AC AtMYB0_I/AtMYB0_I/AthaMYB XX ID AtMYB0_I:AtMYB0_I:AthaMYB XX NA AtMYB0_I XX DE AtMYB0_I XX OS Arabidopsis thaliana XX BF 10295; BF 10301; BF 10321; BF 10327; BF 10336; BF 10352; BF 10358; BF 10360; BF 10361; BF 10377; BF 10390; BF 10394; BF 10395; BF 10401; BF 10407; XX P0 A C G T 01 3 0 1 1 a 02 2 1 0 2 w 03 2 2 0 1 m 04 4 0 0 1 A 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 3 0 2 0 r XX BS 35087; BS 35088; BS 35092; BS 35097; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB0_I:AtMYB0_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB0_II/AtMYB0_II/AthaMYB XX ID AtMYB0_II:AtMYB0_II:AthaMYB XX NA AtMYB0_II XX DE AtMYB0_II XX OS Arabidopsis thaliana XX BF 10295; XX P0 A C G T 01 1 0 2 0 r 02 0 0 1 2 k 03 0 0 0 3 T 04 3 0 0 0 A 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35090; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB0_II:AtMYB0_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB100_I/AtMYB100_I/AthaMYB XX ID AtMYB100_I:AtMYB100_I:AthaMYB XX NA AtMYB100_I XX DE AtMYB100_I XX OS Arabidopsis thaliana XX BF 10298; BF 10304; BF 10307; BF 10315; BF 10328; BF 10296; BF 10333; BF 10335; BF 10340; BF 10353; BF 10363; BF 10372; BF 10376; BF 10379; BF 10381; BF 10384; BF 10388; BF 10389; BF 10397; BF 10400; XX P0 A C G T 01 2 0 1 2 w 02 2 1 1 1 a 03 2 3 0 0 m 04 3 0 1 1 a 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 3 0 2 0 r XX BS 35087; BS 35088; BS 35097; BS 35099; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB100_I:AtMYB100_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB100_II/AtMYB100_II/AthaMYB XX ID AtMYB100_II:AtMYB100_II:AthaMYB XX NA AtMYB100_II XX DE AtMYB100_II XX OS Arabidopsis thaliana XX BF 10298; BF 10303; BF 10307; BF 10314; XX P0 A C G T 01 0 0 1 0 G 02 0 0 0 1 T 03 0 0 0 1 T 04 1 0 0 0 A 05 0 0 1 0 G 06 0 0 0 1 T 07 0 0 0 1 T 08 1 0 0 0 A XX BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB100_II:AtMYB100_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB101_I/AtMYB101_I/AthaMYB XX ID AtMYB101_I:AtMYB101_I:AthaMYB XX NA AtMYB101_I XX DE AtMYB101_I XX OS Arabidopsis thaliana XX BF 10299; BF 10310; BF 10314; XX P0 A C G T 01 0 0 1 1 k 02 1 0 0 1 w 03 0 2 0 0 C 04 1 0 0 1 w 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35097; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB101_I:AtMYB101_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB101_II/AtMYB101_II/AthaMYB XX ID AtMYB101_II:AtMYB101_II:AthaMYB XX NA AtMYB101_II XX DE AtMYB101_II XX OS Arabidopsis thaliana XX BF 10299; BF 10375; BF 10409; XX P0 A C G T 01 0 0 2 0 G 02 0 0 0 2 T 03 0 0 0 2 T 04 2 0 0 0 A 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB101_II:AtMYB101_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB102_I/AtMYB102_I/AthaMYB XX ID AtMYB102_I:AtMYB102_I:AthaMYB XX NA AtMYB102_I XX DE AtMYB102_I XX OS Arabidopsis thaliana XX BF 10300; BF 10305; BF 10311; BF 10312; BF 10313; BF 10317; BF 10308; BF 10320; BF 10322; BF 10323; BF 10332; BF 10341; BF 10342; BF 10345; BF 10347; BF 10349; BF 10350; BF 10351; BF 10356; BF 10357; BF 10362; BF 10364; BF 10365; BF 10366; BF 10368; BF 10359; BF 10371; BF 10378; BF 10385; BF 10386; BF 10393; BF 10398; BF 10403; BF 10404; BF 10410; BF 10402; XX P0 A C G T 01 3 0 1 2 w 02 2 1 1 2 w 03 2 3 0 1 m 04 4 0 1 1 a 05 0 0 6 0 G 06 0 0 0 6 T 07 0 0 0 6 T 08 3 0 3 0 r XX BS 35087; BS 35088; BS 35092; BS 35097; BS 35099; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB102_I:AtMYB102_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB102_II/AtMYB102_II/AthaMYB XX ID AtMYB102_II:AtMYB102_II:AthaMYB XX NA AtMYB102_II XX DE AtMYB102_II XX OS Arabidopsis thaliana XX BF 10300; BF 10403; XX P0 A C G T 01 1 0 1 0 r 02 0 1 1 0 s 03 0 0 0 2 T 04 0 0 1 1 k 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35091; BS 35094; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB102_II:AtMYB102_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB103_II/AtMYB103_II/AthaMYB XX ID AtMYB103_II:AtMYB103_II:AthaMYB XX NA AtMYB103_II XX DE AtMYB103_II XX OS Arabidopsis thaliana XX BF 10301; XX P0 A C G T 01 2 0 6 0 R 02 0 1 5 2 k 03 0 0 0 8 T 04 5 0 1 2 w 05 0 0 8 0 G 06 0 0 2 6 K 07 0 0 0 8 T 08 4 0 4 0 r XX BS 35090; BS 35091; BS 35094; BS 35095; BS 35096; BS 19337; BS 35098; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB103_II:AtMYB103_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB104_I/AtMYB104_I/AthaMYB XX ID AtMYB104_I:AtMYB104_I:AthaMYB XX NA AtMYB104_I XX DE AtMYB104_I XX OS Arabidopsis thaliana XX BF 10302; BF 10374; XX P0 A C G T 01 0 0 0 1 T 02 1 0 0 0 A 03 0 1 0 0 C 04 0 0 0 1 T 05 0 0 1 0 G 06 0 0 0 1 T 07 0 0 0 1 T 08 0 0 1 0 G XX BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB104_I:AtMYB104_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB105_I/AtMYB105_I/AthaMYB XX ID AtMYB105_I:AtMYB105_I:AthaMYB XX NA AtMYB105_I XX DE AtMYB105_I XX OS Arabidopsis thaliana XX BF 10303; BF 10331; XX P0 A C G T 01 3 0 0 1 W 02 2 1 0 1 h 03 2 1 0 1 h 04 3 0 0 1 W 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35087; BS 35088; BS 35092; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB105_I:AtMYB105_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB106_II/AtMYB106_II/AthaMYB XX ID AtMYB106_II:AtMYB106_II:AthaMYB XX NA AtMYB106_II XX DE AtMYB106_II XX OS Arabidopsis thaliana XX BF 10304; BF 10341; BF 10342; BF 10346; BF 10338; BF 10386; BF 10380; XX P0 A C G T 01 0 0 1 0 G 02 0 1 0 0 C 03 0 0 0 1 T 04 0 0 0 1 T 05 0 0 1 0 G 06 0 0 0 1 T 07 0 0 0 1 T 08 0 0 1 0 G XX BS 35094; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB106_II:AtMYB106_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB107_II/AtMYB107_II/AthaMYB XX ID AtMYB107_II:AtMYB107_II:AthaMYB XX NA AtMYB107_II XX DE AtMYB107_II XX OS Arabidopsis thaliana XX BF 10305; XX P0 A C G T 01 1 0 2 0 r 02 0 1 1 1 b 03 0 0 0 3 T 04 1 0 1 1 d 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35091; BS 35094; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB107_II:AtMYB107_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB108_I/AtMYB108_I/AthaMYB XX ID AtMYB108_I:AtMYB108_I:AthaMYB XX NA AtMYB108_I XX DE AtMYB108_I XX OS Arabidopsis thaliana XX BF 10306; XX P0 A C G T 01 2 0 0 2 w 02 2 1 1 0 v 03 2 2 0 0 m 04 2 0 1 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35087; BS 35088; BS 35099; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB108_I:AtMYB108_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB108_II/AtMYB108_II/AthaMYB XX ID AtMYB108_II:AtMYB108_II:AthaMYB XX NA AtMYB108_II XX DE AtMYB108_II XX OS Arabidopsis thaliana XX BF 10306; BF 10372; XX P0 A C G T 01 0 0 2 0 G 02 0 0 0 2 T 03 1 0 0 1 w 04 1 0 1 0 r 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35089; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB108_II:AtMYB108_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB10_I/AtMYB10_I/AthaMYB XX ID AtMYB10_I:AtMYB10_I:AthaMYB XX NA AtMYB10_I XX DE AtMYB10_I XX OS Arabidopsis thaliana XX BF 10297; XX P0 A C G T 01 2 0 0 1 w 02 2 0 0 1 w 03 1 1 0 1 h 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35087; BS 35092; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB10_I:AtMYB10_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB10_II/AtMYB10_II/AthaMYB XX ID AtMYB10_II:AtMYB10_II:AthaMYB XX NA AtMYB10_II XX DE AtMYB10_II XX OS Arabidopsis thaliana XX BF 10297; XX P0 A C G T 01 2 0 5 0 R 02 0 1 5 1 G 03 1 0 0 6 T 04 3 0 2 2 d 05 0 0 7 0 G 06 0 0 2 5 K 07 0 0 0 7 T 08 3 0 4 0 r XX BS 35089; BS 35090; BS 35091; BS 35094; BS 35095; BS 35096; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB10_II:AtMYB10_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB110_I/AtMYB110_I/AthaMYB XX ID AtMYB110_I:AtMYB110_I:AthaMYB XX NA AtMYB110_I XX DE AtMYB110_I XX OS Arabidopsis thaliana XX BF 10309; BF 10319; BF 10334; BF 10344; BF 10338; BF 10354; BF 10369; BF 10382; XX P0 A C G T 01 2 0 1 1 d 02 2 1 0 1 h 03 2 2 0 0 m 04 3 0 0 1 W 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 3 0 1 0 R XX BS 35087; BS 35088; BS 35097; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB110_I:AtMYB110_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB110_II/AtMYB110_II/AthaMYB XX ID AtMYB110_II:AtMYB110_II:AthaMYB XX NA AtMYB110_II XX DE AtMYB110_II XX OS Arabidopsis thaliana XX BF 10309; XX P0 A C G T 01 1 0 1 0 r 02 0 0 1 1 k 03 0 0 0 2 T 04 1 0 1 0 r 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A XX BS 35091; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB110_II:AtMYB110_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB111_II/AtMYB111_II/AthaMYB XX ID AtMYB111_II:AtMYB111_II:AthaMYB XX NA AtMYB111_II XX DE AtMYB111_II XX OS Arabidopsis thaliana XX BF 10310; XX P0 A C G T 01 0 0 3 0 G 02 0 0 2 1 k 03 0 0 0 3 T 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 2 1 k 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35095; BS 35096; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB111_II:AtMYB111_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB112_II/AtMYB112_II/AthaMYB XX ID AtMYB112_II:AtMYB112_II:AthaMYB XX NA AtMYB112_II XX DE AtMYB112_II XX OS Arabidopsis thaliana XX BF 10311; XX P0 A C G T 01 2 0 3 0 r 02 0 1.67 1.67 1.67 b 03 1 0 0 4 T 04 3 0 1 1 a 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 3 0 2 0 r XX BS 35089; BS 35090; BS 35094; BS 35098; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB112_II:AtMYB112_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB113_II/AtMYB113_II/AthaMYB XX ID AtMYB113_II:AtMYB113_II:AthaMYB XX NA AtMYB113_II XX DE AtMYB113_II XX OS Arabidopsis thaliana XX BF 10312; XX P0 A C G T 01 1 0 3 0 R 02 0 1.33 1.33 1.33 b 03 0 0 0 4 T 04 2 0 1 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 3 0 1 0 R XX BS 35091; BS 35094; BS 19337; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB113_II:AtMYB113_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB114_II/AtMYB114_II/AthaMYB XX ID AtMYB114_II:AtMYB114_II:AthaMYB XX NA AtMYB114_II XX DE AtMYB114_II XX OS Arabidopsis thaliana XX BF 10313; BF 10308; XX P0 A C G T 01 1.50 0 1.50 0 r 02 0 1.50 1.50 0 s 03 0 0 0 3 T 04 1 0 1 1 d 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35091; BS 35094; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB114_II:AtMYB114_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB116_II/AtMYB116_II/AthaMYB XX ID AtMYB116_II:AtMYB116_II:AthaMYB XX NA AtMYB116_II XX DE AtMYB116_II XX OS Arabidopsis thaliana XX BF 10315; XX P0 A C G T 01 1 0 0 0 A 02 0 0 1 0 G 03 0 0 0 1 T 04 1 0 0 0 A 05 0 0 1 0 G 06 0 0 0 1 T 07 0 0 0 1 T 08 1 0 0 0 A XX BS 35090; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB116_II:AtMYB116_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB117_I/AtMYB117_I/AthaMYB XX ID AtMYB117_I:AtMYB117_I:AthaMYB XX NA AtMYB117_I XX DE AtMYB117_I XX OS Arabidopsis thaliana XX BF 10316; BF 10329; XX P0 A C G T 01 2 0 0 1 w 02 2 1 0 0 m 03 2 1 0 0 m 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35087; BS 35088; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB117_I:AtMYB117_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB117_II/AtMYB117_II/AthaMYB XX ID AtMYB117_II:AtMYB117_II:AthaMYB XX NA AtMYB117_II XX DE AtMYB117_II XX OS Arabidopsis thaliana XX BF 10316; XX P0 A C G T 01 1 0 0 0 A 02 0 0 1 0 G 03 0 0 0 1 T 04 0 0 1 0 G 05 0 0 1 0 G 06 0 0 0 1 T 07 0 0 0 1 T 08 1 0 0 0 A XX BS 35091; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB117_II:AtMYB117_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB118_II/AtMYB118_II/AthaMYB XX ID AtMYB118_II:AtMYB118_II:AthaMYB XX NA AtMYB118_II XX DE AtMYB118_II XX OS Arabidopsis thaliana XX BF 10317; XX P0 A C G T 01 0 0 2 0 G 02 0 0 0 2 T 03 1 0 0 1 w 04 1 0 1 0 r 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A XX BS 35089; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB118_II:AtMYB118_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB121_I/AtMYB121_I/AthaMYB XX ID AtMYB121_I:AtMYB121_I:AthaMYB XX NA AtMYB121_I XX DE AtMYB121_I XX OS Arabidopsis thaliana XX BF 10318; BF 10330; BF 10343; XX P0 A C G T 01 2 0 1 1 d 02 2 0 0 2 w 03 1 2 0 1 h 04 3 0 0 1 W 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35087; BS 35092; BS 35097; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB121_I:AtMYB121_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB121_II/AtMYB121_II/AthaMYB XX ID AtMYB121_II:AtMYB121_II:AthaMYB XX NA AtMYB121_II XX DE AtMYB121_II XX OS Arabidopsis thaliana XX BF 10318; XX P0 A C G T 01 2 0 5 0 R 02 0 1 4 2 k 03 0 0 0 7 T 04 4 0 1 2 w 05 0 0 7 0 G 06 0 0 2 5 K 07 0 0 0 7 T 08 3 0 4 0 r XX BS 35090; BS 35091; BS 35094; BS 35095; BS 35096; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB121_II:AtMYB121_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB122_II/AtMYB122_II/AthaMYB XX ID AtMYB122_II:AtMYB122_II:AthaMYB XX NA AtMYB122_II XX DE AtMYB122_II XX OS Arabidopsis thaliana XX BF 10319; XX P0 A C G T 01 0 0 2 0 G 02 0 2 0 0 C 03 1 0 0 1 w 04 0 0 1 1 k 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35089; BS 35094; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB122_II:AtMYB122_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB123_II/AtMYB123_II/AthaMYB XX ID AtMYB123_II:AtMYB123_II:AthaMYB XX NA AtMYB123_II XX DE AtMYB123_II XX OS Arabidopsis thaliana XX BF 10320; XX P0 A C G T 01 0 0 2 0 G 02 0 2 0 0 C 03 0 0 0 2 T 04 1 0 0 1 w 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35094; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB123_II:AtMYB123_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB124_II/AtMYB124_II/AthaMYB XX ID AtMYB124_II:AtMYB124_II:AthaMYB XX NA AtMYB124_II XX DE AtMYB124_II XX OS Arabidopsis thaliana XX BF 10321; BF 10366; XX P0 A C G T 01 1 0 3 0 R 02 0 1 1 2 b 03 0 0 0 4 T 04 3 0 0 1 W 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35090; BS 35094; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB124_II:AtMYB124_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB13_II/AtMYB13_II/AthaMYB XX ID AtMYB13_II:AtMYB13_II:AthaMYB XX NA AtMYB13_II XX DE AtMYB13_II XX OS Arabidopsis thaliana XX BF 10322; XX P0 A C G T 01 1 0 4 0 G 02 0 1 3 1 g 03 0 0 0 5 T 04 3 0 0 2 w 05 0 0 5 0 G 06 0 0 2 3 k 07 0 0 0 5 T 08 1 0 4 0 G XX BS 35090; BS 35094; BS 35095; BS 35096; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB13_II:AtMYB13_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB14_II/AtMYB14_II/AthaMYB XX ID AtMYB14_II:AtMYB14_II:AthaMYB XX NA AtMYB14_II XX DE AtMYB14_II XX OS Arabidopsis thaliana XX BF 10323; BF 10382; XX P0 A C G T 01 2 0 4 0 r 02 0 1 3 2 k 03 0 0 0 6 T 04 4 0 1 1 a 05 0 0 6 0 G 06 0 0 1 5 T 07 0 0 0 6 T 08 3 0 3 0 r XX BS 35090; BS 35091; BS 35094; BS 35095; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB14_II:AtMYB14_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB15_I/AtMYB15_I/AthaMYB XX ID AtMYB15_I:AtMYB15_I:AthaMYB XX NA AtMYB15_I XX DE AtMYB15_I XX OS Arabidopsis thaliana XX BF 10324; BF 10408; XX P0 A C G T 01 2 0 1 2 w 02 2 0 1 2 w 03 1 3 0 1 c 04 3 0 1 1 a 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 2 0 3 0 r XX BS 35087; BS 35092; BS 35097; BS 35099; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB15_I:AtMYB15_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB15_II/AtMYB15_II/AthaMYB XX ID AtMYB15_II:AtMYB15_II:AthaMYB XX NA AtMYB15_II XX DE AtMYB15_II XX OS Arabidopsis thaliana XX BF 10324; XX P0 A C G T 01 0 0 4 0 G 02 0 1 2 1 b 03 0 0 0 4 T 04 2 0 0 2 w 05 0 0 4 0 G 06 0 0 2 2 k 07 0 0 0 4 T 08 0 0 4 0 G XX BS 35094; BS 35095; BS 35096; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB15_II:AtMYB15_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB16_I/AtMYB16_I/AthaMYB XX ID AtMYB16_I:AtMYB16_I:AthaMYB XX NA AtMYB16_I XX DE AtMYB16_I XX OS Arabidopsis thaliana XX BF 10325; BF 10326; XX P0 A C G T 01 1 0 1 1 d 02 1 1 0 1 h 03 1 2 0 0 m 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35088; BS 35097; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB16_I:AtMYB16_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB16_II/AtMYB16_II/AthaMYB XX ID AtMYB16_II:AtMYB16_II:AthaMYB XX NA AtMYB16_II XX DE AtMYB16_II XX OS Arabidopsis thaliana XX BF 10325; BF 10334; BF 10329; XX P0 A C G T 01 0 0 1 0 G 02 0 0 1 0 G 03 0 0 0 1 T 04 1 0 0 0 A 05 0 0 1 0 G 06 0 0 1 0 G 07 0 0 0 1 T 08 0 0 1 0 G XX BS 35095; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB16_II:AtMYB16_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB18_II/AtMYB18_II/AthaMYB XX ID AtMYB18_II:AtMYB18_II:AthaMYB XX NA AtMYB18_II XX DE AtMYB18_II XX OS Arabidopsis thaliana XX BF 10327; XX P0 A C G T 01 3 0 0 0 A 02 0 0 3 0 G 03 1 0 0 2 w 04 1 0 2 0 r 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 3 0 0 0 A XX BS 35089; BS 35090; BS 35091; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB18_II:AtMYB18_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB19_II/AtMYB19_II/AthaMYB XX ID AtMYB19_II:AtMYB19_II:AthaMYB XX NA AtMYB19_II XX DE AtMYB19_II XX OS Arabidopsis thaliana XX BF 10328; XX P0 A C G T 01 1 0 4 0 G 02 0 0 3 2 k 03 0 0 0 5 T 04 3 0 1 1 a 05 0 0 5 0 G 06 0 0 2 3 k 07 0 0 0 5 T 08 2 0 3 0 r XX BS 35091; BS 35095; BS 35096; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB19_II:AtMYB19_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB1_II/AtMYB1_II/AthaMYB XX ID AtMYB1_II:AtMYB1_II:AthaMYB XX NA AtMYB1_II XX DE AtMYB1_II XX OS Arabidopsis thaliana XX BF 10296; XX P0 A C G T 01 1 0 0 0 A 02 0 0 1 0 G 03 0 0 1 0 G 04 0 0 0 1 T 05 0 0 0 1 T 06 1 0 0 0 A XX BS 35089; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB1_II:AtMYB1_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB20_II/AtMYB20_II/AthaMYB XX ID AtMYB20_II:AtMYB20_II:AthaMYB XX NA AtMYB20_II XX DE AtMYB20_II XX OS Arabidopsis thaliana XX BF 10330; XX P0 A C G T 01 1 0 3 0 R 02 0 1.33 1.33 1.33 b 03 1 0 0 3 W 04 1 0 2 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35089; BS 35091; BS 35094; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB20_II:AtMYB20_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB22_II/AtMYB22_II/AthaMYB XX ID AtMYB22_II:AtMYB22_II:AthaMYB XX NA AtMYB22_II XX DE AtMYB22_II XX OS Arabidopsis thaliana XX BF 10332; XX P0 A C G T 01 0 0 2 0 G 02 0 1 0 1 y 03 0 0 0 2 T 04 1 0 0 1 w 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35094; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB22_II:AtMYB22_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB23_II/AtMYB23_II/AthaMYB XX ID AtMYB23_II:AtMYB23_II:AthaMYB XX NA AtMYB23_II XX DE AtMYB23_II XX OS Arabidopsis thaliana XX BF 10333; XX P0 A C G T 01 0 0 4 0 G 02 0 1 0 3 Y 03 1 0 0 3 W 04 2 0 1 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35089; BS 35094; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB23_II:AtMYB23_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB26_II/AtMYB26_II/AthaMYB XX ID AtMYB26_II:AtMYB26_II:AthaMYB XX NA AtMYB26_II XX DE AtMYB26_II XX OS Arabidopsis thaliana XX BF 10336; XX P0 A C G T 01 0 0 3 0 G 02 0 1.50 0 1.50 y 03 0 0 0 3 T 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35094; BS 19337; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB26_II:AtMYB26_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB27_I/AtMYB27_I/AthaMYB XX ID AtMYB27_I:AtMYB27_I:AthaMYB XX NA AtMYB27_I XX DE AtMYB27_I XX OS Arabidopsis thaliana XX BF 10337; XX P0 A C G T 01 1 0 0 1 w 02 2 0 0 0 A 03 1 1 0 0 m 04 1 0 0 1 w 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35087; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB27_I:AtMYB27_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB27_II/AtMYB27_II/AthaMYB XX ID AtMYB27_II:AtMYB27_II:AthaMYB XX NA AtMYB27_II XX DE AtMYB27_II XX OS Arabidopsis thaliana XX BF 10337; BF 10357; XX P0 A C G T 01 2 0 4 0 r 02 0 1.20 2.40 2.40 k 03 1 0 0 5 T 04 3 0 2 1 r 05 0 0 6 0 G 06 0 0 0 6 T 07 0 0 0 6 T 08 4 0 2 0 r XX BS 35089; BS 35090; BS 35091; BS 35094; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB27_II:AtMYB27_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB30_I/AtMYB30_I/AthaMYB XX ID AtMYB30_I:AtMYB30_I:AthaMYB XX NA AtMYB30_I XX DE AtMYB30_I XX OS Arabidopsis thaliana XX BF 10339; XX P0 A C G T 01 1 0 1 1 d 02 1 0 1 1 d 03 1 2 0 0 m 04 2 0 1 0 r 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35087; BS 35097; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB30_I:AtMYB30_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB30_II/AtMYB30_II/AthaMYB XX ID AtMYB30_II:AtMYB30_II:AthaMYB XX NA AtMYB30_II XX DE AtMYB30_II XX OS Arabidopsis thaliana XX BF 10339; BF 10370; XX P0 A C G T 01 0 0 4 0 G 02 1 0 1 2 d 03 0 1 0 3 Y 04 4 0 0 0 A 05 0 0 4 0 G 06 0 0 1 3 K 07 0 0 0 4 T 08 1 0 3 0 R XX BS 35093; BS 35095; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB30_II:AtMYB30_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB31_II/AtMYB31_II/AthaMYB XX ID AtMYB31_II:AtMYB31_II:AthaMYB XX NA AtMYB31_II XX DE AtMYB31_II XX OS Arabidopsis thaliana XX BF 10340; XX P0 A C G T 01 0 0 3 0 G 02 1 1 1 0 v 03 0 1 0 2 y 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 1 2 k 07 0 0 0 3 T 08 0 0 3 0 G XX BS 35093; BS 35094; BS 35095; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB31_II:AtMYB31_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB34_II/AtMYB34_II/AthaMYB XX ID AtMYB34_II:AtMYB34_II:AthaMYB XX NA AtMYB34_II XX DE AtMYB34_II XX OS Arabidopsis thaliana XX BF 10343; XX P0 A C G T 01 2 0 0 0 A 02 0 0 2 0 G 03 0 0 0 2 T 04 1 0 1 0 r 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A XX BS 35090; BS 35091; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB34_II:AtMYB34_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB35_II/AtMYB35_II/AthaMYB XX ID AtMYB35_II:AtMYB35_II:AthaMYB XX NA AtMYB35_II XX DE AtMYB35_II XX OS Arabidopsis thaliana XX BF 10344; BF 10364; XX P0 A C G T 01 1 0 1 0 r 02 0 1 1 0 s 03 0 0 0 2 T 04 1 0 0 1 w 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35090; BS 35094; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB35_II:AtMYB35_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB36_II/AtMYB36_II/AthaMYB XX ID AtMYB36_II:AtMYB36_II:AthaMYB XX NA AtMYB36_II XX DE AtMYB36_II XX OS Arabidopsis thaliana XX BF 10345; BF 10365; BF 10379; XX P0 A C G T 01 0 0 3 0 G 02 0 1.50 0 1.50 y 03 1 0 0 2 w 04 1 0 1 1 d 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35089; BS 35094; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB36_II:AtMYB36_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB37_I/AtMYB37_I/AthaMYB XX ID AtMYB37_I:AtMYB37_I:AthaMYB XX NA AtMYB37_I XX DE AtMYB37_I XX OS Arabidopsis thaliana XX BF 10346; BF 10399; XX P0 A C G T 01 2 0 1 2 w 02 1 1 1 2 t 03 1 3 0 1 c 04 3 0 1 1 a 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 2 0 3 0 r XX BS 35088; BS 35092; BS 35097; BS 35099; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB37_I:AtMYB37_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB39_II/AtMYB39_II/AthaMYB XX ID AtMYB39_II:AtMYB39_II:AthaMYB XX NA AtMYB39_II XX DE AtMYB39_II XX OS Arabidopsis thaliana XX BF 10347; XX P0 A C G T 01 0 0 3 0 G 02 0 1.50 1.50 0 s 03 0 0 0 3 T 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 1 2 k 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35094; BS 35095; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB39_II:AtMYB39_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB40_II/AtMYB40_II/AthaMYB XX ID AtMYB40_II:AtMYB40_II:AthaMYB XX NA AtMYB40_II XX DE AtMYB40_II XX OS Arabidopsis thaliana XX BF 10349; BF 10352; BF 10356; BF 10390; BF 10404; XX P0 A C G T 01 3 0 3 0 r 02 0 1.71 2.57 1.71 b 03 1 0 0 5 T 04 3 0 2 1 r 05 0 0 6 0 G 06 0 0 0 6 T 07 0 0 0 6 T 08 4 0 2 0 r XX BS 35089; BS 35090; BS 35091; BS 35094; BS 35098; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB40_II:AtMYB40_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB41_II/AtMYB41_II/AthaMYB XX ID AtMYB41_II:AtMYB41_II:AthaMYB XX NA AtMYB41_II XX DE AtMYB41_II XX OS Arabidopsis thaliana XX BF 10350; XX P0 A C G T 01 2.50 0 2.50 0 r 02 0 1.25 2.50 1.25 b 03 1 0 0 4 T 04 2 0 2 1 r 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 4 0 1 0 A XX BS 35089; BS 35090; BS 35091; BS 35094; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB41_II:AtMYB41_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB42_II/AtMYB42_II/AthaMYB XX ID AtMYB42_II:AtMYB42_II:AthaMYB XX NA AtMYB42_II XX DE AtMYB42_II XX OS Arabidopsis thaliana XX BF 10351; XX P0 A C G T 01 3 0 5 0 r 02 0 1.14 5.71 1.14 G 03 1 0 0 7 T 04 4 0 2 2 d 05 0 0 8 0 G 06 0 0 2 6 K 07 0 0 0 8 T 08 4 0 4 0 r XX BS 35089; BS 35090; BS 35091; BS 35094; BS 35095; BS 35096; BS 35098; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB42_II:AtMYB42_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB44_II/AtMYB44_II/AthaMYB XX ID AtMYB44_II:AtMYB44_II:AthaMYB XX NA AtMYB44_II XX DE AtMYB44_II XX OS Arabidopsis thaliana XX BF 10353; XX P0 A C G T 01 1 0 4 0 G 02 1.25 0 1.25 2.50 d 03 1 1 0 3 t 04 4 0 1 0 A 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 3 0 2 0 r XX BS 35089; BS 35090; BS 35093; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB44_II:AtMYB44_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB45_II/AtMYB45_II/AthaMYB XX ID AtMYB45_II:AtMYB45_II:AthaMYB XX NA AtMYB45_II XX DE AtMYB45_II XX OS Arabidopsis thaliana XX BF 10354; XX P0 A C G T 01 1 0 4 0 G 02 0 1 2 2 k 03 0 0 0 5 T 04 4 0 0 1 A 05 0 0 5 0 G 06 0 0 1 4 T 07 0 0 0 5 T 08 2 0 3 0 r XX BS 35090; BS 35094; BS 35095; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB45_II:AtMYB45_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB46_I/AtMYB46_I/AthaMYB XX ID AtMYB46_I:AtMYB46_I:AthaMYB XX NA AtMYB46_I XX DE AtMYB46_I XX OS Arabidopsis thaliana XX BF 10355; XX P0 A C G T 01 0 0 1 2 k 02 1 0 1 1 d 03 0 3 0 0 C 04 1 0 1 1 d 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35097; BS 35099; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB46_I:AtMYB46_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB46_II/AtMYB46_II/AthaMYB XX ID AtMYB46_II:AtMYB46_II:AthaMYB XX NA AtMYB46_II XX DE AtMYB46_II XX OS Arabidopsis thaliana XX BF 10355; XX P0 A C G T 01 1 0 3 0 R 02 0 0 3 1 K 03 0 0 0 4 T 04 3 0 0 1 W 05 0 0 4 0 G 06 0 0 2 2 k 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35090; BS 35095; BS 35096; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB46_II:AtMYB46_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB49_II/AtMYB49_II/AthaMYB XX ID AtMYB49_II:AtMYB49_II:AthaMYB XX NA AtMYB49_II XX DE AtMYB49_II XX OS Arabidopsis thaliana XX BF 10358; XX P0 A C G T 01 2 0 5 0 R 02 0 1 4 2 k 03 1 0 0 6 T 04 4 0 2 1 r 05 0 0 7 0 G 06 0 0 1 6 T 07 0 0 0 7 T 08 4 0 3 0 r XX BS 35089; BS 35090; BS 35091; BS 35094; BS 35095; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB49_II:AtMYB49_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB4_I/AtMYB4_I/AthaMYB XX ID AtMYB4_I:AtMYB4_I:AthaMYB XX NA AtMYB4_I XX DE AtMYB4_I XX OS Arabidopsis thaliana XX BF 10348; XX P0 A C G T 01 1 0 1 0 r 02 0 1 0 1 y 03 1 1 0 0 m 04 2 0 0 0 A 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A XX BS 35088; BS 35097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB4_I:AtMYB4_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB50_II/AtMYB50_II/AthaMYB XX ID AtMYB50_II:AtMYB50_II:AthaMYB XX NA AtMYB50_II XX DE AtMYB50_II XX OS Arabidopsis thaliana XX BF 10360; BF 10398; XX P0 A C G T 01 0 0 6 0 G 02 0 1.20 2.40 2.40 k 03 1 0 0 5 T 04 3 0 1 2 w 05 0 0 6 0 G 06 0 0 2 4 k 07 0 0 0 6 T 08 2 0 4 0 r XX BS 35089; BS 35094; BS 35095; BS 35096; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB50_II:AtMYB50_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB51_II/AtMYB51_II/AthaMYB XX ID AtMYB51_II:AtMYB51_II:AthaMYB XX NA AtMYB51_II XX DE AtMYB51_II XX OS Arabidopsis thaliana XX BF 10361; XX P0 A C G T 01 2 0 0 0 A 02 0 0 2 0 G 03 0 0 0 2 T 04 2 0 0 0 A 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A XX BS 35090; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB51_II:AtMYB51_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB52_II/AtMYB52_II/AthaMYB XX ID AtMYB52_II:AtMYB52_II:AthaMYB XX NA AtMYB52_II XX DE AtMYB52_II XX OS Arabidopsis thaliana XX BF 10362; XX P0 A C G T 01 3 0 1 0 R 02 0 1 3 0 S 03 1 0 0 3 W 04 1 0 2 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 3 0 1 0 R XX BS 35089; BS 35090; BS 35091; BS 35094; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB52_II:AtMYB52_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB53_II/AtMYB53_II/AthaMYB XX ID AtMYB53_II:AtMYB53_II:AthaMYB XX NA AtMYB53_II XX DE AtMYB53_II XX OS Arabidopsis thaliana XX BF 10363; BF 10371; XX P0 A C G T 01 0 0 4 0 G 02 0 0 2 2 k 03 0 0 0 4 T 04 3 0 0 1 W 05 0 0 4 0 G 06 0 0 2 2 k 07 0 0 0 4 T 08 1 0 3 0 R XX BS 35095; BS 35096; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB53_II:AtMYB53_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB58_I/AtMYB58_I/AthaMYB XX ID AtMYB58_I:AtMYB58_I:AthaMYB XX NA AtMYB58_I XX DE AtMYB58_I XX OS Arabidopsis thaliana XX BF 10367; XX P0 A C G T 01 1 0 1 0 r 02 1 0 0 1 w 03 1 1 0 0 m 04 2 0 0 0 A 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A XX BS 35087; BS 35097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB58_I:AtMYB58_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB58_II/AtMYB58_II/AthaMYB XX ID AtMYB58_II:AtMYB58_II:AthaMYB XX NA AtMYB58_II XX DE AtMYB58_II XX OS Arabidopsis thaliana XX BF 10367; XX P0 A C G T 01 0 0 3 0 G 02 0 0 2 1 k 03 0 0 0 3 T 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 2 1 k 07 0 0 0 3 T 08 0 0 3 0 G XX BS 35095; BS 35096; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB58_II:AtMYB58_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB59_II/AtMYB59_II/AthaMYB XX ID AtMYB59_II:AtMYB59_II:AthaMYB XX NA AtMYB59_II XX DE AtMYB59_II XX OS Arabidopsis thaliana XX BF 10368; BF 10400; XX P0 A C G T 01 2 0 2 0 r 02 0 1 2 1 b 03 0 0 0 4 T 04 2 0 1 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35090; BS 35091; BS 35094; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB59_II:AtMYB59_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB5_II/AtMYB5_II/AthaMYB XX ID AtMYB5_II:AtMYB5_II:AthaMYB XX NA AtMYB5_II XX DE AtMYB5_II XX OS Arabidopsis thaliana XX BF 10359; XX P0 A C G T 01 1 0 3 0 R 02 0 1.33 1.33 1.33 b 03 1 0 0 3 W 04 2 0 1 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 3 0 1 0 R XX BS 35089; BS 35090; BS 35094; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB5_II:AtMYB5_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB60_I/AtMYB60_I/AthaMYB XX ID AtMYB60_I:AtMYB60_I:AthaMYB XX NA AtMYB60_I XX DE AtMYB60_I XX OS Arabidopsis thaliana XX BF 10370; BF 10383; BF 10380; BF 10406; XX P0 A C G T 01 1 0 1 2 d 02 2 0 1 1 d 03 1 3 0 0 M 04 2 0 1 1 d 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35087; BS 35097; BS 35099; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB60_I:AtMYB60_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB63_I/AtMYB63_I/AthaMYB XX ID AtMYB63_I:AtMYB63_I:AthaMYB XX NA AtMYB63_I XX DE AtMYB63_I XX OS Arabidopsis thaliana XX BF 10373; XX P0 A C G T 01 3 0 1 0 R 02 1 1 0 2 h 03 