-- dump date 20240506_000106 -- class Genbank::Contig -- table contig_comment -- id comment NC_007604.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP000100.1.REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan GoldenREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu)REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9 Pseudo Genes (internal stop) :: 2 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9 Pseudo Genes (internal stop) :: 2 of 9 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP000100.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9 Pseudo Genes (internal stop) :: 2 of 9 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_007595.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP000101.1.REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan GoldenREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu)REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9 Pseudo Genes (internal stop) :: 2 of 9REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9 Pseudo Genes (internal stop) :: 2 of 9 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP000101.1. URL -- http://www.jgi.doe.gov Source DNA and bacteria available from Susan Golden (sgolden@tamu.edu) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Contacts: Paul Richardson (microbes@cuba.jgi-psf.org) Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000012525.1-RS_2024_04_10 Annotation Date :: 04/10/2024 16:24:06 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,767 CDSs (total) :: 2,712 Genes (coding) :: 2,703 CDSs (with protein) :: 2,703 Genes (RNA) :: 55 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 6 of 9 Pseudo Genes (internal stop) :: 2 of 9 ##Genome-Annotation-Data-END## COMPLETENESS: full length.