-- dump date   	20240506_002337
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_014209.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002032.1.REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area inREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          IcelandREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: IcelandREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: SporulatingREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: ThermophileREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: Thermophile Temperature Optimum   :: 70 - 75CREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: Thermophile Temperature Optimum   :: 70 - 75C pH                    :: 4.7 - 8.8REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: Thermophile Temperature Optimum   :: 70 - 75C pH                    :: 4.7 - 8.8 Gram Staining         :: gram+REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: Thermophile Temperature Optimum   :: 70 - 75C pH                    :: 4.7 - 8.8 Gram Staining         :: gram+ Biotic Relationship   :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: Thermophile Temperature Optimum   :: 70 - 75C pH                    :: 4.7 - 8.8 Gram Staining         :: gram+ Biotic Relationship   :: Free living Habitat               :: Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: Thermophile Temperature Optimum   :: 70 - 75C pH                    :: 4.7 - 8.8 Gram Staining         :: gram+ Biotic Relationship   :: Free living Habitat               :: Hot spring ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP002032.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085035 Source DNA available from Christopher L. Hemme (hemmecl@ou.edu) Organism available from DSMZ: DSM 11426 Contacts: Christopher L. Hemme (hemmecl@ou.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 02/15/2024 01:57:42 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 2,331 CDSs (total)                      :: 2,256 Genes (coding)                    :: 2,196 CDSs (with protein)               :: 2,196 Genes (RNA)                       :: 75 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 58 ncRNAs                            :: 5 Pseudo Genes (total)              :: 60 CDSs (without protein)            :: 60 Pseudo Genes (ambiguous residues) :: 0 of 60 Pseudo Genes (frameshifted)       :: 34 of 60 Pseudo Genes (incomplete)         :: 35 of 60 Pseudo Genes (internal stop)      :: 9 of 60 Pseudo Genes (multiple problems)  :: 16 of 60 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Thermoanaerobacter mathranii A3, DSM11426 Culture Collection ID :: DSM 11426, AIP 130.05, CIP 108742 GOLD Stamp ID         :: Gi02564 Greengenes ID         :: 13781 Isolation Site        :: Hot spring from Hverdagerdi-Hengil area in                          Iceland Isolation Country     :: Iceland Oxygen Requirement    :: Anaerobe Cell Shape            :: Rod-shaped Motility              :: Motile Sporulation           :: Sporulating Temperature Range     :: Thermophile Temperature Optimum   :: 70 - 75C pH                    :: 4.7 - 8.8 Gram Staining         :: gram+ Biotic Relationship   :: Free living Habitat               :: Hot spring ##Metadata-END## COMPLETENESS: full length.