter permease protein yqiY,InterPro: Bacterial extracellular solute-binding protein family 3; Hypothetical protein YP_002634523.1 similar to Treponema pallidum regulatory protein and to Streptococcus pyogenes probable regulatory protein ,InterPro: Phosphotransferase system EIIC; Hypothetical protein YP_002634524.1 similar to Peroxide operon regulator perR, Bacillus subtilis, Expect = 2e-54, Identities = 96/142 (67%),Positives = 121/142 (85%),(P71086) Peroxide operon regulator,InterPro: Ferric-uptake regulator; Hypothetical protein YP_002634525.1 (Q58424) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein YP_002634526.1 similar to bacterioferritin comigratory protein bcp, Escherichia coli, Expect = 4e-26, Identities = 59/143 (41%), Positives = 83/143 (58%),(P44411) Bacterioferritin comigratory protein homolog,InterPro: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Hypothetical protein YP_002634527.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate YP_002634528.1 (Q58791) Hypothetical protein MJ1396; Hypothetical protein YP_002634529.1 (P45861) Hypothetical ABC transporter ATP-binding protein ywjA,InterPro: ABC transporter transmembrane region; Hypothetical protein YP_002634530.1 InterPro: Protein of unknown function DUF402; Hypothetical protein YP_002634531.1 similar to A/G-specific adenine glycosylase mutY (EC 3.2.2.-),Escherichia coli,Expect = 2e-49, Identities = 123/354 (34%), Positives = 182/354 (51%), Gaps = 20/354 (5%),(P17802) A/G-specific adenine glycosylase (EC 3.2.2.-),InterPro: A/G-specific adenine glycosylase MutY; Hypothetical protein YP_002634532.1 InterPro: Predicted membrane-bound metal-dependent hydrolase; Hypothetical protein YP_002634533.1 (Q8K2X1) Potential phospholipid-transporting ATPase VD (EC 3.6.3.1) (ATPVD); Hypothetical protein YP_002634534.1 low similarity to teichoic acid export ATP-binding protein tagH (Bacillus subtilis, Expect = 8e-10,Identities = 82/439 (18%), Positives = 177/439 (40%), Gaps = 30/439 (6%)),(P42954) Teichoic acid export ATP-binding protein tagH (EC 3.6.3.40) (Teichoic acid-transporting ATPase),InterPro: ABC transporter; Hypothetical protein YP_002634535.1 (Q9UII4) Cyclin-E binding protein; Hypothetical protein YP_002634536.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities YP_002634537.1 monofunctional; catalyzes the elongation of glycan strands in cell wall biosynthesis YP_002634538.1 (Q53719) Hypothetical protein SAV1875/SA1692/MW1815 (ORF1),InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein YP_002634539.1 Hypothetical protein YP_002634540.1 (P56414) Molybdenum cofactor biosynthesis protein A,InterPro: Radical SAM; Hypothetical protein YP_002634541.1 (Q9PJK7) Putative acyl-CoA thioester hydrolase TC0822 (EC 3.1.2.-),InterPro: Thioesterase superfamily; Hypothetical protein YP_002634542.1 similar to Aminopeptidase ampS (EC 3.4.11.-),Bacillus subtilis, Expect = 0.0, Identities = 205/412 (49%), Positives = 278/412 (67%), Gaps = 2/412 (0%),(P39762) Aminopeptidase ampS (EC 3.4.11.-),InterPro: Peptidase M29 thermophilic metalloprotease; Hypothetical protein YP_002634543.1 Hypothetical protein YP_002634544.1 similar to eucaryotic low molecular weight phosphotyrosine protein phosphatase (EC 3.1.3.48)(P81693),(Low molecular weight cytosolic acid phosphatase) (EC 3.1.3.2) (PTPase),InterPro: Low molecular weight phosphotyrosine protein phosphatase; Hypothetical protein YP_002634545.1 (P09922) Interferon-induced GTP-binding protein Mx1 (Influenza resistance protein); Hypothetical protein YP_002634546.1 (Q8DDS2) tRNA processing ribonuclease BN (EC 3.1.-.-) (RNase BN),InterPro: Ribonuclease BN; Hypothetical protein YP_002634547.1 similar to carbonic anhydrase, prokaryotic type,(Q10612) Hypothetical protein Rv1284/MT1322/Mb1315,InterPro: Carbonic anhydrase prokaryotic; Hypothetical protein YP_002634548.1 putative vancomycin resistance associated two-component regulator ,(Q51373) Response regulator gacA (Global activator),InterPro: Response regulator receiver; Hypothetical protein YP_002634549.1 similar to vancomycin resistance associated two-component sensor histidine kinase (Staphylococcus aureus),(P27668) Sensor protein uhpB (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634550.1 (P04540) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3); Hypothetical protein YP_002634551.1 (Q9RT21) Trigger factor (TF); Hypothetical protein YP_002634552.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_002634553.1 only local similarity to: (P54538) Hypothetical protein yqjA; Hypothetical protein YP_002634554.1 (Q8Y7R3) Cobyric acid synthase; Hypothetical protein YP_002634555.1 similar to Mur ligase family protein,(Q9JSZ5) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) (D-glutamic acid adding enzyme); Hypothetical protein YP_002634556.1 similar to putative DNA polymerase III, alpha chain PolC type (staphylococcus aureus),(Q8RA32) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII),InterPro: Exonuclease; Hypothetical protein YP_002634557.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_002634558.1 similar to Glucose starvation-inducible protein B gsiB, Bacillus subtilis, Expect = 2e-13, Identities = 60/99 (60%), Positives = 79/99 (79%),(P26907) Glucose starvation-inducible protein B (General stress protein B); Hypothetical protein YP_002634559.1 similar to 23S rRNA (Uracil-5-)-methyltransferase rumA (EC 2.1.1.-),,23S rRNA(M-5-U1939)-methyltransferase,from Escherichia coli,,Expect = 1e-45,Identities = 136/448 (30%), Positives = 219/448 (48%),Gaps = 50/448 (11%),(Q9CJX3) 23S rRNA (Uracil-5-)-methyltransferase rumA (EC 2.1.1.-) (23S rRNA(M-5-U1939)-methyltransferase),InterPro: tRNA (uracil-5-)-methyltransferase/TrmA; Hypothetical protein YP_002634560.1 similar to YegS from E. coli YP_002634561.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002634562.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002634563.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_002634564.1 Hypothetical protein YP_002634565.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate YP_002634566.1 (P39850) Capsular polysaccharide biosynthesis protein capA; Hypothetical protein YP_002634567.1 DNA ligase ligA, (EC 6.5.1.2), Escherichia coli,,Expect = 1e-158, Identities = 302/668 (45%), Positives = 415/668 (62%), Gaps = 9/668 (1%),(O87703) DNA ligase (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD+]),InterPro: NAD-dependent DNA ligase; Hypothetical protein YP_002634568.1 ATP-dependent DNA helicase pcrA (EC 3.6.1.-),,Bacillus stearothermophilus,(Q99SY2) ATP-dependent DNA helicase pcrA (EC 3.6.1.-),InterPro: ATP-dependent DNA helicase PcrA; Hypothetical protein YP_002634569.1 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer YP_002634570.1 Hypothetical protein YP_002634571.1 similar to putative DNA-binding protein Staphylococcus aureus; Hypothetical protein YP_002634572.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_002634573.1 Hypothetical protein YP_002634574.1 (P61544) Hypothetical UPF0316 protein SA1727; Hypothetical protein YP_002634575.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_002634576.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_002634577.1 Nitric oxide synthase oxygenase (EC 1.-.-.), NOSoxy-like protein,SANOS, Staphylococcus aureus,,Expect = 1e-141,Identities = 242/358 (67%), Positives = 288/358 (80%),Gaps = 2/358 (0%),(O54705) Nitric oxide synthase inducible (EC 1.14.13.39) (NOS type II) (Inducible NOS) (iNOS),InterPro: Nitric oxide synthase NOS; Hypothetical protein YP_002634578.1 similar to putative prephenate dehydratase Staphylococcus aureus,Expect = 3e-86, Identities = 158/266 (59%), Positives = 202/266 (75%), Gaps = 2/266 (0%),(Q58054) Probable prephenate dehydratase (EC 4.2.1.51) (PDT),InterPro: Prephenate dehydratase with ACT region; Hypothetical protein YP_002634579.1 similar to daunorubicin resistance protein (drrC),L.monocytogenes_F2365 ,Expect = 0.0, Identities = 378/747 (50%), Positives = 517/747 (69%), Gaps = 8/747 (1%),similar to excinuclease ABC (subunit A),L.monocytogenes, ,Expect = 0.0,Identities = 377/747 (50%), Positives = 518/747 (69%), Gaps = 8/747 (1%),(Q56242) UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A),InterPro: ABC transporter; Hypothetical protein YP_002634580.1 similar to probable aldehyde dehydrogenase,Bacillus subtilis,,Expect = 1e-129, Identities = 223/447 (49%), Positives = 308/447 (68%), Gaps = 2/447 (0%),(P39616) Probable aldehyde dehydrogenase ywdH (EC 1.2.1.3),InterPro: Aldehyde dehydrogenase; Hypothetical protein YP_002634581.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_002634582.1 (P37532) Hypothetical protein yaaI,InterPro: Isochorismatase hydrolase family; Hypothetical protein YP_002634583.1 (Q10325) Mst2 protein,InterPro: Parallel beta-helix repeat; Hypothetical protein YP_002634584.1 Similar to C-terminus of putative sodium:sulfate symporter [Staphylococcus aureus subsp. aureus MRSA252] (YP_041382); Hypothetical protein YP_002634585.1 (Q9ES88) Solute carrier family 13 member 2 (Renal sodium/dicarboxylate cotransporter) (Na(+)/dicarboxylate cotransporter 1) (NaDC-1),InterPro: Sodium/sulphate symporter,Similar to N-terminus of putative sodium:sulfate symporter [Staphylococcus aureus subsp. aureus MRSA252] (YP_041382); Hypothetical protein YP_002634586.1 (O86281) Hypothetical protein ywcC (ORFB); Hypothetical protein YP_002634587.1 (P54561) Hypothetical protein yqjX; Hypothetical protein YP_002634588.1 (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 intergenic region; Hypothetical protein YP_002634589.1 (Q44258) 1-carboxy-3-chloro-34-dihydroxycyclo hexa-15-diene dehydrogenase (EC 1.-.-.-); Hypothetical protein YP_002634590.1 (Q8K9Q5) Exoribonuclease II (EC 3.1.13.1) (Ribonuclease II) (RNase II); Hypothetical protein YP_002634591.1 Hypothetical protein YP_002634592.1 (P49468) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit); Hypothetical protein YP_002634593.1 (Q96419) Thioredoxin H-type (TRX-H),InterPro: Thioredoxin domain 2; Hypothetical protein YP_002634594.1 Hypothetical protein YP_002634595.1 (P72335) Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I),InterPro: ABC transporter; Hypothetical protein YP_002634596.1 Hypothetical protein YP_002634597.1 (P46903) ATP-binding transport protein natA (Na(+) ABC transporter),InterPro: ABC transporter; Hypothetical protein YP_002634598.1 (P54590) Hypothetical transcriptional regulator yhcF,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein YP_002634599.1 similar to aspartate transaminase protein (staphylococcus epidermidis),(P00505) Aspartate aminotransferase mitochondrial precursor (EC 2.6.1.1) (Transaminase A) (Glutamate oxaloacetate transaminase-2); Hypothetical protein YP_002634600.1 Hypothetical protein YP_002634601.1 similar to IgG-binding protein sbi (staphylococcus aureus),Expect = 3e-34, Identities = 125/456 (27%),Positives = 223/456 (48%), Gaps = 26/456 (5%),(Q99XA2) Immunoglobulin G binding protein A precursor (IgG binding protein A) (Staphylococcal protein A),InterPro: Ig-binding B; Hypothetical protein YP_002634602.1 Hypothetical protein YP_002634603.1 local similarity to:,(P31728) Probable D-methionine-binding lipoprotein metQ precursor (28 kDa outer membrane protein),InterPro: NLPA lipoprotein; Hypothetical protein YP_002634604.1 similar to low-specificity L-threonine aldolase ltaE (EC 4.1.2.5),,Pseudomonas sp. (strain NCIMB 10558),Expect = 1e-143, Identities = 99/346 (28%),Positives = 155/346 (44%), Gaps = 21/346 (6%), (O50584) Low-specificity L-threonine aldolase (EC 4.1.2.5) (Low-specificity L-TA); Hypothetical protein YP_002634605.1 Hypothetical protein YP_002634606.1 Hypothetical protein YP_002634607.1 Hypothetical protein YP_002634608.1 Hypothetical protein YP_002634609.1 Hypothetical protein YP_002634610.1 (Q9PRB3) Hypothetical protein UU032; Hypothetical protein YP_002634611.1 Hypothetical protein YP_002634612.1 (Q10367) Hypothetical protein C22E12.17c in chromosome I,InterPro: Bacterial regulatory protein LuxR family; Hypothetical protein YP_002634613.1 Hypothetical protein YP_002634614.1 (O73683) Alzheimers disease amyloid A4 protein homolog precursor [Contains: Beta-amyloid protein (Beta-APP) (A-beta)]; Hypothetical protein YP_002634615.1 (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin methylesterase) (PE),InterPro: Phage terminase small subunit putative P27 family; Hypothetical protein YP_002634616.1 Hypothetical protein YP_002634617.1 Hypothetical protein YP_002634618.1 Hypothetical protein YP_002634619.1 Hypothetical protein YP_002634620.1 (P10277) Putative P4-specific DNA primase (EC 2.7.7.-),InterPro: Poxvirus D5 protein; Hypothetical protein YP_002634621.1 Hypothetical protein YP_002634622.1 Hypothetical protein YP_002634623.1 Hypothetical protein YP_002634624.1 (P71561) ATP-dependent DNA helicase pcrA (EC 3.6.1.-); Hypothetical protein YP_002634625.1 (P44189) Hypothetical protein HI1418,InterPro: BRO family N-terminal; Hypothetical protein YP_002634626.1 Hypothetical protein YP_002634627.1 (Q9RPQ3) Histidine biosynthesis bifunctional protein hisIE [Includes: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)]; Hypothetical protein YP_002634628.1 Hypothetical protein YP_002634629.1 (Q9CI63) Prophage ps2 probable integrase (Int-TnX),InterPro: Phage integrase; Hypothetical protein YP_002634630.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002634631.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_002634632.1 (Q9CDG9) Hypothetical UPF0177 protein yxdF,InterPro: Abortive infection protein; Hypothetical protein YP_002634633.1 (Q8T5T1) Midasin (MIDAS-containing protein); Hypothetical protein YP_002634634.1 (P55177) Hypothetical UPF0012 protein in agr operon (ORF 5),InterPro: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Hypothetical protein YP_002634636.1 Hypothetical protein YP_002634637.1 (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit (Voltage-gated calcium channel alpha subunit Cav2.3) (Calcium channel L type alpha-1 polypeptide isoform 6) (Brain calcium channel II) (BII),Length of gene product similar to AgrC of S. simulans and S. carnosus. AgrC of S. aureus and S. lugdunensis are longer. Adjacent ORF codes for a putative protein similar to the C-terminal part of the larger homologues: probably truncated; Hypothetical protein YP_002634638.1 similar to C-terminal part of receptor histidine kinase [Staphylococcus aureus]- AgrC (AAG03057),O34427) Sensor protein citS (EC 2.7.3.-),InterPro: ATP-binding region ATPase-like; Hypothetical protein YP_002634639.1 Hypothetical protein YP_002634640.1 similar to Sucrose-6-phosphate hydrolase scrB (EC 3.2.1.26),,Staphylococcus xylosus, Expect = 1e-134,Identities = 242/490 (49%), Positives = 327/490 (66%),Gaps = 9/490 (1%),(Q05936) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase) (Invertase),InterPro: Sucrose-6-phosphate hydrolase; Hypothetical protein YP_002634641.1 (P33015) Hypothetical protein yeeE,InterPro: YeeE/YedE; Hypothetical protein YP_002634642.1 (P33014) Hypothetical UPF0033 protein yeeD,InterPro: Protein of unknown function UPF0033; Hypothetical protein YP_002634643.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002634644.1 (O05519) Hypothetical ABC transporter ATP-binding protein ydiF,InterPro: ABC transporter; Hypothetical protein YP_002634645.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002634646.1 putative acetyltransferase,(P41227) N-terminal acetyltransferase complex ARD1 subunit homolog (EC 2.3.1.-),InterPro: Ribosomal-protein-alanine acetyltransferase; Hypothetical protein YP_002634647.1 (P76256) Hypothetical protease yeaZ (EC 3.4.-.-),InterPro: Peptidase M22 glycoprotease metalloprotease; Hypothetical protein YP_002634648.1 (O05515) Hypothetical UPF0079 protein ydiB,InterPro: Protein of unknown function UPF0079; Hypothetical protein YP_002634649.