-- dump date 20240506_043228 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP066776.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP066776.1.REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university.REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0xREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeqREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8 CDSs (without protein) :: 8REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 8REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 8 Pseudo Genes (frameshifted) :: 0 of 8REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 8 Pseudo Genes (frameshifted) :: 0 of 8 Pseudo Genes (incomplete) :: 8 of 8REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 8 Pseudo Genes (frameshifted) :: 0 of 8 Pseudo Genes (incomplete) :: 8 of 8 Pseudo Genes (internal stop) :: 0 of 8REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 8 Pseudo Genes (frameshifted) :: 0 of 8 Pseudo Genes (incomplete) :: 8 of 8 Pseudo Genes (internal stop) :: 0 of 8 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP066776.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Shandong university. ##Genome-Assembly-Data-START## Assembly Method :: SMRT Link v. 5.0.1 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: SMRT Link 5.0.1 Genome Coverage :: 781.0x Sequencing Technology :: Illumina NovaSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/27/2024 14:51:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,845 CDSs (total) :: 2,774 Genes (coding) :: 2,766 CDSs (with protein) :: 2,766 Genes (RNA) :: 71 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 52 ncRNAs :: 4 Pseudo Genes (total) :: 8 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 8 Pseudo Genes (frameshifted) :: 0 of 8 Pseudo Genes (incomplete) :: 8 of 8 Pseudo Genes (internal stop) :: 0 of 8 ##Genome-Annotation-Data-END## COMPLETENESS: full length.