-- dump date 20240506_001814 -- class Genbank::Contig -- table contig_comment -- id comment NC_013595.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001814.1.REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSMREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAMREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMarkREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soilREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shapedREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: SporulatingREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28CREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: SoilREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127 Pseudo Genes (multiple problems) :: 23 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127 Pseudo Genes (multiple problems) :: 23 of 127 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001814.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127 Pseudo Genes (multiple problems) :: 23 of 127 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_013596.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001815.1.REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSMREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAMREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMarkREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soilREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shapedREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: SporulatingREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28CREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: SoilREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127 Pseudo Genes (multiple problems) :: 23 of 127REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127 Pseudo Genes (multiple problems) :: 23 of 127 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001815.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4082769 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Streptosporangium roseum NI 9100, DSM 43021 Culture Collection ID :: DSM 43021, ATCC 12428, CBS 313.56, IAM 14294, IFO 3776, JCM 3005 GOLD Stamp ID :: Gi02229 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Vegetable garden soil Oxygen Requirement :: Aerobe Cell Shape :: Filament-shaped Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Soil ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 03:05:37 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 9,306 CDSs (total) :: 9,222 Genes (coding) :: 9,095 CDSs (with protein) :: 9,095 Genes (RNA) :: 84 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 3 Pseudo Genes (total) :: 127 CDSs (without protein) :: 127 Pseudo Genes (ambiguous residues) :: 0 of 127 Pseudo Genes (frameshifted) :: 42 of 127 Pseudo Genes (incomplete) :: 100 of 127 Pseudo Genes (internal stop) :: 10 of 127 Pseudo Genes (multiple problems) :: 23 of 127 ##Genome-Annotation-Data-END## COMPLETENESS: full length.