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002634650.1 similar to Acetolactate synthase large subunit ilvB (EC 2.2.1.6),,Bacillus subtilis, Expect = 0.0, Identities = 314/572 (54%), Positives = 415/572 (72%), Gaps = 2/572 (0%),(P37251) Acetolactate synthase large subunit (EC 2.2.1.6) (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS) (Vegetative protein 105) (VEG105),InterPro: Acetolactate synthase large subunit biosynthetic type; Hypothetical protein YP_002634651.1 similar to Acetolactate synthase small subunit ilvH (EC 2.2.1.6),Synechocystis sp. (strain PCC 6803), Expect = 1e-49,Identities = 55/159 (34%), Positives = 86/159 (54%),Gaps = 6/159 (3%),(Q55141) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS),InterPro: Acetolactate synthase small subunit; Hypothetical protein YP_002634652.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002634653.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_002634654.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_002634655.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_002634656.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_002634657.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic YP_002634658.1 (Q99SJ0) Protein sprT-like,InterPro: Putative metallopeptidase (SprT family),SprT; Hypothetical protein YP_002634659.1 similar to several transcriptional regulatory proteins,(P57072) Hypothetical protein NMA0194,InterPro: Ribonuclease RNase H fold containing; Conserved hypothetical protein YP_002634660.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase YP_002634661.1 binds to sigma-B preventing the formation of an RNA polymerase holoenzyme YP_002634662.1 similar to Anti-sigma-B factor antagonist rsbV,,Bacillus subtilis, Expect = 4e-18, Identities = 43/106 (40%), Positives = 73/106 (68%), Gaps = 1/106 (0%),(P60071) Anti-sigma-B factor antagonist (Anti-anti-sigma-B factor),InterPro: Anti-sigma factor antagonist; Hypothetical protein YP_002634663.1 similar to Sigma factor sigB regulation protein rsbU (EC 3.1.3.3),Bacillus subtilis, Expect = 1e-147,Identities = 126/332 (37%), Positives = 207/332 (62%),Gaps = 5/332 (1%),(P40399) Phosphoserine phosphatase rsbU (EC 3.1.3.3) (Sigma factor sigB regulation protein rsbU),InterPro: Protein phosphatase 2C-like; Hypothetical protein YP_002634664.1 (P13976) Protein pemK,InterPro: PemK-like protein; Hypothetical protein YP_002634665.1 Hypothetical protein YP_002634666.1 similar to Alanine racemase (alr), Staphylococcus aureus,,Expect = 1e-149, Identities = 216/384 (56%),Positives = 276/384 (71%), Gaps = 2/384 (0%),(Q9ZAH5) Alanine racemase 1 (EC 5.1.1.1),InterPro: Alanine racemase; Hypothetical protein YP_002634667.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_002634668.1 (P53154) Glycerol uptake protein,InterPro: Bacterial membrane flanked domain; Hypothetical protein YP_002634669.1 InterPro: Bacterial membrane flanked domain; Hypothetical protein YP_002634670.1 InterPro: Bacterial membrane flanked domain; Hypothetical protein YP_002634671.1 similar to cold-shock DEAD-box protein A, Synonym ATP-dependent RNA helicase deaD, Escherichia coli, Expect = 1e-88,Identities = 183/428 (42%), Positives = 270/428 (63%), Gaps = 7/428 (1%),(P35599) Probable RNA helicase exp9 (Exported protein 9),InterPro: DEAD/DEAH box helicase; Hypothetical protein YP_002634672.1 similar to UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase murF, (EC 6.3.2.10), Escherichia coli, Expect = 4e-48, Identities = 148/459 (32%),Positives = 237/459 (51%), Gaps = 16/459 (3%),(P96613) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme),InterPro: UDP-N-acetylmuramoylalanyl-D-glutamyl-26-diaminopimelate-D -alanyl-D-alanyl ligase; Hypothetical protein YP_002634673.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_002634674.1 similar to Rod shape-determining protein rodA (mrdB),Escherichia coli,N terminal incomplete alignment,Expect = 1e-32,Identities = 102/331 (30%), Positives = 178/331 (53%), Gaps = 27/331 (8%) ,(P39604) Hypothetical protein ywcF,InterPro: Cell cycle protein; Hypothetical protein YP_002634675.1 N terminal incomplete alignment (74AA not aligned). Rest similar to Copper-transporting P-type ATPase copA (EC 3.6.3.-)Bacillus subtilis,Expect = 0.0, Identities = 384/739 (51%), Positives = 507/739 (68%), Gaps = 24/739 (3%),(O32220) Copper-transporting P-type ATPase copA (EC 3.6.3.-) (CopA protein),InterPro: Copper-translocating P-type ATPase; Hypothetical protein YP_002634676.1 similar to Copper chaperone copZ,Synonyms CopZ protein,Copper-ion-binding protein copZ, Bacillus subtilis,,Expect = 5e-09, Identities = 34/69 (49%),Positives = 46/69 (66%),(O32221) Copper chaperone copZ (CopZ protein) (Copper-ion-binding protein),InterPro: Heavy metal binding; Hypothetical protein YP_002634677.1 C terminal similar to copper ion binding protein,(O32620) COP associated protein (Copper ion binding protein),InterPro: Heavy metal binding; Hypothetical protein YP_002634678.1 (P76424) Hypothetical protein yohL,InterPro: Protein of unknown function DUF156; Hypothetical protein YP_002634679.1 Cardiolipin synthetase,Synonyms EC 2.7.8.-,Similar to cardiolipin synthase cls, Bacillus pseudofirmus,,Expect = 1e-98, Identities = 205/480 (42%), Positives = 288/480 (60%), Gaps = 14/480 (2%),(Q8CNK3) Cardiolipin synthetase 2 (EC 2.7.8.-) (Cardiolipin synthase 2) (CL synthase 2),InterPro: Phospholipase D/Transphosphatidylase; Hypothetical protein YP_002634680.1 (P54168) Hypothetical protein ypgQ,InterPro: Metal-dependent phosphohydrolase HD region; Hypothetical protein YP_002634681.1 similar to B. subtilis regulatory protein PaiA,Expect = 1e-67, Identities = 82/169 (48%), Positives = 126/169 (74%),(P21340) Protease synthase and sporulation negative regulatory protein PAI,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002634682.1 similar to putative lipoprotein precursor ,(Q8CMK8) Membrane protein oxaA 2 precursor,InterPro: 60 kDa inner membrane protein; Hypothetical protein YP_002634683.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_002634684.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP YP_002634685.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine YP_002634686.1 similar to transcriptional activator tenA ,Bacillus subtilis, Expect = 1e-10,Identities = 55/224 (24%),Positives = 100/224 (44%), Gaps = 9/224 (4%),InterPro: TENA/THI-4 protein; Hypothetical protein YP_002634687.1 similar to C-terminal part of sceD protein [Staphylococcus epidermidis RP62A] (YP_189267); Hypothetical protein YP_002634688.1 Hypothetical protein YP_002634689.1 (Q99R69) Immunodominant staphylococcal antigen A precursor; Hypothetical protein YP_002634690.1 (Q8CMZ9) Immunodominant staphylococcal antigen A precursor; Hypothetical protein YP_002634691.1 (P59927) Single-strand binding protein (SSB) (Helix-destabilizing protein),InterPro: Single-strand binding protein; Hypothetical protein YP_002634692.1 Hypothetical protein YP_002634693.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_002634694.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002634695.1 Hypothetical protein YP_002634696.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_002634697.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002634698.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_002634699.1 (Q99SF3) ATP synthase alpha chain (EC 3.6.3.14),InterPro: ATP synthase F1 alpha subunit,Similar to C-terminal part of ATP synthase alpha chain [Staphylococcus aureus subsp. aureus MSSA476](CAG43816); Hypothetical protein YP_002634700.1 (P48080) ATP synthase alpha chain (EC 3.6.3.14),Similar to N-terminus of ATP synthase alpha chain [Staphylococcus aureus subsp. aureus MSSA476] (CAG43816); Hypothetical protein YP_002634701.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_002634702.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel YP_002634703.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_002634704.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_002634705.1 similar to UDP-N-acetylglucosamine 2-epimerase (mnaA) (bacillus subtilis) Expect = 1e-136 Identities = 238/373 (63%), Positives = 302/373 (80%),(Q9L6R5) UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) (UDP-GlcNAc-2-epimerase),InterPro: UDP-N-acetylglucosamine 2-epimerase; Hypothetical protein YP_002634706.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_002634707.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002634708.1 (P39157) Hypothetical protein ywlG,InterPro: Conserved hypothetical protein 1440; Hypothetical protein YP_002634709.1 (P39155) Putative low molecular weight protein-tyrosine-phosphatase ywlE (EC 3.1.3.48),InterPro: Low molecular weight phosphotyrosine protein phosphatase; Hypothetical protein YP_002634710.1 (P39153) Hypothetical protein ywlC,InterPro: Sua5/YciO/YrdC/YwlC; Hypothetical protein YP_002634711.1 similar to protoporphyrinogen oxidase (hemK) ,(P45873) HemK protein homolog (EC 2.1.1.-),InterPro: Modification methylase HemK family; Hypothetical protein YP_002634712.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_002634713.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_002634714.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_002634715.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002634716.1 (Q25417) Aldehyde dehydrogenase mitochondrial precursor (EC 1.2.1.3) (ALDH class 2) (P51),InterPro: Aldehyde dehydrogenase; Hypothetical protein YP_002634717.1 (P96673) Hypothetical UPF0087 protein ydeP,InterPro: Protein of unknown function DUF24; Hypothetical protein YP_002634718.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002634719.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis YP_002634720.1 (P06629) Hypothetical protein ywjG; Hypothetical protein YP_002634721.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002634722.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling YP_002634723.1 similar to spermine/spermidine acetyltransferase blt,(P39909) Spermine/spermidine acetyltransferase (EC 2.3.1.57),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002634724.1 (P16681) PhnB protein; Hypothetical protein YP_002634725.1 catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type II pantothenate kinases are not regulated by feedback inhibition by coenzyme A YP_002634726.1 (P94528) Probable arabinose-binding protein precursor; Hypothetical protein YP_002634727.1 (P76052) Aminobenzoyl-glutamate utilization protein B,InterPro: Peptidase M20/M25/M40,Note: aa 1 to 386 similar to amidase [Staphylococcus epidermidis ATCC 12228] (AAO05330) (aa 1 to 386). aa 405 to 792 similar to conserved hypothetical protein [Staphylococcus epidermidis ATCC ,12228] (AAO05329) (aa 8 to 393).; Hypothetical protein YP_002634728.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 YP_002634729.1 (Q8CPA8) Protein femB,InterPro: Methicillin resistance protein,Similar to C-terminus of fmhA protein / lysostaphin immunity factor [Staphylococcus haemolyticus JCSC1435] (BAE03951) (aa 17 to 413); Hypothetical protein YP_002634730.1 similar to N-terminus of fmhA protein / lysostaphin immunity factor [Staphylococcus haemolyticus JCSC1435] (BAE03951) (aa 1 to 16).; Hypothetical protein YP_002634731.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_002634732.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate YP_002634733.1 Hypothetical protein YP_002634734.1 no complete alignment, local similarity to:,(Q47746) D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase),InterPro: DD-carboxypeptidase VanY; Hypothetical protein YP_002634735.1 (P73321) Hypothetical protein slr1894,InterPro: Ferritin and Dps; Hypothetical protein YP_002634736.1 (P40761) Hypothetical protein yuxK (ORF2); Hypothetical protein YP_002634737.1 (P36112) Hypothetical 61.1 kDa protein in YPT52-DBP7 intergenic region; Hypothetical protein YP_002634738.1 Hypothetical protein YP_002634739.1 (P39841) Mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) (Phosphohexomutase),InterPro: Mannose-6-phosphate isomerase type I; Hypothetical protein YP_002634740.1 similar to transcriptional regulator, GntR family,(P44487) Uxu operon regulator,InterPro: Bacterial regulatory protein GntR family; Hypothetical protein YP_002634741.1 (Q04304) Hypothetical 24.9 kDa protein in RCA1-NPL6 intergenic region; Hypothetical protein YP_002634742.1 (P45949) Arsenical resistance operon repressor,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein YP_002634743.1 (Q8ZGY6) Zinc transporter zitB,InterPro: Cation efflux protein; Hypothetical protein YP_002634744.1 no complete alignments, truncated ORF?,local similarity to,(Q87ST8) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002634745.1 (Q92BW9) DNA translocase ftsK; Hypothetical protein YP_002634746.1 (Q8X8L6) Hypothetical protein yigL,InterPro: Cof protein; Hypothetical protein YP_002634747.1 (P76102) Hypothetical protein ydcM,InterPro: Transposase (probable) IS891/IS1136/IS1341 family; Hypothetical protein YP_002634748.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_002634749.1 (P28008) PTS system mannitol-specific IIBC component (EIIBC-Mtl) (Mannitol-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Mtl),InterPro: PTS system mannitol-specific enzyme IIC; Hypothetical protein YP_002634750.1 similar to transcription antiterminator BglG family ,(P46321) Probable licABCH operon regulator,InterPro: Transcriptional antiterminator bglG; Hypothetical protein YP_002634751.1 (P17875) PTS system mannitol-specific IIA component (EIIA-Mtl) (Mannitol-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Mtl),InterPro: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Hypothetical protein YP_002634752.1 (Q99SA1) Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17),InterPro: Mannitol dehydrogenase; Hypothetical protein YP_002634753.1 similar to MgtC/SapB family,(P26606) Hypothetical protein yhiD,InterPro: MgtC/SapB transporter; Hypothetical protein YP_002634754.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_002634755.1 Hypothetical protein YP_002634756.1 (P75528) Hypothetical protein MG105 homolog (K04_orf202),InterPro: Protein of unknown function DUF147; Hypothetical protein YP_002634757.1 similar to ATP-binding Mrp-like protein ,(P50863) Mrp protein homolog,InterPro: Mrp family; Hypothetical protein YP_002634758.1 similar to multidrug resistance protein,(P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Hypothetical protein YP_002634759.1 (Q9PPI9) DNA polymerase III alpha subunit (EC 2.7.7.7); Hypothetical protein YP_002634760.1 similar to multidrug transporter,(P44927) Multidrug resistance protein B homolog,InterPro: General substrate transporter; Hypothetical protein YP_002634761.1 (P54176) Hemolysin III (HLY-III),InterPro: Hly-III related proteins; Hypothetical protein YP_002634762.1 similar to UTP--glucose-1-phosphate uridylyltransferase,(Q16222) UDP-N-acetylhexosamine pyrophosphorylase (Antigen X) (AGX) (Sperm-associated antigen 2) [Includes: UDP-N-acetylgalactosamine pyrophosphorylase (EC 2.7.7.