-- dump date   	20240506_075456
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NZ_OX366388.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to OX366388.1.REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBioREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree ofREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assemblyREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBioREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing usingREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned withREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger.REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100 Pseudo Genes (ambiguous residues) :: 0 of 100REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100 Pseudo Genes (ambiguous residues) :: 0 of 100 Pseudo Genes (frameshifted)       :: 46 of 100REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100 Pseudo Genes (ambiguous residues) :: 0 of 100 Pseudo Genes (frameshifted)       :: 46 of 100 Pseudo Genes (incomplete)         :: 72 of 100REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100 Pseudo Genes (ambiguous residues) :: 0 of 100 Pseudo Genes (frameshifted)       :: 46 of 100 Pseudo Genes (incomplete)         :: 72 of 100 Pseudo Genes (internal stop)      :: 10 of 100REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100 Pseudo Genes (ambiguous residues) :: 0 of 100 Pseudo Genes (frameshifted)       :: 46 of 100 Pseudo Genes (incomplete)         :: 72 of 100 Pseudo Genes (internal stop)      :: 10 of 100 Pseudo Genes (multiple problems)  :: 22 of 100REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100 Pseudo Genes (ambiguous residues) :: 0 of 100 Pseudo Genes (frameshifted)       :: 46 of 100 Pseudo Genes (incomplete)         :: 72 of 100 Pseudo Genes (internal stop)      :: 10 of 100 Pseudo Genes (multiple problems)  :: 22 of 100 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to OX366388.1. The assembly icPhiCogn1.Wolbachia_sp_1.1 is based on 25x PacBio data and 10X Genomics Chromium data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm followed by polishing using FreeBayes-called variants from 10X short reads aligned with LongRanger. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 11/29/2023 06:18:33 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.6 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 1,696 CDSs (total)                      :: 1,655 Genes (coding)                    :: 1,555 CDSs (with protein)               :: 1,555 Genes (RNA)                       :: 41 rRNAs                             :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S) tRNAs                             :: 34 ncRNAs                            :: 4 Pseudo Genes (total)              :: 100 CDSs (without protein)            :: 100 Pseudo Genes (ambiguous residues) :: 0 of 100 Pseudo Genes (frameshifted)       :: 46 of 100 Pseudo Genes (incomplete)         :: 72 of 100 Pseudo Genes (internal stop)      :: 10 of 100 Pseudo Genes (multiple problems)  :: 22 of 100 ##Genome-Annotation-Data-END## COMPLETENESS: full length.