-- dump date 20240506_063818 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP025490.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP025490.1.REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98xREFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; NanoporeREFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45 Pseudo Genes (multiple problems) :: 2 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45 Pseudo Genes (multiple problems) :: 2 of 45 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP025490.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45 Pseudo Genes (multiple problems) :: 2 of 45 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_AP025491.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP025491.1.REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98xREFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; NanoporeREFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45 Pseudo Genes (multiple problems) :: 2 of 45REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45 Pseudo Genes (multiple problems) :: 2 of 45 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 98x Sequencing Technology :: Illumina MiSeq; Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/12/2023 03:17:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,571 CDSs (total) :: 4,391 Genes (coding) :: 4,346 CDSs (with protein) :: 4,346 Genes (RNA) :: 180 rRNAs :: 16, 15, 15 (5S, 16S, 23S) complete rRNAs :: 16, 15, 15 (5S, 16S, 23S) tRNAs :: 130 ncRNAs :: 4 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 15 of 45 Pseudo Genes (incomplete) :: 25 of 45 Pseudo Genes (internal stop) :: 7 of 45 Pseudo Genes (multiple problems) :: 2 of 45 ##Genome-Annotation-Data-END## COMPLETENESS: full length.