2 1 0 1 h 04 4 0 0 0 A 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 3 0 1 0 R XX BS 35087; BS 35088; BS 35092; BS 35097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB63_I:AtMYB63_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB63_II/AtMYB63_II/AthaMYB XX ID AtMYB63_II:AtMYB63_II:AthaMYB XX NA AtMYB63_II XX DE AtMYB63_II XX OS Arabidopsis thaliana XX BF 10373; XX P0 A C G T 01 0 0 4 0 G 02 0 1 2 1 b 03 0 0 0 4 T 04 2 0 0 2 w 05 0 0 4 0 G 06 0 0 2 2 k 07 0 0 0 4 T 08 1 0 3 0 R XX BS 35094; BS 35095; BS 35096; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB63_II:AtMYB63_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB65_I/AtMYB65_I/AthaMYB XX ID AtMYB65_I:AtMYB65_I:AthaMYB XX NA AtMYB65_I XX DE AtMYB65_I XX OS Arabidopsis thaliana XX BF 10375; XX P0 A C G T 01 0 0 1 1 k 02 0 0 1 1 k 03 0 2 0 0 C 04 1 0 1 0 r 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35097; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB65_I:AtMYB65_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB66_II/AtMYB66_II/AthaMYB XX ID AtMYB66_II:AtMYB66_II:AthaMYB XX NA AtMYB66_II XX DE AtMYB66_II XX OS Arabidopsis thaliana XX BF 10376; XX P0 A C G T 01 2.50 0 2.50 0 r 02 0 0 2.50 2.50 k 03 1 0 0 4 T 04 3 0 2 0 r 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 4 0 1 0 A XX BS 35089; BS 35090; BS 35091; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB66_II:AtMYB66_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB67_II/AtMYB67_II/AthaMYB XX ID AtMYB67_II:AtMYB67_II:AthaMYB XX NA AtMYB67_II XX DE AtMYB67_II XX OS Arabidopsis thaliana XX BF 10377; BF 10394; XX P0 A C G T 01 3 0 4 0 r 02 0 1 3 3 k 03 1 0 0 6 T 04 4 0 2 1 r 05 0 0 7 0 G 06 0 0 0 7 T 07 0 0 0 7 T 08 5 0 2 0 R XX BS 35089; BS 35090; BS 35091; BS 35094; BS 19337; BS 35098; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB67_II:AtMYB67_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB68_II/AtMYB68_II/AthaMYB XX ID AtMYB68_II:AtMYB68_II:AthaMYB XX NA AtMYB68_II XX DE AtMYB68_II XX OS Arabidopsis thaliana XX BF 10378; XX P0 A C G T 01 1 0 1 0 r 02 0 0 2 0 G 03 0 0 0 2 T 04 2 0 0 0 A 05 0 0 2 0 G 06 0 0 1 1 k 07 0 0 0 2 T 08 1 0 1 0 r XX BS 35090; BS 35095; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB68_II:AtMYB68_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB6_II/AtMYB6_II/AthaMYB XX ID AtMYB6_II:AtMYB6_II:AthaMYB XX NA AtMYB6_II XX DE AtMYB6_II XX OS Arabidopsis thaliana XX BF 10369; XX P0 A C G T 01 1 0 2 0 r 02 0 1 1 1 b 03 0 0 0 3 T 04 1 0 1 1 d 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35091; BS 35094; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB6_II:AtMYB6_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB70_II/AtMYB70_II/AthaMYB XX ID AtMYB70_II:AtMYB70_II:AthaMYB XX NA AtMYB70_II XX DE AtMYB70_II XX OS Arabidopsis thaliana XX BF 10381; XX P0 A C G T 01 0 0 3 0 G 02 1.50 0 0 1.50 w 03 1 1 0 1 h 04 2 0 1 0 r 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35089; BS 35093; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB70_II:AtMYB70_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB72_II/AtMYB72_II/AthaMYB XX ID AtMYB72_II:AtMYB72_II:AthaMYB XX NA AtMYB72_II XX DE AtMYB72_II XX OS Arabidopsis thaliana XX BF 10383; XX P0 A C G T 01 2 0 3 0 r 02 0 1 3 1 g 03 0 0 0 5 T 04 3 0 1 1 a 05 0 0 5 0 G 06 0 0 1 4 T 07 0 0 0 5 T 08 2 0 3 0 r XX BS 35090; BS 35091; BS 35094; BS 35095; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB72_II:AtMYB72_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB73_II/AtMYB73_II/AthaMYB XX ID AtMYB73_II:AtMYB73_II:AthaMYB XX NA AtMYB73_II XX DE AtMYB73_II XX OS Arabidopsis thaliana XX BF 10384; XX P0 A C G T 01 1 0 3 0 R 02 1 0 1 2 d 03 0 1 0 3 Y 04 4 0 0 0 A 05 0 0 4 0 G 06 0 0 0 4 T 07 0 0 0 4 T 08 2 0 2 0 r XX BS 35090; BS 35093; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB73_II:AtMYB73_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB74_II/AtMYB74_II/AthaMYB XX ID AtMYB74_II:AtMYB74_II:AthaMYB XX NA AtMYB74_II XX DE AtMYB74_II XX OS Arabidopsis thaliana XX BF 10385; XX P0 A C G T 01 1.50 0 1.50 0 r 02 0 1.50 1.50 0 s 03 1 0 0 2 w 04 0 0 2 1 k 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35089; BS 35091; BS 35094; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB74_II:AtMYB74_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB76_I/AtMYB76_I/AthaMYB XX ID AtMYB76_I:AtMYB76_I:AthaMYB XX NA AtMYB76_I XX DE AtMYB76_I XX OS Arabidopsis thaliana XX BF 10387; BF 10392; BF 10391; XX P0 A C G T 01 1 0 1 1 d 02 2 0 0 1 w 03 1 2 0 0 m 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35087; BS 35097; BS 35099; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB76_I:AtMYB76_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB76_II/AtMYB76_II/AthaMYB XX ID AtMYB76_II:AtMYB76_II:AthaMYB XX NA AtMYB76_II XX DE AtMYB76_II XX OS Arabidopsis thaliana XX BF 10387; XX P0 A C G T 01 1 0 2 0 r 02 0 0 3 0 G 03 0 0 0 3 T 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 2 1 k 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35090; BS 35095; BS 35096; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB76_II:AtMYB76_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB77_II/AtMYB77_II/AthaMYB XX ID AtMYB77_II:AtMYB77_II:AthaMYB XX NA AtMYB77_II XX DE AtMYB77_II XX OS Arabidopsis thaliana XX BF 10388; XX P0 A C G T 01 2 0 3 0 r 02 1.67 0 1.67 1.67 d 03 1 1 0 3 t 04 4 0 1 0 A 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 4 0 1 0 A XX BS 35089; BS 35090; BS 35093; BS 19337; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB77_II:AtMYB77_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB78_II/AtMYB78_II/AthaMYB XX ID AtMYB78_II:AtMYB78_II:AthaMYB XX NA AtMYB78_II XX DE AtMYB78_II XX OS Arabidopsis thaliana XX BF 10389; BF 10393; BF 10395; XX P0 A C G T 01 0 0 3 0 G 02 0 1.50 0 1.50 y 03 1 0 0 2 w 04 1 0 1 1 d 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35089; BS 35094; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB78_II:AtMYB78_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB80_II/AtMYB80_II/AthaMYB XX ID AtMYB80_II:AtMYB80_II:AthaMYB XX NA AtMYB80_II XX DE AtMYB80_II XX OS Arabidopsis thaliana XX BF 10392; XX P0 A C G T 01 1 0 5 0 G 02 0 1 3 2 k 03 0 0 0 6 T 04 4 0 0 2 w 05 0 0 6 0 G 06 0 0 2 4 k 07 0 0 0 6 T 08 2 0 4 0 r XX BS 35090; BS 35094; BS 35095; BS 35096; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB80_II:AtMYB80_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB84_I/AtMYB84_I/AthaMYB XX ID AtMYB84_I:AtMYB84_I:AthaMYB XX NA AtMYB84_I XX DE AtMYB84_I XX OS Arabidopsis thaliana XX BF 10396; XX P0 A C G T 01 1 0 1 1 d 02 0 1 1 1 b 03 1 2 0 0 m 04 2 0 1 0 r 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 2 0 1 0 r XX BS 35088; BS 35097; BS 35101; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB84_I:AtMYB84_I:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB84_II/AtMYB84_II/AthaMYB XX ID AtMYB84_II:AtMYB84_II:AthaMYB XX NA AtMYB84_II XX DE AtMYB84_II XX OS Arabidopsis thaliana XX BF 10396; XX P0 A C G T 01 0 0 0 1 T 02 1 0 0 0 A 03 0 0 1 0 G 04 0 0 0 1 T 05 0 0 0 1 T 06 1 0 0 0 A XX BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB84_II:AtMYB84_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB85_II/AtMYB85_II/AthaMYB XX ID AtMYB85_II:AtMYB85_II:AthaMYB XX NA AtMYB85_II XX DE AtMYB85_II XX OS Arabidopsis thaliana XX BF 10397; XX P0 A C G T 01 1 0 2 0 r 02 0 1 1 1 b 03 0 0 0 3 T 04 2 0 0 1 w 05 0 0 3 0 G 06 0 0 0 3 T 07 0 0 0 3 T 08 1 0 2 0 r XX BS 35090; BS 35094; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB85_II:AtMYB85_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB87_II/AtMYB87_II/AthaMYB XX ID AtMYB87_II:AtMYB87_II:AthaMYB XX NA AtMYB87_II XX DE AtMYB87_II XX OS Arabidopsis thaliana XX BF 10399; XX P0 A C G T 01 1 0 1 0 r 02 0 0 1 1 k 03 0 0 0 2 T 04 2 0 0 0 A 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A XX BS 35090; BS 19337; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB87_II:AtMYB87_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB89_II/AtMYB89_II/AthaMYB XX ID AtMYB89_II:AtMYB89_II:AthaMYB XX NA AtMYB89_II XX DE AtMYB89_II XX OS Arabidopsis thaliana XX BF 10401; XX P0 A C G T 01 1 0 4 0 G 02 0 1.25 2.50 1.25 b 03 1 0 0 4 T 04 1 0 2 2 k 05 0 0 5 0 G 06 0 0 1 4 T 07 0 0 0 5 T 08 2 0 3 0 r XX BS 35089; BS 35091; BS 35094; BS 35096; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB89_II:AtMYB89_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB8_II/AtMYB8_II/AthaMYB XX ID AtMYB8_II:AtMYB8_II:AthaMYB XX NA AtMYB8_II XX DE AtMYB8_II XX OS Arabidopsis thaliana XX BF 10391; XX P0 A C G T 01 2.50 0 2.50 0 r 02 0 1.25 2.50 1.25 b 03 1 0 0 4 T 04 2 0 2 1 r 05 0 0 5 0 G 06 0 0 0 5 T 07 0 0 0 5 T 08 3 0 2 0 r XX BS 35089; BS 35090; BS 35091; BS 35094; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB8_II:AtMYB8_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB93_II/AtMYB93_II/AthaMYB XX ID AtMYB93_II:AtMYB93_II:AthaMYB XX NA AtMYB93_II XX DE AtMYB93_II XX OS Arabidopsis thaliana XX BF 10405; XX P0 A C G T 01 0 0 1 0 G 02 0 0 1 0 G 03 0 0 0 1 T 04 0 0 0 1 T 05 0 0 1 0 G 06 0 0 1 0 G 07 0 0 0 1 T 08 0 0 1 0 G XX BS 35096; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB93_II:AtMYB93_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB94_II/AtMYB94_II/AthaMYB XX ID AtMYB94_II:AtMYB94_II:AthaMYB XX NA AtMYB94_II XX DE AtMYB94_II XX OS Arabidopsis thaliana XX BF 10406; BF 10408; XX P0 A C G T 01 0 0 5 0 G 02 1 1 1 2 t 03 0 1 0 4 T 04 4 0 0 1 A 05 0 0 5 0 G 06 0 0 1 4 T 07 0 0 0 5 T 08 1 0 4 0 G XX BS 35093; BS 35094; BS 35095; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB94_II:AtMYB94_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB95_II/AtMYB95_II/AthaMYB XX ID AtMYB95_II:AtMYB95_II:AthaMYB XX NA AtMYB95_II XX DE AtMYB95_II XX OS Arabidopsis thaliana XX BF 10407; XX P0 A C G T 01 2 0 5 0 R 02 0 1 4 2 k 03 1 0 0 6 T 04 3 0 2 2 d 05 0 0 7 0 G 06 0 0 1 6 T 07 0 0 0 7 T 08 4 0 3 0 r XX BS 35089; BS 35090; BS 35091; BS 35094; BS 35096; BS 19337; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB95_II:AtMYB95_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB99_II/AtMYB99_II/AthaMYB XX ID AtMYB99_II:AtMYB99_II:AthaMYB XX NA AtMYB99_II XX DE AtMYB99_II XX OS Arabidopsis thaliana XX BF 10410; XX P0 A C G T 01 2 0 4 0 r 02 0 1 4 1 g 03 0 0 0 6 T 04 3 0 1 2 w 05 0 0 6 0 G 06 0 0 2 4 k 07 0 0 0 6 T 08 2 0 4 0 r XX BS 35090; BS 35091; BS 35094; BS 35095; BS 35096; BS 35098; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB99_II:AtMYB99_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB9_II/AtMYB9_II/AthaMYB XX ID AtMYB9_II:AtMYB9_II:AthaMYB XX NA AtMYB9_II XX DE AtMYB9_II XX OS Arabidopsis thaliana XX BF 10402; XX P0 A C G T 01 2 0 4 0 r 02 0 2 4 0 s 03 1 0 0 5 T 04 3 0 1 2 w 05 0 0 6 0 G 06 0 0 2 4 k 07 0 0 0 6 T 08 3 0 3 0 r XX BS 35089; BS 35090; BS 35094; BS 35095; BS 35096; BS 35100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB9_II:AtMYB9_II:AthaMYB XX RN [1]; RX PUBMED: 26484765 RL Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK19363.1/M0004_1.02/CISBP XX ID PK19363.1:M0004_1.02:CISBP XX NA PK19363.1 XX DE PK19363.1 XX OS Cannabis sativa XX BF 10413; XX P0 A C G T 01 15 72 7 6 C 02 3 1 95 1 G 03 2 87 11 0 C 04 2 97 1 0 C 05 0 1 99 0 G 06 6 62 14 18 c 07 16 77 1 6 C 08 49 7 30 14 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK19363.1:M0004_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ORA59/M0005_1.02/CISBP XX ID ORA59:M0005_1.02:CISBP XX NA ORA59 XX DE ORA59 XX OS Arabidopsis thaliana XX BF 4822; XX P0 A C G T 01 35 46 19 0 m 02 0 0 100 0 G 03 0 100 0 0 C 04 12 88 0 0 C 05 2 1 97 0 G 06 0 95 5 0 C 07 0 100 0 0 C 08 24 11 48 17 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ORA59:M0005_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WIN1/M0006_1.02/CISBP XX ID WIN1:M0006_1.02:CISBP XX NA WIN1 XX DE WIN1 XX OS Arabidopsis thaliana XX BF 10414; XX P0 A C G T 01 25 39 27 9 s 02 14 72 13 1 C 03 39 0 61 0 r 04 0 79 19 2 C 05 0 96 0 4 C 06 20 1 71 8 G 07 16 68 8 8 c 08 35 35 16 14 m 09 25 16 43 16 r 10 18 24 17 41 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WIN1:M0006_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G22985/M0007_1.02/CISBP XX ID AT1G22985:M0007_1.02:CISBP XX NA AT1G22985 XX DE AT1G22985 XX OS Arabidopsis thaliana XX BF 2584; XX P0 A C G T 01 19 29 32 20 s 02 20 46 18 16 c 03 2 0 98 0 G 04 6 83 9 2 C 05 10 68 8 14 C 06 18 0 82 0 G 07 14 42 21 23 c 08 22 40 19 19 c 09 35 21 23 21 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G22985:M0007_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TEM1/M0008_1.02/CISBP XX ID TEM1:M0008_1.02:CISBP XX NA TEM1 XX DE TEM1 XX OS Arabidopsis thaliana XX BF 5566; XX P0 A C G T 01 27 0 13 60 w 02 76 24 0 0 A 03 0 0 0 100 T 04 0 0 100 0 G 05 0 0 0 100 T 06 0 11 2 87 T 07 0 0 91 9 G 08 0 68 10 22 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TEM1:M0008_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF11/M0009_1.02/CISBP XX ID ERF11:M0009_1.02:CISBP XX NA ERF11 XX DE ERF11 XX OS Arabidopsis thaliana XX BF 10415; XX P0 A C G T 01 21 30 32 17 s 02 21 50 12 17 c 03 11 0 89 0 G 04 2 83 6 9 C 05 15 70 5 10 C 06 13 1 83 3 G 07 19 39 15 27 y 08 26 49 8 17 m 09 43 16 18 23 a 10 28 20 20 32 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF11:M0009_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.6/M0010_1.02/CISBP XX ID RAP2.6:M0010_1.02:CISBP XX NA RAP2.6 XX DE RAP2.6 XX OS Arabidopsis thaliana XX BF 5568; XX P0 A C G T 01 18 26 32 24 s 02 11 38 18 33 y 03 5 0 95 0 G 04 4 78 5 13 C 05 4 62 11 23 c 06 14 9 70 7 G 07 18 19 36 27 k 08 19 49 10 22 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.6:M0010_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF3/M0011_1.02/CISBP XX ID ERF3:M0011_1.02:CISBP XX NA ERF3 XX DE ERF3 XX OS Arabidopsis thaliana XX BF 7506; XX P0 A C G T 01 8 76 8 8 C 02 1 0 99 0 G 03 0 89 11 0 C 04 0 99 1 0 C 05 1 0 99 0 G 06 6 64 19 11 c 07 8 90 0 2 C 08 58 2 28 12 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF3:M0011_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF-8/M0012_1.02/CISBP XX ID ATERF-8:M0012_1.02:CISBP XX NA ATERF-8 XX DE ATERF-8 XX OS Arabidopsis thaliana XX BF 10416; XX P0 A C G T 01 20 57 10 13 c 02 4 0 96 0 G 03 1 91 6 2 C 04 11 81 3 5 C 05 7 5 84 4 G 06 15 46 15 24 c 07 20 61 5 14 c 08 45 18 18 19 a 09 27 21 18 34 w 10 29 21 19 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF-8:M0012_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TEM2/M0013_1.02/CISBP XX ID TEM2:M0013_1.02:CISBP XX NA TEM2 XX DE TEM2 XX OS Arabidopsis thaliana XX BF 10417; XX P0 A C G T 01 19 0 25 56 k 02 86 14 0 0 A 03 0 0 0 100 T 04 0 0 100 0 G 05 0 0 0 100 T 06 0 9 0 91 T 07 0 0 100 0 G 08 1 71 7 21 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TEM2:M0013_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ORA47/M0014_1.02/CISBP XX ID ORA47:M0014_1.02:CISBP XX NA ORA47 XX DE ORA47 XX OS Arabidopsis thaliana XX BF 8889; XX P0 A C G T 01 17 40 16 27 y 02 49 1 40 10 r 03 4 90 3 3 C 04 3 94 0 3 C 05 6 0 91 3 G 06 35 19 19 27 w 07 8 81 4 7 C 08 23 49 10 18 c 09 37 19 20 24 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ORA47:M0014_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G75490/M0015_1.02/CISBP XX ID AT1G75490:M0015_1.02:CISBP XX NA AT1G75490 XX DE AT1G75490 XX OS Arabidopsis thaliana XX BF 10418; XX P0 A C G T 01 21 28 27 24 s 02 22 42 18 18 c 03 61 0 39 0 r 04 2 95 3 0 C 05 3 91 2 4 C 06 6 0 86 8 G 07 35 31 13 21 m 08 22 38 15 25 y 09 32 24 16 28 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G75490:M0015_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.4/M0016_1.02/CISBP XX ID RAP2.4:M0016_1.02:CISBP XX NA RAP2.4 XX DE RAP2.4 XX OS Arabidopsis thaliana XX BF 10419; XX P0 A C G T 01 18 55 13 14 c 02 58 0 42 0 r 03 0 93 7 0 C 04 0 97 0 3 C 05 9 1 79 11 G 06 50 24 8 18 a 07 10 82 0 8 C 08 27 55 5 13 m 09 47 14 16 23 a 10 27 24 19 30 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.4:M0016_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF15/M0017_1.02/CISBP XX ID ATERF15:M0017_1.02:CISBP XX NA ATERF15 XX DE ATERF15 XX OS Arabidopsis thaliana XX BF 4982; XX P0 A C G T 01 20 50 13 17 c 02 3 5 89 3 G 03 3 61 33 3 s 04 3 89 5 3 C 05 8 3 84 5 G 06 2 24 71 3 G 07 3 92 2 3 C 08 10 59 17 14 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF15:M0017_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G33710/M0018_1.02/CISBP XX ID AT2G33710:M0018_1.02:CISBP XX NA AT2G33710 XX DE AT2G33710 XX OS Arabidopsis thaliana XX BF 10420; XX P0 A C G T 01 19 24 39 18 g 02 10 43 35 12 s 03 22 61 12 5 c 04 2 0 91 7 G 05 0 100 0 0 C 06 4 95 1 0 C 07 4 3 90 3 G 08 17 52 10 21 c 09 24 66 4 6 c 10 48 13 24 15 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G33710:M0018_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HRD/M0019_1.02/CISBP XX ID HRD:M0019_1.02:CISBP XX NA HRD XX DE HRD XX OS Arabidopsis thaliana XX BF 10421; XX P0 A C G T 01 19 30 23 28 y 02 17 23 19 41 t 03 31 3 58 8 r 04 0 89 2 9 C 05 4 88 5 3 C 06 3 4 90 3 G 07 54 24 8 14 a 08 9 71 10 10 C 09 42 16 22 20 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HRD:M0019_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF13/M0020_1.02/CISBP XX ID ATERF13:M0020_1.02:CISBP XX NA ATERF13 XX DE ATERF13 XX OS Arabidopsis thaliana XX BF 2589; XX P0 A C G T 01 22 48 28 2 s 02 0 5 95 0 G 03 2 95 3 0 C 04 0 98 2 0 C 05 0 2 98 0 G 06 10 64 15 11 c 07 0 100 0 0 C 08 46 10 28 16 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF13:M0020_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.2/M0021_1.02/CISBP XX ID RAP2.2:M0021_1.02:CISBP XX NA RAP2.2 XX DE RAP2.2 XX OS Arabidopsis thaliana XX BF 10422; XX P0 A C G T 01 25 24 22 29 w 02 24 22 26 28 k 03 22 7 58 13 g 04 11 50 24 15 c 05 1 66 1 32 y 06 21 0 78 1 G 07 15 33 28 24 s 08 24 34 23 19 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.2:M0021_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF-4/M0022_1.02/CISBP XX ID ATERF-4:M0022_1.02:CISBP XX NA ATERF-4 XX DE ATERF-4 XX OS Arabidopsis thaliana XX BF 7507; XX P0 A C G T 01 17 52 22 9 c 02 6 73 12 9 C 03 2 2 95 1 G 04 1 90 8 1 C 05 1 98 1 0 C 06 1 0 99 0 G 07 6 66 13 15 c 08 12 80 4 4 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF-4:M0022_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF-7/M0023_1.02/CISBP XX ID ATERF-7:M0023_1.02:CISBP XX NA ATERF-7 XX DE ATERF-7 XX OS Arabidopsis thaliana XX BF 2877; XX P0 A C G T 01 26 44 14 16 m 02 9 1 87 3 G 03 5 87 8 0 C 04 13 77 4 6 C 05 9 2 88 1 G 06 15 45 13 27 y 07 21 59 7 13 c 08 42 17 21 20 a 09 28 21 19 32 w 10 28 21 20 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF-7:M0023_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G23230/M0024_1.02/CISBP XX ID AT3G23230:M0024_1.02:CISBP XX NA AT3G23230 XX DE AT3G23230 XX OS Arabidopsis thaliana XX BF 10423; XX P0 A C G T 01 21 32 27 20 s 02 25 36 22 17 c 03 10 6 80 4 G 04 2 75 17 6 C 05 15 77 1 7 C 06 19 4 76 1 G 07 19 45 17 19 c 08 12 68 10 10 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G23230:M0024_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF1/M0025_1.02/CISBP XX ID ERF1:M0025_1.02:CISBP XX NA ERF1 XX DE ERF1 XX OS Arabidopsis thaliana XX BF 4198; XX P0 A C G T 01 17 38 27 18 s 02 30 50 10 10 m 03 0 0 100 0 G 04 0 100 0 0 C 05 0 100 0 0 C 06 0 0 100 0 G 07 0 100 0 0 C 08 0 100 0 0 C 09 36 7 49 8 r 10 15 26 24 35 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF1:M0025_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G16750/M0026_1.02/CISBP XX ID AT4G16750:M0026_1.02:CISBP XX NA AT4G16750 XX DE AT4G16750 XX OS Arabidopsis thaliana XX BF 2592; XX P0 A C G T 01 25 24 27 24 r 02 17 24 12 47 t 03 4 1 92 3 G 04 11 9 14 66 t 05 0 99 0 1 C 06 1 0 98 1 G 07 2 0 97 1 G 08 2 42 4 52 y 09 25 17 39 19 g 10 26 22 32 20 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G16750:M0026_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF6/M0027_1.02/CISBP XX ID ATERF6:M0027_1.02:CISBP XX NA ATERF6 XX DE ATERF6 XX OS Arabidopsis thaliana XX BF 5590; XX P0 A C G T 01 29 35 18 18 m 02 7 22 17 54 t 03 0 0 100 0 G 04 0 100 0 0 C 05 0 100 0 0 C 06 0 0 100 0 G 07 0 9 91 0 G 08 0 100 0 0 C 09 16 16 53 15 g 10 17 28 26 29 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF6:M0027_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF-1/M0028_1.02/CISBP XX ID ATERF-1:M0028_1.02:CISBP XX NA ATERF-1 XX DE ATERF-1 XX OS Arabidopsis thaliana XX BF 7505; XX P0 A C G T 01 22 32 26 20 s 02 30 47 11 12 m 03 5 0 95 0 G 04 6 83 5 6 C 05 13 78 3 6 C 06 21 9 62 8 g 07 24 35 13 28 y 08 13 68 7 12 C 09 31 32 14 23 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF-1:M0028_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF2/M0029_1.02/CISBP XX ID CRF2:M0029_1.02:CISBP XX NA CRF2 XX DE CRF2 XX OS Arabidopsis thaliana XX BF 10424; XX P0 A C G T 01 4 48 35 13 s 02 11 78 8 3 C 03 0 0 100 0 G 04 0 98 2 0 C 05 0 100 0 0 C 06 0 0 100 0 G 07 2 93 0 5 C 08 12 73 6 9 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF2:M0029_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FTQ4/M0030_1.02/CISBP XX ID FTQ4:M0030_1.02:CISBP XX NA FTQ4 XX DE FTQ4 XX OS Arabidopsis thaliana XX BF 7500; XX P0 A C G T 01 100 0 0 0 A 02 0 0 1 99 T 03 1 0 99 0 G 04 0 1 0 99 T 05 0 99 0 1 C 06 0 0 99 1 G 07 0 0 99 1 G 08 0 50 0 50 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FTQ4:M0030_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATCBF3/M0031_1.02/CISBP XX ID ATCBF3:M0031_1.02:CISBP XX NA ATCBF3 XX DE ATCBF3 XX OS Arabidopsis thaliana XX BF 7498; XX P0 A C G T 01 22 22 25 31 t 02 51 14 17 18 a 03 13 21 14 52 t 04 3 0 96 1 G 05 3 1 0 96 T 06 1 96 0 3 C 07 7 0 89 4 G 08 9 0 89 2 G 09 2 53 1 44 y 10 37 21 27 15 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATCBF3:M0031_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF4/M0033_1.02/CISBP XX ID CRF4:M0033_1.02:CISBP XX NA CRF4 XX DE CRF4 XX OS Arabidopsis thaliana XX BF 10425; XX P0 A C G T 01 7 33 53 7 s 02 11 77 6 6 C 03 0 0 100 0 G 04 0 97 3 0 C 05 0 100 0 0 C 06 0 1 99 0 G 07 7 76 7 10 C 08 10 79 6 5 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF4:M0033_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G32800/M0034_1.02/CISBP XX ID AT4G32800:M0034_1.02:CISBP XX NA AT4G32800 XX DE AT4G32800 XX OS Arabidopsis thaliana XX BF 2594; XX P0 A C G T 01 0 8 0 92 T 02 0 0 100 0 G 03 0 0 0 100 T 04 0 100 0 0 C 05 0 0 100 0 G 06 0 0 100 0 G 07 0 25 0 75 Y 08 20 10 60 10 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G32800:M0034_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G07580/M0035_1.02/CISBP XX ID AT5G07580:M0035_1.02:CISBP XX NA AT5G07580 XX DE AT5G07580 XX OS Arabidopsis thaliana XX BF 10426; XX P0 A C G T 01 13 28 20 39 y 02 9 10 67 14 g 03 11 35 36 18 s 04 1 68 0 31 y 05 14 6 70 10 G 06 12 19 48 21 g 07 16 48 13 23 c 08 17 32 21 30 y 09 23 26 25 26 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G07580:M0035_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Rap2.6L/M0036_1.02/CISBP XX ID Rap2.6L:M0036_1.02:CISBP XX NA Rap2.6L XX DE Rap2.6L XX OS Arabidopsis thaliana XX BF 5599; XX P0 A C G T 01 18 35 27 20 s 02 26 44 17 13 m 03 7 3 89 1 G 04 5 76 14 5 C 05 10 80 5 5 C 06 11 8 75 6 G 07 18 41 12 29 y 08 28 46 9 17 m 09 39 21 19 21 a 10 29 21 19 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Rap2.6L:M0036_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G43410/M0037_1.02/CISBP XX ID AT5G43410:M0037_1.02:CISBP XX NA AT5G43410 XX DE AT5G43410 XX OS Arabidopsis thaliana XX BF 10427; XX P0 A C G T 01 19 30 28 23 s 02 29 46 17 8 m 03 3 1 94 2 G 04 3 91 4 2 C 05 10 85 2 3 C 06 4 1 93 2 G 07 13 59 13 15 c 08 3 90 2 5 C 09 38 18 24 20 a 10 23 26 22 29 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G43410:M0037_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF2/M0038_1.02/CISBP XX ID ERF2:M0038_1.02:CISBP XX NA ERF2 XX DE ERF2 XX OS Arabidopsis thaliana XX BF 2867; XX P0 A C G T 01 26 25 21 28 h 02 23 27 27 23 s 03 29 32 24 15 m 04 13 8 72 7 G 05 9 69 14 8 C 06 17 71 4 8 C 07 16 2 77 5 G 08 18 46 15 21 c 09 12 68 9 11 C 10 34 22 23 21 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF2:M0038_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF5/M0039_1.02/CISBP XX ID ERF5:M0039_1.02:CISBP XX NA ERF5 XX DE ERF5 XX OS Arabidopsis thaliana XX BF 1971; XX P0 A C G T 01 28 27 20 25 h 02 23 27 27 23 s 03 27 37 19 17 m 04 14 6 75 5 G 05 12 61 18 9 c 06 19 67 7 7 c 07 21 12 59 8 g 08 20 35 21 24 c 09 17 60 11 12 c 10 32 30 17 21 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF5:M0039_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G51190/M0040_1.02/CISBP XX ID AT5G51190:M0040_1.02:CISBP XX NA AT5G51190 XX DE AT5G51190 XX OS Arabidopsis thaliana XX BF 10428; XX P0 A C G T 01 0 13 25 62 k 02 0 0 100 0 G 03 0 100 0 0 C 04 0 93 7 0 C 05 0 0 100 0 G 06 0 14 86 0 G 07 0 100 0 0 C 08 10 10 70 10 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G51190:M0040_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF3/M0041_1.02/CISBP XX ID CRF3:M0041_1.02:CISBP XX NA CRF3 XX DE CRF3 XX OS Arabidopsis thaliana XX BF 5608; XX P0 A C G T 01 19 31 30 20 s 02 22 48 16 14 c 03 5 1 94 0 G 04 2 88 5 5 C 05 9 78 6 7 C 06 17 10 62 11 g 07 20 42 14 24 c 08 22 46 13 19 c 09 34 24 21 21 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF3:M0041_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os02g45450/M0042_1.02/CISBP XX ID LOC_Os02g45450:M0042_1.02:CISBP XX NA LOC_Os02g45450 XX DE LOC_Os02g45450 XX OS Oryza sativa XX BF 10429; XX P0 A C G T 01 31 23 23 23 a 02 12 23 12 53 t 03 18 0 82 0 G 04 0 100 0 0 C 05 0 100 0 0 C 06 0 0 100 0 G 07 88 0 12 0 A 08 0 100 0 0 C 09 85 2 2 11 A 10 13 22 22 43 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os02g45450:M0042_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os05g41760/M0043_1.02/CISBP XX ID LOC_Os05g41760:M0043_1.02:CISBP XX NA LOC_Os05g41760 XX DE LOC_Os05g41760 XX OS Oryza sativa XX BF 10430; XX P0 A C G T 01 1 99 0 0 C 02 1 0 99 0 G 03 0 67 33 0 s 04 0 99 0 1 C 05 0 1 99 0 G 06 0 100 0 0 C 07 0 99 0 1 C 08 50 0 50 0 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os05g41760:M0043_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os08g36920/M0044_1.02/CISBP XX ID LOC_Os08g36920:M0044_1.02:CISBP XX NA LOC_Os08g36920 XX DE LOC_Os08g36920 XX OS Oryza sativa XX BF 10431; XX P0 A C G T 01 23 25 25 27 k 02 20 32 25 23 s 03 23 34 24 19 c 04 17 0 79 4 G 05 2 64 31 3 s 06 0 100 0 0 C 07 0 0 100 0 G 08 21 49 0 30 y 09 30 32 16 22 m 10 35 19 23 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os08g36920:M0044_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_fgenesh1_pg.C_4800009/M0072_1.02/CISBP XX ID estExt_fgenesh1_pg.C_4800009:M0072_1.02:CISBP XX NA estExt_fgenesh1_pg.C_4800009 XX DE estExt_fgenesh1_pg.C_4800009 XX OS Physcomitrella patens XX BF 10451; XX P0 A C G T 01 7 0 29 64 k 02 0 0 100 0 G 03 5 0 0 95 T 04 0 100 0 0 C 05 0 0 100 0 G 06 0 0 100 0 G 07 0 15 0 85 T 08 8 0 67 25 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_fgenesh1_pg.C_4800009:M0072_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_gwp_gw1.C_550163/M0073_1.02/CISBP XX ID estExt_gwp_gw1.C_550163:M0073_1.02:CISBP XX NA estExt_gwp_gw1.C_550163 XX DE estExt_gwp_gw1.C_550163 XX OS Physcomitrella patens XX BF 10452; XX P0 A C G T 01 29 18 18 35 w 02 14 8 29 49 k 03 0 0 100 0 G 04 0 0 0 100 T 05 0 100 0 0 C 06 0 0 100 0 G 07 0 0 100 0 G 08 0 8 0 92 T 09 7 7 79 7 G 10 29 25 29 17 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_gwp_gw1.C_550163:M0073_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.scaffold_1000495/M0074_1.02/CISBP XX ID fgenesh1_pg.scaffold_1000495:M0074_1.02:CISBP XX NA fgenesh1_pg.scaffold_1000495 XX DE fgenesh1_pg.scaffold_1000495 XX OS Physcomitrella patens XX BF 10453; XX P0 A C G T 01 26 27 19 28 h 02 4 4 4 88 T 03 2 2 85 11 G 04 11 1 13 75 T 05 2 94 2 2 C 06 0 9 91 0 G 07 9 0 91 0 G 08 0 0 0 100 T 09 61 7 16 16 a 10 29 21 21 29 w 11 31 23 23 23 a 12 31 23 23 23 a 13 31 23 23 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.scaffold_1000495:M0074_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC gw1.8.141.1/M0075_1.02/CISBP XX ID gw1.8.141.1:M0075_1.02:CISBP XX NA gw1.8.141.1 XX DE gw1.8.141.1 XX OS Physcomitrella patens XX BF 10454; XX P0 A C G T 01 7 7 29 57 k 02 0 0 100 0 G 03 0 0 0 100 T 04 0 100 0 0 C 05 0 0 100 0 G 06 0 0 100 0 G 07 0 22 0 78 T 08 12 0 70 18 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=gw1.8.141.1:M0075_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0100010458/M0076_1.02/CISBP XX ID 0100010458:M0076_1.02:CISBP XX NA 0100010458 XX DE 0100010458 XX OS Ostreococcus tauri XX BF 10455; XX P0 A C G T 01 18 60 14 8 c 02 0 0 100 0 G 03 0 92 8 0 C 04 0 98 2 0 C 05 0 0 100 0 G 06 2 70 22 6 C 07 0 100 0 0 C 08 59 3 32 6 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0100010458:M0076_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAV1/M0077_1.02/CISBP XX ID RAV1:M0077_1.02:CISBP XX NA RAV1 XX DE RAV1 XX OS Arabidopsis thaliana XX BF 1274; XX P0 A C G T 01 26 23 25 26 w 02 28 21 24 27 w 03 26 21 37 16 r 04 20 53 14 13 c 05 52 21 21 6 a 06 62 11 14 13 a 07 2 87 3 8 C 08 83 0 14 3 A 09 12 14 37 37 k 10 39 17 16 28 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAV1:M0077_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAV1/M0078_1.02/CISBP XX ID RAV1:M0078_1.02:CISBP XX NA RAV1 XX DE RAV1 XX OS Arabidopsis thaliana XX BF 1274; XX P0 A C G T 01 28 17 28 27 d 02 9 73 9 9 C 03 91 0 0 9 A 04 9 82 9 0 C 05 17 74 0 9 C 06 9 0 0 91 T 07 17 0 74 9 G 08 91 9 0 0 A 09 47 18 8 27 w 10 34 16 16 34 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAV1:M0078_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G51120/M0079_1.02/CISBP XX ID AT1G51120:M0079_1.02:CISBP XX NA AT1G51120 XX DE AT1G51120 XX OS Arabidopsis thaliana XX BF 2587; XX P0 A C G T 01 23 24 22 31 t 02 24 35 14 27 y 03 38 20 14 28 w 04 47 13 20 20 a 05 12 46 12 30 y 06 30 12 46 12 r 07 20 20 13 47 t 08 28 14 20 38 w 09 27 13 35 25 r 10 31 22 24 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G51120:M0079_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EDF3/M0080_1.02/CISBP XX ID EDF3:M0080_1.02:CISBP XX NA EDF3 XX DE EDF3 XX OS Arabidopsis thaliana XX BF 5583; XX P0 A C G T 01 25 21 40 14 r 02 21 53 13 13 c 03 52 19 23 6 a 04 65 10 12 13 a 05 4 87 3 6 C 06 81 0 14 5 A 07 11 13 36 40 k 08 39 17 15 29 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EDF3:M0080_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EDF3/M0081_1.02/CISBP XX ID EDF3:M0081_1.02:CISBP XX NA EDF3 XX DE EDF3 XX OS Arabidopsis thaliana XX BF 5583; XX P0 A C G T 01 43 0 57 0 r 02 0 100 0 0 C 03 100 0 0 0 A 04 100 0 0 0 A 05 0 100 0 0 C 06 100 0 0 0 A 07 0 0 34 66 k 08 85 0 0 15 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EDF3:M0081_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HMGA/M0118_1.02/CISBP XX ID HMGA:M0118_1.02:CISBP XX NA HMGA XX DE HMGA XX OS Arabidopsis thaliana XX BF 10482; XX P0 A C G T 01 24 27 26 23 s 02 21 31 25 23 s 03 35 18 30 17 r 04 33 18 25 24 r 05 41 4 20 35 w 06 71 5 0 