-) (AGX-1); UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (AGX-2)],InterPro: UTP--glucose-1-phosphate uridylyltransferase; Hypothetical protein YP_002634763.1 (O32205) Hypothetical protein yvsG precursor,InterPro: Predicted membrane-bound metal-dependent hydrolase; Hypothetical protein YP_002634764.1 (Q9PQK6) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS); Hypothetical protein YP_002634765.1 Hypothetical protein YP_002634766.1 weak similarity to low temperature requirement A protein(O33683) Hypothetical protein RA0937; Hypothetical protein YP_002634767.1 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source YP_002634768.1 (P30267) Hypothetical 50.9 kDa protein in katA 3region (ORF A); Hypothetical protein YP_002634769.1 (P15029) Iron(III) dicitrate transport system permease protein fecD,InterPro: FecCD transport family; Hypothetical protein YP_002634770.1 (P49936) Ferrichrome transport system permease protein fhuB,InterPro: FecCD transport family; Hypothetical protein YP_002634771.1 similar to Iron(III) dicitrate-binding periplasmic protein [Precursor],(E. coli),(P15028) Iron(III) dicitrate-binding periplasmic protein precursor,InterPro: Periplasmic binding protein; Hypothetical protein YP_002634772.1 (Q8R860) Alanine racemase 2 (EC 5.1.1.1),InterPro: Protein of unknown function UPF0001; Hypothetical protein YP_002634773.1 (Q9Z3R0) Rhizobactin siderophore biosynthesis protein rhbC,InterPro: IucA/IucC; Hypothetical protein YP_002634774.1 similar to transporter,(P21191) Quinolone resistance protein norA; Hypothetical protein YP_002634775.1 (P55706) Hypothetical 71.0 kDa protein y4XN,InterPro: IucA/IucC; Hypothetical protein YP_002634776.1 (Q53485) Alkaline shock protein,InterPro: Protein of unknown function DUF322; Hypothetical protein YP_002634777.1 Hypothetical protein YP_002634778.1 Hypothetical protein YP_002634779.1 (P54417) Glycine betaine transporter opuD,InterPro: BCCT transporter; Hypothetical protein YP_002634780.1 Putative NADP-dependent oxidoreductase,(Q8CRJ7) Zinc-type alcohol dehydrogenase-like protein SE1777,InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein YP_002634781.1 (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein YP_002634782.1 (P15801) DNA polymerase gamma (EC 2.7.7.7) (Mitochondrial DNA polymerase catalytic subunit); Hypothetical protein YP_002634783.1 (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Conserved hypothetical protein YP_002634784.1 (Q8CR12) Hypothetical UPF0085 protein SE2159,InterPro: Protein of unknown function DUF299; Hypothetical protein YP_002634785.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002634786.1 (P09278) Large tegument protein; Hypothetical protein YP_002634787.1 (P37187) PTS system galactitol-specific IIA component (EIIA-Gat) (Galacticol-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69),InterPro: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Hypothetical protein YP_002634788.1 (Q92F90) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS),InterPro: PAS domain; Hypothetical protein YP_002634789.1 similar to,(P39701) Alpha-ribazole phosphatase (EC 3.1.3.73) (Alpha-ribazole-5-phosphate phosphatase),InterPro: Phosphoglycerate/bisphosphoglycerate mutase; Hypothetical protein YP_002634790.1 (P32400) N-carbamoylsarcosine amidase (EC 3.5.1.59) (N-carbamoylsarcosine amidohydrolase) (CSHASE),InterPro: Isochorismatase hydrolase family; Conserved hypothetical protein YP_002634791.1 similar to multidrug resistance integral membrane efflux protein EmrB,(P54585) Hypothetical transport protein yhcA,InterPro: Drug resistance transporter EmrB/QacA subfamily; Hypothetical protein YP_002634792.1 (P54182) Putative HTH-type transcriptional regulator ypoP,InterPro: Bacterial regulatory protein MarR family; Conserved hypothetical protein YP_002634793.1 forms a direct contact with the tRNA during translation YP_002634794.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002634795.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002634796.1 (Q58966) Hypothetical protein MJ1571,InterPro: Cobalt transport protein; Hypothetical protein YP_002634797.1 with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene YP_002634798.1 with CbiNQ forms the ABC transporter for cobalt import; Staphylococcus has two adjacent copies of this gene YP_002634799.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002634800.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002634801.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002634802.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002634803.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002634804.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_002634805.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_002634806.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_002634807.1 late assembly protein YP_002634808.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002634809.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_002634810.1 (P09415) 50S ribosomal protein L18,InterPro: Ribosomal protein L18P/L5E; Conserved hypothetical protein YP_002634811.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002634812.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002634813.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_002634814.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002634815.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002634816.1 (P06381) Chloroplast 50S ribosomal protein L14,InterPro: Ribosomal protein L14b/L23e,Ribosomal protein L14 bacterial and organelle form; Conserved hypothetical protein YP_002634817.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002634818.1 one of the stabilizing components for the large ribosomal subunit YP_002634819.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002634820.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_002634821.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002634822.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002634823.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002634824.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002634825.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002634826.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002634827.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002634828.1 (Q07429) Ammonium transporter nrgA (Membrane protein nrgA) (Protein amtB); Hypothetical protein YP_002634829.1 similar to acetyltransferase, GNAT family,(P16691) PhnO protein,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002634830.1 (P31440) Hypothetical protein yicO,InterPro: Xanthine/uracil/vitamin C permease family; Hypothetical protein YP_002634831.1 decatenates replicating daughter chromosomes YP_002634832.1 InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002634833.1 (O07881) Glucose uptake protein glcU,InterPro: RhaT l-rhamnose-proton symport; Hypothetical protein YP_002634834.1 (P39483) Glucose 1-dehydrogenase II (EC 1.1.1.47) (GLCDH-II),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002634835.1 (P76519) Hypothetical protein yfdV,InterPro: Auxin Efflux Carrier; Conserved hypothetical protein YP_002634836.1 (Q63665) Upstream stimulatory factor 2 (Upstream transcription factor 2) (Major late transcription factor 2) (Fragment); Hypothetical protein YP_002634837.1 Hypothetical protein YP_002634838.1 Hypothetical protein YP_002634839.1 Hypothetical protein YP_002634840.1 hypothetical protein, similar to acriflavin resistance protein,putative transporter (AcrB/AcrD/AcrF family protein),(P25197) Nodulation protein nolG precursor,InterPro: Acriflavin resistance protein; Hypothetical protein YP_002634841.1 (P14305) Protein femB,InterPro: Methicillin resistance protein; Hypothetical protein YP_002634842.1 Hypothetical protein YP_002634843.1 (Q14203) Dynactin 1 (150 kDa dynein-associated polypeptide) (DP-150) (DAP-150) (p150-glued) (p135); Hypothetical protein YP_002634844.1 (P62087) Putative HTH-type transcriptional regulator SA2060,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002634845.1 similar to transporter proteins,(Q8Z4Z9) Hypothetical UPF0226 protein yfcJ,InterPro: Major facilitator superfamily; Hypothetical protein YP_002634846.1 (O07127) Hypothetical 16.5 kDa protein in ptsI 3region (ORFY); Hypothetical protein YP_002634847.1 Hypothetical protein YP_002634848.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis YP_002634849.1 Hypothetical protein YP_002634850.1 Hypothetical protein YP_002634851.1 Hypothetical protein YP_002634852.1 Hypothetical protein YP_002634853.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_002634854.1 Conserved hypothetical protein YP_002634855.1 (P38820) Hypothetical 49.4 kDa protein in CDC12-ORC6 intergenic region,InterPro: UBA/THIF-type NAD/FAD binding fold; Conserved hypothetical protein YP_002634856.1 ATP-binding protein of the molybdate-specific ABC,transporter ModABC; Conserved hypothetical protein YP_002634857.1 integral membrane-spanning protein of the,molybdate-specific ABC transporter ModABC; Conserved hypothetical protein YP_002634858.1 molybdate-binding lipoprotein of the,molybdate-specific ABC transporter ModABC,(P37329) Molybdate-binding periplasmic protein precursor,InterPro: Bacterial extracellular solute-binding protein family 1; Conserved hypothetical protein YP_002634859.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism YP_002634860.1 UDP-glucose-4-epimerase,(Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase),InterPro: UDP-glucose 4-epimerase; Conserved hypothetical protein YP_002634861.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism YP_002634862.1 Galactose operon repressor; Conserved hypothetical protein YP_002634863.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth YP_002634864.1 similar to acetyltransferase (GNAT) family protein,(P37504) Hypothetical protein yyaT,InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002634865.1 similar to biotin biosynthesis protein,(P22819) Protein bioY,InterPro: BioY protein; Conserved hypothetical protein YP_002634866.1 (P33022) Hypothetical protein yeiK,InterPro: Inosine/uridine-preferring nucleoside hydrolase; Conserved hypothetical protein YP_002634867.1 similar to butyryl-CoA dehydrogenase,(P52042) Acyl-CoA dehydrogenase short-chain specific (EC 1.3.99.2) (SCAD) (Butyryl-CoA dehydrogenase),InterPro: Acyl-CoA dehydrogenase C-terminal; Conserved hypothetical protein YP_002634868.1 similar to ferrichrome ABC transporter fhuD precursor,(P37580) Ferrichrome-binding protein precursor,InterPro: Periplasmic binding protein; Conserved hypothetical protein YP_002634869.1 similar to urea transporter,(Q13336) Urea transporter erythrocyte,InterPro: Urea transporter; Conserved hypothetical protein YP_002634870.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter YP_002634871.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Staphylococcus saprophyticus plays a role in bladder invasiveness and may induce the formation of kidney and bladder stones due to the alkalization of urine YP_002634872.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_002634873.1 involved in the assembly of the urease metallocenter; possible nickel donor YP_002634874.1 (Q07402) Urease accessory protein ureF,InterPro: Urease accessory protein UreF; Conserved hypothetical protein YP_002634875.1 (P42877) Urease accessory protein ureG,InterPro: Urease accessory protein UreG; Conserved hypothetical protein YP_002634876.1 (Q07400) Urease accessory protein ureD,InterPro: Urease accessory protein UreD; Conserved hypothetical protein YP_002634877.1 (O83536) ATP-dependent protease La (EC 3.4.21.53); Hypothetical protein YP_002634878.1 Hypothetical protein YP_002634879.1 (Q53218) Hypothetical 39.2 kDa protein y4vJ,InterPro: Bacterial luciferase,Note: Sequence published by Krismer,B., Montenbruck,I. and Goetz,F.(: Direct Submission; Submitted (02-APR-1997) Institut fuer Mikrobielle Genetik, Universitaet Tuebingen,Waldhaeuserstr. 70/8, Tuebingen 72076, Germany) is N-terminally prolonged by 48 aa.; Hypothetical protein YP_002634880.1 major secreted protein; Hypothetical protein YP_002634881.1 former orf4; Hypothetical protein YP_002634882.1 (P27611) Na(+)/H(+) antiporter (Sodium/proton antiporter) (Sodium/hydrogen antiporter),InterPro: Na+/H+ antiporter NhaC; Hypothetical protein YP_002634883.1 (P00385) OCS protein [Includes: D-lysopine dehydrogenase (EC 1.5.1.16) (Lysopine synthase); D-octopine dehydrogenase (EC 1.5.1.11) (Octopine synthase)],InterPro: NAD/NADP octopine/nopaline dehydrogenase; Conserved hypothetical protein YP_002634884.1 (Q58838) Hypothetical UPF0132 protein MJ1443; Hypothetical protein YP_002634885.1 (P49856) Hypothetical protein ykkC,InterPro: Small multidrug resistance protein; Hypothetical protein YP_002634886.1 (P49857) Hypothetical protein ykkD,InterPro: Small multidrug resistance protein; High confidence in function and specificity YP_002634887.1 (Q8U3Y2) Glyoxylate reductase (EC 1.1.1.26) (Glycolate reductase),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein YP_002634888.1 similar to monooxygenase,(P93236) Zeaxanthin epoxidase chloroplast precursor (EC 1.14.-.-),InterPro: Flavoprotein monooxygenase; Hypothetical protein YP_002634889.1 similar to autolysin E,(P52081) Bifunctional autolysin precursor [Includes: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28); Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase (EC 3.2.1.96)],InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Hypothetical protein YP_002634890.1 Hypothetical protein YP_002634891.1 (O05396) Hypothetical protein yrhD; Hypothetical protein YP_002634892.1 similar to putative bifunctional protein (Staphylococcus aureus subsp. aureus MRSA252),(P61159) Formate dehydrogenase alpha chain (EC 1.2.1.2),InterPro: Formate dehydrogenase alpha subunit; Hypothetical protein YP_002634893.1 Hypothetical protein YP_002634894.1 Hypothetical protein YP_002634895.1 similar to lyt divergon expression attenuator LytR,(Q81K33) Membrane-bound protein lytR,InterPro: Cell envelope-related transcriptional attenuator; Hypothetical protein YP_002634896.1 (Q45499) Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase) (Inositol-1-phosphatase) (I-1-Pase),InterPro: Inositol monophosphatase; Conserved hypothetical protein YP_002634897.1 (P52598) Putative HTH-type transcriptional regulator ygbI,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein YP_002634898.1 InterPro: Abortive infection protein; Hypothetical protein YP_002634899.1 Hypothetical protein YP_002634900.1 (O68281) HTH-type transcriptional regulator hexR (Hex regulon repressor),InterPro: Helix-turn-helix protein RpiR,Similar to N-terminus of putative transcriptional regulator [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300683); Hypothetical protein YP_002634901.1 Similar to C-terminal part of putative transcriptional regulator [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300683),(Q45581) Putative HTH-type transcriptional regulator ybbH; Hypothetical protein YP_002634902.1 (P54425) Hypothetical transport protein ybxG,InterPro: Amino acid permease-associated region; Hypothetical protein YP_002634903.1 Hypothetical protein YP_002634904.1 similar to formate/nitrite transporter,(P38750) Hypothetical 70.0 kDa protein in PRPS4-STE20 intergenic region,InterPro: Formate/nitrite transporter; Hypothetical protein YP_002634905.1 (P41656) Hypothetical 19.8 kDa protein in P143-LEF5 intergenic region; Hypothetical protein YP_002634906.1 Hypothetical protein YP_002634907.1 Hypothetical protein YP_002634908.1 similar to haloacid dehalogenase-like hydrolase,(P54607) Hypothetical protein yhcW,InterPro: Haloacid dehalogenase-like hydrolase; Hypothetical protein YP_002634909.1 (Q9XDH6) DNA polymerase III alpha subunit (EC 2.7.7.7); Hypothetical protein YP_002634910.1 (P08194) Glycerol-3-phosphate transporter (G-3-P transporter) (G-3-P permease),InterPro: Glycerol-3-phosphate transporter; Conserved hypothetical protein YP_002634911.1 (Q8VEE1) LIM and cysteine-rich domains protein,InterPro: Protein of unknown function DUF704; Hypothetical protein YP_002634912.1 similar to Na+/H+ antiporter,(P54571) Malate-2H(+)/Na(+)-lactate antiporter,InterPro: Na+/H+ antiporter NhaC; Hypothetical protein YP_002634913.1 (O05220) Hypothetical protein ywrF; Hypothetical protein YP_002634914.1 (P25887) Hypothetical oxidoreductase yghA (EC 1.-.-.-),InterPro: Short-chain dehydrogenase/reductase SDR; Conserved hypothetical protein YP_002634915.1 (P54955) Hypothetical protein yxeP,InterPro: Peptidase M20/M25/M40; Conserved hypothetical protein YP_002634916.1 Hypothetical protein YP_002634917.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_002634918.