-- dump date   	20140620_080941
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_013515.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSMPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, PhrapPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMPPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in FrancePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: FrancePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiensPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite feverPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: FacultativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: NonmotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: NonsporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bitePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          feverPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: HostPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: Host Phenotypes            :: PathogenPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: Host Phenotypes            :: Pathogen ##Metadata-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001779. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: Host Phenotypes            :: Pathogen ##Metadata-END## COMPLETENESS: full length.
NC_013516.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSMPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, PhrapPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMPPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in FrancePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: FrancePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiensPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite feverPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: FacultativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: NonmotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: NonsporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bitePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          feverPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: HostPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: Host Phenotypes            :: PathogenPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: Host Phenotypes            :: Pathogen ##Metadata-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001780. URL -- http://www.jgi.doe.gov JGI Project ID: 4083288 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Streptobacillus moniliformis 9901, DSM                          12112 Culture Collection ID :: DSM 12112, ATCC 14647 GOLD Stamp ID         :: Gi02312 Funding Program       :: DOE-GEBA 2007 Number of Reads       :: 22979 Sanger, 326576 pyrosequence Assembly Method       :: Newbler version 1.1.02.15, Phrap Sequencing Depth      :: 11.5x Sanger; 24.9x pyrosequence Gene Calling Method   :: Prodigal 1.4, GenePRIMP Isolation Site        :: Patient with rat-bite fever in France Isolation Country     :: France Host Name             :: Homo sapiens Host Health           :: Patient with rat-bite fever Oxygen Requirement    :: Facultative Cell Shape            :: Rod-shaped Motility              :: Nonmotile Sporulation           :: Nonsporulating Temperature Range     :: Mesophile Temperature Optimum   :: 37C Gram Staining         :: gram- Biotic Relationship   :: Free living Diseases              :: Endocarditis, Haverhill fever, Rat-bite                          fever Habitat               :: Host Phenotypes            :: Pathogen ##Metadata-END## COMPLETENESS: full length.