24 A 07 89 0 4 7 A 08 45 1 4 50 w 09 21 18 10 51 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HMGA:M0118_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G17950/M0119_1.02/CISBP XX ID AT4G17950:M0119_1.02:CISBP XX NA AT4G17950 XX DE AT4G17950 XX OS Arabidopsis thaliana XX BF 10483; XX P0 A C G T 01 25 15 25 35 t 02 84 2 2 12 A 03 29 0 0 71 W 04 70 0 0 30 W 05 0 0 0 100 T 06 80 0 0 20 A 07 69 0 0 31 W 08 30 0 0 70 W 09 21 10 10 59 t 10 32 23 22 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G17950:M0119_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BRADI3G55950/M0120_1.02/CISBP XX ID BRADI3G55950:M0120_1.02:CISBP XX NA BRADI3G55950 XX DE BRADI3G55950 XX OS Brachypodium distachyon XX BF 10484; XX P0 A C G T 01 27 25 24 24 a 02 26 28 24 22 m 03 24 24 29 23 g 04 29 23 26 22 r 05 59 1 35 5 r 06 35 22 1 42 w 07 39 10 16 35 w 08 38 12 19 31 w 09 36 17 20 27 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BRADI3G55950:M0120_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BRADI5G22430/M0121_1.02/CISBP XX ID BRADI5G22430:M0121_1.02:CISBP XX NA BRADI5G22430 XX DE BRADI5G22430 XX OS Brachypodium distachyon XX BF 10485; XX P0 A C G T 01 37 14 38 11 r 02 23 27 25 25 s 03 61 6 22 11 a 04 43 11 20 26 w 05 47 5 21 27 w 06 40 10 16 34 w 07 34 20 12 34 w 08 55 7 22 16 a 09 46 4 32 18 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BRADI5G22430:M0121_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GSVIVG00033765001/M0136_1.02/CISBP XX ID GSVIVG00033765001:M0136_1.02:CISBP XX NA GSVIVG00033765001 XX DE GSVIVG00033765001 XX OS Vitis vinifera XX BF 10500; XX P0 A C G T 01 43 8 29 20 r 02 9 49 15 27 y 03 38 15 27 20 r 04 31 12 39 18 r 05 31 9 35 25 r 06 44 1 19 36 w 07 42 8 19 31 w 08 40 9 19 32 w 09 34 12 25 29 w 10 34 15 24 27 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GSVIVG00033765001:M0136_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os02g57820/M0137_1.02/CISBP XX ID LOC_Os02g57820:M0137_1.02:CISBP XX NA LOC_Os02g57820 XX DE LOC_Os02g57820 XX OS Oryza sativa XX BF 10501; XX P0 A C G T 01 42 18 20 20 a 02 39 15 18 28 w 03 41 4 20 35 w 04 44 12 5 39 w 05 81 0 8 11 A 06 51 0 7 42 w 07 34 8 6 52 w 08 31 19 15 35 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os02g57820:M0137_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Medtr8g106590.1/M0145_1.02/CISBP XX ID Medtr8g106590.1:M0145_1.02:CISBP XX NA Medtr8g106590.1 XX DE Medtr8g106590.1 XX OS Medicago truncatula XX BF 10507; XX P0 A C G T 01 84 0 12 4 A 02 88 0 0 12 A 03 83 0 0 17 A 04 69 0 0 31 W 05 17 0 0 83 T 06 83 0 0 17 A 07 76 3 0 21 A 08 19 3 0 78 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Medtr8g106590.1:M0145_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LEC2/M0146_1.02/CISBP XX ID LEC2:M0146_1.02:CISBP XX NA LEC2 XX DE LEC2 XX OS Arabidopsis thaliana XX BF 9908; XX P0 A C G T 01 66 33 0 1 m 02 0 0 1 99 T 03 0 0 100 0 G 04 1 99 0 0 C 05 99 0 1 0 A 06 0 0 1 99 T 07 0 0 100 0 G 08 0 99 1 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LEC2:M0146_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF8/M0147_1.02/CISBP XX ID ARF8:M0147_1.02:CISBP XX NA ARF8 XX DE ARF8 XX OS Arabidopsis thaliana XX BF 10508; XX P0 A C G T 01 28 23 20 29 w 02 22 26 11 41 y 03 0 0 9 91 T 04 4 0 90 6 G 05 0 1 0 99 T 06 5 87 0 8 C 07 6 3 80 11 G 08 12 14 65 9 g 09 23 33 22 22 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF8:M0147_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK18474.1/M0149_1.02/CISBP XX ID PK18474.1:M0149_1.02:CISBP XX NA PK18474.1 XX DE PK18474.1 XX OS Cannabis sativa XX BF 10511; XX P0 A C G T 01 24 54 13 9 c 02 62 8 12 18 a 03 7 73 0 20 C 04 19 0 77 4 G 05 1 13 1 85 T 06 17 1 75 7 G 07 14 45 21 20 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK18474.1:M0149_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G01260/M0150_1.02/CISBP XX ID AT1G01260:M0150_1.02:CISBP XX NA AT1G01260 XX DE AT1G01260 XX OS Arabidopsis thaliana XX BF 10512; XX P0 A C G T 01 6 28 44 22 s 02 0 100 0 0 C 03 100 0 0 0 A 04 0 100 0 0 C 05 0 0 100 0 G 06 0 0 0 100 T 07 0 0 100 0 G 08 13 7 27 53 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G01260:M0150_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC POC1/M0151_1.02/CISBP XX ID POC1:M0151_1.02:CISBP XX NA POC1 XX DE POC1 XX OS Arabidopsis thaliana XX BF 2964; XX P0 A C G T 01 18 55 14 13 c 02 74 0 16 10 A 03 0 71 0 29 Y 04 0 0 88 12 G 05 0 0 1 99 T 06 1 1 98 0 G 07 22 30 35 13 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=POC1:M0151_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYC2/M0152_1.02/CISBP XX ID MYC2:M0152_1.02:CISBP XX NA MYC2 XX DE MYC2 XX OS Arabidopsis thaliana XX BF 7517; XX P0 A C G T 01 27 28 20 25 m 02 26 19 37 18 r 03 12 85 0 3 C 04 85 1 8 6 A 05 1 86 0 13 C 06 13 0 86 1 G 07 6 8 1 85 T 08 3 0 85 12 G 09 18 37 20 25 y 10 25 21 28 26 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYC2:M0152_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZCW32/M0153_1.02/CISBP XX ID ZCW32:M0153_1.02:CISBP XX NA ZCW32 XX DE ZCW32 XX OS Arabidopsis thaliana XX BF 10513; XX P0 A C G T 01 23 27 29 21 s 02 22 30 26 22 s 03 19 53 13 15 c 04 69 10 14 7 A 05 2 75 4 19 C 06 16 0 83 1 G 07 2 4 0 94 T 08 1 4 93 2 G 09 19 34 26 21 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZCW32:M0153_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM2/M0154_1.02/CISBP XX ID BIM2:M0154_1.02:CISBP XX NA BIM2 XX DE BIM2 XX OS Arabidopsis thaliana XX BF 10514; XX P0 A C G T 01 24 26 29 21 s 02 17 14 37 32 k 03 5 90 0 5 C 04 97 0 2 1 A 05 2 89 0 9 C 06 9 0 89 2 G 07 2 2 0 96 T 08 5 0 90 5 G 09 32 37 14 17 m 10 21 29 26 24 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM2:M0154_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G18300/M0155_1.02/CISBP XX ID AT2G18300:M0155_1.02:CISBP XX NA AT2G18300 XX DE AT2G18300 XX OS Arabidopsis thaliana XX BF 10515; XX P0 A C G T 01 23 31 23 23 c 02 23 23 31 23 g 03 13 24 32 31 k 04 2 11 76 11 G 05 0 100 0 0 C 06 100 0 0 0 A 07 0 90 0 10 C 08 0 0 100 0 G 09 2 2 2 94 T 10 2 2 94 2 G 11 20 48 20 12 c 12 22 23 23 32 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G18300:M0155_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIL5/M0156_1.02/CISBP XX ID PIL5:M0156_1.02:CISBP XX NA PIL5 XX DE PIL5 XX OS Arabidopsis thaliana XX BF 3877; XX P0 A C G T 01 29 21 30 20 r 02 14 28 28 30 b 03 2 95 1 2 C 04 96 0 2 2 A 05 0 91 0 9 C 06 9 0 91 0 G 07 2 2 0 96 T 08 3 1 94 2 G 09 30 28 28 14 v 10 20 30 22 28 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIL5:M0156_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH34/M0157_1.02/CISBP XX ID bHLH34:M0157_1.02:CISBP XX NA bHLH34 XX DE bHLH34 XX OS Arabidopsis thaliana XX BF 10516; XX P0 A C G T 01 16 4 65 15 g 02 0 100 0 0 C 03 73 0 24 3 A 04 0 85 0 15 C 05 0 0 100 0 G 06 0 0 0 100 T 07 0 0 100 0 G 08 10 14 47 29 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH34:M0157_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC UNE10/M0158_1.02/CISBP XX ID UNE10:M0158_1.02:CISBP XX NA UNE10 XX DE UNE10 XX OS Arabidopsis thaliana XX BF 10517; XX P0 A C G T 01 21 51 7 21 c 02 0 100 0 0 C 03 100 0 0 0 A 04 0 100 0 0 C 05 0 0 100 0 G 06 0 0 0 100 T 07 0 0 100 0 G 08 27 53 7 13 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=UNE10:M0158_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH104/M0159_1.02/CISBP XX ID bHLH104:M0159_1.02:CISBP XX NA bHLH104 XX DE bHLH104 XX OS Arabidopsis thaliana XX BF 10518; XX P0 A C G T 01 13 3 82 2 G 02 2 7 87 4 G 03 1 99 0 0 C 04 100 0 0 0 A 05 0 100 0 0 C 06 0 0 100 0 G 07 0 0 0 100 T 08 0 0 99 1 G 09 4 87 7 2 C 10 2 82 3 13 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH104:M0159_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYC4/M0160_1.02/CISBP XX ID MYC4:M0160_1.02:CISBP XX NA MYC4 XX DE MYC4 XX OS Arabidopsis thaliana XX BF 9777; XX P0 A C G T 01 28 28 20 24 m 02 26 19 36 19 r 03 13 83 1 3 C 04 86 0 7 7 A 05 3 82 0 15 C 06 15 0 82 3 G 07 7 7 0 86 T 08 3 1 83 13 G 09 19 36 19 26 y 10 24 20 28 28 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYC4:M0160_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BEE2/M0161_1.02/CISBP XX ID BEE2:M0161_1.02:CISBP XX NA BEE2 XX DE BEE2 XX OS Arabidopsis thaliana XX BF 10519; XX P0 A C G T 01 26 24 24 26 h 02 21 23 34 22 g 03 14 72 4 10 C 04 89 1 3 7 A 05 2 82 0 16 C 06 16 0 82 2 G 07 7 3 0 90 T 08 10 4 72 14 G 09 22 34 23 21 c 10 26 24 24 26 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BEE2:M0161_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPT/M0162_1.02/CISBP XX ID SPT:M0162_1.02:CISBP XX NA SPT XX DE SPT XX OS Arabidopsis thaliana XX BF 10520; XX P0 A C G T 01 20 43 21 16 c 02 5 56 26 13 s 03 0 96 0 4 C 04 88 0 10 2 A 05 1 91 0 8 C 06 9 0 91 0 G 07 0 1 0 99 T 08 8 12 72 8 G 09 22 30 24 24 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPT:M0162_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM1/M0163_1.02/CISBP XX ID BIM1:M0163_1.02:CISBP XX NA BIM1 XX DE BIM1 XX OS Arabidopsis thaliana XX BF 10521; XX P0 A C G T 01 22 25 28 25 g 02 13 65 10 12 c 03 59 10 18 13 a 04 6 77 2 15 C 05 14 6 80 0 G 06 0 2 0 98 T 07 0 0 99 1 G 08 38 29 15 18 m 09 15 34 24 27 y 10 26 25 26 23 v XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM1:M0163_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM3/M0164_1.02/CISBP XX ID BIM3:M0164_1.02:CISBP XX NA BIM3 XX DE BIM3 XX OS Arabidopsis thaliana XX BF 10522; XX P0 A C G T 01 29 20 27 24 r 02 17 16 43 24 g 03 7 82 1 10 C 04 94 1 2 3 A 05 1 92 0 7 C 06 7 0 92 1 G 07 3 2 0 95 T 08 10 1 82 7 G 09 25 43 16 16 c 10 23 27 21 29 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM3:M0164_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYC3/M0165_1.02/CISBP XX ID MYC3:M0165_1.02:CISBP XX NA MYC3 XX DE MYC3 XX OS Arabidopsis thaliana XX BF 9988; XX P0 A C G T 01 19 63 5 13 c 02 58 7 13 22 a 03 4 66 8 22 c 04 18 0 74 8 G 05 1 12 0 87 T 06 9 0 73 18 G 07 17 34 26 23 s 08 23 25 26 26 k 09 25 21 24 30 w 10 30 23 20 27 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYC3:M0165_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G48560/M0166_1.02/CISBP XX ID AT5G48560:M0166_1.02:CISBP XX NA AT5G48560 XX DE AT5G48560 XX OS Arabidopsis thaliana XX BF 10523; XX P0 A C G T 01 1 1 97 1 G 02 1 97 1 1 C 03 97 1 1 1 A 04 1 97 1 1 C 05 1 1 97 1 G 06 1 1 1 97 T 07 1 1 97 1 G 08 1 97 1 1 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G48560:M0166_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ILR3/M0167_1.02/CISBP XX ID ILR3:M0167_1.02:CISBP XX NA ILR3 XX DE ILR3 XX OS Arabidopsis thaliana XX BF 10524; XX P0 A C G T 01 26 20 30 24 r 02 27 23 33 17 r 03 13 80 2 5 C 04 68 9 12 11 A 05 0 86 0 14 C 06 13 1 86 0 G 07 12 12 8 68 T 08 5 2 80 13 G 09 17 33 23 27 y 10 25 30 20 25 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ILR3:M0167_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bhlh112/M0229_1.02/CISBP XX ID bhlh112:M0229_1.02:CISBP XX NA bhlh112 XX DE bhlh112 XX OS Oryza sativa XX BF 10614; XX P0 A C G T 01 22 25 31 22 s 02 0 100 0 0 C 03 18 82 0 0 C 04 100 0 0 0 A 05 0 100 0 0 C 06 0 0 0 100 T 07 0 0 0 100 T 08 0 0 100 0 G 09 22 34 22 22 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bhlh112:M0229_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.209.40.1/M0250_1.02/CISBP XX ID e_gw1.209.40.1:M0250_1.02:CISBP XX NA e_gw1.209.40.1 XX DE e_gw1.209.40.1 XX OS Physcomitrella patens XX BF 10630; XX P0 A C G T 01 25 27 22 26 y 02 21 23 39 17 g 03 11 84 1 4 C 04 92 0 1 7 A 05 2 94 0 4 C 06 4 0 94 2 G 07 7 1 0 92 T 08 4 1 84 11 G 09 17 39 23 21 c 10 26 22 27 25 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.209.40.1:M0250_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.scaffold_37000071/M0251_1.02/CISBP XX ID fgenesh1_pg.scaffold_37000071:M0251_1.02:CISBP XX NA fgenesh1_pg.scaffold_37000071 XX DE fgenesh1_pg.scaffold_37000071 XX OS Physcomitrella patens XX BF 10631; XX P0 A C G T 01 26 24 31 19 r 02 21 18 27 34 k 03 7 85 2 6 C 04 80 0 11 9 A 05 5 80 0 15 C 06 15 0 80 5 G 07 9 10 0 81 T 08 6 2 85 7 G 09 34 27 18 21 m 10 19 31 24 26 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.scaffold_37000071:M0251_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC gw1.270.82.1/M0252_1.02/CISBP XX ID gw1.270.82.1:M0252_1.02:CISBP XX NA gw1.270.82.1 XX DE gw1.270.82.1 XX OS Physcomitrella patens XX BF 10632; XX P0 A C G T 01 15 47 15 23 c 02 0 100 0 0 C 03 100 0 0 0 A 04 0 100 0 0 C 05 5 0 95 0 G 06 0 0 0 100 T 07 0 0 100 0 G 08 15 64 7 14 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=gw1.270.82.1:M0252_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.C_Chr_14.0001000151/M0253_1.02/CISBP XX ID fgenesh1_pg.C_Chr_14.0001000151:M0253_1.02:CISBP XX NA fgenesh1_pg.C_Chr_14.0001000151 XX DE fgenesh1_pg.C_Chr_14.0001000151 XX OS Ostreococcus tauri XX BF 10633; XX P0 A C G T 01 27 16 40 17 r 02 26 8 56 10 r 03 11 77 4 8 C 04 27 6 57 10 r 05 1 63 1 35 y 06 3 4 92 1 G 07 2 9 1 88 T 08 2 0 95 3 G 09 8 30 27 35 b 10 18 40 18 24 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.C_Chr_14.0001000151:M0253_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP68/M0255_1.02/CISBP XX ID bZIP68:M0255_1.02:CISBP XX NA bZIP68 XX DE bZIP68 XX OS Arabidopsis thaliana XX BF 10635; XX P0 A C G T 01 25 34 12 29 h 02 18 33 26 23 s 03 62 13 14 11 a 04 7 65 15 13 c 05 12 16 63 9 g 06 3 6 0 91 T 07 3 0 95 2 G 08 0 7 55 38 k 09 29 48 13 10 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP68:M0255_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATAREB1/M0256_1.02/CISBP XX ID ATAREB1:M0256_1.02:CISBP XX NA ATAREB1 XX DE ATAREB1 XX OS Arabidopsis thaliana XX BF 10636; XX P0 A C G T 01 23 31 23 23 c 02 31 23 23 23 a 03 19 27 19 35 y 04 27 13 40 20 r 05 70 18 10 2 A 06 0 84 0 16 C 07 100 0 0 0 A 08 0 92 0 8 C 09 2 2 94 2 G 10 2 2 2 94 T 11 22 6 66 6 g 12 21 13 29 37 k 13 23 23 23 31 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATAREB1:M0256_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF1/M0257_1.02/CISBP XX ID ABF1:M0257_1.02:CISBP XX NA ABF1 XX DE ABF1 XX OS Arabidopsis thaliana XX BF 3856; XX P0 A C G T 01 21 21 37 21 g 02 26 16 33 25 r 03 68 18 7 7 a 04 16 75 0 9 C 05 73 8 11 8 A 06 0 91 0 9 C 07 18 0 82 0 G 08 0 10 0 90 T 09 12 4 71 13 G 10 16 19 40 25 k 11 18 28 28 26 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF1:M0257_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G77920/M0259_1.02/CISBP XX ID AT1G77920:M0259_1.02:CISBP XX NA AT1G77920 XX DE AT1G77920 XX OS Arabidopsis thaliana XX BF 10637; XX P0 A C G T 01 19 21 34 26 k 02 35 17 48 0 r 03 2 0 0 98 T 04 8 0 87 5 G 05 92 2 0 6 A 06 0 86 2 12 C 07 4 0 81 15 G 08 5 16 5 74 T 09 26 57 10 7 m 10 60 6 12 22 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G77920:M0259_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G21230/M0260_1.02/CISBP XX ID AT2G21230:M0260_1.02:CISBP XX NA AT2G21230 XX DE AT2G21230 XX OS Arabidopsis thaliana XX BF 10638; XX P0 A C G T 01 13 29 11 47 y 02 9 0 72 19 G 03 57 43 0 0 m 04 1 97 0 2 C 05 94 4 0 2 A 06 21 1 77 1 G 07 2 68 8 22 C 08 1 9 3 87 T 09 19 8 66 7 g 10 9 6 39 46 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G21230:M0260_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI5/M0261_1.02/CISBP XX ID ABI5:M0261_1.02:CISBP XX NA ABI5 XX DE ABI5 XX OS Arabidopsis thaliana XX BF 3091; XX P0 A C G T 01 17 26 26 31 b 02 8 9 66 17 g 03 61 31 0 8 m 04 0 92 8 0 C 05 100 0 0 0 A 06 0 100 0 0 C 07 0 0 100 0 G 08 0 0 0 100 T 09 15 7 71 7 G 10 16 16 34 34 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI5:M0261_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G40620/M0262_1.02/CISBP XX ID AT2G40620:M0262_1.02:CISBP XX NA AT2G40620 XX DE AT2G40620 XX OS Arabidopsis thaliana XX BF 10639; XX P0 A C G T 01 21 21 19 39 t 02 16 2 54 28 k 03 56 40 1 3 m 04 6 79 1 14 C 05 94 0 0 6 A 06 24 7 58 11 g 07 14 52 13 21 c 08 17 21 11 51 t 09 23 16 38 23 g 10 22 13 33 32 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G40620:M0262_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BZIP17/M0263_1.02/CISBP XX ID BZIP17:M0263_1.02:CISBP XX NA BZIP17 XX DE BZIP17 XX OS Arabidopsis thaliana XX BF 10640; XX P0 A C G T 01 26 21 32 21 r 02 35 18 30 17 r 03 18 22 10 50 t 04 12 19 51 18 g 05 79 5 8 8 A 06 1 80 1 18 C 07 18 0 78 4 G 08 14 19 3 64 t 09 24 10 54 12 g 10 16 14 39 31 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BZIP17:M0263_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF3/M0264_1.02/CISBP XX ID GBF3:M0264_1.02:CISBP XX NA GBF3 XX DE GBF3 XX OS Arabidopsis thaliana XX BF 10641; XX P0 A C G T 01 20 32 11 37 y 02 10 27 33 30 b 03 73 9 10 8 A 04 4 65 17 14 c 05 7 18 66 9 g 06 5 4 1 90 T 07 7 0 89 4 G 08 0 6 54 40 k 09 33 41 14 12 m 10 32 28 19 21 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF3:M0264_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA6/M0265_1.02/CISBP XX ID TGA6:M0265_1.02:CISBP XX NA TGA6 XX DE TGA6 XX OS Arabidopsis thaliana XX BF 10642; XX P0 A C G T 01 21 21 33 25 k 02 43 21 21 15 a 03 0 0 0 100 T 04 0 0 100 0 G 05 100 0 0 0 A 06 0 100 0 0 C 07 0 0 100 0 G 08 0 0 0 100 T 09 28 60 8 4 m 10 67 9 14 10 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA6:M0265_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF2/M0266_1.02/CISBP XX ID GBF2:M0266_1.02:CISBP XX NA GBF2 XX DE GBF2 XX OS Arabidopsis thaliana XX BF 496; XX P0 A C G T 01 12 17 43 28 k 02 37 50 12 1 m 03 3 88 0 9 C 04 94 0 6 0 A 05 9 59 22 10 c 06 14 20 59 7 g 07 14 18 15 53 t 08 25 28 29 18 s 09 31 14 35 20 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF2:M0266_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF3/M0267_1.02/CISBP XX ID ABF3:M0267_1.02:CISBP XX NA ABF3 XX DE ABF3 XX OS Arabidopsis thaliana XX BF 10643; XX P0 A C G T 01 97 1 1 1 A 02 1 97 1 1 C 03 97 1 1 1 A 04 1 97 1 1 C 05 1 1 97 1 G 06 1 1 1 97 T 07 1 1 97 1 G 08 1 1 1 97 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF3:M0267_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF1/M0268_1.02/CISBP XX ID GBF1:M0268_1.02:CISBP XX NA GBF1 XX DE GBF1 XX OS Arabidopsis thaliana XX BF 10644; XX P0 A C G T 01 20 33 7 40 y 02 6 32 40 22 s 03 86 4 5 5 A 04 2 78 11 9 C 05 6 14 75 5 G 06 2 3 0 95 T 07 5 0 95 0 G 08 0 5 61 34 k 09 28 54 10 8 m 10 36 29 15 20 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF1:M0268_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA2/M0269_1.02/CISBP XX ID TGA2:M0269_1.02:CISBP XX NA TGA2 XX DE TGA2 XX OS Arabidopsis thaliana XX BF 3636; XX P0 A C G T 01 20 23 32 25 k 02 27 20 46 7 r 03 0 3 0 97 T 04 2 9 85 4 G 05 86 0 11 3 A 06 0 78 3 19 C 07 12 4 79 5 G 08 11 13 8 68 t 09 33 37 16 14 m 10 50 17 19 14 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA2:M0269_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OBF5/M0270_1.02/CISBP XX ID OBF5:M0270_1.02:CISBP XX NA OBF5 XX DE OBF5 XX OS Arabidopsis thaliana XX BF 10645; XX P0 A C G T 01 44 25 29 2 r 02 0 0 0 100 T 03 0 0 91 9 G 04 98 0 2 0 A 05 0 100 0 0 C 06 2 0 98 0 G 07 0 10 0 90 T 08 35 29 21 15 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OBF5:M0270_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA4/M0271_1.02/CISBP XX ID TGA4:M0271_1.02:CISBP XX NA TGA4 XX DE TGA4 XX OS Arabidopsis thaliana XX BF 10646; XX P0 A C G T 01 16 9 62 13 g 02 27 49 18 6 m 03 5 0 0 95 T 04 12 0 64 24 g 05 95 0 3 2 A 06 9 85 1 5 C 07 18 0 80 2 G 08 13 13 7 67 t 09 36 32 19 13 m 10 41 8 36 15 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA4:M0271_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtbZIP63/M0272_1.02/CISBP XX ID AtbZIP63:M0272_1.02:CISBP XX NA AtbZIP63 XX DE AtbZIP63 XX OS Arabidopsis thaliana XX BF 10647; XX P0 A C G T 01 23 23 23 31 t 02 21 20 39 20 g 03 19 44 18 19 c 04 17 15 2 66 t 05 0 36 64 0 s 06 100 0 0 0 A 07 0 100 0 0 C 08 0 0 100 0 G 09 2 2 2 94 T 10 5 12 78 5 G 11 14 6 60 20 g 12 23 31 23 23 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtbZIP63:M0272_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA1/M0273_1.02/CISBP XX ID TGA1:M0273_1.02:CISBP XX NA TGA1 XX DE TGA1 XX OS Arabidopsis thaliana XX BF 10648; XX P0 A C G T 01 21 21 36 22 g 02 32 30 32 6 v 03 3 2 2 93 T 04 4 5 76 15 G 05 90 0 3 7 A 06 2 75 2 21 C 07 13 9 70 8 G 08 17 17 11 55 t 09 29 35 18 18 m 10 38 18 22 22 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA1:M0273_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os02g49560/M0327_1.02/CISBP XX ID LOC_Os02g49560:M0327_1.02:CISBP XX NA LOC_Os02g49560 XX DE LOC_Os02g49560 XX OS Oryza sativa XX BF 10692; XX P0 A C G T 01 22 22 23 33 t 02 18 18 39 25 g 03 20 64 4 12 c 04 0 93 7 0 C 05 100 0 0 0 A 06 0 100 0 0 C 07 0 0 100 0 G 08 0 0 0 100 T 09 3 22 73 2 G 10 27 7 19 47 w 11 21 29 21 29 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os02g49560:M0327_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os05g36160/M0329_1.02/CISBP XX ID LOC_Os05g36160:M0329_1.02:CISBP XX NA LOC_Os05g36160 XX DE LOC_Os05g36160 XX OS Oryza sativa XX BF 10693; XX P0 A C G T 01 66 33 1 0 m 02 0 100 0 0 C 03 99 0 0 1 A 04 1 99 0 0 C 05 0 0 99 1 G 06 0 1 0 99 T 07 1 0 99 0 G 08 0 0 50 50 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os05g36160:M0329_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0100010379/M0361_1.02/CISBP XX ID 0100010379:M0361_1.02:CISBP XX NA 0100010379 XX DE 0100010379 XX OS Ostreococcus tauri XX BF 10719; XX P0 A C G T 01 34 21 25 20 r 02 22 25 4 49 t 03 16 16 34 34 k 04 76 4 7 13 A 05 10 66 2 22 c 06 22 2 66 10 g 07 13 7 4 76 T 08 34 35 16 15 m 09 50 4 25 21 a 10 20 25 20 35 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0100010379:M0361_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0300010272/M0362_1.02/CISBP XX ID 0300010272:M0362_1.02:CISBP XX NA 0300010272 XX DE 0300010272 XX OS Ostreococcus tauri XX BF 10720; XX P0 A C G T 01 43 12 42 3 r 02 0 0 0 100 T 03 5 0 86 9 G 04 94 2 0 4 A 05 0 90 0 10 C 06 14 2 81 3 G 07 12 18 7 63 t 08 28 36 25 11 v 09 37 12 23 28 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0300010272:M0362_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0300010311/M0363_1.02/CISBP XX ID 0300010311:M0363_1.02:CISBP XX NA 0300010311 XX DE 0300010311 XX OS Ostreococcus tauri XX BF 10721; XX P0 A C G T 01 29 21 29 21 r 02 23 13 6 58 t 03 3 38 56 3 s 04 100 0 0 0 A 05 0 100 0 0 C 06 0 0 100 0 G 07 0 0 0 100 T 08 0 10 90 0 G 09 14 4 60 22 g 10 20 41 20 19 c 11 34 22 22 22 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0300010311:M0363_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 1500010105/M0364_1.02/CISBP XX ID 1500010105:M0364_1.02:CISBP XX NA 1500010105 XX DE 1500010105 XX OS Ostreococcus tauri XX BF 10722; XX P0 A C G T 01 25 22 24 29 w 02 8 46 6 40 y 03 12 1 79 8 G 04 21 79 0 0 C 05 6 92 0 2 C 06 100 0 0 0 A 07 3 90 7 0 C 08 4 10 84 2 G 09 1 6 0 93 T 10 5 10 79 6 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=1500010105:M0364_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_fgenesh1_pg.C_Chr_04.00010098/M0365_1.02/CISBP XX ID estExt_fgenesh1_pg.C_Chr_04.00010098:M0365_1.02:CISBP XX NA estExt_fgenesh1_pg.C_Chr_04.00010098 XX DE estExt_fgenesh1_pg.C_Chr_04.00010098 XX OS Ostreococcus tauri XX BF 10723; XX P0 A C G T 01 15 26 12 47 y 02 10 4 61 25 k 03 34 64 1 1 m 04 2 95 0 3 C 05 99 0 0 1 A 06 21 15 60 4 g 07 19 39 28 14 s 08 16 30 32 22 s 09 18 24 17 41 t 10 22 17 37 24 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_fgenesh1_pg.C_Chr_04.00010098:M0365_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.C_Chr_07.0001000033/M0366_1.02/CISBP XX ID fgenesh1_pg.C_Chr_07.0001000033:M0366_1.02:CISBP XX NA fgenesh1_pg.C_Chr_07.0001000033 XX DE fgenesh1_pg.C_Chr_07.0001000033 XX OS Ostreococcus tauri XX BF 10724; XX P0 A C G T 01 31 23 23 23 a 02 18 18 18 46 t 03 13 13 61 13 g 04 13 61 13 13 c 05 11 20 0 69 T 06 0 31 69 0 S 07 100 0 0 0 A 08 0 100 0 0 C 09 2 2 73 23 G 10 7 17 7 69 T 11 12 12 64 12 g 12 12 12 32 44 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.C_Chr_07.0001000033:M0366_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZFP5/M0369_1.02/CISBP XX ID ZFP5:M0369_1.02:CISBP XX NA ZFP5 XX DE ZFP5 XX OS Arabidopsis thaliana XX BF 10727; XX P0 A C G T 01 25 24 25 26 w 02 21 24 27 28 k 03 23 25 25 27 y 04 26 18 30 26 d 05 76 5 8 11 A 06 65 0 6 29 w 07 6 53 40 1 s 08 18 22 7 53 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZFP5:M0369_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC STZ/M0370_1.02/CISBP XX ID STZ:M0370_1.02:CISBP XX NA STZ XX DE STZ XX OS Arabidopsis thaliana XX BF 10728; XX P0 A C G T 01 23 23 31 23 g 02 68 4 10 18 a 03 8 38 52 2 s 04 7 15 0 78 T 05 28 6 51 15 r 06 30 16 21 33 w 07 28 23 25 24 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=STZ:M0370_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZFP8/M0371_1.02/CISBP XX ID ZFP8:M0371_1.02:CISBP XX NA ZFP8 XX DE ZFP8 XX OS Arabidopsis thaliana XX BF 10729; XX P0 A C G T 01 46 14 14 26 w 02 3 33 56 8 s 03 27 8 0 65 w 04 14 10 10 66 t 05 26 29 19 26 h 06 27 25 25 23 r 07 27 26 24 23 m 08 25 23 26 26 k 09 24 25 22 29 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZFP8:M0371_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AZF2/M0372_1.02/CISBP XX ID AZF2:M0372_1.02:CISBP XX NA AZF2 XX DE AZF2 XX OS Arabidopsis thaliana XX BF 10730; XX P0 A C G T 01 21 24 31 24 g 02 78 0 10 12 A 03 0 40 59 1 s 04 7 7 0 86 T 05 22 5 64 9 g 06 30 13 22 35 w 07 28 23 27 22 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AZF2:M0372_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAT7/M0373_1.02/CISBP XX ID ZAT7:M0373_1.02:CISBP XX NA ZAT7 XX DE ZAT7 XX OS Arabidopsis thaliana XX BF 10731; XX P0 A C G T 01 30 32 19 19 m 02 29 27 17 27 h 03 27 29 17 27 h 04 17 27 27 29 b 05 93 2 3 2 A 06 0 20 80 0 G 07 20 0 0 80 T 08 0 0 100 0 G 09 6 15 14 65 t 10 48 17 27 8 r 11 26 48 8 18 m 12 8 18 17 57 t 13 23 23 32 22 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAT7:M0373_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G53600/M0374_1.02/CISBP XX ID AT3G53600:M0374_1.02:CISBP XX NA AT3G53600 XX DE AT3G53600 XX OS Arabidopsis thaliana XX BF 8906; XX P0 A C G T 01 24 23 30 23 g 02 59 3 12 26 w 03 2 36 59 3 s 04 3 18 0 79 T 05 27 9 48 16 r 06 28 18 24 30 w 07 25 24 26 25 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G53600:M0374_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G04390/M0375_1.02/CISBP XX ID AT5G04390:M0375_1.02:CISBP XX NA AT5G04390 XX DE AT5G04390 XX OS Arabidopsis thaliana XX BF 10732; XX P0 A C G T 01 25 24 30 21 r 02 66 3 8 23 a 03 6 34 56 4 s 04 6 25 0 69 T 05 32 8 40 20 r 06 30 19 23 28 w 07 27 25 24 24 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G04390:M0375_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RBE/M0376_1.02/CISBP XX ID RBE:M0376_1.02:CISBP XX NA RBE XX DE RBE XX OS Arabidopsis thaliana XX BF 10733; XX P0 A C G T 01 26 24 26 24 r 02 69 2 0 29 W 03 10 34 56 0 s 04 5 13 3 79 T 05 21 15 31 33 k 06 32 17 27 24 r 07 26 25 19 30 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RBE:M0376_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RHL41/M0377_1.02/CISBP XX ID RHL41:M0377_1.02:CISBP XX NA RHL41 XX DE RHL41 XX OS Arabidopsis thaliana XX BF 10734; XX P0 A C G T 01 26 24 29 21 r 02 63 2 8 27 w 03 2 28 69 1 S 04 1 23 0 76 T 05 26 12 45 17 r 06 28 20 24 28 w 07 26 23 26 25 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RHL41:M0377_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AZF1/M0378_1.02/CISBP XX ID AZF1:M0378_1.02:CISBP XX NA AZF1 XX DE AZF1 XX OS Arabidopsis thaliana XX BF 10735; XX P0 A C G T 01 22 24 30 24 g 02 67 1 13 19 a 03 0 38 61 1 s 04 5 23 0 72 T 05 18 6 61 15 g 06 26 17 25 32 w 07 25 24 27 24 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AZF1:M0378_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CAMTA3/M0581_1.02/CISBP XX ID CAMTA3:M0581_1.02:CISBP XX NA CAMTA3 XX DE CAMTA3 XX OS Arabidopsis thaliana XX BF 7521; XX P0 A C G T 01 23 54 19 4 c 02 2 97 0 1 C 03 3 0 96 1 G 04 7 66 0 27 y 05 4 0 96 0 G 06 0 0 0 100 T 07 23 27 21 29 y 08 29 25 25 21 a 09 24 26 25 25 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CAMTA3:M0581_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G64220/M0582_1.02/CISBP XX ID AT5G64220:M0582_1.02:CISBP XX NA AT5G64220 XX DE AT5G64220 XX OS Arabidopsis thaliana XX BF 10935; XX P0 A C G T 01 32 20 22 26 w 02 33 23 18 26 w 03 39 12 25 24 a 04 21 44 31 4 s 05 3 95 1 1 C 06 2 1 97 0 G 07 3 68 1 28 Y 08 1 0 97 2 G 09 1 1 5 93 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G64220:M0582_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATGRP2B/M0583_1.02/CISBP XX ID ATGRP2B:M0583_1.02:CISBP XX NA ATGRP2B XX DE ATGRP2B XX OS Arabidopsis thaliana XX BF 10937; XX P0 A C G T 01 0 0 33 67 k 02 0 0 0 100 T 03 1 0 0 99 T 04 1 0 0 99 T 05 1 0 0 99 T 06 66 0 0 34 w 07 0 0 1 99 T 08 1 0 0 99 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATGRP2B:M0583_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK22848.1/M0587_1.02/CISBP XX ID PK22848.1:M0587_1.02:CISBP XX NA PK22848.1 XX DE PK22848.1 XX OS Cannabis sativa XX BF 10943; XX P0 A C G T 01 29 29 21 21 m 02 27 24 25 24 a 03 68 11 10 11 a 04 78 7 8 7 A 05 83 3 3 11 A 06 0 0 0 100 T 07 0 0 0 100 T 08 0 0 8 92 T 09 26 13 13 48 w 10 63 9 18 10 a 11 57 14 14 15 a 12 39 18 18 25 w 13 35 22 22 21 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK22848.1:M0587_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G20110/M0588_1.02/CISBP XX ID AT2G20110:M0588_1.02:CISBP XX NA AT2G20110 XX DE AT2G20110 XX OS Arabidopsis thaliana XX BF 10944; XX P0 A C G T 01 40 0 40 20 r 02 0 0 0 100 T 03 0 1 0 99 T 04 0 20 0 80 T 05 80 0 20 0 A 06 99 0 0 1 A 07 99 0 1 0 A 08 25 25 0 50 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G20110:M0588_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G04850/M0589_1.02/CISBP XX ID AT3G04850:M0589_1.02:CISBP XX NA AT3G04850 XX DE AT3G04850 XX OS Arabidopsis thaliana XX BF 10945; XX P0 A C G T 01 52 12 18 18 a 02 51 7 13 29 w 03 12 9 5 74 T 04 6 4 2 88 T 05 2 43 4 51 y 06 51 4 43 2 r 07 88 2 4 6 A 08 74 5 9 12 A 09 29 13 7 51 w 10 18 18 12 52 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G04850:M0589_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SOL1/M0590_1.02/CISBP XX ID SOL1:M0590_1.02:CISBP XX NA SOL1 XX DE SOL1 XX OS Arabidopsis thaliana XX BF 10946; XX P0 A C G T 01 26 10 41 23 r 02 2 2 0 96 T 03 0 0 0 100 T 04 3 15 2 80 T 05 32 0 61 7 r 06 98 0 2 0 A 07 93 0 0 7 A 08 28 11 0 61 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SOL1:M0590_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G29000/M0591_1.02/CISBP XX ID AT4G29000:M0591_1.02:CISBP XX NA AT4G29000 XX DE AT4G29000 XX OS Arabidopsis thaliana XX BF 10947; XX P0 A C G T 01 32 22 23 23 a 02 59 3 25 13 r 03 0 0 0 100 T 04 0 0 0 100 T 05 0 9 0 91 T 06 22 0 78 0 G 07 100 0 0 0 A 08 100 0 0 0 A 09 12 22 2 64 t 10 23 22 23 32 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G29000:M0591_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BRADI1G55710/M0592_1.02/CISBP XX ID BRADI1G55710:M0592_1.02:CISBP XX NA BRADI1G55710 XX DE BRADI1G55710 XX OS Brachypodium distachyon XX BF 10948; XX P0 A C G T 01 29 27 20 24 