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_002634919.1 (P30267) Hypothetical 50.9 kDa protein in katA 3region (ORF A); Hypothetical protein YP_002634920.1 similar to transcriptional regulator LysR family protein,(P39592) Putative HTH-type transcriptional regulator ywbI,InterPro: LysR substrate binding domain; Hypothetical protein YP_002634921.1 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate YP_002634922.1 C terminal 298 AA similar to Staph epidermidis conserved protein; Hypothetical protein YP_002634923.1 catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway YP_002634924.1 (P40681) Aldose 1-epimerase (EC 5.1.3.3) (Mutarotase),InterPro: Aldose 1-epimerase; Hypothetical protein YP_002634925.1 (Q99RT4) Hypothetical UPF0060 protein SAV2339/SA2130/MW2259,InterPro: Protein of unknown function UPF0060; Hypothetical protein YP_002634926.1 (O07523) Hypothetical protein yhaP; Hypothetical protein YP_002634927.1 (P26946) Hypothetical ABC transporter ATP-binding protein,InterPro: ABC transporter; Hypothetical protein YP_002634928.1 Hypothetical protein YP_002634929.1 (O28481) Putative HTH-type transcriptional regulator AF1793,InterPro: Helix-turn-helix motif; Hypothetical protein YP_002634930.1 (P42621) Hypothetical protein yhaH,InterPro: Protein of unknown function DUF805; Hypothetical protein YP_002634931.1 similar to aa 1 - 167 of hypothetical protein SSP0562 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300652),Note: this protein is similar to the same database best hit as Sca_1841 and Sca_1842.; Hypothetical protein YP_002634932.1 Similar to aa 113 - 173 of hypothetical protein SSP0562 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300652) length 232 aa; Hypothetical protein YP_002634933.1 (P42621) Hypothetical protein yhaH,InterPro: Protein of unknown function DUF805,Similar to N-terminal part of hypothetical protein SSP0562 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300652): aa 1 - 105; Hypothetical protein YP_002634934.1 (Q8CRC1) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-),InterPro: Methylpurine-DNA glycosylase (MPG); Conserved hypothetical protein YP_002634935.1 (P45080) Anaerobic ribonucleoside-triphosphate reductase activating protein (EC 1.97.1.4) (Class III anaerobic ribonucleotide reductase small component); Conserved hypothetical protein YP_002634936.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_002634937.1 Hypothetical protein YP_002634938.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_002634939.1 similar to divalent cation transport ,(P43553) Aluminum resistance protein,InterPro: Magnesium and cobalt transport protein CorA; Hypothetical protein YP_002634940.1 (Q8NZJ4) N utilization substance protein B homolog (NusB protein); Hypothetical protein YP_002634941.1 (P06739) Hemolysin secretion protein D plasmid; Hypothetical protein YP_002634942.1 Hypothetical protein YP_002634943.1 similar to multidrug resistance proteins,(P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Hypothetical protein YP_002634944.1 (P76185) Hypothetical protein ydhJ; Hypothetical protein YP_002634945.1 similar to TetR family regulatory protein,(P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein YP_002634946.1 (P96706) Putative membrane protein ydgH; Hypothetical protein YP_002634947.1 similar to transporter, (to B. subtilis YdgH protein),(P96706) Putative membrane protein ydgH,InterPro: Sterol-sensing 5TM box; Hypothetical protein YP_002634948.1 Hypothetical protein YP_002634949.1 Hypothetical protein YP_002634950.1 similar to TcaR transcriptional regulator Staphylococcus epidermidis,(Q8NVA6) Putative HTH-type transcriptional regulator MW2183,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002634951.1 (P33017) SanA protein,InterPro: Protein of unknown function DUF218; Hypothetical protein YP_002634952.1 (Q58903) Hypothetical ABC transporter ATP-binding protein MJ1508,InterPro: ABC transporter; Hypothetical protein YP_002634953.1 (Q50735) Hypothetical protein Rv2563/MT2639/Mb2592 precursor,InterPro: Protein of unknown function DUF214; Hypothetical protein YP_002634954.1 similar to two component histidine kinase sensor,(P94414) Hypothetical sensor-like histidine kinase yclK (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634955.1 similar to two component histidine kinase sensor,(P94414) Hypothetical sensor-like histidine kinase yclK (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634956.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_002634957.1 (O05083) Putative glycosyl transferase HI1698 (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein YP_002634958.1 (Q9K5Z9) L-lactate permease,InterPro: L-lactate permease; Hypothetical protein YP_002634959.1 (Q8RKI5) Putative CDP-glycerol:glycerophosphate glycerophosphotransferase tarF (EC 2.7.8.-),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein YP_002634960.1 (O85467) Spore germination protein gerIA; Hypothetical protein YP_002634961.1 (P26646) Protein yhdH,InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein YP_002634962.1 similar to bicyclomycin resistance protein TcaB (Staphylococcus epidermides),(P46333) Probable metabolite transport protein csbC,InterPro: Sugar transporter; Hypothetical protein YP_002634963.1 similar to thioredoxin reductase ,(P52214) Thioredoxin reductase (EC 1.8.1.9) (TRXR) (TR),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein YP_002634964.1 (P59641) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes: Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains: Leader protein; p65 homolog; NSP1 (EC 3.4.24.-) (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC 3.4.24.-) (3CL-PRO) (3; Hypothetical protein YP_002634965.1 similar to MarR family regulatory protein,(P55740) Transcriptional regulator slyA,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002634966.1 similar to cationic transporter,(Q58439) CorA-like protein,InterPro: Mg2+ transporter protein CorA-like; Hypothetical protein YP_002634967.1 Hypothetical protein YP_002634968.1 (P48785) Pathogenesis-related homeodomain protein (PRHA); Hypothetical protein YP_002634969.1 (P24943) Proton/sodium-glutamate symport protein (Glutamate-aspartate carrier protein),InterPro: Sodium:dicarboxylate symporter; Conserved hypothetical protein YP_002634970.1 (P96661) Hypothetical transport protein ydeD,InterPro: Protein of unknown function DUF6; Hypothetical protein YP_002634971.1 Hypothetical protein YP_002634972.1 similar to transcriptional regulator,(O34777) Organic hydroperoxide resistance transcriptional regulator,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002634973.1 (O30851) Heat shock protein HSP.16.4,InterPro: Heat shock protein Hsp20; Hypothetical protein YP_002634974.1 (P13702) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC 1.1.1.88) (HMG-CoA reductase),InterPro: Hydroxymethylglutaryl-coenzyme A reductase; Hypothetical protein YP_002634975.1 (Q46939) Probable acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase),InterPro: Thiolase; Hypothetical protein YP_002634976.1 former orf1; similar to condensing-enzymes;,(P40830) Putative polyketide biosynthesis protein pksG,InterPro: Hydroxymethylglutaryl-coenzyme A synthase; Hypothetical protein YP_002634977.1 former orf2, similar to SpoVE, RodA, and FtsW;,(O07639) Hypothetical protein ylaO,InterPro: Cell cycle protein; Hypothetical protein YP_002634978.1 Hypothetical protein YP_002634979.1 as part of NreBC controls genes involved in,nitrate and nitrite reduction,(Q51373) Response regulator gacA (Global activator),InterPro: Response regulator receiver; Hypothetical protein YP_002634980.1 as part of NreBC controls genes involved in,nitrate and nitrite reduction,P29905) Methanol utilization control sensor protein moxY (EC 2.7.3.-),InterPro: Histidine kinase; Hypothetical protein YP_002634981.1 similar to the N-terminus of NifA of Azospirillum,brasilense,(Q06407) Rho-type GTPase-activating protein; Hypothetical protein YP_002634982.1 similar to Escherichia coli nitrate reductases NRA,and NRZ gamma subunits,(P19316) Respiratory nitrate reductase 2 gamma chain (EC 1.7.99.4),InterPro: Nitrate reductase gamma subunit; Hypothetical protein YP_002634983.1 similar to Escherichia coli nitrate reductases NRA,and NRZ delta subunits,(P42178) Nitrate reductase delta chain (EC 1.7.99.4),InterPro: Nitrate reductase delta subunit; Hypothetical protein YP_002634984.1 (P42176) Nitrate reductase beta chain (EC 1.7.99.4),InterPro: Nitrate reductase beta subunit; Hypothetical protein YP_002634986.1 similar to C-terminus of Escherichia coli CysG,(P42437) Uroporphyrin-III C-methyltransferase (EC 2.1.1.107) (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM),InterPro: Uroporphyrin-III C-methyltransferase C-terminal; Hypothetical protein YP_002634987.1 similar to Escherichia coli NADH-dependent nitrite,reductase small subunit NirD,(P42436) Assimilatory nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4),InterPro: Rieske [2Fe-2S] domain; Hypothetical protein YP_002634988.1 Nitrite reductase,(P42435) Nitrite reductase [NAD(P)H] (EC 1.7.1.4),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Hypothetical protein YP_002634989.1 similar to N-terminus of Escherichia coli CysG; Hypothetical protein YP_002634990.1 involved in nitrite reduction; Hypothetical protein YP_002634992.1 Hypothetical protein YP_002634993.1 (P35453) Homeobox protein Hox-D13 (Hox-4I),InterPro: Protein of unknown function DUF704; Hypothetical protein YP_002634994.1 (Q7N562) Hypothetical UPF0312 protein plu2095 precursor,InterPro: YceI; Hypothetical protein YP_002634995.1 similar to cobalamin synthesis related protein CobW,(P29937) CobW protein,InterPro: Cobalamin synthesis protein/P47K; Hypothetical protein YP_002634996.1 (Q57986) Ferrous iron transport protein B; Hypothetical protein YP_002634997.1 (P50736) Hypothetical protein ypdA,InterPro: NAD-binding site; Hypothetical protein YP_002634998.1 (O32218) Disulfide bond formation protein D precursor (Disulfide oxidoreductase D) (Thiol-disulfide oxidoreductase D); Hypothetical protein YP_002634999.1 similar to ABC transporter, ATP binding subunit ,(P54537) Probable amino-acid ABC transporter ATP-binding protein yqiZ,InterPro: ABC transporter; Hypothetical protein YP_002635000.1 similar to ABC transporter, permease protein ,(P76315) Hypothetical amino-acid ABC transporter permease protein yecS,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002635001.1 similar to extracellular solute-binding lipoprotein,(P45024) Probable amino-acid ABC transporter binding protein HI1080 precursor,InterPro: Bacterial extracellular solute-binding protein family 3; Hypothetical protein YP_002635002.1 Hypothetical protein YP_002635003.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate YP_002635004.1 (Q8CMZ9) Immunodominant staphylococcal antigen A precursor; Hypothetical protein YP_002635005.1 (P46348) Hypothetical UPF0018 protein yeaB,InterPro: Cation efflux protein; Hypothetical protein YP_002635006.1 (Q9CDA3) Hypothetical protein ML0110,InterPro: GtrA-like protein; Hypothetical protein YP_002635007.1 similar to bicyclomycin resistance protein TcaB,(P45123) Bicyclomycin resistance protein homolog,InterPro: Major facilitator superfamily; Hypothetical protein YP_002635008.1 Hypothetical protein YP_002635009.1 (P96704) Hypothetical transport protein ydgF,InterPro: Amino acid permease-associated region; Hypothetical protein YP_002635010.1 (P26093) Lipoprotein E precursor (Outer membrane protein P4) (OMP P4),InterPro: 5-nucleotidase lipoprotein e(P4); Conserved hypothetical protein YP_002635011.1 similar to putative membrane proteins and amino acid transporters.,(P33016) Hypothetical transport protein yeeF,InterPro: Amino acid/polyamine transporter family I; Hypothetical protein YP_002635012.1 similar to beta-lactamase,similar to fmtA-like protein (Staphylococcus aureus),(P00811) Beta-lactamase precursor (EC 3.5.2.6) (Cephalosporinase),InterPro: Beta-lactamase; Hypothetical protein YP_002635013.1 (P27304) Multidrug resistance protein B,InterPro: General substrate transporter; Hypothetical protein YP_002635014.1 (Q8CR79) Sensor protein lytS (EC 2.7.3.-),InterPro: GAF domain; Hypothetical protein YP_002635015.1 (P60609) Sensory transduction protein lytR,InterPro: Response regulator AlgR/VirR/ComE type; Hypothetical protein YP_002635016.1 similar to ,(P60649) Antiholin-like protein lrgA,InterPro: LrgA family; Hypothetical protein YP_002635017.1 in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases YP_002635018.1 (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propionyl-CoA synthetase); Hypothetical protein YP_002635019.1 (O54990) Prominin 1 precursor (Prominin-like protein 1) (Antigen AC133 homolog); Hypothetical protein YP_002635020.1 similar to transcriptional regulator TetR family (Bacillus subtilis),similar to transcriptional regulator AcrR family (Staphylococcus epidermidis),(Q10774) Putative HTH-type transcriptional regulator Rv1556/MT1607/Mb1581,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein YP_002635021.1 similar to acetyl esterase (Caldocellum saccharolyticum),similar to tributyrin esterase (Staphylococcus epidermidis) ,(P23553) Acetyl esterase (EC 3.1.-.-) (Acetylxylosidase),InterPro: Putative esterase; Hypothetical protein YP_002635022.1 (O34742) Glycine betaine/carnitine/choline transport system permease protein opuCD,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002635023.1 (O32243) Glycine betaine/carnitine/choline-binding protein precursor (Osmoprotectant-binding protein),InterPro: Substrate-binding region of ABC-type glycine betaine transport system; Hypothetical protein YP_002635024.1 (O34878) Glycine betaine/carnitine/choline transport system permease protein opuCB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002635025.1 (Q45460) Choline transport ATP-binding protein opuBA,InterPro: Glycine betaine/L-proline transport ATP-binding subunit; Hypothetical protein YP_002635026.1 (O75146) Huntingtin interacting protein 1 related (Hip1-related) (Hip 12); Hypothetical protein YP_002635027.1 similar to L-aspartate transporter in Bacillus subtilis,(O07002) Asparate-proton symporter (L-aspartate transporter),InterPro: Amino acid permease-associated region; Hypothetical protein YP_002635028.1 similar to para-nitrobenzyl esterase chain A (Bacillus subtilis),(P37967) Para-nitrobenzyl esterase (EC 3.1.1.-) (PNB carboxy-esterase) (PNBCE),InterPro: Carboxylesterase type B; Hypothetical protein YP_002635029.1 similar to chloramphenicol resistance protein,(P44535) Probable sugar efflux transporter,InterPro: General substrate transporter; Hypothetical protein YP_002635030.1 (P77307) Hypothetical UPF0014 membrane protein ybbM,InterPro: Conserved hypothetical protein 245; Hypothetical protein YP_002635031.1 (P77279) Hypothetical ABC transporter ATP-binding protein ybbL,InterPro: ABC transporter; Hypothetical protein YP_002635032.1 truncated ORF, similar to protein of pXO2-46 ,(P45613) Hypothetical 37.9 kDa protein in ptsH 3region (ORF1),InterPro: Abortive infection protein; Hypothetical protein YP_002635033.1 similar to protein of pXO2-46, incomplete alignment,(Q13315) Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated) (A-T mutated),InterPro: Abortive infection protein; Hypothetical protein YP_002635034.1 (P33385) Hypothetical lipoprotein Lmo0207 precursor; Hypothetical protein YP_002635035.1 (P44828) Putative exopolyphosphatase (EC 3.6.1.11) (Metaphosphatase),InterPro: Ppx/GppA phosphatase; Hypothetical protein YP_002635036.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_002635037.