AC MA0260.1 XX ID che-1 XX DE MA0260.1 che-1; from JASPAR PO A C G T 1 0 0 37 0 2 37 0 0 0 3 37 0 0 0 4 19 0 18 0 5 0 37 0 0 6 0 26 11 0 XX CC program: jaspar CC matrix.nb: 1 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 6.39812911951184 CC information.per.column: 1.06635485325197 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: GAAaCC CC consensus.strict.rc: GGTTTC CC consensus.IUPAC: GAArCS CC consensus.IUPAC.rc: SGYTTC CC consensus.regexp: GAA[ag]C[CG] CC consensus.regexp.rc: [CG]G[CT]TTC CC residues.content.crude.freq: a:0.4189|c:0.2838|g:0.2973|t:0.0000 CC G+C.content.crude.freq: 0.581081081081081 CC residues.content.corrected.freq: a:0.4145|c:0.2829|g:0.2961|t:0.0066 CC G+C.content.corrected.freq: 0.578947368421053 XX // AC MA0261.1 XX ID lin-14 XX DE MA0261.1 lin-14; from JASPAR PO A C G T 1 0 0 159 0 2 159 0 0 0 3 159 0 0 0 4 0 159 0 0 5 84 7 56 12 6 6 84 29 39 XX CC program: jaspar CC matrix.nb: 2 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 6.01518582396597 CC information.per.column: 1.00253097066099 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: GAACac CC consensus.strict.rc: GTGTTC CC consensus.IUPAC: GAACrc CC consensus.IUPAC.rc: GYGTTC CC consensus.regexp: GAAC[ag]c CC consensus.regexp.rc: G[CT]GTTC CC residues.content.crude.freq: a:0.4277|c:0.2626|g:0.2560|t:0.0537 CC G+C.content.crude.freq: 0.518569381418677 CC residues.content.corrected.freq: a:0.4266|c:0.2625|g:0.2559|t:0.0549 CC G+C.content.corrected.freq: 0.518451912997903 XX // AC MA0262.1 XX ID mab-3 XX DE MA0262.1 mab-3; from JASPAR PO A C G T 1 76 3 13 8 2 86 0 0 14 3 0 1 0 99 4 0 0 100 0 5 0 0 0 100 6 0 0 0 100 7 0 0 100 0 8 0 100 0 0 9 13 19 67 1 10 62 0 11 27 11 50 0 6 44 12 29 13 22 36 13 8 8 10 74 XX CC program: jaspar CC matrix.nb: 3 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 11.5175630645149 CC information.per.column: 0.885966389578073 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: AATGTTGCgaatT CC consensus.strict.rc: AATTCGCAACATT CC consensus.IUPAC: AATGTTGCgwwwT CC consensus.IUPAC.rc: AWWWCGCAACATT CC consensus.regexp: AATGTTGCg[at][at][at]T CC consensus.regexp.rc: A[AT][AT][AT]CGCAACATT CC residues.content.crude.freq: a:0.2492|c:0.1108|g:0.2531|t:0.3869 CC G+C.content.crude.freq: 0.363846153846154 CC residues.content.corrected.freq: a:0.2492|c:0.1121|g:0.2530|t:0.3856 CC G+C.content.corrected.freq: 0.365194211728865 XX // AC MA0263.1 XX ID ttx-3::ceh-10 XX DE MA0263.1 ttx-3::ceh-10; from JASPAR PO A C G T 1 28 0 1 0 2 0 0 1 28 3 1 0 0 28 4 9 0 20 0 5 0 0 28 1 6 2 16 1 10 7 3 5 1 20 8 1 5 0 23 9 14 15 0 0 10 4 3 22 0 11 0 0 0 29 12 0 2 0 27 13 24 1 0 4 14 15 0 9 5 XX CC program: jaspar CC matrix.nb: 4 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 11.2458131342369 CC information.per.column: 0.803272366731208 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: ATTgGctTcGTTAa CC consensus.strict.rc: TTAACGAAGCCAAT CC consensus.IUPAC: ATTrGytTmGTTAr CC consensus.IUPAC.rc: YTAACKAARCYAAT CC consensus.regexp: ATT[ag]G[ct]tT[ac]GTTA[ag] CC consensus.regexp.rc: [CT]TAAC[GT]AA[AG]C[CT]AAT CC residues.content.crude.freq: a:0.2488|c:0.1158|g:0.2044|t:0.4310 CC G+C.content.crude.freq: 0.320197044334975 CC residues.content.corrected.freq: a:0.2488|c:0.1202|g:0.2060|t:0.4250 CC G+C.content.corrected.freq: 0.326190476190476 XX // AC MA0264.1 XX ID ceh-22 XX DE MA0264.1 ceh-22; from