m 02 46 14 28 12 r 03 6 12 6 76 T 04 11 16 13 60 t 05 6 33 10 51 y 06 51 11 32 6 r 07 60 13 16 11 a 08 76 6 12 6 A 09 12 28 14 46 y 10 24 20 27 29 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BRADI1G55710:M0592_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.C_Chr_09.0001000301/M0598_1.02/CISBP XX ID fgenesh1_pg.C_Chr_09.0001000301:M0598_1.02:CISBP XX NA fgenesh1_pg.C_Chr_09.0001000301 XX DE fgenesh1_pg.C_Chr_09.0001000301 XX OS Ostreococcus tauri XX BF 10954; XX P0 A C G T 01 30 18 28 24 r 02 14 23 13 50 t 03 29 9 16 46 w 04 7 38 12 43 y 05 26 18 37 19 r 06 40 20 23 17 a 07 35 25 18 22 m 08 21 27 23 29 y 09 22 24 27 27 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.C_Chr_09.0001000301:M0598_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgeneshCV_pg.C_scaffold_18000164/M0599_1.02/CISBP XX ID fgeneshCV_pg.C_scaffold_18000164:M0599_1.02:CISBP XX NA fgeneshCV_pg.C_scaffold_18000164 XX DE fgeneshCV_pg.C_scaffold_18000164 XX OS Chlorella vulgaris XX BF 10955; XX P0 A C G T 01 34 10 26 30 d 02 9 10 6 75 T 03 12 8 5 75 T 04 6 24 0 70 T 05 34 14 45 7 r 06 56 13 11 20 a 07 52 14 16 18 a 08 25 22 15 38 w 09 25 20 19 36 t 10 26 19 22 33 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgeneshCV_pg.C_scaffold_18000164:M0599_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC gw1.20.00.89.1/M0601_1.02/CISBP XX ID gw1.20.00.89.1:M0601_1.02:CISBP XX NA gw1.20.00.89.1 XX DE gw1.20.00.89.1 XX OS Ostreococcus tauri XX BF 10957; XX P0 A C G T 01 54 12 11 23 a 02 28 14 20 38 w 03 9 18 12 61 t 04 20 12 9 59 t 05 8 28 21 43 y 06 43 20 29 8 r 07 59 9 12 20 a 08 61 12 18 9 a 09 38 20 14 28 w 10 23 11 12 54 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=gw1.20.00.89.1:M0601_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G29160/M0646_1.02/CISBP XX ID AT1G29160:M0646_1.02:CISBP XX NA AT1G29160 XX DE AT1G29160 XX OS Arabidopsis thaliana XX BF 10997; XX P0 A C G T 01 25 0 58 17 r 02 61 0 0 39 w 03 27 0 0 73 W 04 100 0 0 0 A 05 91 0 9 0 A 06 41 54 0 5 m 07 5 0 95 0 G 08 6 12 0 82 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G29160:M0646_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G64620/M0647_1.02/CISBP XX ID AT1G64620:M0647_1.02:CISBP XX NA AT1G64620 XX DE AT1G64620 XX OS Arabidopsis thaliana XX BF 10998; XX P0 A C G T 01 25 26 26 23 v 02 32 20 25 23 a 03 41 10 14 35 w 04 81 7 4 8 A 05 83 6 0 11 A 06 66 23 3 8 a 07 7 2 85 6 G 08 17 24 23 36 t 09 27 19 27 27 d 10 29 21 27 23 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G64620:M0647_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATDOF2.4/M0648_1.02/CISBP XX ID ATDOF2.4:M0648_1.02:CISBP XX NA ATDOF2.4 XX DE ATDOF2.4 XX OS Arabidopsis thaliana XX BF 10999; XX P0 A C G T 01 38 17 23 22 a 02 43 8 13 36 w 03 81 7 2 10 A 04 81 7 0 12 A 05 66 24 2 8 m 06 8 7 77 8 G 07 18 24 21 37 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATDOF2.4:M0648_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ADOF2/M0649_1.02/CISBP XX ID ADOF2:M0649_1.02:CISBP XX NA ADOF2 XX DE ADOF2 XX OS Arabidopsis thaliana XX BF 11000; XX P0 A C G T 01 24 26 27 23 s 02 31 20 25 24 a 03 35 14 17 34 w 04 81 7 4 8 A 05 80 9 2 9 A 06 50 40 2 8 m 07 11 3 78 8 G 08 20 25 21 34 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ADOF2:M0649_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G45610/M0650_1.02/CISBP XX ID AT3G45610:M0650_1.02:CISBP XX NA AT3G45610 XX DE AT3G45610 XX OS Arabidopsis thaliana XX BF 11001; XX P0 A C G T 01 24 26 26 24 s 02 28 24 23 25 a 03 26 20 20 34 w 04 50 14 17 19 a 05 51 17 17 15 a 06 24 50 4 22 c 07 24 7 54 15 g 08 27 22 22 29 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G45610:M0650_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC cdf3/M0651_1.02/CISBP XX ID cdf3:M0651_1.02:CISBP XX NA cdf3 XX DE cdf3 XX OS Arabidopsis thaliana XX BF 11002; XX P0 A C G T 01 45 14 22 19 a 02 61 3 7 29 w 03 99 1 0 0 A 04 99 0 0 1 A 05 88 3 8 1 A 06 2 1 96 1 G 07 7 29 16 48 y 08 22 10 50 18 g 09 29 34 17 20 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=cdf3:M0651_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF4.7/M0652_1.02/CISBP XX ID DOF4.7:M0652_1.02:CISBP XX NA DOF4.7 XX DE DOF4.7 XX OS Arabidopsis thaliana XX BF 11003; XX P0 A C G T 01 26 25 24 25 w 02 24 23 29 24 g 03 37 17 22 24 a 04 37 12 13 38 w 05 79 6 3 12 A 06 74 10 4 12 A 07 47 38 6 9 m 08 14 4 71 11 G 09 19 23 18 40 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF4.7:M0652_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDF2/M0653_1.02/CISBP XX ID CDF2:M0653_1.02:CISBP XX NA CDF2 XX DE CDF2 XX OS Arabidopsis thaliana XX BF 11004; XX P0 A C G T 01 34 28 23 15 m 02 61 9 15 15 a 03 69 2 4 25 W 04 98 1 0 1 A 05 98 1 0 1 A 06 87 3 8 2 A 07 1 1 97 1 G 08 5 30 15 50 y 09 33 8 39 20 r 10 30 28 16 26 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDF2:M0653_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TMO6/M0654_1.02/CISBP XX ID TMO6:M0654_1.02:CISBP XX NA TMO6 XX DE TMO6 XX OS Arabidopsis thaliana XX BF 11005; XX P0 A C G T 01 25 25 26 24 g 02 33 21 23 23 a 03 40 13 15 32 w 04 84 6 2 8 A 05 85 8 0 7 A 06 61 33 1 5 m 07 7 4 77 12 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TMO6:M0654_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OBP4/M0655_1.02/CISBP XX ID OBP4:M0655_1.02:CISBP XX NA OBP4 XX DE OBP4 XX OS Arabidopsis thaliana XX BF 11006; XX P0 A C G T 01 25 25 25 25 s 02 5 5 75 15 G 03 60 0 0 40 w 04 0 0 0 100 T 05 100 0 0 0 A 06 100 0 0 0 A 07 0 100 0 0 C 08 0 0 100 0 G 09 30 20 10 40 w 10 20 30 20 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OBP4:M0655_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF5.6/M0657_1.02/CISBP XX ID DOF5.6:M0657_1.02:CISBP XX NA DOF5.6 XX DE DOF5.6 XX OS Arabidopsis thaliana XX BF 11007; XX P0 A C G T 01 25 26 26 23 v 02 36 17 23 24 a 03 43 8 11 38 w 04 95 4 0 1 A 05 93 4 0 3 A 06 61 31 6 2 m 07 5 3 88 4 G 08 15 25 21 39 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF5.6:M0657_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.149.93.1/M0658_1.02/CISBP XX ID e_gw1.149.93.1:M0658_1.02:CISBP XX NA e_gw1.149.93.1 XX DE e_gw1.149.93.1 XX OS Physcomitrella patens XX BF 11008; XX P0 A C G T 01 26 26 25 23 v 02 33 20 25 22 r 03 40 14 16 30 w 04 65 13 8 14 a 05 70 10 5 15 A 06 57 25 0 18 m 07 8 8 76 8 G 08 18 26 22 34 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.149.93.1:M0658_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.170.52.1/M0659_1.02/CISBP XX ID e_gw1.170.52.1:M0659_1.02:CISBP XX NA e_gw1.170.52.1 XX DE e_gw1.170.52.1 XX OS Physcomitrella patens XX BF 11009; XX P0 A C G T 01 24 27 25 24 s 02 30 22 26 22 r 03 40 11 17 32 w 04 89 4 1 6 A 05 89 5 0 6 A 06 72 20 3 5 A 07 7 2 84 7 G 08 18 26 23 33 y 09 27 19 27 27 d 10 28 22 27 23 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.170.52.1:M0659_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.392.16.1/M0660_1.02/CISBP XX ID e_gw1.392.16.1:M0660_1.02:CISBP XX NA e_gw1.392.16.1 XX DE e_gw1.392.16.1 XX OS Physcomitrella patens XX BF 11010; XX P0 A C G T 01 25 27 26 22 v 02 33 19 26 22 r 03 48 7 12 33 w 04 86 6 2 6 A 05 93 3 0 4 A 06 67 15 5 13 a 07 7 3 90 0 G 08 13 29 20 38 y 09 28 16 30 26 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.392.16.1:M0660_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_fgenesh1_pg.C_370003/M0661_1.02/CISBP XX ID estExt_fgenesh1_pg.C_370003:M0661_1.02:CISBP XX NA estExt_fgenesh1_pg.C_370003 XX DE estExt_fgenesh1_pg.C_370003 XX OS Physcomitrella patens XX BF 11011; XX P0 A C G T 01 31 18 25 26 w 02 18 44 16 22 c 03 18 19 31 32 k 04 24 13 17 46 t 05 30 13 10 47 w 06 47 10 13 30 w 07 46 17 13 24 a 08 32 31 19 18 m 09 22 16 44 18 g 10 26 24 19 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_fgenesh1_pg.C_370003:M0661_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC gw1.12.257.1/M0662_1.02/CISBP XX ID gw1.12.257.1:M0662_1.02:CISBP XX NA gw1.12.257.1 XX DE gw1.12.257.1 XX OS Physcomitrella patens XX BF 11012; XX P0 A C G T 01 25 26 26 23 v 02 26 21 21 32 w 03 51 18 15 16 a 04 53 18 11 18 a 05 35 39 5 21 m 06 20 13 54 13 g 07 21 25 23 31 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=gw1.12.257.1:M0662_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC gw1.385.26.1/M0663_1.02/CISBP XX ID gw1.385.26.1:M0663_1.02:CISBP XX NA gw1.385.26.1 XX DE gw1.385.26.1 XX OS Physcomitrella patens XX BF 11013; XX P0 A C G T 01 25 26 26 23 v 02 34 19 25 22 r 03 46 9 13 32 w 04 83 7 2 8 A 05 86 6 0 8 A 06 64 22 5 9 a 07 6 3 86 5 G 08 15 27 21 37 y 09 26 17 31 26 d 10 28 26 23 23 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=gw1.385.26.1:M0663_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.C_Chr_08.0001000114/M0664_1.02/CISBP XX ID fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP XX NA fgenesh1_pg.C_Chr_08.0001000114 XX DE fgenesh1_pg.C_Chr_08.0001000114 XX OS Ostreococcus tauri XX BF 11014; XX P0 A C G T 01 24 26 27 23 s 02 36 19 23 22 a 03 41 15 15 29 w 04 61 14 9 16 a 05 64 12 7 17 a 06 55 29 0 16 m 07 12 10 71 7 G 08 17 24 21 38 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.C_Chr_08.0001000114:M0664_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2FE/M0665_1.02/CISBP XX ID E2FE:M0665_1.02:CISBP XX NA E2FE XX DE E2FE XX OS Arabidopsis thaliana XX BF 7504; XX P0 A C G T 01 20 15 7 58 t 02 20 3 29 48 k 03 9 55 32 4 s 04 0 20 80 0 G 05 0 100 0 0 C 06 0 0 100 0 G 07 0 80 20 0 C 08 4 32 55 9 s 09 48 29 3 20 m 10 57 7 15 21 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2FE:M0665_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.38.2.1/M0677_1.02/CISBP XX ID e_gw1.38.2.1:M0677_1.02:CISBP XX NA e_gw1.38.2.1 XX DE e_gw1.38.2.1 XX OS Physcomitrella patens XX BF 11023; XX P0 A C G T 01 23 14 43 20 g 02 15 44 39 2 s 03 2 5 84 9 G 04 1 99 0 0 C 05 1 0 99 0 G 06 2 98 0 0 C 07 8 55 22 15 c 08 41 24 12 23 a 09 38 18 12 32 w 10 31 22 20 27 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.38.2.1:M0677_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_gwp_GeneWisePlus.C_Chr_02.00010270/M0678_1.02/CISBP XX ID estExt_gwp_GeneWisePlus.C_Chr_02.00010270:M0678_1.02:CISBP XX NA estExt_gwp_GeneWisePlus.C_Chr_02.00010270 XX DE estExt_gwp_GeneWisePlus.C_Chr_02.00010270 XX OS Ostreococcus tauri XX BF 11024; XX P0 A C G T 01 27 14 17 42 w 02 24 16 14 46 t 03 11 12 73 4 G 04 2 3 95 0 G 05 0 100 0 0 C 06 0 0 100 0 G 07 0 93 7 0 C 08 2 32 49 17 s 09 11 56 11 22 c 10 38 7 28 27 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_gwp_GeneWisePlus.C_Chr_02.00010270:M0678_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EIL3/M0680_1.02/CISBP XX ID EIL3:M0680_1.02:CISBP XX NA EIL3 XX DE EIL3 XX OS Arabidopsis thaliana XX BF 11026; XX P0 A C G T 01 23 23 32 22 g 02 55 15 15 15 a 03 85 5 5 5 A 04 0 0 0 100 T 05 0 0 100 0 G 06 49 0 0 51 w 07 100 0 0 0 A 08 0 50 0 50 y 09 3 93 2 2 C 10 10 10 10 70 T 11 21 20 39 20 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EIL3:M0680_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EIL1/M0681_1.02/CISBP XX ID EIL1:M0681_1.02:CISBP XX NA EIL1 XX DE EIL1 XX OS Arabidopsis thaliana XX BF 11027; XX P0 A C G T 01 42 26 18 14 m 02 11 19 10 60 t 03 8 13 61 18 g 04 31 20 5 44 w 05 73 8 1 18 A 06 11 41 0 48 y 07 12 46 19 23 c 08 22 20 20 38 t 09 31 18 28 23 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EIL1:M0681_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EIN3/M0682_1.02/CISBP XX ID EIN3:M0682_1.02:CISBP XX NA EIN3 XX DE EIN3 XX OS Arabidopsis thaliana XX BF 11028; XX P0 A C G T 01 24 23 28 25 k 02 24 16 36 24 g 03 45 9 35 11 r 04 9 19 0 72 T 05 29 5 48 18 r 06 18 47 5 30 y 07 73 0 18 9 A 08 11 35 9 45 y 09 24 36 16 24 c 10 25 28 22 25 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EIN3:M0682_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os09g31400/M0683_1.02/CISBP XX ID LOC_Os09g31400:M0683_1.02:CISBP XX NA LOC_Os09g31400 XX DE LOC_Os09g31400 XX OS Oryza sativa XX BF 11030; XX P0 A C G T 01 23 23 31 23 g 02 46 15 24 15 a 03 85 5 5 5 A 04 0 0 0 100 T 05 0 0 100 0 G 06 22 0 0 78 T 07 100 0 0 0 A 08 0 48 0 52 y 09 2 94 2 2 C 10 10 10 18 62 t 11 29 21 30 20 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os09g31400:M0683_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.87.73.1/M0684_1.02/CISBP XX ID e_gw1.87.73.1:M0684_1.02:CISBP XX NA e_gw1.87.73.1 XX DE e_gw1.87.73.1 XX OS Physcomitrella patens XX BF 11031; XX P0 A C G T 01 28 25 24 23 a 02 42 24 22 12 a 03 15 19 9 57 t 04 10 6 68 16 G 05 32 23 7 38 w 06 73 8 1 18 A 07 13 41 2 44 y 08 15 42 20 23 c 09 24 19 21 36 t 10 29 20 27 24 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.87.73.1:M0684_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA10/M0758_1.02/CISBP XX ID GATA10:M0758_1.02:CISBP XX NA GATA10 XX DE GATA10 XX OS Arabidopsis thaliana XX BF 11093; XX P0 A C G T 01 10 7 13 70 T 02 84 3 13 0 A 03 0 0 100 0 G 04 100 0 0 0 A 05 0 0 0 100 T 06 0 100 0 0 C 07 1 11 8 80 T 08 11 11 74 4 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA10:M0758_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA11/M0759_1.02/CISBP XX ID GATA11:M0759_1.02:CISBP XX NA GATA11 XX DE GATA11 XX OS Arabidopsis thaliana XX BF 11094; XX P0 A C G T 01 17 4 17 62 t 02 90 0 10 0 A 03 0 0 100 0 G 04 100 0 0 0 A 05 0 0 0 100 T 06 0 100 0 0 C 07 0 0 0 100 T 08 5 13 69 13 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA11:M0759_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TIFY2A/M0760_1.02/CISBP XX ID TIFY2A:M0760_1.02:CISBP XX NA TIFY2A XX DE TIFY2A XX OS Arabidopsis thaliana XX BF 11095; XX P0 A C G T 01 26 25 23 26 w 02 40 24 13 23 a 03 8 1 86 5 G 04 92 0 1 7 A 05 1 0 0 99 T 06 13 32 31 24 s 07 27 19 26 28 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TIFY2A:M0760_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA15/M0761_1.02/CISBP XX ID GATA15:M0761_1.02:CISBP XX NA GATA15 XX DE GATA15 XX OS Arabidopsis thaliana XX BF 11096; XX P0 A C G T 01 20 28 22 30 y 02 31 20 28 21 r 03 18 29 7 46 y 04 4 4 90 2 G 05 98 0 0 2 A 06 0 0 0 100 T 07 6 66 16 12 c 08 32 20 27 21 r 09 27 24 28 21 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA15:M0761_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TIFY2B/M0762_1.02/CISBP XX ID TIFY2B:M0762_1.02:CISBP XX NA TIFY2B XX DE TIFY2B XX OS Arabidopsis thaliana XX BF 11097; XX P0 A C G T 01 45 23 11 21 a 02 0 0 96 4 G 03 97 0 0 3 A 04 0 0 0 100 T 05 9 40 27 24 s 06 29 19 24 28 w 07 31 17 26 26 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TIFY2B:M0762_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA1/M0763_1.02/CISBP XX ID GATA1:M0763_1.02:CISBP XX NA GATA1 XX DE GATA1 XX OS Arabidopsis thaliana XX BF 7509; XX P0 A C G T 01 26 24 23 27 w 02 20 31 20 29 y 03 38 22 22 18 a 04 18 16 55 11 g 05 87 0 8 5 A 06 5 8 0 87 T 07 11 56 15 18 c 08 18 22 22 38 t 09 28 20 31 21 r 10 27 23 24 26 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA1:M0763_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA6/M0764_1.02/CISBP XX ID GATA6:M0764_1.02:CISBP XX NA GATA6 XX DE GATA6 XX OS Arabidopsis thaliana XX BF 11098; XX P0 A C G T 01 19 27 21 33 y 02 54 13 22 11 a 03 24 8 58 10 g 04 77 2 7 14 A 05 19 0 3 78 T 06 18 56 17 9 c 07 18 13 15 54 t 08 38 8 36 18 r 09 31 14 28 27 d 10 34 19 22 25 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA6:M0764_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA8/M0765_1.02/CISBP XX ID GATA8:M0765_1.02:CISBP XX NA GATA8 XX DE GATA8 XX OS Arabidopsis thaliana XX BF 11099; XX P0 A C G T 01 21 32 26 21 s 02 48 24 15 13 a 03 6 3 90 1 G 04 99 0 0 1 A 05 0 2 0 98 T 06 3 65 13 19 c 07 6 38 11 45 y 08 38 16 37 9 r 09 31 19 32 18 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA8:M0765_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA4/M0766_1.02/CISBP XX ID GATA4:M0766_1.02:CISBP XX NA GATA4 XX DE GATA4 XX OS Arabidopsis thaliana XX BF 7512; XX P0 A C G T 01 28 25 18 29 h 02 18 30 16 36 y 03 44 16 26 14 r 04 16 6 75 3 G 05 94 0 2 4 A 06 4 2 0 94 T 07 3 74 7 16 C 08 13 26 17 44 y 09 36 16 30 18 r 10 29 17 25 29 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA4:M0766_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA26/M0767_1.02/CISBP XX ID GATA26:M0767_1.02:CISBP XX NA GATA26 XX DE GATA26 XX OS Arabidopsis thaliana XX BF 11100; XX P0 A C G T 01 23 30 20 27 y 02 31 37 14 18 m 03 8 5 68 19 G 04 82 1 0 17 A 05 8 16 7 69 T 06 10 43 22 25 c 07 32 17 27 24 r 08 27 22 23 28 w 09 28 20 24 28 w 10 29 24 21 26 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA26:M0767_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA9/M0768_1.02/CISBP XX ID GATA9:M0768_1.02:CISBP XX NA GATA9 XX DE GATA9 XX OS Arabidopsis thaliana XX BF 11101; XX P0 A C G T 01 23 23 22 32 t 02 16 52 16 16 c 03 21 29 5 45 y 04 93 0 7 0 A 05 0 0 100 0 G 06 100 0 0 0 A 07 0 0 0 100 T 08 0 100 0 0 C 09 2 10 2 86 T 10 29 9 45 17 r 11 29 20 20 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA9:M0768_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA3/M0769_1.02/CISBP XX ID GATA3:M0769_1.02:CISBP XX NA GATA3 XX DE GATA3 XX OS Arabidopsis thaliana XX BF 7511; XX P0 A C G T 01 26 23 23 28 w 02 21 32 19 28 y 03 24 25 25 26 w 04 35 23 22 20 a 05 11 8 67 14 g 06 88 0 0 12 A 07 7 7 0 86 T 08 6 46 20 28 y 09 17 26 21 36 y 10 33 18 34 15 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA3:M0769_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA7/M0770_1.02/CISBP XX ID GATA7:M0770_1.02:CISBP XX NA GATA7 XX DE GATA7 XX OS Arabidopsis thaliana XX BF 11102; XX P0 A C G T 01 33 17 22 28 w 02 21 33 14 32 y 03 43 19 23 15 a 04 21 16 48 15 g 05 74 3 3 20 A 06 20 3 3 74 T 07 15 48 16 21 c 08 14 23 19 44 t 09 32 14 33 21 r 10 28 22 17 33 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA7:M0770_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA27/M0771_1.02/CISBP XX ID GATA27:M0771_1.02:CISBP XX NA GATA27 XX DE GATA27 XX OS Arabidopsis thaliana XX BF 11103; XX P0 A C G T 01 24 30 20 26 y 02 31 37 14 18 m 03 8 3 73 16 G 04 86 0 0 14 A 05 5 18 4 73 T 06 11 41 24 24 c 07 32 18 27 23 r 08 28 23 22 27 w 09 29 21 24 26 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA27:M0771_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os06g48534/M0790_1.02/CISBP XX ID LOC_Os06g48534:M0790_1.02:CISBP XX NA LOC_Os06g48534 XX DE LOC_Os06g48534 XX OS Oryza sativa XX BF 11124; XX P0 A C G T 01 27 23 25 25 a 02 28 25 22 25 a 03 26 15 48 11 r 04 49 11 22 18 a 05 0 0 0 100 T 06 23 34 26 17 s 07 23 25 24 28 t 08 26 20 29 25 d 09 24 23 28 25 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os06g48534:M0790_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0300010106/M0807_1.02/CISBP XX ID 0300010106:M0807_1.02:CISBP XX NA 0300010106 XX DE 0300010106 XX OS Ostreococcus tauri XX BF 11129; XX P0 A C G T 01 30 28 16 26 h 02 15 6 67 12 g 03 80 3 7 10 A 04 4 0 0 96 T 05 18 64 12 6 c 06 25 17 24 34 t 07 28 22 25 25 w 08 25 20 27 28 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0300010106:M0807_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.C_Chr_07.0001000042/M0808_1.02/CISBP XX ID fgenesh1_pg.C_Chr_07.0001000042:M0808_1.02:CISBP XX NA fgenesh1_pg.C_Chr_07.0001000042 XX DE fgenesh1_pg.C_Chr_07.0001000042 XX OS Ostreococcus tauri XX BF 11130; XX P0 A C G T 01 32 20 30 18 r 02 16 15 57 12 g 03 88 0 1 11 A 04 9 0 0 91 T 05 9 73 11 7 C 06 27 10 8 55 w 07 21 29 24 26 y 08 26 23 24 27 w 09 28 23 23 26 w 10 28 23 22 27 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.C_Chr_07.0001000042:M0808_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RGL2/M0821_1.02/CISBP XX ID RGL2:M0821_1.02:CISBP XX NA RGL2 XX DE RGL2 XX OS Arabidopsis thaliana XX BF 11143; XX P0 A C G T 01 21 26 18 35 y 02 8 0 75 17 G 03 2 0 0 98 T 04 79 1 1 19 A 05 8 72 14 6 C 06 17 3 72 8 G 07 6 9 72 13 G 08 40 24 10 26 w 09 29 29 17 25 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RGL2:M0821_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KNAT6/M0840_1.02/CISBP XX ID KNAT6:M0840_1.02:CISBP XX NA KNAT6 XX DE KNAT6 XX OS Arabidopsis thaliana XX BF 11162; XX P0 A C G T 01 39 17 22 22 a 02 20 31 34 15 s 03 34 38 13 15 m 04 15 30 13 42 y 05 12 0 81 7 G 06 8 0 0 92 T 07 10 78 4 8 C 08 59 7 14 20 a 09 29 29 20 22 m 10 29 24 20 27 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KNAT6:M0840_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HB-1/M0841_1.02/CISBP XX ID HB-1:M0841_1.02:CISBP XX NA HB-1 XX DE HB-1 XX OS Arabidopsis thaliana XX BF 11163; XX P0 A C G T 01 23 22 18 37 t 02 21 11 53 15 g 03 20 18 2 60 t 04 4 0 19 77 T 05 8 73 10 9 C 06 41 8 13 38 w 07 29 5 3 63 w 08 30 27 28 15 v XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HB-1:M0841_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EDT1/M0842_1.02/CISBP XX ID EDT1:M0842_1.02:CISBP XX NA EDT1 XX DE EDT1 XX OS Arabidopsis thaliana XX BF 11164; XX P0 A C G T 01 21 39 12 28 y 02 58 26 7 9 m 03 49 3 7 41 w 04 6 1 1 92 T 05 32 5 3 60 w 06 92 3 4 1 A 07 83 4 2 11 A 08 13 3 0 84 T 09 7 3 76 14 G 10 22 50 5 23 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EDT1:M0842_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB6/M0843_1.02/CISBP XX ID ATHB6:M0843_1.02:CISBP XX NA ATHB6 XX DE ATHB6 XX OS Arabidopsis thaliana XX BF 11165; XX P0 A C G T 01 18 25 29 28 b 02 15 53 8 24 c 03 75 9 7 9 A 04 89 7 0 4 A 05 2 1 0 97 T 06 35 31 13 21 m 07 92 1 4 3 A 08 11 6 13 70 T 09 23 11 27 39 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB6:M0843_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB22/M0844_1.02/CISBP XX ID ATHB22:M0844_1.02:CISBP XX NA ATHB22 XX DE ATHB22 XX OS Arabidopsis thaliana XX BF 11166; XX P0 A C G T 01 23 22 23 32 t 02 36 19 18 27 w 03 70 10 10 10 A 04 16 5 5 74 T 05 83 2 2 13 A 06 90 0 10 0 A 07 0 0 0 100 T 08 50 0 0 50 w 09 22 13 2 63 t 10 59 7 7 27 w 11 34 15 15 36 w 12 29 20 20 31 w 13 23 23 22 32 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB22:M0844_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-4/M0845_1.02/CISBP XX ID ATHB-4:M0845_1.02:CISBP XX NA ATHB-4 XX DE ATHB-4 XX OS Arabidopsis thaliana XX BF 11167; XX P0 A C G T 01 17 35 27 21 s 02 11 48 3 38 y 03 77 7 3 13 A 04 79 9 5 7 A 05 11 4 8 77 T 06 13 59 14 14 c 07 75 6 8 11 A 08 23 13 11 53 t 09 22 20 20 38 t 10 30 18 29 23 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-4:M0845_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB7/M0846_1.02/CISBP XX ID ATHB7:M0846_1.02:CISBP XX NA ATHB7 XX DE ATHB7 XX OS Arabidopsis thaliana XX BF 11168; XX P0 A C G T 01 15 34 15 36 y 02 3 83 3 11 C 03 100 0 0 0 A 04 100 0 0 0 A 05 0 0 0 100 T 06 0 100 0 0 C 07 100 0 0 0 A 08 29 0 0 71 W 09 18 10 19 53 t 10 22 23 33 22 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB7:M0846_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT3.1/M0847_1.02/CISBP XX ID HAT3.1:M0847_1.02:CISBP XX NA HAT3.1 XX DE HAT3.1 XX OS Arabidopsis thaliana XX BF 11169; XX P0 A C G T 01 16 33 27 24 s 02 9 16 7 68 T 03 46 9 36 9 r 04 44 37 2 17 m 05 80 12 0 8 A 06 9 82 1 8 C 07 8 63 13 16 c 08 31 24 21 24 a 09 26 28 19 27 h 10 23 27 22 28 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT3.1:M0847_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT3/M0848_1.02/CISBP XX ID HAT3:M0848_1.02:CISBP XX NA HAT3 XX DE HAT3 XX OS Arabidopsis thaliana XX BF 11170; XX P0 A C G T 01 13 35 34 18 s 02 6 54 3 37 y 03 85 7 1 7 A 04 86 6 3 5 A 05 5 6 0 89 T 06 11 76 6 7 C 07 82 3 6 9 A 08 33 15 12 40 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT3:M0848_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-12/M0849_1.02/CISBP XX ID ATHB-12:M0849_1.02:CISBP XX NA ATHB-12 XX DE ATHB-12 XX OS Arabidopsis thaliana XX BF 8867; XX P0 A C G T 01 10 18 47 25 k 02 32 19 8 41 w 03 63 4 2 31 w 04 40 10 3 47 w 05 33 16 1 50 w 06 50 1 16 33 w 07 48 3 9 40 w 08 31 2 4 63 w 09 41 8 18 33 w 10 26 47 18 9 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-12:M0849_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANL2/M0850_1.02/CISBP XX ID ANL2:M0850_1.02:CISBP XX NA ANL2 XX DE ANL2 XX OS Arabidopsis thaliana XX BF 11171; XX P0 A C G T 01 31 23 23 23 a 02 17 16 17 50 t 03 67 21 6 6 a 04 92 0 0 8 A 05 0 0 0 100 T 06 26 0 0 74 W 07 100 0 0 0 A 08 92 0 0 8 A 09 2 2 2 94 T 10 8 8 76 8 G 11 32 30 19 19 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANL2:M0850_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT1/M0851_1.02/CISBP XX ID HAT1:M0851_1.02:CISBP XX NA HAT1 XX DE HAT1 XX OS Arabidopsis thaliana XX BF 11172; XX P0 A C G T 01 15 37 33 15 s 02 6 51 7 36 y 03 100 0 0 0 A 04 100 0 0 0 A 05 0 0 0 100 T 06 0 100 0 0 C 07 100 0 0 0 A 08 10 0 0 90 T 09 10 10 29 51 k 10 35 18 29 18 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT1:M0851_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATML1/M0852_1.02/CISBP XX ID ATML1:M0852_1.02:CISBP XX NA ATML1 XX DE ATML1 XX OS Arabidopsis thaliana XX BF 11173; XX P0 A C G T 01 32 28 19 21 m 02 32 17 22 29 w 03 14 15 10 61 t 04 32 19 14 35 w 05 63 13 15 9 a 06 43 20 12 25 a 07 7 17 14 62 t 08 30 11 48 11 r 09 18 39 18 25 y 10 22 26 30 22 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATML1:M0852_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATWOX13/M0853_1.02/CISBP XX ID ATWOX13:M0853_1.02:CISBP XX NA ATWOX13 XX DE ATWOX13 XX OS Arabidopsis thaliana XX BF 8899; XX P0 A C G T 01 0 9 9 82 T 02 0 85 0 15 C 03 100 0 0 0 A 04 100 0 0 0 A 05 0 0 0 100 T 06 7 80 0 13 C 07 93 0 0 7 A 08 60 10 20 10 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATWOX13:M0853_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB16/M0854_1.02/CISBP XX ID ATHB16:M0854_1.02:CISBP XX NA ATHB16 XX DE ATHB16 XX OS Arabidopsis thaliana XX BF 11174; XX P0 A C G T 01 7 21 0 72 T 02 100 0 0 0 A 03 100 0 0 0 A 04 0 0 0 100 T 05 54 32 14 0 m 06 100 0 0 0 A 07 0 0 0 100 T 08 7 0 7 86 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB16:M0854_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KNAT3/M0855_1.02/CISBP XX ID KNAT3:M0855_1.02:CISBP XX NA KNAT3 XX DE KNAT3 XX OS Arabidopsis thaliana XX BF 11175; XX P0 A C G T 01 39 16 23 22 a 02 19 35 33 13 s 03 29 46 15 10 m 04 13 24 17 46 t 05 8 0 89 3 G 06 3 0 0 97 T 07 6 87 3 4 C 08 55 14 18 13 a 09 25 30 19 26 h 10 28 24 22 26 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KNAT3:M0855_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os03g03164/M1107_1.02/CISBP XX ID LOC_Os03g03164:M1107_1.02:CISBP XX NA LOC_Os03g03164 XX DE LOC_Os03g03164 XX OS Oryza sativa XX BF 11255; XX P0 A C G T 01 28 28 22 22 m 02 25 25 18 32 t 03 25 10 48 17 g 04 22 29 2 47 y 05 22 38 19 21 c 06 34 24 22 20 a 07 28 23 26 23 r 08 26 23 27 24 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os03g03164:M1107_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os09g35910/M1108_1.02/CISBP XX ID LOC_Os09g35910:M1108_1.02:CISBP XX NA LOC_Os09g35910 XX DE LOC_Os09g35910 XX OS Oryza sativa XX BF 11256; XX P0 A C G T 01 30 22 25 23 r 02 28 23 23 26 w 03 11 37 19 33 y 04 5 64 2 29 y 05 88 5 2 5 A 06 96 3 0 1 A 07 1 0 0 99 T 08 1 96 1 2 C 09 79 3 10 8 A 10 40 17 12 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os09g35910:M1108_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Os02g0706600/M1116_1.02/CISBP XX ID Os02g0706600:M1116_1.02:CISBP XX NA Os02g0706600 XX DE Os02g0706600 XX OS Oryza sativa XX BF 11263; XX P0 A C G T 01 25 29 25 21 v 02 21 32 19 28 y 03 19 11 3 67 t 04 69 7 14 10 A 05 75 11 4 10 A 06 15 20 15 50 t 07 18 38 19 25 y 08 30 26 22 22 m 09 26 30 21 23 m 10 25 23 28 24 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Os02g0706600:M1116_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PRH/M1167_1.02/CISBP XX ID PRH:M1167_1.02:CISBP XX NA PRH XX DE PRH XX OS Petroselinum crispum XX BF 11293; XX P0 A C G T 01 99 0 0 1 A 02 0 0 0 100 T 03 100 0 0 0 A 04 0 0 0 100 T 05 100 0 0 0 A 06 14 1 0 85 T 07 50 0 0 50 w 08 80 0 0 20 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PRH:M1167_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_gwp_gw1.C_70211/M1195_1.02/CISBP XX ID estExt_gwp_gw1.C_70211:M1195_1.02:CISBP XX NA estExt_gwp_gw1.C_70211 XX DE estExt_gwp_gw1.C_70211 XX OS Physcomitrella patens XX BF 11321; XX P0 A C G T 01 15 46 11 28 y 02 66 18 16 0 a 03 89 11 0 0 A 04 0 0 0 100 T 05 31 33 18 18 m 06 93 0 7 0 A 07 13 14 13 60 t 08 22 11 31 36 k 09 23 26 30 21 s 10 23 24 33 20 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_gwp_gw1.C_70211:M1195_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GRMZM2G038252/M1209_1.02/CISBP XX ID GRMZM2G038252:M1209_1.02:CISBP XX NA GRMZM2G038252 XX DE GRMZM2G038252 XX OS Zea mays XX BF 11334; XX P0 A C G T 01 11 23 16 50 t 02 6 77 0 17 C 03 99 1 0 0 A 04 98 0 2 0 A 05 1 0 0 99 T 06 0 70 0 30 Y 07 95 1 0 4 A 08 55 10 21 14 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GRMZM2G038252:M1209_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GRMZM2G087741/M1210_1.02/CISBP XX ID GRMZM2G087741:M1210_1.02:CISBP XX NA GRMZM2G087741 XX DE GRMZM2G087741 XX OS Zea mays XX BF 11335; XX P0 A C G T 01 35 27 19 19 m 02 18 25 40 17 s 03 0 0 0 100 T 04 0 9 91 0 G 05 100 0 0 0 A 06 0 91 0 9 C 07 46 0 54 0 r 08 9 0 46 45 k 09 6 74 14 6 C 10 37 15 15 33 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GRMZM2G087741:M1210_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GRMZM2G135447/M1211_1.02/CISBP XX ID GRMZM2G135447:M1211_1.02:CISBP XX NA GRMZM2G135447 XX DE GRMZM2G135447 XX OS Zea mays XX BF 11336; XX P0 A C G T 01 10 34 54 2 s 02 35 56 3 6 m 03 4 32 4 60 y 04 0 0 100 0 G 05 3 0 0 97 T 06 0 99 1 0 C 07 94 0 4 2 A 08 29 33 12 26 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GRMZM2G135447:M1211_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Q1T448/M1215_1.02/CISBP XX ID Q1T448:M1215_1.02:CISBP XX NA Q1T448 XX DE Q1T448 XX OS Medicago truncatula XX BF 11340; XX P0 A C G T 01 25 26 23 26 h 02 24 29 20 27 y 03 37 14 24 25 w 04 25 20 13 42 t 05 23 15 13 49 t 06 70 7 2 21 A 07 14 12 62 12 g 08 24 16 23 37 t 09 33 42 10 15 m 10 18 41 13 28 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Q1T448:M1215_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD4/M1274_1.02/CISBP XX ID LBD4:M1274_1.02:CISBP XX NA LBD4 XX DE LBD4 XX OS Arabidopsis thaliana XX BF 11387; XX P0 A C G T 01 39 20 29 12 r 02 47 11 25 17 a 03 25 35 14 26 h 04 19 37 37 7 s 05 7 76 14 3 C 06 6 14 78 2 G 07 9 23 64 4 g 08 21 30 36 13 s 09 28 18 37 17 r 10 30 18 29 23 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD4:M1274_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC gw1.238.28.1/M1275_1.02/CISBP XX ID gw1.238.28.1:M1275_1.02:CISBP XX NA gw1.238.28.1 XX DE gw1.238.28.1 XX OS Physcomitrella patens XX BF 11388; XX P0 A C G T 01 40 18 25 17 a 02 41 15 18 26 w 03 35 16 17 32 w 04 29 18 13 40 w 05 18 28 16 38 y 06 27 30 34 9 v 07 13 60 13 14 c 08 0 5 95 0 G 09 3 26 63 8 s 10 30 21 23 26 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=gw1.238.28.1:M1275_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT-1/M1276_1.02/CISBP XX ID GT-1:M1276_1.02:CISBP XX NA GT-1 XX DE GT-1 XX OS Arabidopsis thaliana XX BF 11389; XX P0 A C G T 01 0 15 65 20 g 02 0 7 0 93 T 03 3 0 0 97 T 04 100 0 0 0 A 05 97 3 0 0 A 06 3 97 0 0 C 07 0 94 0 6 C 08 62 17 13 8 