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_002635038.1 Hypothetical protein YP_002635039.1 (P12012) Gluconate permease,InterPro: Gluconate transporter; Hypothetical protein YP_002635040.1 (P12011) Gluconokinase (EC 2.7.1.12) (Gluconate kinase),InterPro: Gluconate kinase; Hypothetical protein YP_002635041.1 (P10585) Gluconate operon transcriptional repressor (P28 protein),InterPro: Bacterial regulatory protein GntR family; Hypothetical protein YP_002635042.1 (P21341) Protease synthase and sporulation negative regulatory protein PAI,InterPro: Negative transcriptional regulator; Hypothetical protein YP_002635043.1 (P06800) Leukocyte common antigen precursor (EC 3.1.3.48) (L-CA) (Lymphocyte common antigen Ly-5) (CD45) (T200); Hypothetical protein YP_002635044.1 (Q06716) ATP-dependent protease ATP-binding subunit clpL,InterPro: AAA ATPase central region; Hypothetical protein YP_002635045.1 (P39583) Hypothetical protein ywaC,InterPro: RelA/SpoT; Hypothetical protein YP_002635046.1 (P31521) 47 kDa protein (P47K),InterPro: Cobalamin synthesis protein/P47K; Hypothetical protein YP_002635047.1 (Q8TV85) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine adenosyltransferase) (AdoMet synthetase); Hypothetical protein YP_002635048.1 (P45537) Hypothetical protein yhfK; Hypothetical protein YP_002635049.1 (Q04518) Alpha-acetolactate decarboxylase (EC 4.1.1.5),InterPro: Alpha-acetolactate decarboxylase; Conserved hypothetical protein YP_002635050.1 (P73602) Hypothetical protein sll1783,InterPro: Antibiotic biosynthesis monooxygenase; Hypothetical protein YP_002635051.1 (P42237) Probable glucarate transporter (D-glucarate permease),InterPro: General substrate transporter; Conserved hypothetical protein YP_002635052.1 (Q9CHL6) Alkaline phosphatase like protein,InterPro: DedA family; Hypothetical protein YP_002635053.1 (Q18879) Caveolin-2; Hypothetical protein YP_002635054.1 (P72335) Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I),InterPro: ABC transporter; Conserved hypothetical protein YP_002635055.1 (Q82WQ0) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Conserved hypothetical protein YP_002635056.1 High confidence in function and specificity YP_002635057.1 (O33813) Lactose operon transcription activator,InterPro: Helix-turn-helix AraC type; High confidence in function and specificity YP_002635058.1 (O33814) Lactose permease (Lactose-proton symport) (Lactose transport protein),InterPro: Sodium:galactoside symporter; High confidence in function and specificity YP_002635059.1 (Q9WXE6) Chlorohydroquinone/hydroquinone 12-dioxygenase (EC 1.13.11.-) (Hydroquinone meta-cleavage dioxygenase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Conserved hypothetical protein YP_002635060.1 (P54182) Putative HTH-type transcriptional regulator ypoP,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002635061.1 similar to Zn-binding lipoprotein adcA,(Q9L5X1) Manganese ABC transporter substrate-binding lipoprotein precursor (Pneumococcal surface adhesin A),InterPro: Periplasmic solute binding protein; Hypothetical protein YP_002635062.1 (P39274) Hypothetical protein yjdJ; Hypothetical protein YP_002635063.1 (P35598) Putative ABC transporter ATP-binding protein exp8 (Exported protein 8),InterPro: ABC transporter transmembrane region; Hypothetical protein YP_002635064.1 (P77265) Multidrug resistance-like ATP-binding protein mdlA,InterPro: ABC transporter transmembrane region; High confidence in function and specificity YP_002635065.1 (Q99RB1) D-lactate dehydrogenase (EC 1.1.1.28) (D-LDH) (D-specific D-2-hydroxyacid dehydrogenase),InterPro: D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain; Hypothetical protein YP_002635066.1 (O34475) Putative NAD(P)H nitroreductase yfkO (EC 1.-.-.-),InterPro: Nitroreductase family; Hypothetical protein YP_002635067.1 (P96674) Putative NAD(P)H oxidoreductase ydeQ (EC 1.6.99.-),InterPro: NAD(P)H dehydrogenase (quinone); Hypothetical protein YP_002635068.1 Hypothetical protein YP_002635069.1 (P16095) L-serine dehydratase 1 (EC 4.3.1.17) (L-serine deaminase 1) (SDH 1) (L-SD1),InterPro: L-serine dehydratase alpha subunit; Hypothetical protein YP_002635070.1 (P33074) L-serine dehydratase beta chain (EC 4.3.1.17) (L-serine deaminase) (SDH) (L-SD),InterPro: Iron-sulfur-dependent L-serine dehydratase beta subunit; Hypothetical protein YP_002635071.1 similar to C-terminal part (67-340) of perfringolysin O regulator protein, putative [Staphylococcus epidermidis RP62A] (YP_189652) (347 aa).; Hypothetical protein YP_002635072.1 similar to N-terminal part (aa 1-44) of perfringolysin O regulator protein (347 aa, putative [Staphylococcus epidermidis RP62A] (YP_189652).; Hypothetical protein YP_002635073.1 (P27470) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I) (Dextransucrase) (Sucrose 6-glucosyltransferase); Hypothetical protein YP_002635074.1 (P25144) Catabolite control protein A (Glucose-resistance amylase regulator),InterPro: Periplasmic binding protein/LacI transcriptional regulator; Hypothetical protein YP_002635075.1 local similarity to lysophospholipase ,(P25026) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride peroxidase) (CPO-P) (Chloroperoxidase P),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002635076.1 (P23516) High-affinity nickel transport protein,InterPro: High-affinity nickel-transport protein; Hypothetical protein YP_002635077.1 (O07923) Branched-chain amino acid transport protein azlD,InterPro: Branched-chain amino acid transport; Hypothetical protein YP_002635078.1 C-terminal part similar to branched-chain amino acid transport protein (Bacillus subtilis),(Q9ZJQ3) Hypothetical protein JHP1251,InterPro: AzlC protein; Hypothetical protein YP_002635079.1 similar to ribosomal-protein-serine N-acetyltransferase,P13857) Ribosomal-protein-serine acetyltransferase (EC 2.3.1.-) (Acetylating enzyme for N-terminal of ribosomal protein L7/L12),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002635080.1 similar to 2-pyrone-4,6-dicarboxylate hydrolase (Coxiella burnetii),(Q9ZNL9) Pesticidial crystal protein cry9Ea (Insecticidal delta-endotoxin CryIXE(a)) (Crystaline entomocidal protoxin) (130 kDa crystal protein); Hypothetical protein YP_002635081.1 catalyzes the formation of acetyl phosphate from pyruvate YP_002635082.1 (P60637) Holin-like protein cidB,InterPro: LrgB-like protein; Hypothetical protein YP_002635083.1 (P60645) Holin-like protein cidA,InterPro: LrgA family; Hypothetical protein YP_002635084.1 (P39592) Putative HTH-type transcriptional regulator ywbI,InterPro: LysR substrate binding domain; Hypothetical protein YP_002635085.1 (P75831) Macrolide-specific ABC-type efflux carrier,InterPro: Protein of unknown function DUF214; Hypothetical protein YP_002635086.1 (Q58206) ABC transporter ATP-binding protein MJ0796,InterPro: ABC transporter; Hypothetical protein YP_002635087.1 (P76397) Hypothetical protein yegM precursor; Hypothetical protein YP_002635088.1 Hypothetical protein YP_002635089.1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002635090.1 (Q8PY44) Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase),InterPro: Methylated-DNA-[protein]-cysteine S-methyltransferase; Hypothetical protein YP_002635091.1 truncated orf,small local similarity to:,(P80544) Surface protein precursor (Plasmin-sensitive surface protein) (230 kDa cell-wall protein),InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein YP_002635092.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_002635093.1 (P53109) Hypothetical 65.8 kDa protein in SUT1-RCK1 intergenic region,InterPro: Sortase protein; Hypothetical protein YP_002635094.1 Hypothetical protein YP_002635095.1 Hypothetical protein YP_002635096.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds YP_002635097.1 (Q8ZGY6) Zinc transporter zitB,InterPro: Cation efflux protein; Hypothetical protein YP_002635098.1 (Q04605) Hypothetical protein in chlN 3region (URF2) (Fragment),InterPro: Protein of unknown function DUF344; Hypothetical protein YP_002635099.1 (Q87PM1) Hypothetical protein VP1481,InterPro: Fructosamine kinase; Hypothetical protein YP_002635100.1 local similarity to regulatory protein (pfoS/R) (Bacillus cereus),(P19357) Solute carrier family 2 facilitated glucose transporter member 4 (Glucose transporter type 4 insulin-responsive),InterPro: Phosphotransferase system EIIC; Hypothetical protein YP_002635101.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose YP_002635102.1 (P77836) Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) (PYNP),InterPro: Thymidine/pyrimidine-nucleoside phosphorylase; Conserved hypothetical protein YP_002635103.1 (Q9ZUC1) Quinone oxidoreductase-like protein At1g23740,InterPro: Zinc-containing alcohol dehydrogenase superfamily; Hypothetical protein YP_002635104.1 Hypothetical protein YP_002635105.1 (Q92A77) Menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-),InterPro: UbiE/COQ5 methyltransferase; Conserved hypothetical protein YP_002635106.1 (O68575) Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) (PFL-activating enzyme),InterPro: Radical SAM; High confidence in function and specificity YP_002635107.1 (P09373) Formate acetyltransferase 1 (EC 2.3.1.54) (Pyruvate formate-lyase 1),InterPro: Formate acetyltransferase; High confidence in function and specificity YP_002635108.1 (P76243) Hypothetical protein yeaO,InterPro: Protein of unknown function DUF488; Hypothetical protein YP_002635109.1 (P54493) Hypothetical protein yqgP; Hypothetical protein YP_002635110.1 (Q82Z76) Sensory transduction protein lytT,InterPro: LytTr DNA-binding region; Hypothetical protein YP_002635111.1 similar to C-terminal part (aa 135-236) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03778):238 aa,(P44068) Protein HI0882; Hypothetical protein YP_002635112.1 similar to N-terminal part (aa 1-131) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE0377): 238 aa ,(P44068) Protein HI0882; Hypothetical protein YP_002635113.1 (O32975) Probable cysteine desulfurase 1 (EC 2.8.1.7); Hypothetical protein YP_002635114.1 (Q50777) Hypothetical 16.1 kDa protein in MTR region (ORF143),InterPro: Usp domain; Hypothetical protein YP_002635115.1 (Q05852) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) (General stress protein 33) (GSP33),InterPro: Nucleotidyl transferase; High confidence in function and specificity YP_002635116.1 (P39853) Capsular polysaccharide biosynthesis protein capD,InterPro: Polysaccharide biosynthesis protein CapD; Conserved hypothetical protein YP_002635117.1 similar to capA, capsular polysaccharide synthesis enzyme (chain length regulator),(P71050) Hypothetical protein yveK,InterPro: Lipopolysaccharide biosynthesis; Hypothetical protein YP_002635118.1 (Q57987) Hypothetical protein MJ0567,InterPro: FeoA; Hypothetical protein YP_002635119.1 (Q57986) Ferrous iron transport protein B homolog,InterPro: Ferrous iron transport protein B; Conserved hypothetical protein YP_002635120.1 Hypothetical protein YP_002635121.1 putative transcriptional regulator,(P39044) Hypothetical protein X,InterPro: Transcriptional regulator PadR-like family; Hypothetical protein YP_002635122.1 similarity to serine/threonine protein phosphatase (Bacillus),(Q8EB91) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002635123.1 similarity to serine/threonine protein phosphatase (Bacillus),(Q8EB91) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002635124.1 (P09454) Ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) (Acetylating enzyme for N-terminal of ribosomal protein S5),InterPro: GCN5-related N-acetyltransferase; Conserved hypothetical protein YP_002635125.1 similarity to hypothetical protein (Staph aureus); Hypothetical protein YP_002635126.1 (P39211) Xylulose kinase (EC 2.7.1.17) (Xylulokinase),InterPro: Xylulokinase; Conserved hypothetical protein YP_002635127.1 (Q8R7S2) Probable manganese transport protein mntH; Hypothetical protein YP_002635128.1 (Q9V005) Hypothetical UPF0271 protein PYRAB09930,InterPro: LamB/YcsF family; Hypothetical protein YP_002635129.1 (Q96RQ3) Methylcrotonyl-CoA carboxylase alpha chain mitochondrial precursor (EC 6.4.1.4) (3-Methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase alpha subunit),InterPro: Carbamoyl-phosphate synthase L chain ATP-binding; Conserved hypothetical protein YP_002635130.1 (Q9PKR5) Biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP),InterPro: Biotin/lipoyl attachment; Hypothetical protein YP_002635131.1 (P75745) Hypothetical protein ybgK,InterPro: Urea amidolyase-related; Hypothetical protein YP_002635132.1 (P60495) Kinase A inhibitor (Sporulation inhibitor kipI),InterPro: Protein of unknown function DUF213; Hypothetical protein YP_002635133.1 similar to regulatory protein pfoS/R; Hypothetical protein YP_002635134.1 (Q03646) Merozoite surface antigen 2 precursor (MSA-2),InterPro: Uncharacterized iron-regulated membrane protein DUF337; Hypothetical protein YP_002635135.1 (P41900) Transcription initiation factor IIF beta subunit (TFIIF-beta); Conserved hypothetical protein YP_002635136.1 (Q8VCL5) Putative transporter C20orf59 homolog,InterPro: General substrate transporter; Hypothetical protein YP_002635137.1 similar to C-terminal part (110-366) of putative truncated ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305](YP_302396): 368 aa,(P76242) Hypothetical transport protein yeaN,InterPro: Major facilitator superfamily; Hypothetical protein YP_002635138.1 Similar to N-terminal part (aa 1-108) of putative truncated ABC transporter permease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_302396): 368 aa; Hypothetical protein YP_002635139.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP YP_002635140.1 (P77297) Hypothetical protein yahE; Hypothetical protein YP_002635141.1 (P77129) Hypothetical protein ylbE; Hypothetical protein YP_002635142.1 multicopy suppressor of dominant negative ftsH mutations YP_002635143.1 (P58408) Ureidoglycolate dehydrogenase (EC 1.1.1.154),InterPro: Malate/L-lactate dehydrogenase; Hypothetical protein YP_002635144.1 (O34736) Hypothetical oxidoreductase yjmC (EC 1.1.1.-),InterPro: Malate/L-lactate dehydrogenase; Hypothetical protein YP_002635145.1 (P75713) Hypothetical protein ylbA; Hypothetical protein YP_002635146.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_002635147.1 (O35678) Monoglyceride lipase (EC 3.1.1.23),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002635148.1 (Q86WA6) Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase) (Biphenyl hydrolase-like protein) (Biphenyl hydrolase-related protein) (Bph-rp) (Breast epithelial mucin-associated antigen) (MCNAA); Hypothetical protein YP_002635149.1 (P77671) Allantoinase (EC 3.5.2.5),InterPro: Amidohydrolase; Conserved hypothetical protein YP_002635150.1 Truncated ORF.,Local similarity to:,(P77671) Allantoinase (EC 3.5.2.5),InterPro: Dihydroorotase region; Hypothetical protein YP_002635151.1 (P75712) Putative allantoin permease (Allantoin transport protein),InterPro: Permease for cytosine/purines uracil thiamine allantoin; Conserved hypothetical protein YP_002635152.1 similar to (O32138) Purine catabolism regulatory protein; Conserved hypothetical protein YP_002635153.1 (Q57051) Protein HI0588,InterPro: Peptidase M20/M25/M40; Conserved hypothetical protein YP_002635154.1 similar to transcriptional regulator, MerR family,Incomplete alignment.,Similar to MerR family regulatory protein,(P32184) HTH-type transcriptional activator tipA; Hypothetical protein YP_002635155.1 (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase),InterPro: NAD-dependent epimerase/dehydratase; Conserved hypothetical protein YP_002635156.1 Hypothetical protein YP_002635157.1 (Q50644) Hypothetical protein Rv2577/MT2654,InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002635158.1 (O34450) N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (GlcNAc 6-P deacetylase),InterPro: N-acetylglucosamine-6-phosphate deacetylase; Conserved hypothetical protein YP_002635159.1 (P17407) 21 kDa protein precursor (1.2 protein); Hypothetical protein YP_002635160.1 (P75260) Hypothetical UPF0134 protein MPN138 (E07_orf166); Hypothetical protein YP_002635161.1 (Q50648) Putative 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR),InterPro: Ketopantoate reductase ApbA/PanE; Conserved hypothetical protein YP_002635162.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002635163.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002635164.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_002635165.1 low similarity to:,(P04188) Glutamyl endopeptidase precursor (EC 3.4.21.19) (Staphylococcal serine proteinase) (V8 proteinase) (Endoproteinase Glu-C); Hypothetical protein YP_002635166.1 similar to:,(P25053) Regulatory protein tenI,InterPro: Thiamine monophosphate synthase; Hypothetical protein YP_002635167.1 (O31616) Glycine oxidase (EC 1.4.3.19),InterPro: FAD dependent oxidoreductase; Conserved hypothetical protein YP_002635168.1 similar to thiamin biosynthesis ThiS [KO:K03154],(P49535) Hypothetical 8.5 kDa protein ycf40 (ORF73),InterPro: ThiamineS; Hypothetical protein YP_002635169.