JASPAR PO A C G T 1 33 15 31 19 2 8 71 19 0 3 0 89 0 9 4 93 1 0 5 5 1 97 0 0 6 0 0 0 99 7 0 16 0 83 8 7 27 63 1 9 95 0 0 4 10 46 29 20 3 11 51 20 15 12 XX CC program: jaspar CC matrix.nb: 5 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 8.40373817641475 CC information.per.column: 0.763976197855886 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: aCCACTTgAaa CC consensus.strict.rc: TTTCAAGTGGT CC consensus.IUPAC: rCCACTTsAma CC consensus.IUPAC.rc: TKTSAAGTGGY CC consensus.regexp: [ag]CCACTT[cg]A[ac]a CC consensus.regexp.rc: T[GT]T[CG]AAGTGG[CT] CC residues.content.crude.freq: a:0.3081|c:0.3384|g:0.1373|t:0.2162 CC G+C.content.crude.freq: 0.475721969228463 CC residues.content.corrected.freq: a:0.3075|c:0.3375|g:0.1384|t:0.2166 CC G+C.content.corrected.freq: 0.47595041322314 XX // AC MA0537.1 XX ID BLMP-1 XX DE MA0537.1 BLMP-1; from JASPAR PO A C G T 1 1909 0 1459 0 2 3092 0 266 10 3 2926 0 442 0 4 3216 0 152 0 5 842 0 2060 466 6 1157 335 548 1328 7 0 0 3368 0 8 3368 0 0 0 9 2129 0 1086 153 10 3081 0 254 33 11 1745 128 1383 112 XX CC program: jaspar CC matrix.nb: 6 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 9.44137199019397 CC information.per.column: 0.858306544563088 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: aAAAgtGAaAa CC consensus.strict.rc: TTTTCACTTTT CC consensus.IUPAC: rAAArwGArAr CC consensus.IUPAC.rc: YTYTCWYTTTY CC consensus.regexp: [ag]AAA[ag][at]GA[ag]A[ag] CC consensus.regexp.rc: [CT]T[CT]TC[AT][CT]TTT[CT] CC residues.content.crude.freq: a:0.6334|c:0.0125|g:0.2974|t:0.0567 CC G+C.content.crude.freq: 0.309895270999784 CC residues.content.corrected.freq: a:0.6333|c:0.0126|g:0.2974|t:0.0568 CC G+C.content.corrected.freq: 0.309951698642705 XX // AC MA0538.1 XX ID DAF-12 XX DE MA0538.1 DAF-12; from JASPAR PO A C G T 1 22 20 113 1 2 71 0 13 72 3 33 0 123 0 4 23 52 6 75 5 0 0 156 0 6 0 52 0 104 7 0 0 156 0 8 15 25 14 102 9 0 20 97 39 10 1 0 0 155 11 0 1 154 1 12 0 79 16 61 13 32 0 84 40 14 17 20 28 91 15 17 43 56 40 XX CC program: jaspar CC matrix.nb: 7 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 10.115132009282 CC information.per.column: 0.674342133952136 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: GtGtGtGtgTGcgtg CC consensus.strict.rc: CACGCACACACACAC CC consensus.IUPAC: GwGyGyGtkTGyktb CC consensus.IUPAC.rc: VAMRCAMACRCRCWC CC consensus.regexp: G[at]G[ct]G[ct]Gt[gt]TG[ct][gt]t[cgt] CC consensus.regexp.rc: [ACG]A[AC][AG]CA[AC]AC[AG]C[AG]C[AT]C CC residues.content.crude.freq: a:0.0987|c:0.1333|g:0.4342|t:0.3338 CC G+C.content.crude.freq: 0.567521367521368 CC residues.content.corrected.freq: a:0.0997|c:0.1341|g:0.4330|t:0.3332 CC G+C.content.corrected.freq: 0.567091295116773 XX // AC MA0540.1 XX ID DPY-27 XX DE MA0540.1 DPY-27; from JASPAR PO A C G T 1 0 6 3 13 2 2 8 8 4 3 1 0 3 18 4 1 19 0 2 5 0 22 0 0 6 0 22 0 0 7 0 0 0 22 8 0 0 14 8 9 1 19 1 1 10 0 0 22 0 11 0 21 0 1 12 3 3 13 3 13 16 0 0 6 14 8 0 3 11 15 9 0 6 7 16 12 1 9 0 XX CC program: jaspar CC matrix.nb: 8 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 11.2918073117769 CC information.per.column: 0.705737956986058 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: tcTCCCTgCGCgAtaa CC consensus.strict.rc: TTATCGCGCAGGGAGA CC consensus.IUPAC: ysTCCCTkCGCgWwdr CC consensus.IUPAC.rc: YHWWCGCGMAGGGASR CC consensus.regexp: [ct][cg]TCCCT[gt]CGCg[AT][at][agt][ag] CC consensus.regexp.rc: [CT][ACT][AT][AT]CGCG[AC]AGGGA[CG][AG] CC residues.content.crude.freq: a:0.1506|c:0.3438|g:0.2330|t:0.2727 CC G+C.content.crude.freq: 0.576704545454546 CC residues.content.corrected.freq: a:0.1549|c:0.3397|g:0.2337|t:0.2717 CC G+C.content.corrected.freq: 0.573369565217391 XX // AC MA0541.1 XX ID EFL-1 XX DE MA0541.1 EFL-1; from JASPAR PO A C G T 1 662 738 194 612 2 589 391 811 415 3 580 799 166 661 4 352 314 875 665 5 92 1150 893 71 6 61 22 2123 0 7 11 2192 3 0 8 0 0 2206 0 9 0 1239 967 0 10 133 628 1445 0 11 2096 55 18 37 12 2011 26 156 13 13 1424 137 177 468 14 696 214 171 1125 15 319 389 352 1146 XX CC program: jaspar CC matrix.nb: 9 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 8.96495969189786 CC information.per.column: 0.597663979459857 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: cgcgcGCGcgAAatt CC consensus.strict.rc: AATTTCGCGCGCGCG CC consensus.IUPAC: hrhksGCGssAAawt CC consensus.IUPAC.rc: AWTTTSSCGCSMDYD CC consensus.regexp: [act][ag][act][gt][cg]GCG[cg][cg]AAa[at]t CC consensus.regexp.rc: A[AT]TTT[CG][CG]CGC[CG][AC][AGT][CT][AGT] CC residues.content.crude.freq: a:0.2728|c:0.2506|g:0.3190|t:0.1575 CC G+C.content.crude.freq: 0.5696887277123 CC residues.content.corrected.freq: a:0.2728|c:0.2506|g:0.3190|t:0.1576 CC G+C.content.corrected.freq: 0.569657151487691 XX // AC MA0542.1 XX ID ELT-3 XX DE MA0542.1 ELT-3; from JASPAR PO A C G T 1 0 108 0 614 2 0 432 124 166 3 0 0 0 722 4 0 0 0 722 5 722 0 0 0 6 0 0 0 722 7 0 722 0 0 8 722 0 0 0 XX CC program: jaspar CC matrix.nb: 10 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 9.65526162457771 CC information.per.column: 1.20690770307221 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: TcTTATCA CC consensus.strict.rc: TGATAAGA CC consensus.IUPAC: TcTTATCA CC consensus.IUPAC.rc: TGATAAGA CC consensus.regexp: TcTTATCA CC consensus.regexp.rc: TGATAAGA CC residues.content.crude.freq: a:0.2500|c:0.2185|g:0.0215|t:0.5100 CC G+C.content.crude.freq: 0.239958448753463 CC residues.content.corrected.freq: a:0.2500|c:0.2185|g:0.0218|t:0.5097 CC G+C.content.corrected.freq: 0.240318118948824 XX // AC MA0543.1 XX ID EOR-1 XX DE MA0543.1 EOR-1; from JASPAR PO A C G T 1 439 169 427 218 2 457 133 497 166 3 939 89 167 58 4 133 2 1113 5 5 1206 1 0 46 6 100 0 1126 27 7 1153 12 70 18 8 262 597 319 75 9 429 44 694 86 10 237 547 403 66 11 1184 41 28 0 12 74 28 1151 0 13 1170 3 74 6 14 202 336 686 29 15 974 26 184 69 XX CC program: jaspar CC matrix.nb: 11 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 10.1195187345253 CC information.per.column: 0.674634582301684 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: agAGAGAcgcAGAgA CC consensus.strict.rc: TCTCTGCGTCTCTCT CC consensus.IUPAC: rrAGAGAsrsAGAsA CC consensus.IUPAC.rc: TSTCTSYSTCTCTYY CC consensus.regexp: [ag][ag]AGAGA[cg][ag][cg]AGA[cg]A CC consensus.regexp.rc: T[CG]TCT[CG][CT][CG]TCTCT[CT][CT] CC residues.content.crude.freq: a:0.4767|c:0.1079|g:0.3692|t:0.0462 CC G+C.content.crude.freq: 0.477094972067039 CC residues.content.corrected.freq: a:0.4765|c:0.1080|g:0.3691|t:0.0464 CC G+C.content.corrected.freq: 0.477113237639553 XX // AC MA0544.1 XX ID GEI-11 XX DE MA0544.1 GEI-11; from JASPAR PO A C G T 1 90 7 175 38 2 3 34 3 270 3 0 0 310 0 4 2 2 0 306 5 3 305 0 2 6 8 12 278 12 7 4 2 299 5 8 12 256 15 27 9 0 179 30 101 10 10 0 296 4 11 0 293 1 16 12 39 65 37 169 XX CC program: jaspar CC matrix.nb: 12 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 11.0792329344902 CC information.per.column: 0.92326941120752 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: gTGTCGGCcGCt CC consensus.strict.rc: AGCGGCCGACAC CC consensus.IUPAC: rTGTCGGCyGCt CC consensus.IUPAC.rc: AGCRGCCGACAY CC consensus.regexp: [ag]TGTCGGC[ct]GCt CC consensus.regexp.rc: AGC[AG]GCCGACA[CT] CC residues.content.crude.freq: a:0.0460|c:0.3105|g:0.3882|t:0.2554 CC G+C.content.crude.freq: 0.698655913978495 CC residues.content.corrected.freq: a:0.0466|c:0.3103|g:0.3877|t:0.2554 CC G+C.content.corrected.freq: 0.698017148981779 XX // AC MA0545.1 XX ID HLH-1 XX DE MA0545.1 HLH-1; from JASPAR PO A C G T 1 71 139 148 23 2 306 22 53 0 3 289 15 72 5 4 0 381 0 0 5 381 0 0 0 6 68 13 297 3 7 23 264 12 82 8 0 3 0 378 9 0 0 381 0 10 97 75 77 132 11 0 261 22 98 XX CC program: jaspar CC matrix.nb: 13 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 8.92156956700099 CC information.per.column: 0.811051778818272 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: gAACAGCTGtC CC consensus.strict.rc: GACAGCTGTTC CC consensus.IUPAC: sAACAGCTGwY CC consensus.IUPAC.rc: RWCAGCTGTTS CC consensus.regexp: [cg]AACAGCTG[at][CT] CC consensus.regexp.rc: [AG][AT]CAGCTGTT[CG] CC residues.content.crude.freq: a:0.2947|c:0.2799|g:0.2534|t:0.1720 CC G+C.content.crude.freq: 0.53328561202577 CC residues.content.corrected.freq: a:0.2946|c:0.2798|g:0.2534|t:0.1722 CC G+C.content.corrected.freq: 0.533198476915754 XX // AC MA0546.1 XX ID PHA-4 XX DE MA0546.1 PHA-4; from JASPAR PO A C G T 1 585 71 0 354 2 534 0 471 5 3 537 0 79 394 4 41 0 969 0 5 0 407 0 603 6 862 148 0 0 7 1010 0 0 0 8 1010 0 0 0 9 0 623 0 387 10 1010 0 0 0 XX CC program: jaspar CC matrix.nb: 14 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 9.39748989472527 CC information.per.column: 0.939748989472527 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: aaaGtAAAcA CC consensus.strict.rc: TGTTTACTTT CC consensus.IUPAC: wrwGyAAAyA CC consensus.IUPAC.rc: TRTTTRCWYW CC consensus.regexp: [at][ag][at]G[ct]AAA[ct]A CC consensus.regexp.rc: T[AG]TTT[AG]C[AT][CT][AT] CC residues.content.crude.freq: a:0.5534|c:0.1237|g:0.1504|t:0.1726 CC G+C.content.crude.freq: 0.274059405940594 CC residues.content.corrected.freq: a:0.5531|c:0.1238|g:0.1505|t:0.1727 CC G+C.content.corrected.freq: 0.274282888229476 XX // AC MA0547.1 XX ID SKN-1 XX DE MA0547.1 SKN-1; from JASPAR PO A C G T 1 190 43 62 23 2 237 12 39 30 3 209 24 55 30 4 268 0 16 34 5 32 36 26 224 6 0 17 301 0 7 265 35 5 13 8 20 0 0 298 9 0 0 318 0 10 318 0 0 0 11 31 179 22 86 12 249 0 28 41 13 240 0 0 78 14 139 16 21 142 15 92 37 53 136 XX CC program: jaspar CC matrix.nb: 15 CC min.prior: 0.25 CC alphabet.size: 4 CC max.bits: 2 CC total.information: 10.6340876266807 CC information.per.column: 0.70893917511205 CC max.possible.info.per.col: 1.38629436111989 CC consensus.strict: aAaATGATGAcAAtt CC consensus.strict.rc: AATTGTCATCATTTT CC consensus.IUPAC: aAaATGATGAyAAww CC consensus.IUPAC.rc: WWTTRTCATCATTTT CC consensus.regexp: aAaATGATGA[ct]AA[at][at] CC consensus.regexp.rc: [AT][AT]TT[AG]TCATCATTTT CC residues.content.crude.freq: a:0.4801|c:0.0836|g:0.1983|t:0.2379 CC G+C.content.crude.freq: 0.281970649895178 CC residues.content.corrected.freq: a:0.4794|c:0.0842|g:0.1985|t:0.2380 CC G+C.content.corrected.freq: 0.282654127481714 XX //