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT-1:M1276_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G25990/M1277_1.02/CISBP XX ID AT3G25990:M1277_1.02:CISBP XX NA AT3G25990 XX DE AT3G25990 XX OS Arabidopsis thaliana XX BF 11390; XX P0 A C G T 01 18 28 19 35 y 02 23 16 12 49 t 03 51 10 17 22 a 04 88 0 0 12 A 05 6 74 6 14 C 06 14 45 9 32 y 07 32 28 21 19 m 08 25 25 26 24 r 09 31 22 25 22 a 10 24 26 30 20 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G25990:M1277_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G47660/M1278_1.02/CISBP XX ID AT5G47660:M1278_1.02:CISBP XX NA AT5G47660 XX DE AT5G47660 XX OS Arabidopsis thaliana XX BF 11391; XX P0 A C G T 01 50 0 0 50 w 02 0 1 0 99 T 03 0 0 0 100 T 04 99 0 0 1 A 05 0 100 0 0 C 06 0 99 0 1 C 07 0 1 99 0 G 08 0 50 0 50 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G47660:M1278_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002876896.1/M1282_1.02/CISBP XX ID XM_002876896.1:M1282_1.02:CISBP XX NA XM_002876896.1 XX DE XM_002876896.1 XX OS Arabidopsis lyrata XX BF 11414; XX P0 A C G T 01 21 22 36 21 g 02 21 21 37 21 g 03 19 29 19 33 y 04 19 20 10 51 t 05 76 14 5 5 A 06 100 0 0 0 A 07 0 100 0 0 C 08 0 100 0 0 C 09 4 89 3 4 C 10 4 88 4 4 C 11 6 55 5 34 y 12 25 15 24 36 t 13 20 20 20 40 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002876896.1:M1282_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GSVIVG00007522001/M1283_1.02/CISBP XX ID GSVIVG00007522001:M1283_1.02:CISBP XX NA GSVIVG00007522001 XX DE GSVIVG00007522001 XX OS Vitis vinifera XX BF 11415; XX P0 A C G T 01 0 0 100 0 G 02 0 0 0 100 T 03 0 0 0 100 T 04 100 0 0 0 A 05 100 0 0 0 A 06 0 100 0 0 C 07 0 66 1 33 y 08 50 25 25 0 v XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GSVIVG00007522001:M1283_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os02g01380/M1284_1.02/CISBP XX ID LOC_Os02g01380:M1284_1.02:CISBP XX NA LOC_Os02g01380 XX DE LOC_Os02g01380 XX OS Oryza sativa XX BF 11416; XX P0 A C G T 01 48 16 20 16 a 02 30 9 18 43 w 03 48 4 3 45 w 04 21 5 10 64 t 05 0 4 0 96 T 06 6 3 1 90 T 07 97 1 0 2 A 08 3 94 0 3 C 09 14 45 9 32 y 10 25 19 42 14 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os02g01380:M1284_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os04g40930/M1286_1.02/CISBP XX ID LOC_Os04g40930:M1286_1.02:CISBP XX NA LOC_Os04g40930 XX DE LOC_Os04g40930 XX OS Oryza sativa XX BF 11417; XX P0 A C G T 01 10 27 13 50 y 02 18 7 4 71 T 03 75 3 12 10 A 04 95 4 0 1 A 05 1 96 0 3 C 06 3 65 2 30 y 07 38 31 17 14 m 08 23 25 29 23 s 09 42 16 26 16 r 10 19 27 39 15 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os04g40930:M1286_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002892704.1/M1287_1.02/CISBP XX ID XM_002892704.1:M1287_1.02:CISBP XX NA XM_002892704.1 XX DE XM_002892704.1 XX OS Arabidopsis lyrata XX BF 11418; XX P0 A C G T 01 0 0 100 0 G 02 0 0 100 0 G 03 0 0 0 100 T 04 1 0 0 99 T 05 99 0 1 0 A 06 99 0 0 1 A 07 0 100 0 0 C 08 0 100 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002892704.1:M1287_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 29929.m004704/M1290_1.02/CISBP XX ID 29929.m004704:M1290_1.02:CISBP XX NA 29929.m004704 XX DE 29929.m004704 XX OS Ricinus communis XX BF 11421; XX P0 A C G T 01 13 17 37 33 k 02 24 12 46 18 g 03 17 17 49 17 g 04 18 13 17 52 t 05 24 20 9 47 t 06 47 9 20 24 a 07 52 17 12 19 a 08 17 50 16 17 c 09 17 46 12 25 c 10 33 37 17 13 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=29929.m004704:M1290_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC cassava13991.valid.m1/M1291_1.02/CISBP XX ID cassava13991.valid.m1:M1291_1.02:CISBP XX NA cassava13991.valid.m1 XX DE cassava13991.valid.m1 XX OS Manihot esculenta XX BF 11422; XX P0 A C G T 01 18 27 20 35 y 02 25 18 16 41 t 03 46 11 18 25 a 04 90 3 0 7 A 05 0 85 1 14 C 06 14 50 10 26 y 07 29 32 20 19 m 08 23 29 24 24 c 09 29 24 26 21 r 10 24 29 29 18 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=cassava13991.valid.m1:M1291_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Glyma11g37390.1/M1292_1.02/CISBP XX ID Glyma11g37390.1:M1292_1.02:CISBP XX NA Glyma11g37390.1 XX DE Glyma11g37390.1 XX OS Glycine max XX BF 11423; XX P0 A C G T 01 12 29 17 42 y 02 19 13 10 58 t 03 64 0 19 17 a 04 100 0 0 0 A 05 5 95 0 0 C 06 0 69 4 27 Y 07 33 33 21 13 m 08 23 28 27 22 s 09 33 20 32 15 r 10 18 28 41 13 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Glyma11g37390.1:M1292_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Medtr3g103160.1/M1293_1.02/CISBP XX ID Medtr3g103160.1:M1293_1.02:CISBP XX NA Medtr3g103160.1 XX DE Medtr3g103160.1 XX OS Medicago truncatula XX BF 11424; XX P0 A C G T 01 13 27 14 46 y 02 17 12 7 64 t 03 66 7 15 12 a 04 92 5 0 3 A 05 2 93 0 5 C 06 6 58 3 33 y 07 35 30 22 13 m 08 24 26 26 24 s 09 35 19 28 18 r 10 21 27 33 19 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Medtr3g103160.1:M1293_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MDP0000164819/M1294_1.02/CISBP XX ID MDP0000164819:M1294_1.02:CISBP XX NA MDP0000164819 XX DE MDP0000164819 XX OS Malus x domestica XX BF 11425; XX P0 A C G T 01 9 25 12 54 y 02 11 6 3 80 T 03 80 2 11 7 A 04 98 2 0 0 A 05 0 98 0 2 C 06 2 71 1 26 Y 07 43 30 17 10 m 08 23 26 26 25 s 09 41 15 30 14 r 10 18 26 40 16 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MDP0000164819:M1294_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK00738.1/M1302_1.02/CISBP XX ID PK00738.1:M1302_1.02:CISBP XX NA PK00738.1 XX DE PK00738.1 XX OS Cannabis sativa XX BF 11432; XX P0 A C G T 01 33 17 17 33 w 02 28 21 24 27 w 03 23 28 11 38 y 04 28 9 58 5 r 05 1 1 96 2 G 06 91 2 6 1 A 07 1 2 0 97 T 08 62 11 11 16 a 09 57 5 23 15 a 10 22 22 36 20 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK00738.1:M1302_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK02532.1/M1303_1.02/CISBP XX ID PK02532.1:M1303_1.02:CISBP XX NA PK02532.1 XX DE PK02532.1 XX OS Cannabis sativa XX BF 11433; XX P0 A C G T 01 25 25 25 25 n 02 100 0 0 0 A 03 0 0 100 0 G 04 100 0 0 0 A 05 0 0 0 100 T 06 100 0 0 0 A 07 0 0 0 100 T 08 0 0 0 100 T 09 50 0 0 50 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK02532.1:M1303_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK06103.1/M1304_1.02/CISBP XX ID PK06103.1:M1304_1.02:CISBP XX NA PK06103.1 XX DE PK06103.1 XX OS Cannabis sativa XX BF 11434; XX P0 A C G T 01 0 80 0 20 C 02 0 0 0 100 T 03 100 0 0 0 A 04 0 0 100 0 G 05 0 0 100 0 G 06 0 0 100 0 G 07 0 100 0 0 C 08 80 0 0 20 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK06103.1:M1304_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK06182.1/M1305_1.02/CISBP XX ID PK06182.1:M1305_1.02:CISBP XX NA PK06182.1 XX DE PK06182.1 XX OS Cannabis sativa XX BF 11435; XX P0 A C G T 01 25 11 12 52 t 02 6 8 3 83 T 03 99 0 0 1 A 04 2 96 1 1 C 05 1 98 0 1 C 06 7 1 0 92 T 07 96 0 0 4 A 08 4 96 0 0 C 09 1 90 1 8 C 10 20 19 32 29 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK06182.1:M1305_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK08316.1/M1306_1.02/CISBP XX ID PK08316.1:M1306_1.02:CISBP XX NA PK08316.1 XX DE PK08316.1 XX OS Cannabis sativa XX BF 11436; XX P0 A C G T 01 29 20 23 28 w 02 41 15 18 26 w 03 52 17 15 16 a 04 56 12 20 12 a 05 25 4 13 58 w 06 88 0 5 7 A 07 10 5 5 80 T 08 9 80 7 4 C 09 19 21 18 42 t 10 26 22 24 28 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK08316.1:M1306_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK10342.1/M1307_1.02/CISBP XX ID PK10342.1:M1307_1.02:CISBP XX NA PK10342.1 XX DE PK10342.1 XX OS Cannabis sativa XX BF 11437; XX P0 A C G T 01 16 26 58 0 s 02 0 0 100 0 G 03 65 30 0 5 m 04 100 0 0 0 A 05 0 0 0 100 T 06 13 87 0 0 C 07 0 0 0 100 T 08 27 13 7 53 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK10342.1:M1307_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK14402.1/M1308_1.02/CISBP XX ID PK14402.1:M1308_1.02:CISBP XX NA PK14402.1 XX DE PK14402.1 XX OS Cannabis sativa XX BF 11438; XX P0 A C G T 01 30 19 31 20 r 02 24 12 22 42 t 03 58 5 14 23 a 04 0 0 89 11 G 05 100 0 0 0 A 06 0 0 0 100 T 07 0 10 0 90 T 08 0 100 0 0 C 09 5 65 25 5 c 10 12 22 44 22 g 11 20 30 20 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK14402.1:M1308_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK17526.1/M1309_1.02/CISBP XX ID PK17526.1:M1309_1.02:CISBP XX NA PK17526.1 XX DE PK17526.1 XX OS Cannabis sativa XX BF 11439; XX P0 A C G T 01 29 20 20 31 w 02 12 13 12 63 t 03 0 0 100 0 G 04 0 0 100 0 G 05 100 0 0 0 A 06 0 0 0 100 T 07 100 0 0 0 A 08 72 0 9 19 A 09 16 24 35 25 g 10 32 21 34 13 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK17526.1:M1309_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK19779.1/M1310_1.02/CISBP XX ID PK19779.1:M1310_1.02:CISBP XX NA PK19779.1 XX DE PK19779.1 XX OS Cannabis sativa XX BF 11440; XX P0 A C G T 01 26 24 24 26 w 02 37 18 20 25 a 03 11 10 54 25 k 04 72 4 14 10 A 05 0 1 0 99 T 06 26 21 14 39 w 07 11 74 7 8 C 08 20 30 23 27 y 09 25 27 26 22 v 10 25 27 22 26 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK19779.1:M1310_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK23829.1/M1311_1.02/CISBP XX ID PK23829.1:M1311_1.02:CISBP XX NA PK23829.1 XX DE PK23829.1 XX OS Cannabis sativa XX BF 11441; XX P0 A C G T 01 19 33 0 48 y 02 3 0 97 0 G 03 0 0 100 0 G 04 100 0 0 0 A 05 0 0 0 100 T 06 100 0 0 0 A 07 78 0 9 13 A 08 4 35 35 26 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK23829.1:M1311_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK27213.1/M1312_1.02/CISBP XX ID PK27213.1:M1312_1.02:CISBP XX NA PK27213.1 XX DE PK27213.1 XX OS Cannabis sativa XX BF 11442; XX P0 A C G T 01 28 17 19 36 w 02 28 25 23 24 a 03 28 24 21 27 w 04 30 16 38 16 r 05 5 4 85 6 G 06 80 6 9 5 A 07 5 4 0 91 T 08 58 12 12 18 a 09 52 8 23 17 a 10 20 25 35 20 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK27213.1:M1312_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK28565.1/M1313_1.02/CISBP XX ID PK28565.1:M1313_1.02:CISBP XX NA PK28565.1 XX DE PK28565.1 XX OS Cannabis sativa XX BF 11443; XX P0 A C G T 01 29 0 61 10 r 02 71 0 15 14 A 03 0 88 0 12 C 04 35 42 21 2 m 05 0 0 100 0 G 06 0 0 5 95 T 07 0 0 0 100 T 08 81 0 16 3 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK28565.1:M1313_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK29550.1/M1314_1.02/CISBP XX ID PK29550.1:M1314_1.02:CISBP XX NA PK29550.1 XX DE PK29550.1 XX OS Cannabis sativa XX BF 11444; XX P0 A C G T 01 27 22 24 27 w 02 24 28 14 34 y 03 30 9 54 7 r 04 7 3 86 4 G 05 84 5 7 4 A 06 5 3 3 89 T 07 57 13 12 18 a 08 54 5 24 17 a 09 21 24 35 20 g 10 25 20 36 19 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK29550.1:M1314_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HRS1/M1315_1.02/CISBP XX ID HRS1:M1315_1.02:CISBP XX NA HRS1 XX DE HRS1 XX OS Arabidopsis thaliana XX BF 11445; XX P0 A C G T 01 20 28 22 30 y 02 30 12 48 10 r 03 0 0 100 0 G 04 79 0 8 13 A 05 90 0 0 10 A 06 1 0 0 99 T 07 5 95 0 0 C 08 6 8 0 86 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HRS1:M1315_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRFL5/M1316_1.02/CISBP XX ID TRFL5:M1316_1.02:CISBP XX NA TRFL5 XX DE TRFL5 XX OS Arabidopsis thaliana XX BF 11446; XX P0 A C G T 01 13 40 14 33 y 02 0 0 0 100 T 03 100 0 0 0 A 04 0 0 100 0 G 05 0 0 100 0 G 06 0 0 100 0 G 07 0 100 0 0 C 08 62 0 15 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRFL5:M1316_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EPR1/M1317_1.02/CISBP XX ID EPR1:M1317_1.02:CISBP XX NA EPR1 XX DE EPR1 XX OS Arabidopsis thaliana XX BF 11447; XX P0 A C G T 01 52 12 19 17 a 02 5 1 92 2 G 03 98 0 1 1 A 04 1 1 0 98 T 05 72 8 1 19 A 06 7 18 8 67 t 07 15 8 9 68 t 08 24 14 9 53 t 09 29 19 16 36 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EPR1:M1317_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G19000/M1318_1.02/CISBP XX ID AT1G19000:M1318_1.02:CISBP XX NA AT1G19000 XX DE AT1G19000 XX OS Arabidopsis thaliana XX BF 11448; XX P0 A C G T 01 35 14 14 37 w 02 30 17 24 29 w 03 16 32 9 43 y 04 25 9 61 5 r 05 2 2 95 1 G 06 92 3 4 1 A 07 3 1 0 96 T 08 65 10 11 14 a 09 59 4 22 15 a 10 26 22 35 17 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G19000:M1318_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB3/M1319_1.02/CISBP XX ID MYB3:M1319_1.02:CISBP XX NA MYB3 XX DE MYB3 XX OS Arabidopsis thaliana XX BF 11449; XX P0 A C G T 01 28 18 28 26 d 02 6 6 82 6 G 03 2 2 77 19 G 04 0 0 0 100 T 05 93 0 0 7 A 06 0 0 100 0 G 07 0 0 100 0 G 08 0 0 0 100 T 09 66 7 20 7 a 10 27 19 35 19 r 11 31 23 23 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB3:M1319_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G25550/M1320_1.02/CISBP XX ID AT1G25550:M1320_1.02:CISBP XX NA AT1G25550 XX DE AT1G25550 XX OS Arabidopsis thaliana XX BF 11450; XX P0 A C G T 01 30 20 23 27 w 02 64 7 13 16 a 03 3 2 75 20 G 04 95 1 4 0 A 05 3 0 0 97 T 06 18 14 6 62 t 07 0 98 0 2 C 08 12 40 20 28 y 09 24 28 26 22 s 10 21 27 21 31 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G25550:M1320_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G68670/M1321_1.02/CISBP XX ID AT1G68670:M1321_1.02:CISBP XX NA AT1G68670 XX DE AT1G68670 XX OS Arabidopsis thaliana XX BF 11451; XX P0 A C G T 01 29 22 27 22 r 02 24 24 26 26 k 03 32 21 31 16 r 04 7 8 76 9 G 05 49 12 15 24 a 06 95 0 3 2 A 07 8 6 0 86 T 08 23 59 8 10 c 09 22 17 12 49 t 10 26 22 21 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G68670:M1321_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G74840/M1322_1.02/CISBP XX ID AT1G74840:M1322_1.02:CISBP XX NA AT1G74840 XX DE AT1G74840 XX OS Arabidopsis thaliana XX BF 11452; XX P0 A C G T 01 23 23 23 31 t 02 18 45 19 18 c 03 9 63 9 19 c 04 10 0 90 0 G 05 0 0 100 0 G 06 100 0 0 0 A 07 0 0 0 100 T 08 92 8 0 0 A 09 37 2 2 59 w 10 7 80 7 6 C 11 25 33 16 26 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G74840:M1322_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G01060/M1323_1.02/CISBP XX ID AT2G01060:M1323_1.02:CISBP XX NA AT2G01060 XX DE AT2G01060 XX OS Arabidopsis thaliana XX BF 11453; XX P0 A C G T 01 37 15 18 30 w 02 64 6 7 23 a 03 2 1 77 20 G 04 98 0 2 0 A 05 0 0 0 100 T 06 16 10 20 54 t 07 0 99 0 1 C 08 2 45 24 29 y 09 24 30 20 26 y 10 23 27 13 37 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G01060:M1323_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR14/M1324_1.02/CISBP XX ID ARR14:M1324_1.02:CISBP XX NA ARR14 XX DE ARR14 XX OS Arabidopsis thaliana XX BF 8866; XX P0 A C G T 01 38 18 22 22 a 02 15 31 33 21 s 03 29 47 14 10 m 04 33 8 54 5 r 05 43 2 20 35 w 06 94 0 0 6 A 07 1 0 0 99 T 08 7 89 0 4 C 09 14 13 8 65 t 10 26 20 15 39 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR14:M1324_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G04030/M1325_1.02/CISBP XX ID AT3G04030:M1325_1.02:CISBP XX NA AT3G04030 XX DE AT3G04030 XX OS Arabidopsis thaliana XX BF 11454; XX P0 A C G T 01 38 19 18 25 w 02 10 7 56 27 k 03 79 2 15 4 A 04 0 0 0 100 T 05 17 12 22 49 t 06 3 88 4 5 C 07 8 36 28 28 b 08 21 31 25 23 c 09 23 27 23 27 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G04030:M1325_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G13040/M1326_1.02/CISBP XX ID AT3G13040:M1326_1.02:CISBP XX NA AT3G13040 XX DE AT3G13040 XX OS Arabidopsis thaliana XX BF 11455; XX P0 A C G T 01 26 22 27 25 r 02 34 18 20 28 w 03 53 10 13 24 a 04 7 3 58 32 k 05 90 0 9 1 A 06 1 0 0 99 T 07 18 19 23 40 t 08 1 92 3 4 C 09 7 38 25 30 y 10 24 29 24 23 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G13040:M1326_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR1/M1327_1.02/CISBP XX ID ARR1:M1327_1.02:CISBP XX NA ARR1 XX DE ARR1 XX OS Arabidopsis thaliana XX BF 7490; XX P0 A C G T 01 41 17 20 22 a 02 17 29 34 20 s 03 30 46 14 10 m 04 31 8 56 5 r 05 42 3 23 32 w 06 97 0 0 3 A 07 2 0 0 98 T 08 6 90 0 4 C 09 14 16 9 61 t 10 26 19 18 37 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR1:M1327_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G24120/M1328_1.02/CISBP XX ID AT3G24120:M1328_1.02:CISBP XX NA AT3G24120 XX DE AT3G24120 XX OS Arabidopsis thaliana XX BF 11456; XX P0 A C G T 01 28 21 20 31 w 02 37 18 17 28 w 03 10 10 46 34 k 04 78 1 16 5 A 05 0 0 0 100 T 06 18 12 20 50 t 07 7 79 6 8 C 08 10 34 28 28 b 09 22 28 25 25 s 10 24 27 22 27 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G24120:M1328_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB94/M1329_1.02/CISBP XX ID MYB94:M1329_1.02:CISBP XX NA MYB94 XX DE MYB94 XX OS Arabidopsis thaliana XX BF 11457; XX P0 A C G T 01 34 0 33 33 d 02 99 0 1 0 A 03 0 100 0 0 C 04 1 99 0 0 C 05 0 0 100 0 G 06 0 0 99 1 G 07 0 0 0 100 T 08 40 20 0 40 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB94:M1329_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB77/M1330_1.02/CISBP XX ID AtMYB77:M1330_1.02:CISBP XX NA AtMYB77 XX DE AtMYB77 XX OS Arabidopsis thaliana XX BF 10005; XX P0 A C G T 01 23 0 73 4 G 02 48 4 48 0 r 03 0 96 0 4 C 04 33 17 50 0 r 05 0 0 100 0 G 06 0 0 4 96 T 07 0 0 0 100 T 08 56 0 44 0 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB77:M1330_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR2/M1331_1.02/CISBP XX ID ARR2:M1331_1.02:CISBP XX NA ARR2 XX DE ARR2 XX OS Arabidopsis thaliana XX BF 7491; XX P0 A C G T 01 17 27 39 17 s 02 34 57 5 4 m 03 21 0 79 0 G 04 48 0 21 31 w 05 100 0 0 0 A 06 0 0 0 100 T 07 0 100 0 0 C 08 0 0 0 100 T 09 15 8 8 69 T 10 21 20 20 39 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR2:M1331_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC APRR2/M1332_1.02/CISBP XX ID APRR2:M1332_1.02:CISBP XX NA APRR2 XX DE APRR2 XX OS Arabidopsis thaliana XX BF 11458; XX P0 A C G T 01 30 18 30 22 r 02 16 38 25 21 c 03 27 12 53 8 r 04 30 22 20 28 w 05 63 5 12 20 a 06 87 2 1 10 A 07 11 4 0 85 T 08 14 71 7 8 C 09 15 28 13 44 y 10 34 22 24 20 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=APRR2:M1332_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB98/M1333_1.02/CISBP XX ID MYB98:M1333_1.02:CISBP XX NA MYB98 XX DE MYB98 XX OS Arabidopsis thaliana XX BF 11459; XX P0 A C G T 01 29 20 21 30 w 02 12 12 24 52 t 03 43 52 3 2 m 04 0 91 9 0 C 05 0 0 100 0 G 06 0 0 0 100 T 07 0 0 0 100 T 08 100 0 0 0 A 09 4 86 5 5 C 10 32 23 32 13 r 11 23 22 32 23 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB98:M1333_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtPHR1/M1334_1.02/CISBP XX ID AtPHR1:M1334_1.02:CISBP XX NA AtPHR1 XX DE AtPHR1 XX OS Arabidopsis thaliana XX BF 11460; XX P0 A C G T 01 33 18 23 26 w 02 53 10 13 24 a 03 9 3 52 36 k 04 83 1 15 1 A 05 3 0 0 97 T 06 18 20 26 36 k 07 0 99 0 1 C 08 5 39 29 27 b 09 23 28 25 24 c 10 22 27 21 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtPHR1:M1334_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATMYB4/M1335_1.02/CISBP XX ID ATMYB4:M1335_1.02:CISBP XX NA ATMYB4 XX DE ATMYB4 XX OS Arabidopsis thaliana XX BF 11461; XX P0 A C G T 01 25 4 67 4 r 02 1 0 77 22 G 03 0 1 0 99 T 04 57 1 3 39 w 05 3 0 97 0 G 06 2 2 78 18 G 07 1 0 0 99 T 08 32 7 54 7 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATMYB4:M1335_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G04760/M1336_1.02/CISBP XX ID AT5G04760:M1336_1.02:CISBP XX NA AT5G04760 XX DE AT5G04760 XX OS Arabidopsis thaliana XX BF 11462; XX P0 A C G T 01 15 35 15 35 y 02 36 8 30 26 d 03 0 0 100 0 G 04 100 0 0 0 A 05 0 0 0 100 T 06 91 9 0 0 A 07 100 0 0 0 A 08 10 9 71 10 G 09 9 10 71 10 G 10 18 28 17 37 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G04760:M1336_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G05090/M1337_1.02/CISBP XX ID AT5G05090:M1337_1.02:CISBP XX NA AT5G05090 XX DE AT5G05090 XX OS Arabidopsis thaliana XX BF 11463; XX P0 A C G T 01 34 22 22 22 a 02 25 26 5 44 y 03 83 2 2 13 A 04 0 0 100 0 G 05 100 0 0 0 A 06 0 0 0 100 T 07 29 32 0 39 h 08 0 78 0 22 C 09 3 3 72 22 G 10 30 20 30 20 r 11 32 23 22 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G05090:M1337_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB33/M1338_1.02/CISBP XX ID MYB33:M1338_1.02:CISBP XX NA MYB33 XX DE MYB33 XX OS Arabidopsis thaliana XX BF 11464; XX P0 A C G T 01 25 25 24 26 w 02 31 16 24 29 w 03 25 7 44 24 r 04 30 3 34 33 d 05 6 63 3 28 y 06 27 30 28 15 v 07 1 0 98 1 G 08 1 0 9 90 T 09 4 1 0 95 T 10 54 7 22 17 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB33:M1338_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G08520/M1339_1.02/CISBP XX ID AT5G08520:M1339_1.02:CISBP XX NA AT5G08520 XX DE AT5G08520 XX OS Arabidopsis thaliana XX BF 11465; XX P0 A C G T 01 25 25 21 29 y 02 28 15 42 15 r 03 4 3 89 4 G 04 78 8 12 2 A 05 1 1 0 98 T 06 54 13 15 18 a 07 50 8 25 17 r 08 21 24 37 18 g 09 25 21 34 20 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G08520:M1339_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN/M1340_1.02/CISBP XX ID KAN:M1340_1.02:CISBP XX NA KAN XX DE KAN XX OS Arabidopsis thaliana XX BF 8881; XX P0 A C G T 01 41 16 27 16 r 02 26 11 43 20 r 03 44 15 15 26 w 04 55 8 14 23 a 05 13 13 1 73 T 06 73 1 13 13 A 07 23 14 8 55 t 08 26 15 15 44 w 09 20 43 11 26 y 10 16 27 16 41 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN:M1340_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATMYR1/M1341_1.02/CISBP XX ID ATMYR1:M1341_1.02:CISBP XX NA ATMYR1 XX DE ATMYR1 XX OS Arabidopsis thaliana XX BF 11466; XX P0 A C G T 01 25 28 30 17 s 02 23 25 31 21 s 03 20 27 35 18 s 04 23 32 41 4 s 05 3 2 95 0 G 06 50 21 14 15 a 07 88 0 4 8 A 08 2 14 5 79 T 09 28 57 7 8 m 10 23 21 16 40 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATMYR1:M1341_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHL1/M1342_1.02/CISBP XX ID PHL1:M1342_1.02:CISBP XX NA PHL1 XX DE PHL1 XX OS Arabidopsis thaliana XX BF 11467; XX P0 A C G T 01 38 16 20 26 w 02 61 6 10 23 a 03 6 1 64 29 k 04 91 0 7 2 A 05 3 0 0 97 T 06 18 15 25 42 k 07 0 98 0 2 C 08 3 41 27 29 b 09 24 29 21 26 y 10 24 25 16 35 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHL1:M1342_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB24/M1343_1.02/CISBP XX ID MYB24:M1343_1.02:CISBP XX NA MYB24 XX DE MYB24 XX OS Arabidopsis thaliana XX BF 11468; XX P0 A C G T 01 29 21 26 24 r 02 37 16 24 23 a 03 28 2 60 10 r 04 3 0 25 72 K 05 5 6 0 89 T 06 54 21 6 19 a 07 5 3 88 4 G 08 5 1 86 8 G 09 4 36 2 58 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB24:M1343_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G47390/M1344_1.02/CISBP XX ID AT5G47390:M1344_1.02:CISBP XX NA AT5G47390 XX DE AT5G47390 XX OS Arabidopsis thaliana XX BF 11469; XX P0 A C G T 01 37 19 23 21 a 02 23 30 5 42 y 03 19 4 73 4 G 04 1 2 94 3 G 05 92 0 3 5 A 06 2 0 0 98 T 07 78 6 6 10 A 08 74 1 17 8 A 09 14 22 50 14 g 10 21 15 48 16 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G47390:M1344_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR18/M1345_1.02/CISBP XX ID ARR18:M1345_1.02:CISBP XX NA ARR18 XX DE ARR18 XX OS Arabidopsis thaliana XX BF 11470; XX P0 A C G T 01 32 23 23 22 a 02 20 21 20 39 t 03 27 37 18 18 m 04 33 19 19 29 w 05 83 3 3 11 A 06 0 9 91 0 G 07 100 0 0 0 A 08 0 0 0 100 T 09 73 3 2 22 A 10 5 67 5 23 c 11 16 7 70 7 G 12 34 25 26 15 r 13 22 22 23 33 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR18:M1345_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATTRB2/M1346_1.02/CISBP XX ID ATTRB2:M1346_1.02:CISBP XX NA ATTRB2 XX DE ATTRB2 XX OS Arabidopsis thaliana XX BF 11471; XX P0 A C G T 01 37 13 6 44 w 02 35 0 61 4 r 03 37 63 0 0 m 04 0 100 0 0 C 05 0 100 0 0 C 06 0 1 0 99 T 07 98 0 1 1 A 08 45 7 40 8 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATTRB2:M1346_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os01g51154/M1361_1.02/CISBP XX ID LOC_Os01g51154:M1361_1.02:CISBP XX NA LOC_Os01g51154 XX DE LOC_Os01g51154 XX OS Oryza sativa XX BF 11488; XX P0 A C G T 01 42 11 6 41 w 02 54 2 37 7 r 03 42 56 1 1 m 04 3 96 0 1 C 05 4 93 3 0 C 06 1 0 0 99 T 07 83 4 8 5 A 08 37 13 39 11 r 09 27 26 22 25 h 10 24 26 22 28 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os01g51154:M1361_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os02g09480/M1362_1.02/CISBP XX ID LOC_Os02g09480:M1362_1.02:CISBP XX NA LOC_Os02g09480 XX DE LOC_Os02g09480 XX OS Oryza sativa XX BF 11489; XX P0 A C G T 01 29 21 21 29 w 02 24 5 54 17 g 03 90 0 10 0 A 04 0 90 0 10 C 05 30 70 0 0 M 06 0 0 100 0 G 07 0 0 62 38 k 08 0 0 0 100 T 09 77 4 4 15 A 10 29 20 20 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os02g09480:M1362_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os02g22020/M1363_1.02/CISBP XX ID LOC_Os02g22020:M1363_1.02:CISBP XX NA LOC_Os02g22020 XX DE LOC_Os02g22020 XX OS Oryza sativa XX BF 11490; XX P0 A C G T 01 26 23 24 27 w 02 46 13 19 22 a 03 6 5 66 23 g 04 86 2 7 5 A 05 6 3 3 88 T 06 20 21 11 48 t 07 3 89 2 6 C 08 15 38 21 26 y 09 23 29 27 21 s 10 22 29 23 26 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os02g22020:M1363_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os03g21240/M1364_1.02/CISBP XX ID LOC_Os03g21240:M1364_1.02:CISBP XX NA LOC_Os03g21240 XX DE LOC_Os03g21240 XX OS Oryza sativa XX BF 11491; XX P0 A C G T 01 37 16 21 26 w 02 56 9 11 24 a 03 9 3 53 35 k 04 87 0 11 2 A 05 4 0 0 96 T 06 19 17 25 39 t 07 0 98 0 2 C 08 5 39 26 30 b 09 24 26 24 26 y 10 23 26 19 32 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os03g21240:M1364_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os08g06110/M1365_1.02/CISBP XX ID LOC_Os08g06110:M1365_1.02:CISBP XX NA LOC_Os08g06110 XX DE LOC_Os08g06110 XX OS Oryza sativa XX BF 11492; XX P0 A C G T 01 28 23 24 25 w 02 56 11 19 14 a 03 3 0 96 1 G 04 99 0 1 0 A 05 1 0 0 99 T 06 72 8 1 19 A 07 7 22 9 62 t 08 14 12 16 58 t 09 22 21 12 45 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os08g06110:M1365_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.362.4.1/M1384_1.02/CISBP XX ID e_gw1.362.4.1:M1384_1.02:CISBP XX NA e_gw1.362.4.1 XX DE e_gw1.362.4.1 XX OS Physcomitrella patens XX BF 11503; XX P0 A C G T 01 34 20 24 22 a 02 18 30 32 20 s 03 29 38 20 13 m 04 35 12 47 6 r 05 42 4 25 29 w 06 100 0 0 0 A 07 1 0 0 99 T 08 7 89 0 4 C 09 18 18 14 50 t 10 26 23 20 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.362.4.1:M1384_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.scaffold_70000111/M1388_1.02/CISBP XX ID fgenesh1_pg.scaffold_70000111:M1388_1.02:CISBP XX NA fgenesh1_pg.scaffold_70000111 XX DE fgenesh1_pg.scaffold_70000111 XX OS Physcomitrella patens XX BF 11507; XX P0 A C G T 01 19 31 21 29 y 02 22 14 55 9 g 03 1 2 94 3 G 04 76 7 17 0 A 05 0 4 3 93 T 06 43 15 23 19 a 07 43 9 30 18 r 08 19 25 37 19 s 09 21 20 42 17 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.scaffold_70000111:M1388_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0100010593/M1389_1.02/CISBP XX ID 0100010593:M1389_1.02:CISBP XX NA 0100010593 XX DE 0100010593 XX OS Ostreococcus tauri XX BF 11508; XX P0 A C G T 01 39 10 20 31 w 02 41 6 5 48 w 03 78 0 15 7 A 04 27 70 0 3 M 05 5 87 3 5 C 06 8 84 5 3 C 07 1 5 2 92 T 08 59 11 16 14 a 09 34 18 27 21 r 10 28 24 19 29 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0100010593:M1389_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0600010132/M1390_1.02/CISBP XX ID 0600010132:M1390_1.02:CISBP XX NA 0600010132 XX DE 0600010132 XX OS Ostreococcus tauri XX BF 11509; XX P0 A C G T 01 33 22 23 22 a 02 19 20 20 41 t 03 17 39 27 17 s 04 20 50 10 20 c 05 12 2 84 2 G 06 0 0 100 0 G 07 100 0 0 0 A 08 0 0 0 100 T 09 81 13 3 3 A 10 66 5 15 14 a 11 8 39 17 36 y 12 15 24 27 34 k 13 22 23 23 32 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0600010132:M1390_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 1200010153/M1391_1.02/CISBP XX ID 1200010153:M1391_1.02:CISBP XX NA 1200010153 XX DE 1200010153 XX OS Ostreococcus tauri XX BF 11510; XX P0 A C G T 01 63 5 8 24 a 02 29 60 3 8 m 03 13 87 0 0 C 04 1 98 1 0 C 05 2 98 0 0 C 06 0 5 0 95 T 07 90 1 6 3 A 08 29 17 42 12 r 09 24 24 18 34 t 10 23 26 18 33 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=1200010153:M1391_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 1200010282/M1392_1.02/CISBP XX ID 1200010282:M1392_1.02:CISBP XX NA 1200010282 XX DE 1200010282 XX OS Ostreococcus tauri XX BF 11511; XX P0 A C G T 01 23 31 23 23 c 02 21 21 29 29 k 03 24 26 26 24 s 04 10 10 62 18 g 05 0 1 91 8 G 06 74 17 9 0 A 07 100 0 0 0 A 08 0 0 0 100 T 09 94 2 2 2 A 10 4 4 5 87 T 11 9 20 18 53 t 12 15 55 15 15 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=1200010282:M1392_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_fgenesh1_pg.C_Chr_03.00010061/M1394_1.02/CISBP XX ID estExt_fgenesh1_pg.C_Chr_03.00010061:M1394_1.02:CISBP XX NA estExt_fgenesh1_pg.C_Chr_03.00010061 XX DE estExt_fgenesh1_pg.C_Chr_03.00010061 XX OS Ostreococcus tauri XX BF 11513; XX P0 A C G T 01 30 22 17 31 w 02 44 7 12 37 w 03 56 2 26 16 r 04 47 51 0 2 m 05 3 97 0 0 C 06 8 88 4 0 C 07 1 29 3 67 Y 08 51 18 14 17 a 09 27 21 33 19 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_fgenesh1_pg.C_Chr_03.00010061:M1394_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_fgenesh1_pg.C_Chr_03.00010215/M1395_1.02/CISBP XX ID estExt_fgenesh1_pg.C_Chr_03.00010215:M1395_1.02:CISBP XX NA estExt_fgenesh1_pg.C_Chr_03.00010215 XX DE estExt_fgenesh1_pg.C_Chr_03.00010215 XX OS Ostreococcus tauri XX BF 11514; XX P0 A C G T 01 27 25 20 28 w 02 32 13 44 11 r 03 5 3 89 3 G 04 83 5 9 3 A 05 3 2 2 93 T 06 59 12 12 17 a 07 56 6 23 15 a 08 17 25 41 17 g 09 26 19 37 18 r 10 24 26 19 31 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_fgenesh1_pg.C_Chr_03.00010215:M1395_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_fgenesh1_pg.C_Chr_13.00010057/M1396_1.02/CISBP XX ID estExt_fgenesh1_pg.C_Chr_13.00010057:M1396_1.02:CISBP XX NA estExt_fgenesh1_pg.C_Chr_13.00010057 XX DE estExt_fgenesh1_pg.C_Chr_13.00010057 XX OS Ostreococcus tauri XX BF 11515; XX P0 A C G T 01 35 20 14 31 w 02 48 2 39 11 r 03 45 52 1 2 m 04 1 98 0 1 C 05 1 98 1 0 C 06 0 6 0 94 T 07 73 7 6 14 A 08 36 17 31 16 r 09 26 25 21 28 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_fgenesh1_pg.C_Chr_13.00010057:M1396_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC estExt_fgenesh1_pg.C_Chr_16.00010090/M1397_1.02/CISBP XX ID estExt_fgenesh1_pg.C_Chr_16.00010090:M1397_1.02:CISBP XX NA estExt_fgenesh1_pg.C_Chr_16.00010090 XX DE estExt_fgenesh1_pg.C_Chr_16.00010090 XX OS Ostreococcus tauri XX BF 11516; XX P0 A C G T 01 20 29 29 22 s 02 27 33 23 17 m 03 28 20 39 13 r 04 33 10 27 30 d 05 98 0 1 1 A 06 9 2 1 88 T 07 13 66 10 11 c 08 24 23 21 32 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=estExt_fgenesh1_pg.C_Chr_16.00010090:M1397_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC anac025/M1400_1.02/CISBP XX ID anac025:M1400_1.02:CISBP XX NA anac025 XX DE anac025 XX OS Arabidopsis thaliana XX BF 11519; XX P0 A C G T 01 0 42 0 58 y 02 96 1 3 0 A 03 0 100 0 0 C 04 0 0 100 0 G 05 0 28 7 65 y 06 83 17 0 0 A 07 93 0 0 7 A 08 5 60 5 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=anac025:M1400_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAP/M1401_1.02/CISBP XX ID NAP:M1401_1.02:CISBP XX NA NAP XX DE NAP XX OS Arabidopsis thaliana XX BF 11520; XX P0 A C G T 01 26 26 20 28 h 02 38 12 45 5 r 03 0 0 91 9 G 04 3 0 0 97 T 05 2 98 0 0 C 06 68 14 