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_002635170.1 (P12282) Molybdopterin biosynthesis protein moeB,InterPro: UBA/THIF-type NAD/FAD binding fold; Hypothetical protein YP_002635171.1 Hypothetical protein YP_002635172.1 (P46908) Anaerobic regulatory protein,InterPro: Cyclic nucleotide-binding domain; Conserved hypothetical protein YP_002635173.1 (P46908) Anaerobic regulatory protein,InterPro: Cyclic nucleotide-binding domain; Conserved hypothetical protein YP_002635174.1 (Q46170) Arginine/ornithine antiporter,InterPro: Arginine/ornithine antiporter; Conserved hypothetical protein YP_002635175.1 catalyzes the degradation of arginine to citruline and ammonia YP_002635176.1 catalyzes the degradation of arginine to citruline and ammonia YP_002635177.1 Hypothetical protein YP_002635178.1 (P77525) Probable beta-ketoadipyl CoA thiolase (EC 2.3.1.-),InterPro: Thiolase; Hypothetical protein YP_002635179.1 (P58730) O-succinylbenzoate--CoA ligase (EC 6.2.1.26) (OSB-CoA synthetase) (O-succinylbenzoyl-CoA synthetase),InterPro: AMP-dependent synthetase and ligase; Conserved hypothetical protein YP_002635180.1 (P09392) Glycerol-3-phosphate regulon repressor; Hypothetical protein YP_002635181.1 (P60527) 2-haloalkanoic acid dehalogenase (EC 3.8.1.2) (L-2-haloacid dehalogenase) (Halocarboxylic acid halidohydrolase) (L-DEX) (Cryptic L-isomer-specific dehalogenase) (DhlS5I),InterPro: Haloacid dehalogenase-like hydrolase; Conserved hypothetical protein YP_002635182.1 similar to immunoglobulin G binding protein A precursor,(Q21313) Laminin-like protein K08C7.3 precursor,InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein YP_002635183.1 similar to dehydrogenase/reductase,(P87219) Sorbitol utilization protein SOU1,InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002635184.1 (O52717) Ribitol transporter,InterPro: General substrate transporter,Major facilitator superfamily; Hypothetical protein YP_002635185.1 (P44401) Xylulose kinase (EC 2.7.1.17) (Xylulokinase),InterPro: Carbohydrate kinase FGGY; Conserved hypothetical protein YP_002635186.1 (P37624) Hypothetical ABC transporter ATP-binding protein yhiH; Hypothetical protein YP_002635187.1 (P75776) Hypothetical ABC transporter ATP-binding protein ybhF; Conserved hypothetical protein YP_002635188.1 N terminal similar to rrf2 family protein, putative transcriptional regulator,(Q9R9M8) AAU3 protein precursor,InterPro: Protein of unknown function UPF0074; Hypothetical protein YP_002635189.1 (O28938) Hypothetical protein AF1331; Hypothetical protein YP_002635190.1 (P37062) NADH peroxidase (EC 1.11.1.1) (NPXase) (Npx),InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Conserved hypothetical protein YP_002635191.1 similar to CsbB stress response protein,(P57022) Bactoprenol glucosyl transferase (EC 2.4.1.-),InterPro: Glycosyl transferase family 2; Hypothetical protein YP_002635192.1 (P23240) Aldehyde dehydrogenase (EC 1.2.1.3),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein YP_002635193.1 (P37685) Aldehyde dehydrogenase B (EC 1.2.1.22) (Lactaldehyde dehydrogenase),InterPro: Aldehyde dehydrogenase; Hypothetical protein YP_002635194.1 (P77728) 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR),InterPro: Ketopantoate reductase ApbA/PanE; Conserved hypothetical protein YP_002635195.1 (Q9UHI5) Large neutral amino acids transporter small subunit 2 (L-type amino acid transporter 2) (hLAT2),InterPro: Amino acid permease-associated region; Conserved hypothetical protein YP_002635196.1 (P26388) Putative colanic acid biosynthesis glycosyl transferase wcaL (EC 2.-.-.-); Hypothetical protein YP_002635197.1 (P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein YP_002635198.1 (P27623) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D),InterPro: Cytidylyltransferase; Conserved hypothetical protein YP_002635199.1 (P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein YP_002635200.1 (P13484) Probable poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) (Major teichoic acid biosynthesis protein E),InterPro: Glycosyl transferase group 1; Conserved hypothetical protein YP_002635201.1 (P37349) Protein ycgC,InterPro: PTS system fructose subfamily IIA component; Hypothetical protein YP_002635202.1 (P43550) Dihydroxyacetone kinase 2 (EC 2.7.1.29) (Glycerone kinase 2) (DHA kinase 2),InterPro: Dak phosphatase domain; Hypothetical protein YP_002635203.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase YP_002635204.1 Hypothetical protein YP_002635205.1 (P16680) PhnA protein,InterPro: PhnA protein; Hypothetical protein YP_002635206.1 (P51798) Chloride channel protein 7 (ClC-7); Conserved hypothetical protein YP_002635207.1 (O52618) Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I),InterPro: ABC transporter; Conserved hypothetical protein YP_002635208.1 Hypothetical protein YP_002635209.1 Hypothetical protein YP_002635210.1 Similar to cycA, D-serine/D-alanine/glycine transporter (Pseudomonas putida),(P96704) Hypothetical transport protein ydgF,InterPro: Amino acid permease-associated region; Hypothetical protein YP_002635211.1 catalyzes the formation of pyruvate from lactate YP_002635212.1 (P23302) Integration host factor alpha-subunit (IHF-alpha); Hypothetical protein YP_002635213.1 (O05227) Na(+)/H(+) antiporter subunit G (Multiple resistance and pH homeostasis protein G) (Mrp complex subunit G),InterPro: Na+/H+ antiporter subunit; Hypothetical protein YP_002635214.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002635215.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport YP_002635216.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport YP_002635217.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002635218.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002635219.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali YP_002635220.1 (Q9JV76) Tyrosine recombinase xerD,InterPro: Phage integrase; Hypothetical protein YP_002635221.1 local similarity to (P75247) ClpB protein; Hypothetical protein YP_002635222.1 slightly similar to:,(O43053) Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-13-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase); Hypothetical protein YP_002635223.1 Hypothetical protein YP_002635224.1 Hypothetical protein YP_002635225.1 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate YP_002635226.1 putative hydrolase,(Q8R164) Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase) (Biphenyl hydrolase-like protein),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002635227.1 (Q45581) Putative HTH-type transcriptional regulator ybbH,InterPro: Sugar isomerase (SIS); Hypothetical protein YP_002635228.1 (Q9KVD9) PTS system sucrose-specific IIBC component (EIIBC-Scr) (Sucrose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Scr),InterPro: Phosphotransferase system EIIC; Conserved hypothetical protein YP_002635229.1 (Q8ZCP8) Hypothetical protein YPO2925/Y1305/YP2532,InterPro: Glucokinase regulatory-like protein; Hypothetical protein YP_002635230.1 InterPro: Bacterial protein of unknown function DUF871; Hypothetical protein YP_002635231.1 Hypothetical protein YP_002635232.1 (Q50228) Formamidase (EC 3.5.1.49) (Formamide amidohydrolase),InterPro: Acetamidase/Formamidase; Hypothetical protein YP_002635233.1 (P32157) Hypothetical protein yiiM,InterPro: MOSC domain; Hypothetical protein YP_002635234.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis YP_002635235.1 similar to low temperature requirement A protein; Hypothetical protein YP_002635236.1 (Q9YDD5) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine monophosphate kinase) (CMP kinase); Hypothetical protein YP_002635237.1 (P24125) 51.5 kDa protein,InterPro: DEAD/DEAH box helicase; Hypothetical protein YP_002635238.1 (P08337) Mutator mutT protein (78-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (EC 3.6.1.-) (dGTP pyrophosphohydrolase),InterPro: NUDIX hydrolase; Hypothetical protein YP_002635239.1 (O66043) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase) (CL synthase); Hypothetical protein YP_002635240.1 similar to S. epidermidis teichoic acid biosynthesis protein F [Staphylococcus epidermidis ATCC 12228],Blastscore: Expect = 0.0 Identities = 479/720 (66%), Positives = 597/720 (82%),(P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein YP_002635241.1 (O06079) Putative membrane protein mmpL11,InterPro: Sterol-sensing 5TM box; Hypothetical protein YP_002635242.1 (P46330) Putative HTH-type transcriptional regulator yxbF; Hypothetical protein YP_002635243.1 local similarity to:,(Q8PDD7) Phosphoglycerol transferase I (EC 2.7.8.20) (Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase),InterPro: Sulfatase; Hypothetical protein YP_002635244.1 (P37781) Putative O-antigen transporter,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein YP_002635245.1 Hypothetical protein YP_002635246.1 similar to Amylovoran biosynthesis AmsK [Bacillus cereus ATCC 14579] gi|29898862|gb|AAP12133.1|,local similarity to:,(O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2),InterPro: Glycosyl transferase group 1; Hypothetical protein YP_002635247.1 local similarity to:,(P26406) Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) (Galactosyl-P-P-undecaprenol synthetase),InterPro: Bacterial sugar transferase; Hypothetical protein YP_002635248.1 (Q58455) Hypothetical protein MJ1055,InterPro: NAD-dependent epimerase/dehydratase; Hypothetical protein YP_002635249.1 (Q8RG86) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase ammonia chain); Hypothetical protein YP_002635250.1 (Q58466) Hypothetical protein MJ1066,InterPro: DegT/DnrJ/EryC1/StrS aminotransferase; Hypothetical protein YP_002635251.1 (P39623) Spore coat polysaccharide biosynthesis protein spsC; Hypothetical protein YP_002635252.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine YP_002635253.1 (P71016) Betaine aldehyde dehydrogenase (EC 1.2.1.8) (BADH),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein YP_002635254.1 (P71015) Hypothetical protein yuaC (ORF2); Conserved hypothetical protein YP_002635255.1 (P76252) Probable transport protein yeaV,InterPro: BCCT transporter; Conserved hypothetical protein YP_002635256.1 (P23234) Indole-3-pyruvate decarboxylase (EC 4.1.1.74) (Indolepyruvate decarboxylase),InterPro: Pyruvate decarboxylase; Conserved hypothetical protein YP_002635257.1 (P62087) Putative HTH-type transcriptional regulator SA2060,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002635258.1 Hypothetical protein YP_002635259.1 (P54432) Hypothetical protein yrkE,InterPro: Rhodanese-like; Conserved hypothetical protein YP_002635260.1 (P76049) Hypothetical protein ycjY,InterPro: Esterase/lipase/thioesterase,COG1073: Hydrolases of the alpha/beta superfamily; Conserved hypothetical protein YP_002635261.1 weak similarity to transcriptional regulator tetR family; Hypothetical protein YP_002635262.1 Hypothetical protein YP_002635263.1 (Q01911) Tetracycline resistance protein from transposon Tn4351/Tn4400,InterPro: Flavoprotein monooxygenase; Hypothetical protein YP_002635264.1 (Q46872) Hypothetical protein yqjI,InterPro: Transcriptional regulator PadR-like family; Hypothetical protein YP_002635265.1 (P37829) Fructokinase (EC 2.7.1.4),InterPro: Carbohydrate kinase PfkB; Hypothetical protein YP_002635266.1 similar to transcriptional regulator tetR-family,(P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein YP_002635267.1 putative membrane protein,similar to phage infection protein precursor; Conserved hypothetical protein YP_002635268.1 (P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase,C-terminus similar to poly-alpha-glucosyltransferase; Hypothetical protein YP_002635269.1 (Q05852) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) (General stress protein 33) (GSP33),InterPro: Nucleotidyl transferase; Hypothetical protein YP_002635270.1 (Q05852) UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase) (General stress protein 33) (GSP33); Hypothetical protein YP_002635271.1 similar to teichoic acid biosynthesis protein F,(P13485) CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12) (Polyglycerol phosphate polymerase) (CGPTase) (Major teichoic acid biosynthesis protein F),InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein YP_002635272.1 similar to icaC,(Q9FF17) Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-13-glucosyltransferase (EC 2.4.1.-) (Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase),InterPro: Acyltransferase 3 family; Hypothetical protein YP_002635273.1 similar to aminoterminal part (aa 1-311) of COG1887: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Pediococcus pentosaceus ATCC 25745] ,InterPro: Glycosyl transferase family 2; Hypothetical protein YP_002635274.1 similar to carboxyterminal part (aa 334-1110) of COG1887: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Pediococcus pentosaceus ATCC 25745],InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Hypothetical protein YP_002635275.1 similar to icaC,InterPro: Acyltransferase 3 family; Conserved hypothetical protein YP_002635276.1 Hypothetical protein YP_002635277.1 (Q05587) Regulatory protein pocR,InterPro: Helix-turn-helix AraC type; Hypothetical protein YP_002635278.1 (P77538) Hypothetical protein yfhR,InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002635279.1 (Q8ZRN1) D-methionine-binding lipoprotein metQ precursor,InterPro: NLPA lipoprotein,similar to lactococcal lipoprotein; Conserved hypothetical protein YP_002635280.1 (Q9KTJ6) Probable D-methionine transport system permease protein metI,InterPro: Binding-protein-dependent transport systems inner membrane component; Conserved hypothetical protein YP_002635281.1 (Q8X7Z9) D-methionine transport ATP-binding protein metN,InterPro: ABC transporter; Conserved hypothetical protein YP_002635282.1 Note: Signal peptide predicted by SignalP 3.0: Most likely cleavage site between pos. 47 and 48: AEA-AE. Signal pepetide reveals SIRK-Motif (aa 20-23).,LPXTG-Motif: aa 4210-4214; Hypothetical protein YP_002635283.1 (P04395) DNA-3-methyladenine glycosylase II (EC 3.2.2.21) (3-methyladenine-DNA glycosylase II inducible) (TAG II) (DNA-3-methyladenine glycosidase II),InterPro: HhH-GPD; Hypothetical protein YP_002635284.1 (P60552) Guanylate kinase (EC 2.7.4.8) (GMP kinase); Conserved hypothetical protein YP_002635285.1 (O05083) Putative glycosyl transferase HI1698 (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein YP_002635286.1 (O89107) Deoxyribonuclease gamma precursor (EC 3.1.21.-) (DNase gamma) (Deoxyribonuclease I-like 3) (DNaseY); Hypothetical protein YP_002635287.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins YP_002635288.1 (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit); Hypothetical protein YP_002635289.1 (P78527) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1) (DNA-PKcs) (DNPK1) (p460); Hypothetical protein YP_002635290.1 (Q9ULL1) Pleckstrin homology domain containing family G member 1 (Fragment); Conserved hypothetical protein YP_002635291.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_002635292.1 Similar to C-terminal part (aa 1303-3607) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03635): 3608 aa,Note: LPXTG-Motif (aa 2238-2242); Hypothetical protein YP_002635293.1 Similar to internal part (aa 229-1302) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03635); Hypothetical protein YP_002635294.1 (P27470) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I) (Dextransucrase) (Sucrose 6-glucosyltransferase),Similar to N-terminal part (aa 1-227) of unnamed protein product [Staphylococcus haemolyticus JCSC1435] (BAE03635): 3608 aa; Hypothetical protein YP_002635295.