-- dump date 20250217_003441 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP012646.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP012646.1.REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1;REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0xREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeqREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted) :: 10 of 34REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted) :: 10 of 34 Pseudo Genes (incomplete) :: 23 of 34REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted) :: 10 of 34 Pseudo Genes (incomplete) :: 23 of 34 Pseudo Genes (internal stop) :: 13 of 34REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted) :: 10 of 34 Pseudo Genes (incomplete) :: 23 of 34 Pseudo Genes (internal stop) :: 13 of 34 Pseudo Genes (multiple problems) :: 9 of 34REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted) :: 10 of 34 Pseudo Genes (incomplete) :: 23 of 34 Pseudo Genes (internal stop) :: 13 of 34 Pseudo Genes (multiple problems) :: 9 of 34 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP012646.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 2014 Assembly Method :: AllPaths_LG v. 47944; SSPACE v. 2.3.1; GapCloser v. 1.21 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1331.0x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001281025.1-RS_2024_07_15 Annotation Date :: 07/15/2024 01:04:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 1,866 CDSs (total) :: 1,808 Genes (coding) :: 1,774 CDSs (with protein) :: 1,774 Genes (RNA) :: 58 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 34 CDSs (without protein) :: 34 Pseudo Genes (ambiguous residues) :: 0 of 34 Pseudo Genes (frameshifted) :: 10 of 34 Pseudo Genes (incomplete) :: 23 of 34 Pseudo Genes (internal stop) :: 13 of 34 Pseudo Genes (multiple problems) :: 9 of 34 ##Genome-Annotation-Data-END## COMPLETENESS: full length.