5 13 A 07 60 10 12 18 a 08 25 27 27 21 s 09 25 25 29 21 v XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAP:M1401_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NST1/M1402_1.02/CISBP XX ID NST1:M1402_1.02:CISBP XX NA NST1 XX DE NST1 XX OS Arabidopsis thaliana XX BF 11521; XX P0 A C G T 01 44 19 19 18 a 02 4 5 5 86 T 03 45 0 8 47 w 04 72 0 28 0 R 05 8 92 0 0 C 06 0 0 100 0 G 07 0 25 0 75 T 08 100 0 0 0 A 09 81 6 7 6 A 10 31 20 21 28 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NST1:M1402_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL9/M1403_1.02/CISBP XX ID NTL9:M1403_1.02:CISBP XX NA NTL9 XX DE NTL9 XX OS Arabidopsis thaliana XX BF 11522; XX P0 A C G T 01 1 1 1 97 T 02 0 1 0 99 T 03 99 1 0 0 A 04 99 0 0 1 A 05 0 0 99 1 G 06 1 0 0 99 T 07 99 1 0 0 A 08 99 0 1 0 A 09 1 1 1 97 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL9:M1403_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC2/M1404_1.02/CISBP XX ID NAC2:M1404_1.02:CISBP XX NA NAC2 XX DE NAC2 XX OS Arabidopsis thaliana XX BF 11523; XX P0 A C G T 01 23 23 23 31 t 02 32 22 23 23 a 03 56 8 28 8 r 04 2 94 2 2 C 05 91 0 0 9 A 06 43 48 0 9 m 07 0 0 100 0 G 08 22 50 9 19 c 09 25 61 2 12 c 10 93 2 3 2 A 11 27 30 26 17 v 12 31 23 23 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC2:M1404_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC079/M1405_1.02/CISBP XX ID ANAC079:M1405_1.02:CISBP XX NA ANAC079 XX DE ANAC079 XX OS Arabidopsis thaliana XX BF 11524; XX P0 A C G T 01 66 0 22 12 a 02 0 69 0 31 Y 03 100 0 0 0 A 04 0 100 0 0 C 05 0 0 100 0 G 06 0 86 0 14 C 07 78 7 1 14 A 08 100 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC079:M1405_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC083/M1406_1.02/CISBP XX ID NAC083:M1406_1.02:CISBP XX NA NAC083 XX DE NAC083 XX OS Arabidopsis thaliana XX BF 11525; XX P0 A C G T 01 44 12 12 32 w 02 2 33 3 62 y 03 100 0 0 0 A 04 0 100 0 0 C 05 0 0 100 0 G 06 0 60 0 40 y 07 100 0 0 0 A 08 100 0 0 0 A 09 13 52 13 22 c 10 23 32 22 23 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC083:M1406_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATNAC6/M1407_1.02/CISBP XX ID ATNAC6:M1407_1.02:CISBP XX NA ATNAC6 XX DE ATNAC6 XX OS Arabidopsis thaliana XX BF 11526; XX P0 A C G T 01 42 12 24 22 a 02 7 54 10 29 y 03 92 1 1 6 A 04 18 74 2 6 C 05 10 3 72 15 G 06 13 46 14 27 y 07 41 24 9 26 w 08 74 3 5 18 A 09 20 33 20 27 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATNAC6:M1407_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC100/M1408_1.02/CISBP XX ID ANAC100:M1408_1.02:CISBP XX NA ANAC100 XX DE ANAC100 XX OS Arabidopsis thaliana XX BF 11527; XX P0 A C G T 01 37 15 26 22 r 02 10 43 16 31 y 03 86 4 4 6 A 04 26 66 4 4 m 05 12 5 65 18 g 06 16 40 17 27 y 07 36 25 11 28 w 08 66 4 9 21 a 09 24 30 19 27 y 10 22 34 20 24 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC100:M1408_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002871237.1/M1409_1.02/CISBP XX ID XM_002871237.1:M1409_1.02:CISBP XX NA XM_002871237.1 XX DE XM_002871237.1 XX OS Arabidopsis lyrata XX BF 11528; XX P0 A C G T 01 39 14 26 21 r 02 10 45 15 30 y 03 89 3 3 5 A 04 26 67 2 5 m 05 12 8 63 17 g 06 15 40 18 27 y 07 37 25 10 28 h 08 68 3 7 22 A 09 24 31 18 27 y 10 22 35 20 23 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002871237.1:M1409_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002866389.1/M1410_1.02/CISBP XX ID XM_002866389.1:M1410_1.02:CISBP XX NA XM_002866389.1 XX DE XM_002866389.1 XX OS Arabidopsis lyrata XX BF 11529; XX P0 A C G T 01 42 12 28 18 r 02 6 54 9 31 y 03 96 3 0 1 A 04 15 83 1 1 C 05 7 2 80 11 G 06 12 52 11 25 c 07 43 22 10 25 a 08 77 2 4 17 A 09 20 34 19 27 y 10 20 43 18 19 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002866389.1:M1410_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os06g04090/M1411_1.02/CISBP XX ID LOC_Os06g04090:M1411_1.02:CISBP XX NA LOC_Os06g04090 XX DE LOC_Os06g04090 XX OS Oryza sativa XX BF 11530; XX P0 A C G T 01 22 23 25 30 k 02 25 23 21 31 w 03 25 24 23 28 t 04 18 28 20 34 y 05 59 16 11 14 a 06 31 49 8 12 m 07 17 9 54 20 g 08 18 39 18 25 y 09 35 22 15 28 w 10 54 10 14 22 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os06g04090:M1411_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.159.34.1/M1412_1.02/CISBP XX ID e_gw1.159.34.1:M1412_1.02:CISBP XX NA e_gw1.159.34.1 XX DE e_gw1.159.34.1 XX OS Physcomitrella patens XX BF 11531; XX P0 A C G T 01 42 12 24 22 a 02 8 50 9 33 y 03 85 3 4 8 A 04 16 75 2 7 C 05 11 5 67 17 g 06 13 49 13 25 y 07 36 27 8 29 h 08 72 3 6 19 A 09 21 34 16 29 y 10 22 39 18 21 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.159.34.1:M1412_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.279.28.1/M1413_1.02/CISBP XX ID e_gw1.279.28.1:M1413_1.02:CISBP XX NA e_gw1.279.28.1 XX DE e_gw1.279.28.1 XX OS Physcomitrella patens XX BF 11532; XX P0 A C G T 01 57 11 21 11 a 02 16 62 7 15 c 03 84 2 11 3 A 04 27 64 0 9 m 05 17 0 64 19 g 06 18 73 0 9 C 07 81 0 0 19 A 08 100 0 0 0 A 09 22 33 14 31 y 10 18 18 18 46 t 11 32 23 22 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.279.28.1:M1413_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.288.15.1/M1414_1.02/CISBP XX ID e_gw1.288.15.1:M1414_1.02:CISBP XX NA e_gw1.288.15.1 XX DE e_gw1.288.15.1 XX OS Physcomitrella patens XX BF 11533; XX P0 A C G T 01 21 24 24 31 t 02 26 27 17 30 h 03 38 14 24 24 a 04 12 42 13 33 y 05 82 7 4 7 A 06 21 69 3 7 C 07 12 6 64 18 g 08 16 41 17 26 y 09 37 25 10 28 w 10 67 4 9 20 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.288.15.1:M1414_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC e_gw1.327.11.1/M1415_1.02/CISBP XX ID e_gw1.327.11.1:M1415_1.02:CISBP XX NA e_gw1.327.11.1 XX DE e_gw1.327.11.1 XX OS Physcomitrella patens XX BF 11534; XX P0 A C G T 01 32 23 23 22 a 02 55 5 5 35 w 03 29 14 0 57 w 04 100 0 0 0 A 05 10 62 0 28 y 06 28 0 64 8 r 07 19 53 0 28 y 08 82 0 0 18 A 09 92 3 3 2 A 10 21 20 20 39 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=e_gw1.327.11.1:M1415_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MDP0000762302/M1416_1.02/CISBP XX ID MDP0000762302:M1416_1.02:CISBP XX NA MDP0000762302 XX DE MDP0000762302 XX OS Malus x domestica XX BF 11535; XX P0 A C G T 01 21 25 15 39 t 02 20 18 26 36 k 03 14 27 13 46 y 04 74 10 5 11 A 05 29 60 6 5 m 06 11 6 65 18 g 07 16 50 7 27 y 08 39 19 13 29 w 09 66 2 10 22 a 10 17 38 16 29 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MDP0000762302:M1416_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK06791.1/M1559_1.02/CISBP XX ID PK06791.1:M1559_1.02:CISBP XX NA PK06791.1 XX DE PK06791.1 XX OS Cannabis sativa XX BF 11678; XX P0 A C G T 01 25 25 22 28 t 02 22 24 20 34 t 03 11 3 82 4 G 04 1 4 1 94 T 05 97 2 0 1 A 06 0 98 1 1 C 07 7 5 79 9 G 08 20 4 62 14 g 09 33 28 13 26 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK06791.1:M1559_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK22320.1/M1560_1.02/CISBP XX ID PK22320.1:M1560_1.02:CISBP XX NA PK22320.1 XX DE PK22320.1 XX OS Cannabis sativa XX BF 11679; XX P0 A C G T 01 24 20 28 28 k 02 23 23 22 32 t 03 11 3 82 4 G 04 1 3 0 96 T 05 96 2 0 2 A 06 1 97 0 2 C 07 4 2 89 5 G 08 15 2 74 9 G 09 31 28 14 27 h 10 26 32 17 25 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK22320.1:M1560_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL14/M1561_1.02/CISBP XX ID SPL14:M1561_1.02:CISBP XX NA SPL14 XX DE SPL14 XX OS Arabidopsis thaliana XX BF 3015; XX P0 A C G T 01 24 25 30 21 g 02 25 18 31 26 k 03 25 20 30 25 d 04 18 11 62 9 g 05 3 12 11 74 T 06 82 11 7 0 A 07 1 97 0 2 C 08 17 14 55 14 g 09 21 14 48 17 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL14:M1561_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL11/M1562_1.02/CISBP XX ID SPL11:M1562_1.02:CISBP XX NA SPL11 XX DE SPL11 XX OS Arabidopsis thaliana XX BF 11680; XX P0 A C G T 01 23 23 23 31 t 02 31 23 23 23 a 03 17 32 17 34 y 04 15 62 6 17 c 05 0 0 100 0 G 06 0 0 0 100 T 07 100 0 0 0 A 08 0 100 0 0 C 09 2 2 94 2 G 10 3 2 77 18 G 11 57 8 8 27 w 12 19 27 19 35 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL11:M1562_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL4/M1563_1.02/CISBP XX ID SPL4:M1563_1.02:CISBP XX NA SPL4 XX DE SPL4 XX OS Arabidopsis thaliana XX BF 7520; XX P0 A C G T 01 23 33 20 24 c 02 21 5 64 10 g 03 4 8 3 85 T 04 93 5 2 0 A 05 4 90 0 6 C 06 19 11 56 14 g 07 26 11 41 22 r 08 26 25 20 29 h 09 26 26 20 28 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL4:M1563_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G76580/M1564_1.02/CISBP XX ID AT1G76580:M1564_1.02:CISBP XX NA AT1G76580 XX DE AT1G76580 XX OS Arabidopsis thaliana XX BF 11681; XX P0 A C G T 01 27 22 26 25 r 02 20 32 17 31 y 03 20 36 18 26 y 04 19 7 62 12 g 05 10 10 9 71 T 06 71 9 10 10 A 07 12 62 7 19 c 08 26 18 36 20 r 09 31 17 32 20 r 10 25 26 22 27 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G76580:M1564_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL5/M1565_1.02/CISBP XX ID SPL5:M1565_1.02:CISBP XX NA SPL5 XX DE SPL5 XX OS Arabidopsis thaliana XX BF 11682; XX P0 A C G T 01 19 17 29 35 k 02 23 20 23 34 t 03 14 5 74 7 G 04 2 4 1 93 T 05 93 6 1 0 A 06 1 97 0 2 C 07 8 6 78 8 G 08 18 5 58 19 g 09 25 30 15 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL5:M1565_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL12/M1566_1.02/CISBP XX ID SPL12:M1566_1.02:CISBP XX NA SPL12 XX DE SPL12 XX OS Arabidopsis thaliana XX BF 11683; XX P0 A C G T 01 27 18 21 34 w 02 14 5 76 5 G 03 1 4 1 94 T 04 95 5 0 0 A 05 1 99 0 0 C 06 8 8 74 10 G 07 25 5 54 16 g 08 28 26 15 31 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL12:M1566_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL7/M1567_1.02/CISBP XX ID SPL7:M1567_1.02:CISBP XX NA SPL7 XX DE SPL7 XX OS Arabidopsis thaliana XX BF 11684; XX P0 A C G T 01 25 11 24 40 w 02 11 3 81 5 G 03 0 2 0 98 T 04 99 1 0 0 A 05 1 99 0 0 C 06 6 4 63 27 k 07 51 9 20 20 a 08 15 42 13 30 y 09 32 32 16 20 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL7:M1567_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B9GPL8_POPTR/M1568_1.02/CISBP XX ID B9GPL8_POPTR:M1568_1.02:CISBP XX NA B9GPL8_POPTR XX DE B9GPL8_POPTR XX OS Populus trichocarpa XX BF 11685; XX P0 A C G T 01 20 27 32 21 s 02 1 3 95 1 G 03 1 1 10 88 T 04 95 4 1 0 A 05 15 71 3 11 C 06 4 8 86 2 G 07 19 5 69 7 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B9GPL8_POPTR:M1568_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.scaffold_194000034/M1570_1.02/CISBP XX ID fgenesh1_pg.scaffold_194000034:M1570_1.02:CISBP XX NA fgenesh1_pg.scaffold_194000034 XX DE fgenesh1_pg.scaffold_194000034 XX OS Physcomitrella patens XX BF 11687; XX P0 A C G T 01 26 22 26 26 d 02 24 29 20 27 y 03 23 31 21 25 y 04 13 5 72 10 G 05 6 9 16 69 T 06 69 16 9 6 A 07 10 72 5 13 C 08 25 21 31 23 r 09 27 20 29 24 r 10 26 26 22 26 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.scaffold_194000034:M1570_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.scaffold_252000020/M1571_1.02/CISBP XX ID fgenesh1_pg.scaffold_252000020:M1571_1.02:CISBP XX NA fgenesh1_pg.scaffold_252000020 XX DE fgenesh1_pg.scaffold_252000020 XX OS Physcomitrella patens XX BF 11688; XX P0 A C G T 01 24 25 29 22 s 02 29 25 29 17 v 03 16 15 55 14 g 04 6 14 29 51 k 05 66 10 18 6 a 06 4 72 8 16 C 07 28 18 42 12 r 08 27 18 36 19 r 09 21 27 26 26 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.scaffold_252000020:M1571_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ppa000682m/M1572_1.02/CISBP XX ID ppa000682m:M1572_1.02:CISBP XX NA ppa000682m XX DE ppa000682m XX OS Prunus persica XX BF 11689; XX P0 A C G T 01 24 27 29 20 s 02 22 28 31 19 s 03 23 25 30 22 s 04 20 25 34 21 s 05 11 10 72 7 G 06 2 12 7 79 T 07 81 14 4 1 A 08 0 100 0 0 C 09 14 11 66 9 g 10 23 9 53 15 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ppa000682m:M1572_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC INO/M1575_1.02/CISBP XX ID INO:M1575_1.02:CISBP XX NA INO XX DE INO XX OS Arabidopsis thaliana XX BF 11693; XX P0 A C G T 01 24 24 23 29 t 02 24 29 18 29 y 03 33 20 20 27 w 04 3 32 13 52 y 05 51 3 46 0 r 06 41 14 14 31 w 07 23 22 13 42 t 08 35 13 15 37 w 09 43 12 23 22 a 10 29 25 21 25 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=INO:M1575_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC YAB5/M1576_1.02/CISBP XX ID YAB5:M1576_1.02:CISBP XX NA YAB5 XX DE YAB5 XX OS Arabidopsis thaliana XX BF 8904; XX P0 A C G T 01 24 21 24 31 t 02 32 20 20 28 w 03 35 23 18 24 a 04 28 17 17 38 w 05 18 41 7 34 y 06 48 8 44 0 r 07 26 17 26 31 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=YAB5:M1576_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ASIL1/M1618_1.02/CISBP XX ID ASIL1:M1618_1.02:CISBP XX NA ASIL1 XX DE ASIL1 XX OS Arabidopsis thaliana XX BF 11722; XX P0 A C G T 01 26 20 22 32 w 02 23 28 19 30 y 03 31 10 31 28 d 04 21 44 8 27 y 05 10 71 5 14 C 06 14 5 71 10 G 07 28 8 43 21 r 08 28 31 10 31 h 09 30 19 28 23 r 10 32 22 20 26 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ASIL1:M1618_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G00238/M1619_1.02/CISBP XX ID AT4G00238:M1619_1.02:CISBP XX NA AT4G00238 XX DE AT4G00238 XX OS Arabidopsis thaliana XX BF 11723; XX P0 A C G T 01 22 24 27 27 k 02 17 18 38 27 k 03 22 20 36 22 g 04 15 47 17 21 c 05 15 55 18 12 c 06 11 19 55 15 g 07 21 17 47 15 g 08 22 36 20 22 c 09 27 38 18 17 m 10 27 27 24 22 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G00238:M1619_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G00270/M1620_1.02/CISBP XX ID AT4G00270:M1620_1.02:CISBP XX NA AT4G00270 XX DE AT4G00270 XX OS Arabidopsis thaliana XX BF 11724; XX P0 A C G T 01 24 56 4 16 c 02 14 81 0 5 C 03 3 0 97 0 G 04 0 0 100 0 G 05 5 95 0 0 C 06 0 100 0 0 C 07 0 0 97 3 G 08 21 61 4 14 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G00270:M1620_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os03g25430/M1621_1.02/CISBP XX ID LOC_Os03g25430:M1621_1.02:CISBP XX NA LOC_Os03g25430 XX DE LOC_Os03g25430 XX OS Oryza sativa XX BF 11725; XX P0 A C G T 01 28 26 18 28 h 02 20 37 24 19 c 03 20 36 26 18 s 04 18 25 48 9 s 05 66 0 33 1 r 06 15 65 1 19 c 07 23 39 17 21 c 08 24 32 23 21 c 09 29 23 29 19 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os03g25430:M1621_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PK14653.1/M1643_1.02/CISBP XX ID PK14653.1:M1643_1.02:CISBP XX NA PK14653.1 XX DE PK14653.1 XX OS Cannabis sativa XX BF 11747; XX P0 A C G T 01 9 15 60 16 g 02 5 11 16 68 t 03 0 0 91 9 G 04 9 0 84 7 G 05 8 11 69 12 G 06 12 69 11 8 C 07 8 84 0 8 C 08 9 91 0 0 C 09 68 16 11 5 a 10 17 60 14 9 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PK14653.1:M1643_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP24/M1644_1.02/CISBP XX ID TCP24:M1644_1.02:CISBP XX NA TCP24 XX DE TCP24 XX OS Arabidopsis thaliana XX BF 11748; XX P0 A C G T 01 9 25 17 49 t 02 9 17 52 22 g 03 3 11 70 16 G 04 0 6 30 64 k 05 6 29 46 19 s 06 11 65 8 16 c 07 17 46 14 23 c 08 23 31 18 28 y 09 18 35 25 22 s 10 16 36 19 29 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP24:M1644_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP3/M1645_1.02/CISBP XX ID TCP3:M1645_1.02:CISBP XX NA TCP3 XX DE TCP3 XX OS Arabidopsis thaliana XX BF 11749; XX P0 A C G T 01 17 24 31 28 k 02 17 5 58 20 g 03 4 2 90 4 G 04 3 12 80 5 G 05 62 24 3 11 a 06 2 96 2 0 C 07 2 98 0 0 C 08 80 7 11 2 A 09 8 67 11 14 c 10 29 30 16 25 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP3:M1645_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MEE35/M1646_1.02/CISBP XX ID MEE35:M1646_1.02:CISBP XX NA MEE35 XX DE MEE35 XX OS Arabidopsis thaliana XX BF 11750; XX P0 A C G T 01 11 0 78 11 G 02 0 0 100 0 G 03 0 0 100 0 G 04 83 17 0 0 A 05 0 100 0 0 C 06 0 100 0 0 C 07 100 0 0 0 A 08 0 100 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MEE35:M1646_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP20/M1647_1.02/CISBP XX ID TCP20:M1647_1.02:CISBP XX NA TCP20 XX DE TCP20 XX OS Arabidopsis thaliana XX BF 3891; XX P0 A C G T 01 5 3 80 12 G 02 11 2 80 7 G 03 9 36 42 13 s 04 6 87 0 7 C 05 0 100 0 0 C 06 1 96 0 3 C 07 82 6 8 4 A 08 2 82 8 8 C 09 30 34 15 21 m 10 29 23 24 24 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP20:M1647_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP2/M1648_1.02/CISBP XX ID TCP2:M1648_1.02:CISBP XX NA TCP2 XX DE TCP2 XX OS Arabidopsis thaliana XX BF 11751; XX P0 A C G T 01 22 17 42 19 g 02 10 19 15 56 t 03 4 0 84 12 G 04 0 0 98 2 G 05 7 8 52 33 k 06 33 52 8 7 m 07 2 98 0 0 C 08 12 84 0 4 C 09 57 15 19 9 a 10 19 42 17 22 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP2:M1648_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G51910/M1649_1.02/CISBP XX ID AT5G51910:M1649_1.02:CISBP XX NA AT5G51910 XX DE AT5G51910 XX OS Arabidopsis thaliana XX BF 11752; XX P0 A C G T 01 15 22 18 45 t 02 13 15 51 21 g 03 3 1 85 11 G 04 11 6 78 5 G 05 19 28 41 12 s 06 11 74 2 13 C 07 2 96 0 2 C 08 0 100 0 0 C 09 84 3 13 0 A 10 0 81 11 8 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G51910:M1649_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP5/M1650_1.02/CISBP XX ID TCP5:M1650_1.02:CISBP XX NA TCP5 XX DE TCP5 XX OS Arabidopsis thaliana XX BF 11753; XX P0 A C G T 01 0 0 99 1 G 02 0 0 100 0 G 03 0 0 100 0 G 04 100 0 0 0 A 05 0 100 0 0 C 06 0 100 0 0 C 07 100 0 0 0 A 08 0 74 0 26 Y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP5:M1650_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002893560.1/M1651_1.02/CISBP XX ID XM_002893560.1:M1651_1.02:CISBP XX NA XM_002893560.1 XX DE XM_002893560.1 XX OS Arabidopsis lyrata XX BF 11754; XX P0 A C G T 01 33 20 30 17 r 02 11 24 22 43 t 03 15 4 56 25 k 04 6 12 55 27 k 05 15 26 32 27 b 06 26 32 27 15 v 07 27 55 12 6 m 08 26 56 4 14 m 09 43 22 24 11 a 10 17 30 20 33 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002893560.1:M1651_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002876964.1/M1652_1.02/CISBP XX ID XM_002876964.1:M1652_1.02:CISBP XX NA XM_002876964.1 XX DE XM_002876964.1 XX OS Arabidopsis lyrata XX BF 11755; BF 11757; XX P0 A C G T 01 1 0 99 0 G 02 26 0 74 0 R 03 0 50 50 0 s 04 0 100 0 0 C 05 0 99 0 1 C 06 1 99 0 0 C 07 99 0 0 1 A 08 0 99 0 1 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002876964.1:M1652_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002867953.1/M1653_1.02/CISBP XX ID XM_002867953.1:M1653_1.02:CISBP XX NA XM_002867953.1 XX DE XM_002867953.1 XX OS Arabidopsis lyrata XX BF 11756; XX P0 A C G T 01 0 0 100 0 G 02 1 0 99 0 G 03 0 33 67 0 s 04 33 66 0 1 m 05 1 99 0 0 C 06 1 99 0 0 C 07 99 0 0 1 A 08 0 100 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002867953.1:M1653_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC XM_002866361.1/M1655_1.02/CISBP XX ID XM_002866361.1:M1655_1.02:CISBP XX NA XM_002866361.1 XX DE XM_002866361.1 XX OS Arabidopsis lyrata XX BF 11758; XX P0 A C G T 01 0 1 99 0 G 02 1 0 99 0 G 03 0 0 99 1 G 04 99 0 1 0 A 05 0 100 0 0 C 06 0 100 0 0 C 07 100 0 0 0 A 08 1 99 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=XM_002866361.1:M1655_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GSVIVG00027588001/M1656_1.02/CISBP XX ID GSVIVG00027588001:M1656_1.02:CISBP XX NA GSVIVG00027588001 XX DE GSVIVG00027588001 XX OS Vitis vinifera XX BF 11759; XX P0 A C G T 01 15 22 21 42 t 02 14 19 51 16 g 03 1 0 95 4 G 04 5 1 92 2 G 05 14 14 55 17 g 06 7 82 3 8 C 07 1 98 1 0 C 08 0 97 0 3 C 09 89 2 7 2 A 10 0 88 6 6 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GSVIVG00027588001:M1656_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOC_Os02g42380/M1657_1.02/CISBP XX ID LOC_Os02g42380:M1657_1.02:CISBP XX NA LOC_Os02g42380 XX DE LOC_Os02g42380 XX OS Oryza sativa XX BF 11760; XX P0 A C G T 01 18 13 41 28 k 02 7 15 33 45 k 03 0 0 93 7 G 04 0 0 100 0 G 05 13 10 66 11 g 06 11 66 10 13 c 07 0 100 0 0 C 08 7 93 0 0 C 09 45 33 15 7 m 10 28 41 13 18 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOC_Os02g42380:M1657_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OsI_08196/M1658_1.02/CISBP XX ID OsI_08196:M1658_1.02:CISBP XX NA OsI_08196 XX DE OsI_08196 XX OS Oryza sativa XX BF 11761; XX P0 A C G T 01 0 0 95 5 G 02 5 0 95 0 G 03 9 9 73 9 G 04 0 86 5 9 C 05 0 100 0 0 C 06 0 100 0 0 C 07 90 5 5 0 A 08 0 86 7 7 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OsI_08196:M1658_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC scaffold_301743.1/M1659_1.02/CISBP XX ID scaffold_301743.1:M1659_1.02:CISBP XX NA scaffold_301743.1 XX DE scaffold_301743.1 XX OS Arabidopsis lyrata XX BF 11762; XX P0 A C G T 01 9 28 17 46 y 02 3 8 49 40 k 03 4 0 88 8 G 04 2 1 95 2 G 05 4 12 83 1 G 06 76 21 1 2 A 07 0 95 5 0 C 08 0 100 0 0 C 09 87 0 13 0 A 10 1 91 1 7 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=scaffold_301743.1:M1659_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC cassava45561.m1/M1660_1.02/CISBP XX ID cassava45561.m1:M1660_1.02:CISBP XX NA cassava45561.m1 XX DE cassava45561.m1 XX OS Manihot esculenta XX BF 11763; XX P0 A C G T 01 8 14 59 19 g 02 2 1 90 7 G 03 10 3 83 4 G 04 15 31 42 12 s 05 4 88 1 7 C 06 0 96 1 3 C 07 0 98 0 2 C 08 89 2 8 1 A 09 0 91 4 5 C 10 27 40 11 22 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=cassava45561.m1:M1660_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Glyma19g26560.1/M1661_1.02/CISBP XX ID Glyma19g26560.1:M1661_1.02:CISBP XX NA Glyma19g26560.1 XX DE Glyma19g26560.1 XX OS Glycine max XX BF 11764; XX P0 A C G T 01 10 20 48 22 g 02 2 1 91 6 G 03 9 2 86 3 G 04 11 31 44 14 s 05 4 88 3 5 C 06 0 100 0 0 C 07 0 98 0 2 C 08 90 2 7 1 A 09 2 84 5 9 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Glyma19g26560.1:M1661_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LjSGA_053525.1/M1662_1.02/CISBP XX ID LjSGA_053525.1:M1662_1.02:CISBP XX NA LjSGA_053525.1 XX DE LjSGA_053525.1 XX OS Lotus japonicus XX BF 11765; XX P0 A C G T 01 0 0 100 0 G 02 0 0 100 0 G 03 15 14 57 14 g 04 0 100 0 0 C 05 0 100 0 0 C 06 0 100 0 0 C 07 100 0 0 0 A 08 1 99 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LjSGA_053525.1:M1662_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LjT20A21.20.nc/M1663_1.02/CISBP XX ID LjT20A21.20.nc:M1663_1.02:CISBP XX NA LjT20A21.20.nc XX DE LjT20A21.20.nc XX OS Lotus japonicus XX BF 11766; XX P0 A C G T 01 5 0 75 20 G 02 0 0 100 0 G 03 0 0 100 0 G 04 93 7 0 0 A 05 0 100 0 0 C 06 0 100 0 0 C 07 88 4 8 0 A 08 6 59 6 29 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LjT20A21.20.nc:M1663_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtGRF6/M1677_1.02/CISBP XX ID AtGRF6:M1677_1.02:CISBP XX NA AtGRF6 XX DE AtGRF6 XX OS Arabidopsis thaliana XX BF 11810; XX P0 A C G T 01 26 27 16 31 h 02 15 52 19 14 c 03 22 20 0 58 t 04 21 1 68 10 G 05 38 26 16 20 m 06 34 31 17 18 m 07 34 22 25 19 a 08 28 24 23 25 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtGRF6:M1677_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY14/M1678_1.02/CISBP XX ID WRKY14:M1678_1.02:CISBP XX NA WRKY14 XX DE WRKY14 XX OS Arabidopsis thaliana XX BF 11811; XX P0 A C G T 01 33 19 22 26 w 02 39 9 44 8 r 03 1 1 93 5 G 04 2 0 0 98 T 05 5 93 1 1 C 06 88 6 2 4 A 07 85 2 11 2 A 08 22 58 6 14 c 09 16 19 46 19 g 10 23 28 28 21 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY14:M1678_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY63/M1679_1.02/CISBP XX ID WRKY63:M1679_1.02:CISBP XX NA WRKY63 XX DE WRKY63 XX OS Arabidopsis thaliana XX BF 11812; XX P0 A C G T 01 20 37 14 29 y 02 16 0 84 0 G 03 0 0 100 0 G 04 0 0 0 100 T 05 0 100 0 0 C 06 100 0 0 0 A 07 98 0 0 2 A 08 13 51 23 13 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY63:M1679_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY57/M1680_1.02/CISBP XX ID WRKY57:M1680_1.02:CISBP XX NA WRKY57 XX DE WRKY57 XX OS Arabidopsis thaliana XX BF 11813; XX P0 A C G T 01 40 18 20 22 a 02 41 17 16 26 w 03 50 8 31 11 r 04 3 2 87 8 G 05 3 0 0 97 T 06 5 91 1 3 C 07 88 5 2 5 A 08 82 1 11 6 A 09 26 51 8 15 m 10 20 21 38 21 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY57:M1680_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY40/M1681_1.02/CISBP XX ID WRKY40:M1681_1.02:CISBP XX NA WRKY40 XX DE WRKY40 XX OS Arabidopsis thaliana XX BF 11814; XX P0 A C G T 01 25 27 20 28 y 02 38 12 44 6 r 03 0 0 91 9 G 04 3 0 0 97 T 05 2 98 0 0 C 06 67 15 5 13 a 07 60 10 12 18 a 08 25 27 27 21 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY40:M1681_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY15/M1682_1.02/CISBP XX ID WRKY15:M1682_1.02:CISBP XX NA WRKY15 XX DE WRKY15 XX OS Arabidopsis thaliana XX BF 11815; XX P0 A C G T 01 30 20 25 25 a 02 37 10 46 7 r 03 0 1 95 4 G 04 1 0 1 98 T 05 4 96 0 0 C 06 81 10 3 6 A 07 75 4 15 6 A 08 25 52 9 14 m 09 19 24 40 17 g 10 21 29 28 22 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY15:M1682_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATWRKY17/M1683_1.02/CISBP XX ID ATWRKY17:M1683_1.02:CISBP XX NA ATWRKY17 XX DE ATWRKY17 XX OS Arabidopsis thaliana XX BF 11816; XX P0 A C G T 01 34 22 19 25 a 02 41 15 20 24 a 03 41 12 33 14 r 04 6 3 80 11 G 05 6 1 0 93 T 06 8 86 1 5 C 07 76 9 3 12 A 08 73 2 19 6 A 09 25 50 6 19 c 10 21 18 39 22 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATWRKY17:M1683_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY60/M1684_1.02/CISBP XX ID WRKY60:M1684_1.02:CISBP XX NA WRKY60 XX DE WRKY60 XX OS Arabidopsis thaliana XX BF 11817; XX P0 A C G T 01 27 28 27 18 v 02 10 41 11 38 y 03 14 2 82 2 G 04 0 0 100 0 G 05 0 0 0 100 T 06 0 100 0 0 C 07 100 0 0 0 A 08 100 0 0 0 A 09 26 60 7 7 m 10 15 25 46 14 g 11 23 23 23 31 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY60:M1684_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY25/M1685_1.02/CISBP XX ID WRKY25:M1685_1.02:CISBP XX NA WRKY25 XX DE WRKY25 XX OS Arabidopsis thaliana XX BF 11818; XX P0 A C G T 01 6 50 12 32 y 02 27 0 73 0 R 03 0 0 100 0 G 04 0 0 0 100 T 05 0 100 0 0 C 06 100 0 0 0 A 07 90 0 6 4 A 08 18 63 8 11 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY25:M1685_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY21/M1686_1.02/CISBP XX ID WRKY21:M1686_1.02:CISBP XX NA WRKY21 XX DE WRKY21 XX OS Arabidopsis thaliana XX BF 11819; XX P0 A C G T 01 28 22 25 25 a 02 32 19 22 27 w 03 40 9 41 10 r 04 5 0 91 4 G 05 9 0 1 90 T 06 0 100 0 0 C 07 87 7 2 4 A 08 78 1 16 5 A 09 21 61 7 11 c 10 16 21 43 20 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY21:M1686_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY33/M1687_1.02/CISBP XX ID WRKY33:M1687_1.02:CISBP XX NA WRKY33 XX DE WRKY33 XX OS Arabidopsis thaliana XX BF 11820; XX P0 A C G T 01 27 24 23 26 w 02 23 27 20 30 y 03 37 13 41 9 r 04 3 1 79 17 G 05 1 0 0 99 T 06 10 89 0 1 C 07 61 16 8 15 a 08 53 8 21 18 a 09 31 36 15 18 m 10 24 23 31 22 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY33:M1687_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY43/M1688_1.02/CISBP XX ID WRKY43:M1688_1.02:CISBP XX NA WRKY43 XX DE WRKY43 XX OS Arabidopsis thaliana XX BF 11821; XX P0 A C G T 01 37 21 17 25 a 02 51 9 34 6 r 03 5 2 88 5 G 04 7 2 0 91 T 05 9 89 1 1 C 06 80 6 6 8 A 07 77 3 13 7 A 08 25 46 11 18 m 09 33 20 31 16 r 10 23 31 22 24 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY43:M1688_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY23/M1689_1.02/CISBP XX ID WRKY23:M1689_1.02:CISBP XX NA WRKY23 XX DE WRKY23 XX OS Arabidopsis thaliana XX BF 11822; XX P0 A C G T 01 70 0 30 0 R 02 0 0 100 0 G 03 0 0 0 100 T 04 0 100 0 0 C 05 100 0 0 0 A 06 100 0 0 0 A 07 17 83 0 0 C 08 14 14 72 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY23:M1689_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY22/M1690_1.02/CISBP XX ID WRKY22:M1690_1.02:CISBP XX NA WRKY22 XX DE WRKY22 XX OS Arabidopsis thaliana XX BF 11823; XX P0 A C G T 01 28 24 23 25 w 02 32 19 23 26 w 03 34 16 33 17 r 04 13 8 61 18 g 05 16 4 2 78 T 06 21 62 9 8 c 07 60 15 7 18 a 08 55 6 22 17 a 09 28 38 13 21 m 10 23 22 30 25 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY22:M1690_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY47/M1691_1.02/CISBP XX ID WRKY47:M1691_1.02:CISBP XX NA WRKY47 XX DE WRKY47 XX OS Arabidopsis thaliana XX BF 11824; XX P0 A C G T 01 37 21 21 21 a 02 39 14 14 33 w 03 48 4 44 4 r 04 17 0 83 0 G 05 0 0 0 100 T 06 25 75 0 0 C 07 100 0 0 0 A 08 92 0 0 8 A 09 5 79 4 12 C 10 11 11 59 19 g 11 28 30 21 21 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY47:M1691_1.02:CISBP XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY29/M1692_1.02/CISBP XX ID WRKY29:M1692_1.02:CISBP XX NA WRKY29 XX DE WRKY29 XX OS Arabidopsis thaliana XX BF 11825; XX P0 A C G T 01 28 24 22 26 w 02 29 21 23 27 w 03 33 17 34 16 r 04 7 2 72 19 G 05 7 0 0 93 T 06 19 74 3 4 C 07 61 14 9 16 a 08 54 7 23 16 a 09 28 40 13 19 m 10 23 23 31 23 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY29:M1692_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY11/M1693_1.02/CISBP XX ID WRKY11:M1693_1.02:CISBP XX NA WRKY11 XX DE WRKY11 XX OS Arabidopsis thaliana XX BF 2988; XX P0 A C G T 01 36 15 22 27 w 02 41 11 32 16 r 03 8 4 78 10 G 04 9 0 1 90 T 05 12 81 3 4 C 06 83 6 6 5 A 07 78 0 17 5 A 08 21 55 7 17 c 09 18 16 44 22 g 10 25 21 27 27 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY11:M1693_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY18/M1694_1.02/CISBP XX ID WRKY18:M1694_1.02:CISBP XX NA WRKY18 XX DE WRKY18 XX OS Arabidopsis thaliana XX BF 11826; XX P0 A C G T 01 29 26 21 24 m 02 26 28 15 31 h 03 39 2 58 1 r 04 0 0 99 1 G 05 0 0 0 100 T 06 0 100 0 0 C 07 98 1 0 1 A 08 96 1 1 2 A 09 19 37 29 15 s 10 21 25 40 14 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY18:M1694_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY62/M1695_1.02/CISBP XX ID WRKY62:M1695_1.02:CISBP XX NA WRKY62 XX DE WRKY62 XX OS Arabidopsis thaliana XX BF 11827; XX P0 A C G T 01 13 12 0 75 T 02 31 0 69 0 R 03 0 0 100 0 G 04 0 0 0 100 T 05 0 100 0 0 C 06 100 0 0 0 A 07 100 0 0 0 A 08 27 73 0 0 M XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY62:M1695_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY75/M1696_1.02/CISBP XX ID WRKY75:M1696_1.02:CISBP XX NA WRKY75 XX DE WRKY75 XX OS Arabidopsis thaliana XX BF 11828; XX P0 A C G T 01 30 28 14 28 h 02 50 2 48 0 r 03 0 0 100 0 G 04 0 0 0 100 T 05 0 100 0 0 C 06 100 0 0 0 A 07 100 0 0 0 A 08 26 62 0 12 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY75:M1696_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY30/M1697_1.02/CISBP XX ID WRKY30:M1697_1.02:CISBP XX NA WRKY30 XX DE WRKY30 XX OS Arabidopsis thaliana XX BF 11829; XX P0 A C G T 01 40 13 43 4 r 02 0 1 99 0 G 03 0 0 0 100 T 04 2 98 0 0 C 05 90 6 1 3 A 06 86 2 8 4 A 07 6 79 4 11 C 08 13 23 48 16 g 09 20 33 27 20 s 10 21 22 25 32 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY30:M1697_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY8/M1698_1.02/CISBP XX ID WRKY8:M1698_1.02:CISBP XX NA WRKY8 XX DE WRKY8 XX OS Arabidopsis thaliana XX BF 11830; XX P0 A C G T 01 30 20 22 28 w 02 38 12 40 10 r 03 2 0 88 10 G 04 1 0 0 99 T 05 4 95 0 1 C 06 80 9 3 8 A 07 72 3 16 9 A 08 25 47 12 16 m 09 22 22 37 19 