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB YP_002635296.1 Hypothetical protein YP_002635297.1 (P42234) Catalase 2 (EC 1.11.1.6),InterPro: Catalase; Conserved hypothetical protein YP_002635298.1 (P42966) Hypothetical UPF0317 protein ycsI; Hypothetical protein YP_002635299.1 Hypothetical protein YP_002635300.1 similar to Sec-independent protein translocase protein tatC, Escherichia coli, 258AA, Expect = 2e-25,Identities = 75/228 (32%), Positives = 121/228 (53%),Gaps = 6/228 (2%),(O05523) Hypothetical protein ydiJ,InterPro: Sec-independent periplasmic protein translocase; High confidence in function and specificity YP_002635301.1 (P39595) Hypothetical protein ywbL precursor,putative membrane protein; Hypothetical protein YP_002635302.1 (P39597) Hypothetical protein ywbN precursor,InterPro: Tat-translocated enzyme; Hypothetical protein YP_002635303.1 (P75902) Protein ycdO,InterPro: Protein of unknown function DUF451,putative lipoprotein; Hypothetical protein YP_002635304.1 similar to multidrug resistance protein,(P54585) Hypothetical transport protein yhcA,InterPro: General substrate transporter; Hypothetical protein YP_002635305.1 (Q58746) Hypothetical protein MJ1351,InterPro: Ferredoxin-dependent glutamate synthase; Hypothetical protein YP_002635306.1 (P25145) Hypothetical oxidoreductase Lmo0432 (EC 1.-.-.-) (ORFA),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002635307.1 Hypothetical protein YP_002635308.1 Hypothetical protein YP_002635309.1 (P49687) Nucleoporin NUP145 (Nuclear pore protein NUP145); Hypothetical protein YP_002635310.1 (P50494) Duffy receptor gamma form precursor (Erythrocyte binding protein); Hypothetical protein YP_002635311.1 (O66557) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) (78-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase),InterPro: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; Hypothetical protein YP_002635312.1 (Q8CQD8) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin synthase) (DTB synthetase) (DTBS),InterPro: Cobyrinic acid ac-diamide synthase; Hypothetical protein YP_002635313.1 (P22819) Protein bioY,InterPro: BioY protein; Hypothetical protein YP_002635314.1 (Q8TDX5) 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC 4.1.1.45),InterPro: Amidohydrolase 2; Hypothetical protein YP_002635315.1 (P25052) Transcriptional activator tenA,InterPro: TENA/THI-4 protein; Hypothetical protein YP_002635316.1 (Q9CBY2) Trigger factor (TF),InterPro: Patatin; Hypothetical protein YP_002635317.1 (P30536) Peripheral-type benzodiazepine receptor (PBR) (PKBS) (Mitochondrial benzodiazepine receptor),InterPro: TspO/MBR-related protein; Hypothetical protein YP_002635318.1 Truncated ORF,Only local alignments to,(P50186) NaeI very-short-patch-repair endonuclease (EC 3.1.-.-) (V.NaeI),InterPro: DNA mismatch endonuclease vsr; Hypothetical protein YP_002635319.1 (Q9L9D7) Cocaine esterase (EC 3.1.1.-),InterPro: Peptidase S15; Hypothetical protein YP_002635320.1 (P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein YP_002635321.1 (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002635322.1 (Q59431) HTH-type transcriptional regulator uidR (Uid operon repressor) (Gus operon repressor),InterPro: Bacterial regulatory protein TetR HTH motif; Hypothetical protein YP_002635323.1 (O78472) Hypothetical 35.9 kDa protein ycf39; Hypothetical protein YP_002635324.1 (Q8K3Z0) Caspase recruitment domain protein 15 (Nod2 protein),InterPro: Abortive infection protein; Hypothetical protein YP_002635325.1 Similar to C-terminal part(aa 223-308) of putative glycine betaine/carnitine/choline-binding lipoprotein precursor [Staphylococcus aureus subsp. aureus MRSA252] (YP_041887): 313 aa,(O32243) Glycine betaine/carnitine/choline-binding protein precursor (Osmoprotectant-binding protein); Hypothetical protein YP_002635326.1 Similar to N-terminal part (aa 1-219) of putative glycine betaine/carnitine/choline-binding lipoprotein precursor [Staphylococcus aureus subsp. aureus MRSA252] (YP_041887): 313 aa,(O32243) Glycine betaine/carnitine/choline-binding protein precursor (Osmoprotectant-binding protein),InterPro: Substrate-binding region of ABC-type glycine betaine transport system; Hypothetical protein YP_002635327.1 similar to,(O52655) Bis(5-nucleosyl)-tetraphosphatase symmetrical (EC 3.6.1.41) (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 55-P1P4-tetraphosphate pyrophosphohydrolase),InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002635328.1 (Q57341) Putative ferric transport system permease protein fbpB,InterPro: Binding-protein-dependent transport systems inner membrane component; Hypothetical protein YP_002635329.1 (P43951) Protein HI0131 precursor,InterPro: Bacterial extracellular solute-binding protein family 1; Hypothetical protein YP_002635330.1 (Q8XZP8) Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase),InterPro: ABC transporter; Hypothetical protein YP_002635331.1 (P39647) Putative HTH-type transcriptional regulator ywfK,InterPro: LysR substrate binding domain; Hypothetical protein YP_002635332.1 (Q02821) Importin alpha subunit (Karyopherin alpha subunit) (Serine-rich RNA polymerase I suppressor protein); Hypothetical protein YP_002635333.1 Hypothetical protein YP_002635334.1 Hypothetical protein YP_002635335.1 Hypothetical protein YP_002635336.1 (Q8CMK8) Membrane protein oxaA 2 precursor,InterPro: 60 kDa inner membrane protein; Hypothetical protein YP_002635337.1 Hypothetical protein YP_002635338.1 Hypothetical protein YP_002635339.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_002635340.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP YP_002635341.1 (P44023) Hypothetical protein HI0594,InterPro: C4-dicarboxylate anaerobic carrier; Hypothetical protein YP_002635342.1 similar to general stress protein,(P80238) General stress protein 26 (GSP26); Hypothetical protein YP_002635343.1 (P44023) Hypothetical protein HI0594,InterPro: C4-dicarboxylate anaerobic carrier,similar to putative membrane arginine transporter; Hypothetical protein YP_002635344.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP YP_002635345.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_002635346.1 Hypothetical protein YP_002635347.1 (P39062) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme) (Acetyl-CoA synthase),InterPro: AMP-dependent synthetase and ligase; Hypothetical protein YP_002635348.1 Similar to osmoregulated proline transporter opuE,Bacillus subtilis,,492AA, Expect = 1e-141, Identities = 272/478 (56%), Positives = 366/478 (76%), Gaps = 14/478 (2%),and to Sodium/proline symporter putP, Escherichia coli,502AA,,Expect = 1e-108, Identities = 224/481 (46%),Positives = 324/481 (67%), Gaps = 17/481 (3%), (O06493) Osmoregulated proline transporter (Sodium/proline symporter),InterPro: Na+/solute symporter; Hypothetical protein YP_002635349.1 (P57140) Hypothetical protein BU028/BU029; Hypothetical protein YP_002635350.1 Hypothetical protein YP_002635351.1 (P37112) N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) (L-aminoacylase),InterPro: Peptidase M20/M25/M40,Similar to C-terminal part (aa 77-383) of N-acyl-L-amino acid amidohydrolase [Deinococcus radiodurans R1] (AAF11266): 388 aa; Hypothetical protein YP_002635352.1 (P54955) Hypothetical protein yxeP,Similar to N-terminal part (aa 10-69) of N-acyl-L-amino acid amidohydrolase [Deinococcus radiodurans R1] (AAF11266): 388 aa; Hypothetical protein YP_002635353.1 (P46133) Aminobenzoyl-glutamate transport protein,InterPro: AbgT putative transporter family; Conserved hypothetical protein YP_002635354.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_002635355.1 (Q9CE03) Hypothetical UPF0177 protein yvdC,InterPro: Abortive infection protein; Hypothetical protein YP_002635356.1 (O05730) Probable short-chain type dehydrogenase/reductase vdlC (EC 1.-.-.-),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002635357.1 similar to transcriptional regulator,similar to (Q56069) Multiple antibiotic resistance protein marR,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002635358.1 similar to (Q56069) Multiple antibiotic resistance protein marR,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002635359.1 similar to parts of (P32399) Hypothetical protein yhgE (ORFB); Hypothetical protein YP_002635360.1 (Q9Z9P2) Glycerate kinase (EC 2.7.1.31),InterPro: Conserved hypothetical protein 45; Conserved hypothetical protein YP_002635361.1 similar to general stress protein,(P80238) General stress protein 26 (GSP26); Hypothetical protein YP_002635362.1 (P37271) Phytoene synthase chloroplast precursor (EC 2.5.1.-),InterPro: Squalene/phytoene synthase; Conserved hypothetical protein YP_002635363.1 similar to putative transporter,(P55908) Hypothetical protein ycgA,InterPro: C4-dicarboxylate anaerobic carrier; Hypothetical protein YP_002635364.1 Hypothetical protein YP_002635365.1 similar to putative permease; Hypothetical protein YP_002635366.1 Hypothetical protein YP_002635367.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_002635368.1 (P54950) Putative monooxygenase yxeK; Hypothetical protein YP_002635369.1 (O66932) Glycogen phosphorylase (EC 2.4.1.1); Hypothetical protein YP_002635370.1 Hypothetical protein YP_002635371.1 (Q02510) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),InterPro: Surface protein from Gram-positive cocci anchor region,truncated putative clumping factor B; Hypothetical protein YP_002635372.1 parts of the gene are similar to ,(Q92H60) Probable UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme),and:,InterPro: Cytoplasmic peptidoglycan synthetases N-terminal; Hypothetical protein YP_002635373.1 Hypothetical protein YP_002635374.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; a fusion protein of this enzyme with MsrB provides protection against oxidative stress in Neisseria gonorrhoeae YP_002635375.1 (Q9X248) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002635376.1 Hypothetical protein YP_002635377.1 (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-),InterPro: Aldo/keto reductase; Hypothetical protein YP_002635378.1 truncated putative endonuclease/exonuclease/phosphatase; Hypothetical protein YP_002635379.1 truncated putative extracellular nuclease; Hypothetical protein YP_002635380.1 Hypothetical protein YP_002635381.1 similar to putative transport proteins / permeases; Hypothetical protein YP_002635382.1 Hypothetical protein YP_002635383.1 Hypothetical protein YP_002635384.1 Hypothetical protein YP_002635385.1 Hypothetical protein YP_002635386.1 (Q9WXE6) Chlorohydroquinone/hydroquinone 12-dioxygenase (EC 1.13.11.-) (Hydroquinone meta-cleavage dioxygenase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Conserved hypothetical protein YP_002635387.1 Hypothetical protein YP_002635388.1 InterPro: Excinuclease ABC C subunit N-terminal; Hypothetical protein YP_002635389.1 Hypothetical protein YP_002635390.1 similar to Tellurite resistance protein; Hypothetical protein YP_002635391.1 Hypothetical protein YP_002635392.1 Hypothetical protein YP_002635393.1 Hypothetical protein YP_002635394.1 Hypothetical protein YP_002635395.1 (Q89A21) ATP-dependent DNA helicase rep (EC 3.6.1.-); Hypothetical protein YP_002635396.1 Hypothetical protein YP_002635397.1 (P15078) Carbon starvation protein A,InterPro: Carbon starvation protein CstA; Conserved hypothetical protein YP_002635398.1 (P54417) Glycine betaine transporter, opuD like protein,InterPro: BCCT transporter; Conserved hypothetical protein YP_002635399.1 Hypothetical protein YP_002635400.1 truncated (Q53585) Enterotoxin type H precursor (SEH); Hypothetical protein YP_002635401.1 (Q9F1W4) Heat-inducible transcription repressor hrcA; Hypothetical protein YP_002635402.1 (P47082) Hypothetical 65.3 kDa protein in PRE3-MPP10 intergenic region; Hypothetical protein YP_002635403.1 (P40983) Hypothetical protein in xynA 3region (ORF6) (Fragment); Hypothetical protein YP_002635404.1 (Q58111) Hypothetical UPF0003 protein MJ0700,InterPro: Mechanosensitive (MS) ion channel; Hypothetical protein YP_002635405.1 Converts D-sorbitol-dphosphate to D-fructose-6-phosphate YP_002635406.1 (P46321) Probable licABCH operon regulator,InterPro: Transcriptional antiterminator bglG; Hypothetical protein YP_002635407.1 (P15081) Glucitol operon activator protein; Hypothetical protein YP_002635408.1 (P56579) PTS system glucitol/sorbitol-specific IIC2 component (EIIC2-Gut) (Glucitol/sorbitol-permease IIC2 component) (Phosphotransferase enzyme II C2 component),InterPro: PTS system enzyme II sorbitol-specific factor; Hypothetical protein YP_002635409.1 (O32333) PTS system glucitol/sorbitol-specific IIBC component (EIIBC-Gut) (Glucitol/sorbitol-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Gut),InterPro: Sorbitol phosphotransferase enzyme II; Hypothetical protein YP_002635410.1 (P59784) PTS system glucitol/sorbitol-specific IIA component (EIIA-Gut) (Glucitol/sorbitol-permease IIA component) (Phosphotransferase enzyme II A component) (EC 2.7.1.69) (EIII-Gut),InterPro: PTS system glucitol/sorbitol-specific IIA component; Hypothetical protein YP_002635411.1 (P53552) RLR1 protein (THO2 protein); Hypothetical protein YP_002635412.1 (P15005) 5-methylcytosine-specific restriction enzyme B (EC 3.1.21.-) (EcoKMcrBC); Hypothetical protein YP_002635413.1 (P13520) Overcoming lysogenization defect protein; Hypothetical protein YP_002635414.1 (O74475) 13-beta-glucan synthase component bgs4 (EC 2.4.1.34) (13-beta-D-glucan-UDP glucosyltransferase); Hypothetical protein YP_002635415.1 (P46017) FraH protein; Hypothetical protein YP_002635416.1 (Q9UUL4) Cell wall alpha-13-glucan synthase mok12 (EC 2.4.1.183); Hypothetical protein YP_002635417.1 Hypothetical protein YP_002635418.1 (Q58721) Putative HTH-type transcriptional regulator MJ1325,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein YP_002635419.1 (P32382) NADH oxidase (EC 1.-.-.-),InterPro: NADH:flavin oxidoreductase/NADH oxidase; Hypothetical protein YP_002635420.1 (Q99390) Hypothetical 31.7 kDa protein in traX-finO intergenic region (ORFC),InterPro: Esterase/lipase/thioesterase; Hypothetical protein YP_002635421.1 (Q9CLT9) Acetylornithine deacetylase (EC 3.5.1.16) (Acetylornithinase) (AO) (N-acetylornithinase) (NAO),InterPro: Peptidase M20/M25/M40; Hypothetical protein YP_002635422.1 no Shine-Dalgarno sequence,(Q9TM05) ATP-dependent Clp protease ATP-binding subunit clpA; Hypothetical protein YP_002635423.1 (P79896) Alcohol dehydrogenase class III (EC 1.1.1.1) (Glutathione-dependent formaldehyde dehydrogenase) (EC 1.2.1.1) (FDH) (FALDH),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Conserved hypothetical protein YP_002635424.1 (Q9ZN99) Catalase (EC 1.11.1.6),InterPro: Catalase; Conserved hypothetical protein YP_002635425.1 (Q88KJ1) Trigger factor (TF); Hypothetical protein YP_002635426.1 (P37513) Hypothetical protein yyaK,InterPro: Abortive infection protein; Hypothetical protein YP_002635427.1 no Shine-Dalgarno sequence,(P46490) Hypothetical protein HI0198,InterPro: Protein of unknown function DUF81; Hypothetical protein YP_002635428.1 (Q58111) Hypothetical UPF0003 protein MJ0700,InterPro: Mechanosensitive (MS) ion channel; Hypothetical protein YP_002635429.1 truncated (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase); Hypothetical protein YP_002635430.1 (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase),InterPro: Glycoside hydrolase family 3 N-terminal; Hypothetical protein YP_002635431.1 Hypothetical protein YP_002635432.1 (Q57491) Hypothetical sugar transferase HI0872 (EC 2.-.-.-),InterPro: Bacterial sugar transferase; Conserved hypothetical protein YP_002635433.1 Hypothetical protein YP_002635434.1 similar to Capsular polysaccharide biosynthesis glycosyl transferase capM ,(P39862) Capsular polysaccharide biosynthesis glycosyl transferase capM (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein YP_002635435.1 (O51317) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-) (Glu-ADT subunit A); Hypothetical protein YP_002635436.1 (P39861) CapL protein,InterPro: UDP-glucose/GDP-mannose dehydrogenase; Conserved hypothetical protein YP_002635437.1 (P39858) CapI protein,InterPro: NAD-dependent epimerase/dehydratase; Hypothetical protein YP_002635438.1 (Q9R9N0) Lipopolysaccharide core biosynthesis glycosyl transferase lpsD (EC 2.-.-.