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY8:M1698_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY48/M1699_1.02/CISBP XX ID WRKY48:M1699_1.02:CISBP XX NA WRKY48 XX DE WRKY48 XX OS Arabidopsis thaliana XX BF 11831; XX P0 A C G T 01 25 24 27 24 r 02 26 23 26 25 d 03 33 15 41 11 r 04 2 0 87 11 G 05 2 0 0 98 T 06 6 93 0 1 C 07 66 14 7 13 a 08 53 8 23 16 a 09 26 39 16 19 m 10 23 23 31 23 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY48:M1699_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY27/M1700_1.02/CISBP XX ID WRKY27:M1700_1.02:CISBP XX NA WRKY27 XX DE WRKY27 XX OS Arabidopsis thaliana XX BF 11832; XX P0 A C G T 01 27 22 25 26 d 02 29 18 38 15 r 03 4 0 85 11 G 04 6 0 1 93 T 05 14 76 5 5 C 06 58 16 12 14 a 07 51 9 23 17 a 08 26 40 16 18 m 09 24 23 32 21 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY27:M1700_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATWRKY2/M1701_1.02/CISBP XX ID ATWRKY2:M1701_1.02:CISBP XX NA ATWRKY2 XX DE ATWRKY2 XX OS Arabidopsis thaliana XX BF 11833; XX P0 A C G T 01 11 39 25 25 c 02 28 1 71 0 R 03 0 0 100 0 G 04 0 0 0 100 T 05 0 100 0 0 C 06 96 2 2 0 A 07 81 0 16 3 A 08 27 53 7 13 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATWRKY2:M1701_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY51/M1702_1.02/CISBP XX ID WRKY51:M1702_1.02:CISBP XX NA WRKY51 XX DE WRKY51 XX OS Arabidopsis thaliana XX BF 11834; XX P0 A C G T 01 28 24 21 27 w 02 28 28 16 28 h 03 39 11 44 6 r 04 5 0 85 10 G 05 13 0 0 87 T 06 12 82 3 3 C 07 71 15 4 10 A 08 70 7 9 14 A 09 30 38 16 16 m 10 23 25 33 19 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY51:M1702_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 0700010421/M1703_1.02/CISBP XX ID 0700010421:M1703_1.02:CISBP XX NA 0700010421 XX DE 0700010421 XX OS Ostreococcus tauri XX BF 11835; XX P0 A C G T 01 43 16 16 25 w 02 16 29 7 48 y 03 29 2 67 2 r 04 11 2 76 11 G 05 11 2 2 85 T 06 9 83 0 8 C 07 91 0 0 9 A 08 100 0 0 0 A 09 9 73 9 9 C 10 27 18 37 18 r 11 23 23 31 23 g 12 23 23 23 31 t 13 31 23 23 23 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=0700010421:M1703_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC fgenesh1_pg.C_Chr_11.0001000193/M1704_1.02/CISBP XX ID fgenesh1_pg.C_Chr_11.0001000193:M1704_1.02:CISBP XX NA fgenesh1_pg.C_Chr_11.0001000193 XX DE fgenesh1_pg.C_Chr_11.0001000193 XX OS Ostreococcus tauri XX BF 11836; XX P0 A C G T 01 24 26 23 27 y 02 34 12 45 9 r 03 9 2 79 10 G 04 12 0 0 88 T 05 16 75 4 5 C 06 76 8 4 12 A 07 65 3 18 14 a 08 25 42 13 20 m 09 23 23 33 21 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=fgenesh1_pg.C_Chr_11.0001000193:M1704_1.02:CISBP XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC O22676_ANTMA/M2679_1.02/CISBP XX ID O22676_ANTMA:M2679_1.02:CISBP XX NA O22676_ANTMA XX DE O22676_ANTMA XX OS Antirrhinum majus XX BF 1339; XX P0 A C G T 01 0 0 100 0 G 02 78 0 22 0 A 03 0 0 0 100 T 04 0 0 100 0 G 05 100 0 0 0 A 06 0 100 0 0 C 07 0 0 100 0 G 08 0 0 0 100 T 09 0 0 100 0 G 10 0 0 94 6 G 11 0 100 0 0 C 12 56 44 0 0 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=O22676_ANTMA:M2679_1.02:CISBP XX RN [1]; RX PUBMED: 16381825 RL Matys V, Kel-Margoulis O.V, Fricke E, Liebich I, Land S, Barre-Dirrie A, Reuter I, Chekmenev D, Krull M, Hornischer K, Voss N, Stegmaier P, Lewicki-Potapov B, Saxel H, Kel A.E, Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34:D108-10 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC O22677_ANTMA/M2681_1.02/CISBP XX ID O22677_ANTMA:M2681_1.02:CISBP XX NA O22677_ANTMA XX DE O22677_ANTMA XX OS Antirrhinum majus XX BF 1340; XX P0 A C G T 01 5 0 95 0 G 02 45 0 55 0 r 03 0 0 0 100 T 04 0 0 100 0 G 05 100 0 0 0 A 06 0 100 0 0 C 07 0 0 100 0 G 08 0 0 0 100 T 09 0 0 100 0 G 10 0 0 100 0 G 11 18 82 0 0 C 12 5 95 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=O22677_ANTMA:M2681_1.02:CISBP XX RN [1]; RX PUBMED: 16381825 RL Matys V, Kel-Margoulis O.V, Fricke E, Liebich I, Land S, Barre-Dirrie A, Reuter I, Chekmenev D, Krull M, Hornischer K, Voss N, Stegmaier P, Lewicki-Potapov B, Saxel H, Kel A.E, Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34:D108-10 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Q9SXJ0_TOBAC/M2786_1.02/CISBP XX ID Q9SXJ0_TOBAC:M2786_1.02:CISBP XX NA Q9SXJ0_TOBAC XX DE Q9SXJ0_TOBAC XX OS Nicotiana tabacum XX BF 2042; XX P0 A C G T 01 5 85 0 10 C 02 10 75 5 10 C 03 70 5 5 20 A 04 15 75 5 5 C 05 25 50 15 10 m 06 70 0 0 30 W 07 40 25 15 20 m 08 50 30 10 10 m 09 20 40 15 25 y 10 20 45 5 30 y 11 25 55 10 10 m 12 10 30 25 35 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Q9SXJ0_TOBAC:M2786_1.02:CISBP XX RN [1]; RX PUBMED: 16381825 RL Matys V, Kel-Margoulis O.V, Fricke E, Liebich I, Land S, Barre-Dirrie A, Reuter I, Chekmenev D, Krull M, Hornischer K, Voss N, Stegmaier P, Lewicki-Potapov B, Saxel H, Kel A.E, Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34:D108-10 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GRMZM2G015534/M2843_1.02/CISBP XX ID GRMZM2G015534:M2843_1.02:CISBP XX NA GRMZM2G015534 XX DE GRMZM2G015534 XX OS Zea mays XX BF 10718; XX P0 A C G T 01 0 40 0 60 y 02 100 0 0 0 A 03 0 0 0 100 T 04 0 100 0 0 C 05 0 0 0 100 T 06 100 0 0 0 A 07 0 100 0 0 C 08 0 0 100 0 G 09 0 0 0 100 T 10 0 0 100 0 G 11 0 0 100 0 G 12 100 0 0 0 A 13 100 0 0 0 A 14 0 0 0 100 T 15 0 0 100 0 G 16 100 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GRMZM2G015534:M2843_1.02:CISBP XX RN [1]; RX PUBMED: 16381825 RL Matys V, Kel-Margoulis O.V, Fricke E, Liebich I, Land S, Barre-Dirrie A, Reuter I, Chekmenev D, Krull M, Hornischer K, Voss N, Stegmaier P, Lewicki-Potapov B, Saxel H, Kel A.E, Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34:D108-10 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYBP_MAIZE/M2851_1.02/CISBP XX ID MYBP_MAIZE:M2851_1.02:CISBP XX NA MYBP_MAIZE XX DE MYBP_MAIZE XX OS Zea mays XX BF 757; XX P0 A C G T 01 19 42 22 17 c 02 22 11 36 31 k 03 3 0 94 3 G 04 0 0 100 0 G 05 0 0 0 100 T 06 53 0 0 47 w 07 14 0 86 0 G 08 8 8 78 6 G 09 11 12 8 69 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYBP_MAIZE:M2851_1.02:CISBP XX RN [1]; RX PUBMED: 16381825 RL Matys V, Kel-Margoulis O.V, Fricke E, Liebich I, Land S, Barre-Dirrie A, Reuter I, Chekmenev D, Krull M, Hornischer K, Voss N, Stegmaier P, Lewicki-Potapov B, Saxel H, Kel A.E, Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34:D108-10 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Q9ZWK1_TOBAC/M2889_1.02/CISBP XX ID Q9ZWK1_TOBAC:M2889_1.02:CISBP XX NA Q9ZWK1_TOBAC XX DE Q9ZWK1_TOBAC XX OS Nicotiana tabacum XX BF 2036; XX P0 A C G T 01 80 7 7 6 A 02 1 24 0 75 T 03 0 1 99 0 G 04 36 14 3 47 w 05 99 0 1 0 A 06 1 56 2 41 y 07 6 70 15 9 C 08 3 9 5 83 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Q9ZWK1_TOBAC:M2889_1.02:CISBP XX RN [1]; RX PUBMED: 16381825 RL Matys V, Kel-Margoulis O.V, Fricke E, Liebich I, Land S, Barre-Dirrie A, Reuter I, Chekmenev D, Krull M, Hornischer K, Voss N, Stegmaier P, Lewicki-Potapov B, Saxel H, Kel A.E, Wingender E. TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic acids research 34:D108-10 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF3/MA0930.1/JASPAR XX ID ABF3:MA0930.1:JASPAR XX NA ABF3 XX DE ABF3 XX OS Arabidopsis thaliana XX BF 3859; XX P0 A C G T 01 971 10 10 10 A 02 10 971 10 10 C 03 971 10 10 10 A 04 10 971 10 10 C 05 10 10 971 10 G 06 10 10 10 971 T 07 10 10 971 10 G 08 10 10 10 971 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF3:MA0930.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 11005831 RL Uno Y, Furihata T, Abe H, Yoshida R, Shinozaki K, Yamaguchi-Shinozaki K. Arabidopsis basic leucine zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions. Proc Natl Acad Sci U S A 97:11632-7 (2000). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI5/MA0931.1/JASPAR XX ID ABI5:MA0931.1:JASPAR XX NA ABI5 XX DE ABI5 XX OS Arabidopsis thaliana XX BF 3091; XX P0 A C G T 01 181 257 257 306 b 02 87 87 660 167 g 03 608 314 0 78 m 04 0 922 78 0 C 05 999 0 0 0 A 06 0 999 0 0 C 07 0 0 999 0 G 08 0 0 0 999 T 09 152 70 709 70 G 10 164 164 337 336 k XX BS 55013; BS 55014; BS 55015; BS 55016; BS 55017; BS 55018; BS 55019; BS 55020; BS 55021; BS 55022; BS 55023; BS 55024; BS 55025; BS 55026; BS 55027; BS 55028; BS 55029; BS 55030; BS 55031; BS 55032; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI5:MA0931.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 12376636 RL Kim S. Y., Ma J., Perret P., Li Z., Thomas T. L. Arabidopsis ABI5 subfamily members have distinct DNA-binding and transcriptional activities.. Plant Physiol. 130:688-697 (2002). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC025/MA0935.1/JASPAR XX ID NAC025:MA0935.1:JASPAR XX NA NAC025 XX DE NAC025 XX OS Arabidopsis thaliana XX BF 11519; XX P0 A C G T 01 1 421 1 578 y 02 965 0 35 0 A 03 0 999 0 0 C 04 0 0 999 0 G 05 0 276 69 655 y 06 827 173 0 0 A 07 930 0 0 69 A 08 50 599 50 300 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC025:MA0935.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC080/MA0939.1/JASPAR XX ID NAC080:MA0939.1:JASPAR XX NA NAC080 XX DE NAC080 XX OS Arabidopsis thaliana XX BF 12094; XX P0 A C G T 01 665 1 222 112 a 02 1 691 1 308 Y 03 998 1 1 1 A 04 1 998 1 1 C 05 1 1 998 1 G 06 1 855 1 143 C 07 784 72 1 143 A 08 998 1 1 1 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC080:MA0939.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AP1/MA0940.1/JASPAR XX ID AP1:MA0940.1:JASPAR XX NA AP1 XX DE AP1 XX OS Arabidopsis thaliana XX BF 17348; XX P0 A C G T 01 734 799 32 57 m 02 84 941 39 558 y 03 1323 46 35 218 A 04 1134 19 152 317 A 05 1551 10 15 46 A 06 1277 15 24 306 A 07 1191 23 252 156 A 08 682 21 257 662 w 09 653 12 930 27 r 10 133 60 1354 75 G 11 1146 153 170 153 A 12 1279 122 168 53 A 13 1257 22 162 181 A XX BS 55073; BS 55074; BS 55075; BS 55076; BS 55077; BS 55078; BS 55079; BS 55080; BS 55081; BS 55082; BS 55083; BS 55084; BS 55085; BS 55086; BS 55087; BS 55088; BS 55089; BS 55090; BS 55091; BS 55092; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AP1:MA0940.1:JASPAR XX CC ChIP-seq XX RN [1]; RX PUBMED: 8774892 RL Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 25361952 RL Heyndrickx KS, Van de Velde J, Wang C, Weigel D, Vandepoele K. A functional and evolutionary perspective on transcription factor binding in Arabidopsis thaliana. Plant Cell 26:3894-910 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF2/MA0941.1/JASPAR XX ID ABF2:MA0941.1:JASPAR XX NA ABF2 XX DE ABF2 XX OS Arabidopsis thaliana XX BF 12100; XX P0 A C G T 01 231 308 231 231 c 02 308 231 231 231 a 03 191 268 191 350 y 04 274 120 403 202 r 05 699 177 103 21 A 06 0 840 0 159 C 07 999 0 0 0 A 08 0 917 0 82 C 09 19 19 942 19 G 10 19 19 19 942 T 11 218 59 664 59 g 12 213 130 287 371 k 13 229 229 229 312 t XX BS 55093; BS 55094; BS 55095; BS 55096; BS 55097; BS 55098; BS 55099; BS 55100; BS 55101; BS 55102; BS 55103; BS 55104; BS 55105; BS 55106; BS 55107; BS 55108; BS 55109; BS 55110; BS 55111; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF2:MA0941.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 11005831 RL Uno Y, Furihata T, Abe H, Yoshida R, Shinozaki K, Yamaguchi-Shinozaki K. Arabidopsis basic leucine zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions. Proc Natl Acad Sci U S A 97:11632-7 (2000). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF1/MA0942.1/JASPAR XX ID ARF1:MA0942.1:JASPAR XX NA ARF1 XX DE ARF1 XX OS Arabidopsis thaliana XX BF 2866; XX P0 A C G T 01 722 2 276 1 R 02 3 993 1 4 C 03 4 993 2 2 C 04 4 2 992 1 G 05 989 3 1 7 A 06 2 993 2 2 C 07 901 4 88 8 A 08 262 220 207 312 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF1:MA0942.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9188533 RL Ulmasov T., Hagen G., Guilfoyle T. J. ARF1, a transcription factor that binds to auxin response elements. Science 276:1865-1868 (1997). RN [2]; RX PUBMED: 24485461 RL Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF5/MA0943.1/JASPAR XX ID ARF5:MA0943.1:JASPAR XX NA ARF5 XX DE ARF5 XX OS Arabidopsis thaliana XX BF 3649; XX P0 A C G T 01 303 160 477 59 r 02 9 969 15 8 C 03 97 898 4 2 C 04 12 1 985 2 G 05 952 1 46 1 A 06 2 992 3 3 C 07 773 224 2 2 A 08 491 98 218 193 a XX BS 55112; BS 55113; BS 55114; BS 55115; BS 55116; BS 55117; BS 55118; BS 55119; BS 55120; BS 55121; BS 55122; BS 55123; BS 55124; BS 55125; BS 55126; BS 55127; BS 55128; BS 55129; BS 55130; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF5:MA0943.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 24485461 RL Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 25002510 RL Zhang JY, He SB, Li L, Yang HQ. Auxin inhibits stomatal development through MONOPTEROS repression of a mobile peptide gene STOMAGEN in mesophyll. Proc Natl Acad Sci U S A : (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF8/MA0944.1/JASPAR XX ID ARF8:MA0944.1:JASPAR XX NA ARF8 XX DE ARF8 XX OS Arabidopsis thaliana XX BF 3650; XX P0 A C G T 01 270 233 204 293 w 02 225 259 106 410 y 03 4 0 90 906 T 04 38 1 900 60 G 05 0 13 0 987 T 06 54 863 2 82 C 07 61 27 798 114 G 08 121 138 651 89 g 09 228 337 217 219 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF8:MA0944.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 24485461 RL Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR1/MA0945.1/JASPAR XX ID ARR1:MA0945.1:JASPAR XX NA ARR1 XX DE ARR1 XX OS Arabidopsis thaliana XX BF 7490; XX P0 A C G T 01 406 168 208 218 a 02 172 292 343 192 s 03 297 466 139 99 m 04 306 83 564 47 r 05 423 22 235 320 w 06 965 0 0 34 A 07 21 1 1 977 T 08 56 897 4 43 C 09 143 156 91 609 t 10 257 190 181 372 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR1:MA0945.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11135105 RL Sakai H, Aoyama T, Oka A. 2000. Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators. Plant J. 24:703-11. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR18/MA0948.1/JASPAR XX ID ARR18:MA0948.1:JASPAR XX NA ARR18 XX DE ARR18 XX OS Arabidopsis thaliana XX BF 12093; XX P0 A C G T 01 324 225 225 225 a 02 202 202 202 394 t 03 274 370 178 178 m 04 329 186 194 290 w 05 834 25 25 115 A 06 0 88 912 0 G 07 999 0 0 0 A 08 0 0 0 999 T 09 728 25 25 222 A 10 48 673 48 231 c 11 159 72 697 72 G 12 341 243 264 151 r 13 225 225 225 326 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR18:MA0948.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR2/MA0949.1/JASPAR XX ID ARR2:MA0949.1:JASPAR XX NA ARR2 XX DE ARR2 XX OS Arabidopsis thaliana XX BF 7491; XX P0 A C G T 01 174 257 394 174 s 02 338 572 45 45 m 03 214 0 786 0 G 04 476 0 214 309 w 05 1000 0 0 0 A 06 0 0 0 1000 T 07 0 1000 0 0 C 08 0 0 0 1000 T 09 162 76 76 687 T 10 205 205 205 386 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR2:MA0949.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-16/MA0951.1/JASPAR XX ID ATHB-16:MA0951.1:JASPAR XX NA ATHB-16 XX DE ATHB-16 XX OS Arabidopsis thaliana XX BF 11174; XX P0 A C G T 01 72 214 1 713 T 02 999 0 0 0 A 03 999 0 0 0 A 04 0 0 0 999 T 05 545 318 137 0 m 06 999 0 0 0 A 07 0 0 0 999 T 08 67 1 67 865 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-16:MA0951.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-6/MA0953.1/JASPAR XX ID ATHB-6:MA0953.1:JASPAR XX NA ATHB-6 XX DE ATHB-6 XX OS Arabidopsis thaliana XX BF 11165; XX P0 A C G T 01 177 252 287 284 b 02 149 524 85 243 c 03 745 89 73 92 A 04 886 71 1 42 A 05 20 6 1 972 T 06 356 310 128 206 m 07 924 5 38 32 A 08 106 66 130 698 T 09 234 111 266 389 k XX BS 55151; BS 55152; BS 55153; BS 55154; BS 55155; BS 55156; BS 55157; BS 55158; BS 55159; BS 55160; BS 55161; BS 55162; BS 55163; BS 55164; BS 55165; BS 55166; BS 55167; BS 55168; BS 55169; BS 55170; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-6:MA0953.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-7/MA0954.1/JASPAR XX ID ATHB-7:MA0954.1:JASPAR XX NA ATHB-7 XX DE ATHB-7 XX OS Arabidopsis thaliana XX BF 12011; XX P0 A C G T 01 152 338 152 358 y 02 27 828 27 118 C 03 1000 0 0 0 A 04 1000 0 0 0 A 05 0 0 0 1000 T 06 0 1000 0 0 C 07 1000 0 0 0 A 08 291 0 0 709 W 09 183 98 190 528 t 10 223 223 330 223 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-7:MA0954.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC POPTR/MA0955.1/JASPAR XX ID POPTR:MA0955.1:JASPAR XX NA POPTR XX DE POPTR XX OS cottonwood; Populus trichocarpa XX BF 11685; BF 17938; XX P0 A C G T 01 201 266 325 209 s 02 9 29 954 7 G 03 8 11 99 882 T 04 951 43 5 0 A 05 153 706 29 112 C 06 41 80 859 19 G 07 188 50 696 67 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=POPTR:MA0955.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BEE2/MA0956.1/JASPAR XX ID BEE2:MA0956.1:JASPAR XX NA BEE2 XX DE BEE2 XX OS Arabidopsis thaliana XX BF 17491; XX P0 A C G T 01 256 253 236 255 h 02 211 229 342 218 g 03 136 722 38 104 C 04 893 0 33 74 A 05 23 820 0 157 C 06 157 0 820 23 G 07 74 33 0 893 T 08 104 38 722 136 G 09 218 342 229 211 c 10 255 236 253 256 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BEE2:MA0956.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 12897250 RL Toledo-Ortiz G., Huq E., Quail P. H. The Arabidopsis basic/helix-loop-helix transcription factor family.. Plant Cell 15:1749-1770 (2003). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BHLH3/MA0957.1/JASPAR XX ID BHLH3:MA0957.1:JASPAR XX NA BHLH3 XX DE BHLH3 XX OS Arabidopsis thaliana XX BF 11972; XX P0 A C G T 01 258 94 603 44 r 02 45 930 14 11 C 03 950 7 20 22 A 04 10 937 12 42 C 05 42 12 937 10 G 06 22 20 7 950 T 07 11 14 930 45 G 08 44 603 94 258 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BHLH3:MA0957.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24465948 RL Fonseca S, Fernández-Calvo P, Fernández GM, DÃez-DÃaz M, Gimenez-Ibanez S, López-Vidriero I, Godoy M, Fernández-Barbero G, Van Leene J, De Jaeger G, Franco-Zorrilla JM, Solano R. bHLH003, bHLH013 and bHLH017 are new targets of JAZ repressors negatively regulating JA responses. PLoS One : (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BHLH13/MA0958.1/JASPAR XX ID BHLH13:MA0958.1:JASPAR XX NA BHLH13 XX DE BHLH13 XX OS Arabidopsis thaliana XX BF 10512; XX P0 A C G T 01 295 116 569 20 r 02 53 945 1 1 C 03 992 2 3 4 A 04 1 952 1 46 C 05 15 1 982 1 G 06 4 4 1 991 T 07 1 2 987 10 G 08 38 696 65 201 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BHLH13:MA0958.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24465948 RL Fonseca S, Fernández-Calvo P, Fernández GM, DÃez-DÃaz M, Gimenez-Ibanez S, López-Vidriero I, Godoy M, Fernández-Barbero G, Van Leene J, De Jaeger G, Franco-Zorrilla JM, Solano R. bHLH003, bHLH013 and bHLH017 are new targets of JAZ repressors negatively regulating JA responses. PLoS One : (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AIB/MA0959.1/JASPAR XX ID AIB:MA0959.1:JASPAR XX NA AIB XX DE AIB XX OS Arabidopsis thaliana XX BF 12120; XX P0 A C G T 01 76 14 901 8 G 02 59 939 1 2 C 03 966 1 28 5 A 04 0 903 2 94 C 05 94 2 903 0 G 06 5 28 1 966 T 07 2 1 939 59 G 08 8 901 14 76 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AIB:MA0959.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24465948 RL Fonseca S, Fernández-Calvo P, Fernández GM, DÃez-DÃaz M, Gimenez-Ibanez S, López-Vidriero I, Godoy M, Fernández-Barbero G, Van Leene J, De Jaeger G, Franco-Zorrilla JM, Solano R. bHLH003, bHLH013 and bHLH017 are new targets of JAZ repressors negatively regulating JA responses. PLoS One : (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BHLH104/MA0960.1/JASPAR XX ID BHLH104:MA0960.1:JASPAR XX NA BHLH104 XX DE BHLH104 XX OS Arabidopsis thaliana XX BF 12062; XX P0 A C G T 01 130 26 822 22 G 02 15 74 866 45 G 03 6 994 0 0 C 04 996 0 4 0 A 05 0 999 0 1 C 06 1 0 999 0 G 07 0 4 0 996 T 08 0 0 994 6 G 09 45 866 74 15 C 10 22 822 26 130 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BHLH104:MA0960.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BHLH112/MA0961.1/JASPAR XX ID BHLH112:MA0961.1:JASPAR XX NA BHLH112 XX DE BHLH112 XX OS Arabidopsis thaliana; Oryza sativa Japonica Group XX BF 12075; XX P0 A C G T 01 221 250 306 222 s 02 0 1000 0 0 C 03 177 823 0 0 C 04 1000 0 0 0 A 05 0 1000 0 0 C 06 0 0 0 1000 T 07 0 0 0 1000 T 08 0 0 1000 0 G 09 218 343 217 223 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BHLH112:MA0961.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BHLH34/MA0962.1/JASPAR XX ID BHLH34:MA0962.1:JASPAR XX NA BHLH34 XX DE BHLH34 XX OS Arabidopsis thaliana XX BF 10516; XX P0 A C G T 01 154 39 653 154 g 02 0 999 0 0 C 03 727 0 242 31 A 04 0 848 0 152 C 05 0 0 999 0 G 06 0 0 0 999 T 07 0 0 999 0 G 08 96 143 476 286 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BHLH34:MA0962.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BHLH78/MA0963.1/JASPAR XX ID BHLH78:MA0963.1:JASPAR XX NA BHLH78 XX DE BHLH78 XX OS Arabidopsis thaliana XX BF 10523; XX P0 A C G T 01 10 10 971 10 G 02 10 971 10 10 C 03 971 10 10 10 A 04 10 971 10 10 C 05 10 10 971 10 G 06 10 10 10 971 T 07 10 10 971 10 G 08 10 971 10 10 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BHLH78:MA0963.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM1/MA0964.1/JASPAR XX ID BIM1:MA0964.1:JASPAR XX NA BIM1 XX DE BIM1 XX OS Arabidopsis thaliana XX BF 17519; XX P0 A C G T 01 219 250 281 250 b 02 126 655 101 118 c 03 582 101 184 132 a 04 59 766 23 152 C 05 140 62 795 3 G 06 1 23 0 976 T 07 3 2 990 6 G 08 375 301 148 176 m 09 147 344 242 268 y 10 257 262 257 225 v XX BS 55191; BS 55192; BS 55193; BS 55194; BS 55195; BS 55196; BS 55197; BS 55198; BS 55199; BS 55200; BS 55201; BS 55202; BS 55203; BS 55204; BS 55205; BS 55206; BS 55207; BS 55208; BS 55209; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM1:MA0964.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15680330 RL Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM2/MA0965.1/JASPAR XX ID BIM2:MA0965.1:JASPAR XX NA BIM2 XX DE BIM2 XX OS Arabidopsis thaliana XX BF 10514; XX P0 A C G T 01 244 261 290 205 s 02 167 143 373 317 k 03 53 897 1 49 C 04 962 0 24 14 A 05 22 885 0 92 C 06 92 0 885 22 G 07 14 24 0 962 T 08 49 1 897 53 G 09 317 373 143 167 m 10 205 290 261 244 s XX BS 55210; BS 55211; BS 55212; BS 55213; BS 55214; BS 55215; BS 55216; BS 55217; BS 55218; BS 55219; BS 55220; BS 55221; BS 55222; BS 55223; BS 55224; BS 55225; BS 55226; BS 55227; BS 55228; BS 55229; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM2:MA0965.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15680330 RL Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM3/MA0966.1/JASPAR XX ID BIM3:MA0966.1:JASPAR XX NA BIM3 XX DE BIM3 XX OS Arabidopsis thaliana XX BF 10522; XX P0 A C G T 01 294 203 270 233 r 02 159 165 433 243 g 03 74 821 8 96 C 04 942 0 25 33 A 05 15 918 0 67 C 06 67 0 918 15 G 07 33 25 0 942 T 08 96 8 821 74 G 09 243 433 165 159 c 10 233 270 203 294 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM3:MA0966.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15680330 RL Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP68/MA0968.1/JASPAR XX ID bZIP68:MA0968.1:JASPAR XX NA bZIP68 XX DE bZIP68 XX OS Arabidopsis thaliana XX BF 10635; XX P0 A C G T 01 252 336 123 289 h 02 184 332 264 220 s 03 621 131 137 111 a 04 70 651 148 131 c 05 116 163 634 88 g 06 28 58 0 914 T 07 32 0 951 17 G 08 2 73 542 382 k 09 289 476 134 101 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP68:MA0968.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CMTA2/MA0969.1/JASPAR XX ID CMTA2:MA0969.1:JASPAR XX NA CMTA2 XX DE CMTA2 XX OS Arabidopsis thaliana XX BF 10935; XX P0 A C G T 01 313 203 220 264 w 02 327 237 176 260 w 03 393 121 243 243 a 04 220 438 306 36 s 05 26 955 8 11 C 06 18 11 970 1 G 07 31 682 7 280 Y 08 8 7 970 15 G 09 7 11 54 928 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CMTA2:MA0969.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 17689537 RL Finkler A, Ashery-Padan R, Fromm H. CAMTAs: calmodulin-binding transcription activators from plants to human. FEBS Lett 581:3893-8 (2007). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CMTA3/MA0970.1/JASPAR XX ID CMTA3:MA0970.1:JASPAR XX NA CMTA3 XX DE CMTA3 XX OS Arabidopsis thaliana XX BF 7521; XX P0 A C G T 01 233 540 184 43 c 02 14 974 5 8 C 03 32 0 962 6 G 04 68 664 1 267 y 05 37 0 963 0 G 06 1 1 0 998 T 07 231 274 211 285 y 08 290 247 250 213 r 09 241 258 251 251 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CMTA3:MA0970.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 17689537 RL Finkler A, Ashery-Padan R, Fromm H. CAMTAs: calmodulin-binding transcription activators from plants to human. FEBS Lett 581:3893-8 (2007). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB1A/MA0971.1/JASPAR XX ID DREB1A:MA0971.1:JASPAR XX NA DREB1A XX DE DREB1A XX OS Arabidopsis thaliana XX BF 7498; XX P0 A C G T 01 590 118 126 166 a 02 139 159 137 565 t 03 2 0 997 1 G 04 10 14 3 973 T 05 5 991 4 1 C 06 0 0 994 6 G 07 48 0 948 3 G 08 16 504 19 461 y 09 341 240 279 140 r 10 322 205 322 152 r XX BS 55230; BS 55231; BS 55232; BS 55233; BS 55234; BS 55235; BS 55236; BS 55237; BS 55238; BS 55239; BS 55240; BS 55241; BS 55242; BS 55243; BS 55244; BS 55245; BS 55246; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB1A:MA0971.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDF2/MA0973.1/JASPAR XX ID CDF2:MA0973.1:JASPAR XX NA CDF2 XX DE CDF2 XX OS Arabidopsis thaliana XX BF 11004; XX P0 A C G T 01 334 284 235 148 m 02 608 92 150 150 a 03 693 16 41 250 W 04 980 10 4 5 A 05 979 10 2 9 A 06 868 29 81 22 A 07 17 7 969 6 G 08 53 295 154 498 y 09 328 77 395 200 r 10 299 282 155 264 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDF2:MA0973.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 7995527 RL Iratni R, Baeza L, Andreeva A, Mache R, Lerbs-Mache S. Regulation of rDNA transcription in chloroplasts: promoter exclusion by constitutive repression. Genes Dev 8:2928-38 (1994). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDF3/MA0974.1/JASPAR XX ID CDF3:MA0974.1:JASPAR XX NA CDF3 XX DE CDF3 XX OS Arabidopsis thaliana XX BF 11002; XX P0 A C G T 01 447 143 220 191 a 02 607 29 65 298 w 03 994 3 1 2 A 04 989 5 0 6 A 05 880 27 83 10 A 06 19 7 969 6 G 07 70 291 160 479 y 08 222 102 495 180 g 09 286 343 169 202 m XX BS 55247; BS 55248; BS 55249; BS 55250; BS 55251; BS 55252; BS 55253; BS 55254; BS 55255; BS 55256; BS 55257; BS 55258; BS 55259; BS 55260; BS 55261; BS 55262; BS 55263; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDF3:MA0974.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF2/MA0975.1/JASPAR XX ID CRF2:MA0975.1:JASPAR XX NA CRF2 XX DE CRF2 XX OS Arabidopsis thaliana XX BF 10424; XX P0 A C G T 01 44 478 348 131 s 02 108 783 81 27 C 03 0 0 999 0 G 04 0 977 23 0 C 05 0 999 0 0 C 06 0 0 999 0 G 07 23 931 0 46 C 08 118 735 59 88 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF2:MA0975.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF4/MA0976.1/JASPAR XX ID CRF4:MA0976.1:JASPAR XX NA CRF4 XX DE CRF4 XX OS Arabidopsis thaliana XX BF 10425; XX P0 A C G T 01 70 326 535 70 s 02 108 769 62 62 C 03 0 0 1000 0 G 04 0 974 25 0 C 05 0 1000 0 0 C 06 0 13 987 0 G 07 68 756 68 108 C 08 97 790 65 49 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF4:MA0976.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF1.8/MA0981.1/JASPAR XX ID DOF1.8:MA0981.1:JASPAR XX NA DOF1.8 XX DE DOF1.8 XX OS Arabidopsis thaliana XX BF 10998; XX P0 A C G T 01 251 259 256 234 v 02 321 197 250 233 a 03 415 100 135 350 w 04 812 72 38 77 A 05 831 64 3 102 A 06 658 233 27 83 a 07 65 23 846 65 G 08 170 241 231 359 t 09 268 189 270 273 d 10 288 209 269 234 r XX BS 55264; BS 55265; BS 55266; BS 55267; BS 55268; BS 55254; BS 55269; BS 55270; BS 55271; BS 55272; BS 55273; BS 55274; BS 55275; BS 55276; BS 55277; BS 55278; BS 55279; BS 55280; BS 55281; BS 55282; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF1.8:MA0981.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF2.4/MA0982.1/JASPAR XX ID DOF2.4:MA0982.1:JASPAR XX NA DOF2.4 XX DE DOF2.4 XX OS Arabidopsis thaliana XX BF 10999; XX P0 A C G T 01 381 171 233 215 a 02 426 90 127 356 w 03 807 71 18 104 A 04 815 66 1 118 A 05 658 252 16 75 m 06 81 73 762 84 G 07 177 242 210 371 t XX BS 55283; BS 55284; BS 55285; BS 55286; BS 55287; BS 55288; BS 55289; BS 55290; BS 55291; BS 55292; BS 55293; BS 55294; BS 55295; BS 55296; BS 55297; BS 55298; BS 55299; BS 55300; BS 55301; BS 55302; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF2.4:MA0982.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF5.6/MA0983.1/JASPAR XX ID DOF5.6:MA0983.1:JASPAR XX NA DOF5.6 XX DE DOF5.6 XX OS Arabidopsis thaliana XX BF 11007; XX P0 A C G T 01 254 257 262 228 v 02 364 170 227 239 a 03 432 84 108 376 w 04 955 35 1 10 A 05 928 40 1 32 A 06 613 308 56 24 m 07 50 28 884 38 G 08 152 247 213 388 t XX BS 55303; BS 55304; BS 55305; BS 55306; BS 55307; BS 55308; BS 55309; BS 55310; BS 55311; BS 55312; BS 55313; BS 55314; BS 55315; BS 55316; BS 55317; BS 55318; BS 55319; BS 55320; BS 55321; BS 55322; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF5.6:MA0983.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DRE1C/MA0985.1/JASPAR XX ID DRE1C:MA0985.1:JASPAR XX NA DRE1C XX DE DRE1C XX OS Arabidopsis thaliana XX BF 7500; XX P0 A C G T 01 990 3 3 3 A 02 3 3 3 990 T 03 3 3 990 3 G 04 3 3 3 990 T 05 3 990 3 3 C 06 3 3 990 3 G 07 3 3 990 3 G 08 5 495 5 495 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DRE1C:MA0985.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_140773/MA0987.1/JASPAR XX ID PHYPADRAFT_140773:MA0987.1:JASPAR XX NA PHYPADRAFT_140773 XX DE PHYPADRAFT_140773 XX OS moss; Physcomitrella patens XX BF 11009; XX P0 A C G T 01 243 266 253 238 s 02 302 215 260 222 r 03 396 111 173 321 w 04 888 43 10 60 A 05 892 46 1 61 A 06 715 205 28 52 A 07 72 22 839 67 G 08 182 258 229 331 y 09 271 193 271 265 d 10 280 218 272 229 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_140773:MA0987.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_143875/MA0988.1/JASPAR XX ID PHYPADRAFT_143875:MA0988.1:JASPAR XX NA PHYPADRAFT_143875 XX DE PHYPADRAFT_143875 XX OS moss; Physcomitrella patens XX BF 10630; XX P0 A C G T 01 250 272 222 256 h 02 208 231 392 169 g 03 106 844 12 38 C 04 923 0 10 66 A 05 22 940 0 39 C 06 39 0 940 22 G 07 66 10 0 923 T 08 38 12 844 106 G 09 169 392 231 208 c 10 256 222 272 250 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_143875:MA0988.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_153324/MA0989.1/JASPAR XX ID PHYPADRAFT_153324:MA0989.1:JASPAR XX NA PHYPADRAFT_153324 XX DE PHYPADRAFT_153324 XX OS moss; Physcomitrella patens XX BF 11010; XX P0 A C G T 01 253 264 261 222 v 02 334 193 255 218 r 03 482 71 118 330 w 04 861 62 13 65 A 05 926 36 0 38 A 06 672 147 52 129 a 07 71 27 898 5 G 08 139 288 195 378 y 09 285 158 297 260 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_153324:MA0989.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EDT1/MA0990.1/JASPAR XX ID EDT1:MA0990.1:JASPAR XX NA EDT1 XX DE EDT1 XX OS Arabidopsis thaliana XX BF 11164; XX P0 A C G T 01 209 392 115 285 y 02 582 256 67 94 m 03 495 27 70 409 w 04 57 11 9 923 T 05 315 55 33 598 w 06 922 28 43 7 A 07 833 39 23 105 A 08 135 26 1 839 T 09 81 25 756 137 G 10 220 504 49 227 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EDT1:MA0990.