-),InterPro: Glycosyl transferase group 1; Hypothetical protein YP_002635439.1 (P37781) Putative O-antigen transporter,InterPro: Polysaccharide biosynthesis protein; Hypothetical protein YP_002635440.1 Hypothetical protein YP_002635441.1 (P39853) Capsular polysaccharide biosynthesis protein capD,InterPro: Polysaccharide biosynthesis protein CapD,Similar to C-terminal part (aa 127-599) of capsular polysaccharide biosynthesis protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300153): 611 aa; Conserved hypothetical protein YP_002635442.1 (P39853) Capsular polysaccharide biosynthesis protein capD,Similar to N-terminus (aa 1-125) of capsular polysaccharide biosynthesis protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] (YP_300153): 611 aa; Hypothetical protein YP_002635443.1 (P96717) Putative protein-tyrosine phosphatase ywqE (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Conserved hypothetical protein YP_002635444.1 (P39851) Putative tyrosine-protein kinase capB (EC 2.7.1.112),InterPro: Exopolysaccharide synthesis protein; Conserved hypothetical protein YP_002635445.1 (P71050) Hypothetical protein yveK,InterPro: Lipopolysaccharide biosynthesis; Conserved hypothetical protein YP_002635446.1 (Q58677) Hypothetical protein MJ1281; Hypothetical protein YP_002635447.1 (P46330) Putative HTH-type transcriptional regulator yxbF,InterPro: Bacterial regulatory protein TetR HTH motif; Conserved hypothetical protein YP_002635448.1 (P42243) Hypothetical transport protein ycbK,InterPro: Protein of unknown function DUF6; Hypothetical protein YP_002635449.1 (P42308) Citrate transporter,InterPro: Citrate transporter; Conserved hypothetical protein YP_002635450.1 similar to succinyl-diaminopimelate desuccinylase (Q931I4),Probable succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) (SDAP),InterPro: Peptidase M20/M25/M40; Hypothetical protein YP_002635451.1 (P24549) Aldehyde dehydrogenase 1A1 (EC 1.2.1.3) (Aldehyde dehydrogenase cytosolic) (ALDH class 1) (ALHDII) (ALDH-E1),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein YP_002635452.1 (P36205) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia ligase) (GS),InterPro: Glutamine synthetase catalytic domain; Conserved hypothetical protein YP_002635453.1 (Q9X248) 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) (3-ketoacyl-acyl carrier protein reductase),InterPro: Short-chain dehydrogenase/reductase SDR; Hypothetical protein YP_002635454.1 similar to ethanolamine utilization protein EutH -Escherichia coli,(P41796) Ethanolamine utilization protein eutH (Putative ethanolamine transporter),InterPro: Ethanolamine utilisation protein EutH; Hypothetical protein YP_002635455.1 (O29221) Chemotaxis response regulator protein-glutamate methylesterase (EC 3.1.1.61),InterPro: Response regulator antiterminator; Hypothetical protein YP_002635456.1 similar to two-component sensor histidine kinase,(P27896) Nitrate/nitrite sensor protein narQ (EC 2.7.3.-),InterPro: ATP-binding region ATPase-like; Hypothetical protein YP_002635457.1 (Q9EYI7) Probable acetoacetate decarboxylase (EC 4.1.1.4) (ADC) (AAD); Conserved hypothetical protein YP_002635458.1 similar to 2-dehydropantoate 2-reductase ,(Q9A0B3) Putative 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) (KPA reductase) (KPR),InterPro: Ketopantoate reductase ApbA/PanE; Hypothetical protein YP_002635459.1 similar to transcriptional regulator, LysR family,(O78432) Putative HTH-type transcriptional regulator ycf30,InterPro: Bacterial regulatory protein LysR HTH motif; Hypothetical protein YP_002635460.1 (P25405) Alcohol dehydrogenase I-A (EC 1.1.1.1) (ADH IA),InterPro: Zinc-containing alcohol dehydrogenase superfamily; Conserved hypothetical protein YP_002635461.1 (Q9QXK7) Cleavage and polyadenylation specificity factor 73 kDa subunit (CPSF 73 kDa subunit),InterPro: Beta-lactamase-like; Hypothetical protein YP_002635462.1 (P24549) Aldehyde dehydrogenase 1A1 (EC 1.2.1.3) (Aldehyde dehydrogenase cytosolic) (ALDH class 1) (ALHDII) (ALDH-E1),InterPro: Aldehyde dehydrogenase; Conserved hypothetical protein YP_002635463.1 (P70976) Hypothetical protein ybaJ; Hypothetical protein YP_002635464.1 Hypothetical protein YP_002635465.1 (P10548) Lysostaphin precursor (EC 3.4.24.75) (Glycyl-glycine endopeptidase),InterPro: Peptidase M23/M37,Note: this sequence is about 80 aa longer than similar sequences from other staphylococci.; Hypothetical protein YP_002635466.1 (P36650) Icc protein,InterPro: Metallo-phosphoesterase; Hypothetical protein YP_002635467.1 Hypothetical protein YP_002635468.1 (P96707) Putative NAD(P)H nitroreductase ydgI (EC 1.-.-.-),InterPro: Nitroreductase family; Conserved hypothetical protein YP_002635469.1 (P44558) Putative HTH-type transcriptional regulator HI0186,InterPro: Bacterial regulatory protein MerR family; Hypothetical protein YP_002635470.1 Hypothetical protein YP_002635471.1 (P20187) Hypothetical 37.1 kDa protein in transposon TN4556,InterPro: SAM (and some other nucleotide) binding motif; Hypothetical protein YP_002635472.1 (Q10875) Hypothetical transport protein Rv1979c/MT2031,InterPro: Amino acid permease-associated region; Hypothetical protein YP_002635473.1 (Q9ZDC7) Hypothetical protein RP404,InterPro: Glutamine amidotransferase class-I; Hypothetical protein YP_002635474.1 Similar to C-terminal part (aa 347-454) of amino acid permease [Lactobacillus reuteri JCM 1112] (ZP_01164202): 464 aa; Hypothetical protein YP_002635475.1 Similar to N-terminal part (aa 5-354) of amino acid permease [Lactobacillus reuteri JCM 1112] (ZP_01164202): 464 aa; Hypothetical protein YP_002635476.1 (O70247) Sodium-dependent multivitamin transporter (Na(+)-dependent multivitamin transporter),InterPro: Na+/solute symporter; Conserved hypothetical protein YP_002635477.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid YP_002635478.1 similar to glucokinase,(P26832) Hypothetical protein CPE0188,InterPro: ROK family; Conserved hypothetical protein YP_002635479.1 (P44540) Putative HTH-type transcriptional regulator HI0143,InterPro: Sugar isomerase (SIS); Conserved hypothetical protein YP_002635480.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate YP_002635481.1 (Q99W40) Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (Glucosamine-6-phosphate isomerase) (GNPDA) (GlcN6P deaminase),InterPro: Glucosamine-6-phosphate isomerase; Conserved hypothetical protein YP_002635482.1 Hypothetical protein YP_002635483.1 similar to divalent cation transport ,(P40948) Hypothetical protein yqxL,InterPro: Mg2+ transporter protein CorA-like; Hypothetical protein YP_002635484.1 (P10335) Lipase precursor (EC 3.1.1.3) (Glycerol ester hydrolase),InterPro: Esterase/lipase/thioesterase; High confidence in function and specificity YP_002635485.1 (Q04902) Hypothetical 26.0 kDa protein in FET4-ERR1 intergenic region,InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein YP_002635486.1 Hypothetical protein YP_002635487.1 (P60077) Hypothetical UPF0291 protein SA2360; Hypothetical protein YP_002635488.1 (Q98DM0) 23-bisphosphoglycerate-dependent phosphoglycerate mutase (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM),InterPro: Phosphoglycerate/bisphosphoglycerate mutase; Hypothetical protein YP_002635489.1 (O05406) Hypothetical protein yrhP,InterPro: Lysine exporter protein (LYSE/YGGA); Hypothetical protein YP_002635490.1 (O26543) UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A),InterPro: AAA ATPase; Hypothetical protein YP_002635491.1 (P46918) Minor teichoic acid biosynthesis protein ggaB,InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Conserved hypothetical protein YP_002635492.1 (P46918) Minor teichoic acid biosynthesis protein ggaB,InterPro: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; Conserved hypothetical protein YP_002635493.1 Hypothetical protein YP_002635494.1 Conserved hypothetical protein YP_002635495.1 (P94547) Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (Long-chain acyl-CoA synthetase),InterPro: AMP-dependent synthetase and ligase; Conserved hypothetical protein YP_002635496.1 (Q20772) Probable glutaryl-CoA dehydrogenase mitochondrial precursor (EC 1.3.99.7) (GCD),InterPro: Acyl-CoA dehydrogenase C-terminal; Conserved hypothetical protein YP_002635497.1 (P40939) Trifunctional enzyme alpha subunit mitochondrial precursor (TP-alpha) (78 kDa gastrin-binding protein) [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)],InterPro: 3-hydroxyacyl-CoA dehydrogenase NAD binding domain; Conserved hypothetical protein YP_002635498.1 (P09110) 3-ketoacyl-CoA thiolase peroxisomal precursor (EC 2.3.1.16) (Beta-ketothiolase) (Acetyl-CoA acyltransferase) (Peroxisomal 3-oxoacyl-CoA thiolase),InterPro: Thiolase; Conserved hypothetical protein YP_002635499.1 (P52080) Hypothetical UPF0039 protein SAV1054/SA0906/MW0937 (ORF3),InterPro: GCN5-related N-acetyltransferase; Hypothetical protein YP_002635500.1 similar to GlpX type II fructose-1,6-bisphosphatase YP_002635501.1 similar to ribose 5-phosphate isomerase B ,(Q8CRJ3) Galactose-6-phosphate isomerase lacB subunit (EC 5.3.1.26),InterPro: Ribose/galactose isomerase; Hypothetical protein YP_002635502.1 similar to dihydroxyacetone kinase ,similar to glycerone kinase EC 2.7.1.29,(P76014) Protein ycgS,InterPro: Dak phosphatase domain; Hypothetical protein YP_002635503.1 (P76015) Hypothetical protein ycgT,InterPro: Dak kinase domain; Hypothetical protein YP_002635504.1 (O05390) Alpha-ketoglutarate permease,InterPro: General substrate transporter; High confidence in function and specificity YP_002635505.1 Hypothetical protein YP_002635506.1 (P77721) Putative HTH-type transcriptional regulator ydjF,InterPro: Bacterial regulatory protein DeoR family; Hypothetical protein YP_002635507.1 (P44331) Ribokinase (EC 2.7.1.15),InterPro: Carbohydrate kinase PfkB; High confidence in function and specificity YP_002635508.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source YP_002635509.1 (P60946) Putative ribose uptake protein rbsU; Conserved hypothetical protein YP_002635510.1 local similarity to (Q9CPA2) Ribose operon repressor; Hypothetical protein YP_002635511.1 (P37947) HTH-type transcriptional regulator degA (Degradation activator),InterPro: Bacterial regulatory protein LacI HTH motif; Conserved hypothetical protein YP_002635512.1 (O04885) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase),InterPro: Glyoxalase/Bleomycin resistance protein/dioxygenase domain; Hypothetical protein YP_002635513.1 (P39315) Hypothetical protein ytfG; Hypothetical protein YP_002635514.1 similar to immunodominant antigen B, Staphylococcus aureus, 170AA, Expect = 6e-12, Identities = 48/170 (28%),Positives = 78/170 (45%), Gaps = 11/170 (6%),(Q92E82) ATP phosphoribosyltransferase regulatory subunit; Hypothetical protein YP_002635515.1 no Shine Dalgarno sequence,Only local similarity to:,(P46324) Hypothetical protein yvrN,InterPro: Protein of unknown function DUF214; Hypothetical protein YP_002635516.1 only local similarity to:,(P37503) Putative HTH-type transcriptional regulator yybA,InterPro: Bacterial regulatory protein MarR family; Hypothetical protein YP_002635517.1 (P49022) Phage infection protein; Hypothetical protein YP_002635518.1 similar to autolysin precursor (Staphylococcus epidermidis),(P39046) Muramidase-2 precursor (EC 3.2.1.17) (14-beta-N-acetylmuramoylhydrolase) (Peptidoglycan hydrolase) (Pg-hydrolase-2) (Lysosyme),InterPro: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Conserved hypothetical protein YP_002635519.1 (P02469) Laminin beta-1 chain precursor (Laminin B1 chain),InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein YP_002635520.1 (Q9RA96) Transcriptional regulator slyA (Regulator of antibiotic and pigment protein),InterPro: Bacterial regulatory protein MarR family; Conserved hypothetical protein YP_002635521.1 (Q58119) Hypothetical protein MJ0709,InterPro: Multi antimicrobial extrusion protein MatE; Hypothetical protein YP_002635522.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_002635523.1 (Q09675) Hypothetical protein C5H10.02c in chromosome I,InterPro: Protein of unknown function ThiJ/PfpI; Hypothetical protein YP_002635524.1 no Shine Dalgarno sequence,(P55584) Hypothetical 38.7 kDa protein y4NL; Hypothetical protein YP_002635525.1 no Shine Dalgarno sequence,(Q58721) Putative HTH-type transcriptional regulator MJ1325,InterPro: Bacterial regulatory protein ArsR family; Hypothetical protein YP_002635526.1 (P77775) Hypothetical UPF0105 protein yfcH; Hypothetical protein YP_002635527.1 (P39841) Mannose-6-phosphate isomerase (EC 5.3.1.8) (Phosphomannose isomerase) (PMI) (Phosphohexomutase),InterPro: Mannose-6-phosphate isomerase type I; Family membership YP_002635528.1 (P23355) PTS system fructose-specific IIBC component (EIIBC-Fru) (Fructose-permease IIBC component) (Phosphotransferase enzyme II BC component) (EC 2.7.1.69) (EII-Fru),InterPro: PTS fructose IIC component; Conserved hypothetical protein YP_002635529.1 (P46321) Probable licABCH operon regulator,InterPro: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; Conserved hypothetical protein YP_002635530.1 Conserved hypothetical protein YP_002635531.1 similar to,(P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Conserved hypothetical protein YP_002635532.1 Hypothetical protein YP_002635533.1 (Q05523) D-alanyl-D-alanine carboxypeptidase precursor (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase) (CPase) (PBP5),InterPro: Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Hypothetical protein YP_002635534.1 similar to,(P71362) L-24-diaminobutyrate decarboxylase (EC 4.1.1.-) (DABA decarboxylase) (DABA-DC),InterPro: Pyridoxal-dependent decarboxylase; Hypothetical protein YP_002635535.1 similar to,(P45743) Isochorismatase (EC 3.3.2.1) (23 dihydro-23 dihydroxybenzoate synthase) (Superoxide-inducible protein 1) (SOI1),InterPro: Isochorismatase hydrolase family; Hypothetical protein YP_002635536.1 similar to (P54585) Hypothetical transport protein yhcA,InterPro: Major facilitator superfamily; Hypothetical protein YP_002635537.1 similar to (O35018) Lincomycin resistance protein lmrB,InterPro: Major facilitator superfamily; Conserved hypothetical protein YP_002635538.1 Hypothetical protein YP_002635539.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_002635540.1 (P56185) Hypothetical UPF0036 protein HP1430,InterPro: Beta-lactamase-like; Conserved hypothetical protein YP_002635541.1 similar to Yycl protein B. subtilis; Hypothetical protein YP_002635542.1 Hypothetical protein YP_002635543.1 (Q45614) Sensor protein yycG (EC 2.7.3.-),InterPro: Histidine kinase; Family membership YP_002635544.1 (P37478) Transcriptional regulatory protein yycF,InterPro: Response regulator receiver; Hypothetical protein YP_002635545.1 no Shine Dalgarno sequence; Hypothetical protein YP_002635546.1 (P54478) Hypothetical protein yqfU,InterPro: Protein of unknown function DUF161; Hypothetical protein YP_002635547.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_002635548.1 (P37469) Replicative DNA helicase (EC 3.6.1.-),InterPro: DnaB helicase; High confidence in function and specificity YP_002635549.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002635550.1 (P37484) Hypothetical protein yybT,InterPro: GGDEF; Hypothetical protein YP_002635551.1 Hypothetical protein YP_002635552.1 Hypothetical protein YP_002635553.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002635554.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_002635555.1 (P53405) Insulin gene enhancer protein ISL-1 (Islet-1),InterPro: Surface protein from Gram-positive cocci anchor region; Hypothetical protein YP_002635556.1 (P96051) Hypothetical UPF0031 protein in folD-pbp2B intergenic region (ORF1091),InterPro: Protein of unknown function UPF0031; Conserved hypothetical protein YP_002635557.1 High confidence in function and specificity YP_002635558.1 High confidence in function and specificity YP_002635559.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA YP_002635560.1 (P05650) Hypothetical protein yaaA,InterPro: RNA-binding S4; Hypothetical protein YP_002635561.1 binds the polymerase to DNA and acts as a sliding clamp YP_002635562.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.