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF4/MA0992.1/JASPAR XX ID ERF4:MA0992.1:JASPAR XX NA ERF4 XX DE ERF4 XX OS Arabidopsis thaliana XX BF 7507; XX P0 A C G T 01 169 517 225 90 c 02 65 726 115 94 C 03 24 18 952 6 G 04 12 899 83 6 C 05 12 976 12 0 C 06 6 6 988 0 G 07 56 662 131 150 c 08 123 800 39 39 C XX BS 55323; BS 55324; BS 55325; BS 55326; BS 55327; BS 55328; BS 55329; BS 55330; BS 55331; BS 55332; BS 55333; BS 55334; BS 55335; BS 55336; BS 55337; BS 55338; BS 55339; BS 55340; BS 55341; BS 55342; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF4:MA0992.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF7/MA0993.1/JASPAR XX ID ERF7:MA0993.1:JASPAR XX NA ERF7 XX DE ERF7 XX OS Arabidopsis thaliana XX BF 2877; XX P0 A C G T 01 263 442 140 156 m 02 77 14 874 35 G 03 48 868 84 0 C 04 129 770 36 65 C 05 90 25 875 10 G 06 146 456 132 266 y 07 212 593 66 128 c 08 419 174 210 198 a 09 276 208 198 317 w 10 279 209 201 312 w XX BS 55343; BS 55344; BS 55345; BS 55346; BS 55347; BS 55348; BS 55349; BS 55350; BS 55351; BS 55352; BS 55353; BS 55354; BS 55355; BS 55356; BS 55357; BS 55358; BS 55359; BS 55360; BS 55361; BS 55362; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF7:MA0993.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF8/MA0994.1/JASPAR XX ID ERF8:MA0994.1:JASPAR XX NA ERF8 XX DE ERF8 XX OS Arabidopsis thaliana XX BF 10416; XX P0 A C G T 01 202 572 97 129 c 02 38 0 959 3 G 03 9 908 64 19 C 04 114 807 31 48 C 05 75 53 841 31 G 06 154 452 151 243 c 07 197 605 58 139 c 08 449 175 184 192 a 09 273 206 185 336 w 10 290 206 192 311 w XX BS 55363; BS 55364; BS 55365; BS 55366; BS 55367; BS 55368; BS 55369; BS 55370; BS 55371; BS 55372; BS 55373; BS 55374; BS 55375; BS 55376; BS 55377; BS 55378; BS 55379; BS 55380; BS 55381; BS 55382; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF8:MA0994.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF039/MA0995.1/JASPAR XX ID ERF039:MA0995.1:JASPAR XX NA ERF039 XX DE ERF039 XX OS Arabidopsis thaliana XX BF 2592; XX P0 A C G T 01 250 236 274 240 r 02 165 242 120 473 t 03 43 11 912 34 G 04 115 86 140 660 t 05 4 989 2 5 C 06 6 2 980 12 G 07 19 8 965 7 G 08 20 416 39 524 y 09 244 170 395 190 g 10 261 225 316 198 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF039:MA0995.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF043/MA0996.1/JASPAR XX ID ERF043:MA0996.1:JASPAR XX NA ERF043 XX DE ERF043 XX OS Arabidopsis thaliana XX BF 2594; XX P0 A C G T 01 1 77 1 921 T 02 1 1 998 1 G 03 1 1 1 998 T 04 1 998 1 1 C 05 1 1 998 1 G 06 1 1 998 1 G 07 1 250 1 749 T 08 200 101 599 101 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF043:MA0996.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF069/MA0997.1/JASPAR XX ID ERF069:MA0997.1:JASPAR XX NA ERF069 XX DE ERF069 XX OS Arabidopsis thaliana XX BF 2584; XX P0 A C G T 01 193 294 315 197 s 02 197 471 175 157 c 03 18 0 982 0 G 04 61 828 86 24 C 05 98 680 76 146 C 06 179 0 820 0 G 07 138 419 212 230 c 08 224 404 193 180 c 09 351 209 231 209 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF069:MA0997.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF096/MA0998.1/JASPAR XX ID ERF096:MA0998.1:JASPAR XX NA ERF096 XX DE ERF096 XX OS Arabidopsis thaliana XX BF 10427; XX P0 A C G T 01 193 300 280 227 s 02 289 468 167 76 m 03 34 13 939 13 G 04 32 905 36 27 C 05 97 850 21 32 C 06 43 10 928 19 G 07 129 591 131 149 c 08 35 903 24 38 C 09 384 176 240 200 a 10 233 254 223 290 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF096:MA0998.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF098/MA0999.1/JASPAR XX ID ERF098:MA0999.1:JASPAR XX NA ERF098 XX DE ERF098 XX OS Arabidopsis thaliana XX BF 10423; XX P0 A C G T 01 215 317 270 198 s 02 248 356 222 173 c 03 96 63 804 37 G 04 26 746 166 62 C 05 151 769 10 70 C 06 192 39 756 13 G 07 190 448 170 192 c 08 125 677 99 98 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF098:MA0999.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF105/MA1000.1/JASPAR XX ID ERF105:MA1000.1:JASPAR XX NA ERF105 XX DE ERF105 XX OS Arabidopsis thaliana XX BF 10428; XX P0 A C G T 01 1 126 250 623 k 02 1 1 998 1 G 03 1 998 1 1 C 04 1 927 72 1 C 05 1 1 998 1 G 06 1 143 855 1 G 07 1 998 1 1 C 08 101 101 698 101 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF105:MA1000.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF11/MA1001.1/JASPAR XX ID ERF11:MA1001.1:JASPAR XX NA ERF11 XX DE ERF11 XX OS Arabidopsis thaliana XX BF 10415; XX P0 A C G T 01 206 313 316 165 s 02 213 494 123 169 c 03 109 0 887 4 G 04 25 835 55 85 C 05 145 704 51 99 C 06 131 10 828 31 G 07 190 383 154 273 y 08 258 490 77 175 m 09 424 162 181 233 a 10 276 196 204 324 w XX BS 55403; BS 55404; BS 55405; BS 55406; BS 55407; BS 55408; BS 55409; BS 55410; BS 55411; BS 55412; BS 55413; BS 55414; BS 55415; BS 55416; BS 55417; BS 55418; BS 55419; BS 55420; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF11:MA1001.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF112/MA1002.1/JASPAR XX ID ERF112:MA1002.1:JASPAR XX NA ERF112 XX DE ERF112 XX OS Arabidopsis thaliana XX BF 10420; XX P0 A C G T 01 189 240 392 180 g 02 100 436 346 118 s 03 223 605 117 54 c 04 15 1 913 72 G 05 0 997 2 1 C 06 42 951 4 3 C 07 36 28 903 33 G 08 171 518 101 211 c 09 236 661 37 67 c 10 478 133 240 150 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF112:MA1002.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF13/MA1004.1/JASPAR XX ID ERF13:MA1004.1:JASPAR XX NA ERF13 XX DE ERF13 XX OS Arabidopsis thaliana XX BF 2589; XX P0 A C G T 01 217 478 283 22 s 02 0 49 951 0 G 03 16 951 32 0 C 04 0 983 16 0 C 05 0 16 983 0 G 06 97 645 145 113 c 07 0 999 0 0 C 08 461 103 282 154 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF13:MA1004.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF3/MA1005.1/JASPAR XX ID ERF3:MA1005.1:JASPAR XX NA ERF3 XX DE ERF3 XX OS Arabidopsis thaliana XX BF 7506; XX P0 A C G T 01 80 760 80 80 C 02 14 0 985 0 G 03 0 885 114 0 C 04 0 985 14 0 C 05 14 0 985 0 G 06 57 643 186 114 c 07 79 904 0 16 C 08 581 23 279 116 r XX BS 55421; BS 55405; BS 55404; BS 55406; BS 55409; BS 55411; BS 55422; BS 55407; BS 55413; BS 55423; BS 55416; BS 55410; BS 55417; BS 55414; BS 55403; BS 55420; BS 55424; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF3:MA1005.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF6/MA1006.1/JASPAR XX ID ERF6:MA1006.1:JASPAR XX NA ERF6 XX DE ERF6 XX OS Arabidopsis thaliana XX BF 5590; XX P0 A C G T 01 291 352 179 179 m 02 78 221 166 535 t 03 0 0 1000 0 G 04 0 1000 0 0 C 05 0 1000 0 0 C 06 0 0 1000 0 G 07 0 88 912 0 G 08 0 1000 0 0 C 09 159 156 530 155 g 10 172 278 257 294 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF6:MA1006.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_173530/MA1007.1/JASPAR XX ID PHYPADRAFT_173530:MA1007.1:JASPAR XX NA PHYPADRAFT_173530 XX DE PHYPADRAFT_173530 XX OS moss; Physcomitrella patens XX BF 10451; XX P0 A C G T 01 72 1 286 642 k 02 0 0 999 0 G 03 50 0 0 949 T 04 0 999 0 0 C 05 0 0 999 0 G 06 0 0 999 0 G 07 0 150 0 849 T 08 84 1 665 250 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_173530:MA1007.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_182268/MA1008.1/JASPAR XX ID PHYPADRAFT_182268:MA1008.1:JASPAR XX NA PHYPADRAFT_182268 XX DE PHYPADRAFT_182268 XX OS moss; Physcomitrella patens XX BF 10452; XX P0 A C G T 01 292 180 180 348 w 02 144 79 288 489 k 03 0 0 1000 0 G 04 0 0 0 1000 T 05 0 1000 0 0 C 06 0 0 1000 0 G 07 0 0 1000 0 G 08 0 76 0 924 T 09 70 70 789 70 G 10 292 246 291 171 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_182268:MA1008.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_64121/MA1010.1/JASPAR XX ID PHYPADRAFT_64121:MA1010.1:JASPAR XX NA PHYPADRAFT_64121 XX DE PHYPADRAFT_64121 XX OS moss; Physcomitrella patens XX BF 10453; XX P0 A C G T 01 264 273 180 283 h 02 41 41 41 877 T 03 20 20 853 107 G 04 107 20 125 748 T 05 20 941 20 20 C 06 0 87 912 0 G 07 87 0 912 0 G 08 0 0 0 1000 T 09 608 70 158 164 a 10 288 209 209 294 w 11 309 230 230 230 a 12 309 230 230 230 a 13 309 230 230 230 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_64121:MA1010.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_72483/MA1011.1/JASPAR XX ID PHYPADRAFT_72483:MA1011.1:JASPAR XX NA PHYPADRAFT_72483 XX DE PHYPADRAFT_72483 XX OS moss; Physcomitrella patens XX BF 10631; XX P0 A C G T 01 264 238 308 190 r 02 210 181 272 337 k 03 69 849 17 64 C 04 806 0 106 87 A 05 55 800 0 146 C 06 146 0 800 55 G 07 87 106 0 806 T 08 64 17 849 69 G 09 337 272 181 210 m 10 190 308 238 264 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_72483:MA1011.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL27/MA1012.1/JASPAR XX ID AGL27:MA1012.1:JASPAR XX NA AGL27 XX DE AGL27 XX OS Arabidopsis thaliana XX BF 17503; XX P0 A C G T 01 25 78 25 14 c 02 1 4 0 137 T 03 0 0 0 142 T 04 14 0 1 127 T 05 0 142 0 0 C 06 0 55 0 87 y 07 108 0 1 33 A 08 32 2 0 108 T 09 9 0 0 133 T 10 2 0 0 140 T 11 15 21 2 104 T 12 17 15 42 68 k 13 33 0 109 0 G 14 11 2 92 37 k XX BS 55425; BS 55426; BS 55427; BS 55428; BS 55429; BS 55430; BS 55431; BS 55432; BS 55433; BS 55434; BS 55435; BS 55436; BS 55437; BS 55438; BS 55439; BS 55440; BS 55441; BS 55442; BS 55443; BS 55444; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL27:MA1012.1:JASPAR XX CC ChIP-seq XX RN [1]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [2]; RX PUBMED: 24067612 RL Posé D, Verhage L, Ott F, Yant L, Mathieu J, Angenent GC, Immink RG, Schmid M. Temperature-dependent regulation of flowering by antagonistic FLM variants. Nature 503:414-7 (2013). RN [3]; RX PUBMED: 25361952 RL Heyndrickx KS, Van de Velde J, Wang C, Weigel D, Vandepoele K. A functional and evolutionary perspective on transcription factor binding in Arabidopsis thaliana. Plant Cell 26:3894-910 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA10/MA1013.1/JASPAR XX ID GATA10:MA1013.1:JASPAR XX NA GATA10 XX DE GATA10 XX OS Arabidopsis thaliana XX BF 11093; XX P0 A C G T 01 100 67 133 699 T 02 841 27 132 0 A 03 0 0 999 0 G 04 999 0 0 0 A 05 0 0 0 999 T 06 0 999 0 0 C 07 0 111 84 805 T 08 111 111 740 37 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA10:MA1013.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA11/MA1014.1/JASPAR XX ID GATA11:MA1014.1:JASPAR XX NA GATA11 XX DE GATA11 XX OS Arabidopsis thaliana XX BF 11094; XX P0 A C G T 01 167 42 167 624 t 02 902 0 97 0 A 03 0 0 999 0 G 04 999 0 0 0 A 05 0 0 0 999 T 06 0 999 0 0 C 07 0 0 0 999 T 08 44 131 695 131 G XX BS 55445; BS 55446; BS 55447; BS 55448; BS 55449; BS 55450; BS 55451; BS 55452; BS 55453; BS 55454; BS 55455; BS 55456; BS 55457; BS 55458; BS 55459; BS 55460; BS 55461; BS 55462; BS 55463; BS 55464; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA11:MA1014.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA15/MA1016.1/JASPAR XX ID GATA15:MA1016.1:JASPAR XX NA GATA15 XX DE GATA15 XX OS Arabidopsis thaliana XX BF 11096; XX P0 A C G T 01 206 281 217 296 y 02 308 200 284 208 r 03 182 288 66 465 y 04 40 38 903 19 G 05 980 0 0 19 A 06 3 1 0 996 T 07 55 663 156 126 c 08 324 201 268 207 r 09 269 239 280 212 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA15:MA1016.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA8/MA1017.1/JASPAR XX ID GATA8:MA1017.1:JASPAR XX NA GATA8 XX DE GATA8 XX OS Arabidopsis thaliana XX BF 11099; XX P0 A C G T 01 207 319 261 214 s 02 476 241 152 131 a 03 59 29 899 13 G 04 991 1 2 6 A 05 2 21 0 977 T 06 27 649 132 192 c 07 60 379 108 453 y 08 384 158 369 89 r 09 314 187 320 179 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA8:MA1017.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA9/MA1018.1/JASPAR XX ID GATA9:MA1018.1:JASPAR XX NA GATA9 XX DE GATA9 XX OS Arabidopsis thaliana XX BF 11101; XX P0 A C G T 01 227 227 227 318 t 02 161 516 161 161 c 03 204 291 51 453 y 04 925 0 74 0 A 05 0 0 1000 0 G 06 1000 0 0 0 A 07 0 0 0 1000 T 08 0 1000 0 0 C 09 23 97 23 858 T 10 294 89 452 165 r 11 296 199 199 305 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA9:MA1018.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP20-like/MA1019.1/JASPAR XX ID TCP20-like:MA1019.1:JASPAR XX NA TCP20-like XX DE TCP20-like XX OS Glycine max XX BF 11764; XX P0 A C G T 01 104 199 480 218 g 02 19 14 908 59 G 03 86 19 861 33 G 04 109 307 440 144 s 05 42 882 27 49 C 06 3 996 1 0 C 07 4 976 0 20 C 08 896 17 76 11 A 09 17 844 50 89 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP20-like:MA1019.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT-1/MA1020.1/JASPAR XX ID GT-1:MA1020.1:JASPAR XX NA GT-1 XX DE GT-1 XX OS Arabidopsis thaliana XX BF 7513; XX P0 A C G T 01 0 150 649 200 g 02 0 67 0 932 T 03 30 0 0 970 T 04 999 0 0 0 A 05 971 29 0 0 A 06 30 970 0 0 C 07 0 939 0 61 C 08 624 167 125 84 a XX BS 55465; BS 55466; BS 55467; BS 55468; BS 55469; BS 55470; BS 55471; BS 55472; BS 55473; BS 55474; BS 55475; BS 55476; BS 55477; BS 55478; BS 55479; BS 55480; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT-1:MA1020.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10437822 RL Marechal E., Hiratsuka K., Delgado J., Nairn A., Qin J., Chait B. T., Chua N. H. Modulation of GT-1 DNA-binding activity by calcium-dependent phosphorylation. Plant Mol. Biol. 40:373-386 (1999). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_48267/MA1021.1/JASPAR XX ID PHYPADRAFT_48267:MA1021.1:JASPAR XX NA PHYPADRAFT_48267 XX DE PHYPADRAFT_48267 XX OS moss; Physcomitrella patens XX BF 10632; XX P0 A C G T 01 154 461 154 231 c 02 1 998 1 1 C 03 998 1 1 1 A 04 1 998 1 1 C 05 53 1 946 1 G 06 1 1 1 998 T 07 1 1 998 1 G 08 143 642 72 143 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_48267:MA1021.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_38837/MA1022.1/JASPAR XX ID PHYPADRAFT_38837:MA1022.1:JASPAR XX NA PHYPADRAFT_38837 XX DE PHYPADRAFT_38837 XX OS moss; Physcomitrella patens XX BF 11013; XX P0 A C G T 01 251 264 257 228 v 02 343 186 254 217 r 03 463 85 129 323 w 04 828 68 24 81 A 05 855 62 1 82 A 06 644 216 54 86 a 07 61 27 860 52 G 08 150 269 207 374 y 09 259 174 307 259 d 10 283 262 227 227 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_38837:MA1022.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHYPADRAFT_28324/MA1023.1/JASPAR XX ID PHYPADRAFT_28324:MA1023.1:JASPAR XX NA PHYPADRAFT_28324 XX DE PHYPADRAFT_28324 XX OS moss; Physcomitrella patens XX BF 10454; XX P0 A C G T 01 72 72 286 571 k 02 0 0 999 0 G 03 0 0 0 999 T 04 0 999 0 0 C 05 0 0 999 0 G 06 0 0 999 0 G 07 0 217 0 782 T 08 118 1 705 177 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHYPADRAFT_28324:MA1023.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT1/MA1024.1/JASPAR XX ID HAT1:MA1024.1:JASPAR XX NA HAT1 XX DE HAT1 XX OS Arabidopsis thaliana XX BF 11172; XX P0 A C G T 01 149 374 328 149 s 02 69 506 69 356 y 03 1000 0 0 0 A 04 1000 0 0 0 A 05 0 0 0 1000 T 06 0 1000 0 0 C 07 1000 0 0 0 A 08 98 0 0 902 T 09 101 101 286 512 k 10 349 181 289 181 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT1:MA1024.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 8253077 RL Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HBI1/MA1025.1/JASPAR XX ID HBI1:MA1025.1:JASPAR XX NA HBI1 XX DE HBI1 XX OS Arabidopsis thaliana XX BF 10515; XX P0 A C G T 01 229 313 229 229 c 02 229 229 313 229 g 03 132 240 315 313 k 04 24 106 762 108 G 05 0 1000 0 0 C 06 1000 0 0 0 A 07 0 904 0 95 C 08 0 0 1000 0 G 09 21 21 21 936 T 10 21 21 936 21 G 11 202 485 195 118 c 12 226 226 226 322 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HBI1:MA1025.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24550223 RL Fan M, Bai MY, Kim JG, Wang T, Oh E, Chen L, Park CH, Son SH, Kim SK, Mudgett MB, Wang ZY. The bHLH transcription factor HBI1 mediates the trade-off between growth and pathogen-associated molecular pattern-triggered immunity in Arabidopsis. Plant Cell 26:828-41 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB1-like/MA1030.1/JASPAR XX ID MYB1-like:MA1030.1:JASPAR XX NA MYB1-like XX DE MYB1-like XX OS Oryza sativa; Oryza sativa Japonica Group XX BF 12049; XX P0 A C G T 01 416 113 60 411 w 02 535 24 369 72 r 03 416 562 7 15 m 04 26 962 1 11 C 05 41 928 27 4 C 06 10 1 0 989 T 07 832 32 83 54 A 08 373 132 389 106 r 09 266 258 226 250 h 10 241 256 220 283 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB1-like:MA1030.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OJ1581/MA1031.1/JASPAR XX ID OJ1581:MA1031.1:JASPAR XX NA OJ1581 XX DE OJ1581 XX OS Oryza sativa; Oryza sativa Japonica Group XX BF 11760; XX P0 A C G T 01 175 131 414 279 k 02 74 146 335 445 k 03 0 0 929 71 G 04 0 0 1000 0 G 05 127 101 661 112 g 06 112 661 101 127 c 07 0 1000 0 0 C 08 71 929 0 0 C 09 445 335 146 74 m 10 279 414 131 175 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OJ1581:MA1031.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB1G/MA1032.1/JASPAR XX ID DREB1G:MA1032.1:JASPAR XX NA DREB1G XX DE DREB1G XX OS Oryza sativa; Oryza sativa Japonica Group XX BF 10429; XX P0 A C G T 01 314 229 229 229 a 02 119 226 119 535 t 03 180 0 820 0 G 04 0 999 0 0 C 05 0 999 0 0 C 06 0 0 999 0 G 07 884 0 115 0 A 08 0 999 0 0 C 09 845 22 22 111 A 10 131 219 221 430 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB1G:MA1032.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OJ1058/MA1033.1/JASPAR XX ID OJ1058:MA1033.1:JASPAR XX NA OJ1058 XX DE OJ1058 XX OS Oryza sativa; Oryza sativa Japonica Group XX BF 10693; XX P0 A C G T 01 661 332 3 3 m 02 3 990 3 3 C 03 990 3 3 3 A 04 3 990 3 3 C 05 3 3 990 3 G 06 3 3 3 990 T 07 3 3 990 3 G 08 5 5 495 495 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OJ1058:MA1033.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Os05g0497200/MA1034.1/JASPAR XX ID Os05g0497200:MA1034.1:JASPAR XX NA Os05g0497200 XX DE Os05g0497200 XX OS Oryza sativa; Oryza sativa Japonica Group XX BF 10430; XX P0 A C G T 01 3 990 3 3 C 02 3 3 990 3 G 03 3 661 332 3 s 04 3 990 3 3 C 05 3 3 990 3 G 06 3 990 3 3 C 07 3 990 3 3 C 08 495 5 495 5 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Os05g0497200:MA1034.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP4/MA1035.1/JASPAR XX ID TCP4:MA1035.1:JASPAR XX NA TCP4 XX DE TCP4 XX OS Arabidopsis thaliana XX BF 11750; XX P0 A C G T 01 112 1 775 112 G 02 1 1 998 1 G 03 1 1 998 1 G 04 831 167 1 1 A 05 1 998 1 1 C 06 1 998 1 1 C 07 997 1 1 1 A 08 1 996 1 1 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP4:MA1035.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 12000681 RL Kosugi S., Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family.. Plant J. 30:337-348 (2002). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB24/MA1037.1/JASPAR XX ID MYB24:MA1037.1:JASPAR XX NA MYB24 XX DE MYB24 XX OS Arabidopsis thaliana XX BF 11468; XX P0 A C G T 01 293 213 260 235 r 02 369 158 243 231 a 03 287 20 596 97 r 04 25 0 253 722 K 05 50 60 0 889 T 06 542 206 60 192 a 07 53 26 879 42 G 08 51 5 860 84 G 09 39 360 19 582 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB24:MA1037.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB3/MA1038.1/JASPAR XX ID MYB3:MA1038.1:JASPAR XX NA MYB3 XX DE MYB3 XX OS Arabidopsis thaliana XX BF 11449; XX P0 A C G T 01 285 176 279 260 d 02 59 59 823 59 G 03 20 20 771 188 G 04 0 0 0 1000 T 05 929 0 0 71 A 06 0 0 1000 0 G 07 0 0 1000 0 G 08 0 0 0 1000 T 09 650 74 202 74 a 10 273 191 345 191 r 11 311 230 230 230 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB3:MA1038.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB4/MA1039.1/JASPAR XX ID MYB4:MA1039.1:JASPAR XX NA MYB4 XX DE MYB4 XX OS Arabidopsis thaliana XX BF 11461; XX P0 A C G T 01 253 36 674 36 r 02 9 0 766 225 G 03 0 9 0 991 T 04 565 9 35 391 w 05 26 0 974 0 G 06 18 18 777 188 G 07 10 0 0 990 T 08 319 73 536 73 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB4:MA1039.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC083/MA1043.1/JASPAR XX ID NAC083:MA1043.1:JASPAR XX NA NAC083 XX DE NAC083 XX OS Arabidopsis thaliana XX BF 11525; XX P0 A C G T 01 427 124 124 325 w 02 25 327 25 623 y 03 1000 0 0 0 A 04 0 1000 0 0 C 05 0 0 1000 0 G 06 0 598 0 402 y 07 1000 0 0 0 A 08 1000 0 0 0 A 09 126 522 126 226 c 10 225 325 225 225 c XX BS 55488; BS 55489; BS 55490; BS 55491; BS 55492; BS 55493; BS 55494; BS 55495; BS 55496; BS 55497; BS 55498; BS 55499; BS 55500; BS 55501; BS 55502; BS 55503; BS 55504; BS 55505; BS 55506; BS 55507; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC083:MA1043.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC92/MA1044.1/JASPAR XX ID NAC92:MA1044.1:JASPAR XX NA NAC92 XX DE NAC92 XX OS Arabidopsis thaliana XX BF 11526; XX P0 A C G T 01 227 227 227 318 t 02 318 227 227 227 a 03 559 80 282 80 r 04 22 935 22 22 C 05 909 0 0 91 A 06 430 480 0 91 m 07 0 0 1000 0 G 08 224 497 92 186 c 09 247 607 23 123 c 10 932 23 23 23 A 11 274 299 256 170 v 12 314 229 229 229 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC92:MA1044.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC043/MA1045.1/JASPAR XX ID NAC043:MA1045.1:JASPAR XX NA NAC043 XX DE NAC043 XX OS Arabidopsis thaliana XX BF 11521; XX P0 A C G T 01 444 185 185 185 a 02 46 46 46 863 T 03 442 0 83 475 w 04 719 0 280 0 R 05 76 924 0 0 C 06 0 0 1000 0 G 07 0 245 0 755 T 08 1000 0 0 0 A 09 806 65 65 65 A 10 310 205 205 280 w XX BS 55508; BS 55509; BS 55510; BS 55511; BS 55512; BS 55513; BS 55514; BS 55515; BS 55516; BS 55517; BS 55518; BS 55519; BS 55520; BS 55521; BS 55522; BS 55523; BS 55524; BS 55525; BS 55526; BS 55527; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC043:MA1045.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL9/MA1046.1/JASPAR XX ID NTL9:MA1046.1:JASPAR XX NA NTL9 XX DE NTL9 XX OS Arabidopsis thaliana XX BF 4007; XX P0 A C G T 01 10 10 10 971 T 02 5 5 5 985 T 03 985 5 5 5 A 04 985 5 5 5 A 05 5 5 985 5 G 06 5 5 5 985 T 07 985 5 5 5 A 08 985 5 5 5 A 09 10 10 10 971 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL9:MA1046.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA5/MA1047.1/JASPAR XX ID TGA5:MA1047.1:JASPAR XX NA TGA5 XX DE TGA5 XX OS Arabidopsis thaliana XX BF 10645; XX P0 A C G T 01 444 244 289 22 r 02 0 0 0 1000 T 03 0 0 906 94 G 04 984 0 16 0 A 05 0 1000 0 0 C 06 16 0 984 0 G 07 0 98 0 901 T 08 353 294 206 147 m XX BS 55528; BS 55529; BS 55530; BS 55531; BS 55532; BS 55533; BS 55534; BS 55535; BS 55536; BS 55537; BS 55538; BS 55539; BS 55540; BS 55541; BS 55542; BS 55543; BS 55544; BS 55545; BS 55546; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA5:MA1047.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF094/MA1049.1/JASPAR XX ID ERF094:MA1049.1:JASPAR XX NA ERF094 XX DE ERF094 XX OS Arabidopsis thaliana XX BF 4822; XX P0 A C G T 01 346 461 192 0 m 02 0 0 999 0 G 03 0 999 0 0 C 04 122 877 0 0 C 05 25 0 975 0 G 06 0 951 49 0 C 07 0 999 0 0 C 08 241 104 482 173 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF094:MA1049.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OsI/MA1050.1/JASPAR XX ID OsI:MA1050.1:JASPAR XX NA OsI XX DE OsI XX OS Oryza sativa; Oryza sativa Indica Group XX BF 11761; XX P0 A C G T 01 1 1 946 53 G 02 46 0 953 0 G 03 91 91 726 91 G 04 0 863 46 91 C 05 0 999 0 0 C 06 0 999 0 0 C 07 899 50 50 0 A 08 1 855 72 72 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OsI:MA1050.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARALYDRAFT_897773/MA1054.1/JASPAR XX ID ARALYDRAFT_897773:MA1054.1:JASPAR XX NA ARALYDRAFT_897773 XX DE ARALYDRAFT_897773 XX OS Arabidopsis lyrata subsp. lyrata XX BF 11762; XX P0 A C G T 01 92 278 167 463 y 02 27 79 491 402 k 03 36 4 877 83 G 04 17 7 957 19 G 05 40 125 826 9 G 06 756 215 7 22 A 07 2 949 47 2 C 08 1 995 2 1 C 09 862 2 132 4 A 10 20 907 6 67 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARALYDRAFT_897773:MA1054.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL11/MA1056.1/JASPAR XX ID SPL11:MA1056.1:JASPAR XX NA SPL11 XX DE SPL11 XX OS Arabidopsis thaliana XX BF 11680; XX P0 A C G T 01 229 229 229 314 t 02 314 229 229 229 a 03 172 318 172 339 y 04 147 624 63 166 c 05 0 0 1000 0 G 06 0 0 0 1000 T 07 1000 0 0 0 A 08 0 1000 0 0 C 09 21 21 936 21 G 10 21 21 773 185 G 11 572 78 78 271 w 12 188 271 188 353 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL11:MA1056.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL12/MA1057.1/JASPAR XX ID SPL12:MA1057.1:JASPAR XX NA SPL12 XX DE SPL12 XX OS Arabidopsis thaliana XX BF 11683; XX P0 A C G T 01 272 182 211 335 w 02 143 49 761 47 G 03 8 38 12 942 T 04 947 46 5 2 A 05 5 994 0 1 C 06 76 78 744 102 G 07 249 53 538 159 g 08 278 262 151 310 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL12:MA1057.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL4/MA1058.1/JASPAR XX ID SPL4:MA1058.1:JASPAR XX NA SPL4 XX DE SPL4 XX OS Arabidopsis thaliana XX BF 7520; XX P0 A C G T 01 233 327 198 242 c 02 208 54 636 102 g 03 44 83 26 847 T 04 934 51 11 3 A 05 44 893 5 57 C 06 197 106 557 140 g 07 264 104 414 218 r 08 252 252 205 290 h 09 269 258 195 277 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL4:MA1058.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL5/MA1059.1/JASPAR XX ID SPL5:MA1059.1:JASPAR XX NA SPL5 XX DE SPL5 XX OS Arabidopsis thaliana XX BF 11682; XX P0 A C G T 01 185 172 290 354 k 02 234 195 229 342 t 03 142 53 739 66 G 04 22 37 15 927 T 05 926 67 6 0 A 06 10 974 0 15 C 07 84 60 778 79 G 08 178 59 575 188 g 09 250 299 155 296 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL5:MA1059.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPT/MA1061.1/JASPAR XX ID SPT:MA1061.1:JASPAR XX NA SPT XX DE SPT XX OS Arabidopsis thaliana XX BF 10520; XX P0 A C G T 01 202 427 208 163 c 02 47 568 255 129 s 03 0 961 0 39 C 04 885 0 99 16 A 05 9 910 0 80 C 06 88 0 912 0 G 07 0 12 0 988 T 08 84 115 724 76 G 09 221 301 237 242 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPT:MA1061.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP19/MA1063.1/JASPAR XX ID TCP19:MA1063.1:JASPAR XX NA TCP19 XX DE TCP19 XX OS Arabidopsis thaliana XX BF 11752; XX P0 A C G T 01 148 221 181 450 t 02 137 151 506 206 g 03 32 7 846 115 G 04 112 57 778 53 G 05 190 283 409 118 s 06 109 739 22 130 C 07 13 961 1 25 C 08 0 999 0 1 C 09 841 29 128 2 A 10 0 812 106 81 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP19:MA1063.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP2/MA1064.1/JASPAR XX ID TCP2:MA1064.1:JASPAR XX NA TCP2 XX DE TCP2 XX OS Arabidopsis thaliana XX BF 11751; XX P0 A C G T 01 217 168 429 186 g 02 88 194 154 564 t 03 35 0 844 121 G 04 0 0 981 19 G 05 68 78 521 333 k 06 333 521 78 68 m 07 19 981 0 0 C 08 121 844 0 35 C 09 564 154 194 88 a 10 186 429 168 217 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP2:MA1064.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP20/MA1065.1/JASPAR XX ID TCP20:MA1065.1:JASPAR XX NA TCP20 XX DE TCP20 XX OS Arabidopsis thaliana XX BF 3891; XX P0 A C G T 01 46 30 802 121 G 02 111 23 795 71 G 03 91 356 418 134 s 04 55 878 1 66 C 05 2 997 1 0 C 06 7 956 3 34 C 07 825 61 77 38 A 08 25 825 84 67 C 09 300 338 157 205 m 10 286 227 244 244 a XX BS 55593; BS 55594; BS 55595; BS 55596; BS 55597; BS 55598; BS 55599; BS 55600; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP20:MA1065.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP5/MA1067.1/JASPAR XX ID TCP5:MA1067.1:JASPAR XX NA TCP5 XX DE TCP5 XX OS Arabidopsis thaliana XX BF 11753; XX P0 A C G T 01 2 2 993 2 G 02 2 2 995 2 G 03 2 2 995 2 G 04 995 2 2 2 A 05 2 995 2 2 C 06 2 995 2 2 C 07 995 2 2 2 A 08 2 745 2 250 Y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP5:MA1067.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA6/MA1069.1/JASPAR XX ID TGA6:MA1069.1:JASPAR XX NA TGA6 XX DE TGA6 XX OS Arabidopsis thaliana XX BF 17433; XX P0 A C G T 01 210 210 330 251 k 02 428 211 209 152 a 03 0 0 0 1000 T 04 0 0 1000 0 G 05 1000 0 0 0 A 06 0 1000 0 0 C 07 0 0 1000 0 G 08 0 0 0 1000 T 09 277 599 84 40 m 10 665 98 138 98 a XX BS 54750; BS 55621; BS 54758; BS 54756; BS 54755; BS 54744; BS 55622; BS 54753; BS 54751; BS 54741; BS 55623; BS 54739; BS 55624; BS 54743; BS 54740; BS 54742; BS 54754; BS 54752; BS 55625; BS 54757; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA6:MA1069.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA7/MA1070.1/JASPAR XX ID TGA7:MA1070.1:JASPAR XX NA TGA7 XX DE TGA7 XX OS Arabidopsis thaliana XX BF 10637; XX P0 A C G T 01 188 207 342 263 k 02 355 161 484 0 r 03 10 5 5 980 T 04 77 4 867 52 G 05 923 13 1 63 A 06 5 860 20 115 C 07 38 2 808 152 G 08 50 162 46 742 T 09 261 574 97 68 m 10 599 63 120 218 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA7:MA1070.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF5.3/MA1071.1/JASPAR XX ID DOF5.3:MA1071.1:JASPAR XX NA DOF5.3 XX DE DOF5.3 XX OS Arabidopsis thaliana XX BF 11005; XX P0 A C G T 01 247 247 262 244 g 02 327 213 228 233 a 03 396 128 146 331 w 04 842 61 17 81 A 05 850 79 0 70 A 06 611 329 14 47 m 07 66 52 767 116 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF5.3:MA1071.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRB2/MA1073.1/JASPAR XX ID TRB2:MA1073.1:JASPAR XX NA TRB2 XX DE TRB2 XX OS Arabidopsis thaliana XX BF 11471; XX P0 A C G T 01 368 126 69 437 w 02 349 0 611 40 r 03 372 628 0 0 m 04 0 1000 0 0 C 05 0 1000 0 0 C 06 0 6 0 994 T 07 980 0 7 13 A 08 454 74 398 74 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRB2:MA1073.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [3]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC UNE10/MA1074.1/JASPAR XX ID UNE10:MA1074.1:JASPAR XX NA UNE10 XX DE UNE10 XX OS Arabidopsis thaliana XX BF 10517; XX P0 A C G T 01 214 499 72 214 c 02 0 999 0 0 C 03 999 0 0 0 A 04 0 999 0 0 C 05 0 0 999 0 G 06 0 0 0 999 T 07 0 0 999 0 G 08 267 533 67 134 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=UNE10:MA1074.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY15/MA1076.1/JASPAR XX ID WRKY15:MA1076.1:JASPAR XX NA WRKY15 XX DE WRKY15 XX OS Arabidopsis thaliana XX BF 11971; XX P0 A C G T 01 309 197 248 246 a 02 368 96 464 71 r 03 4 8 949 39 G 04 9 3 4 984 T 05 30 965 2 3 C 06 807 104 26 63 A 07 746 35 154 65 A 08 253 525 89 133 m 09 189 238 396 178 g 10 214 292 275 219 s XX BS 55626; BS 55627; BS 55628; BS 55629; BS 55630; BS 55631; BS 55632; BS 55633; BS 55634; BS 55635; BS 55636; BS 55637; BS 55638; BS 55639; BS 55640; BS 55641; BS 55642; BS 55643; BS 55644; BS 55645; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY15:MA1076.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY18/MA1077.1/JASPAR XX ID WRKY18:MA1077.1:JASPAR XX NA WRKY18 XX DE WRKY18 XX OS Arabidopsis thaliana XX BF 7524; XX P0 A C G T 01 290 262 204 244 m 02 258 279 152 312 h 03 392 16 585 8 r 04 1 1 988 11 G 05 0 0 2 997 T 06 1 997 0 2 C 07 985 8 2 5 A 08 964 10 11 16 A 09 186 372 289 153 s 10 212 254 398 135 s XX BS 55646; BS 55647; BS 55648; BS 55649; BS 55650; BS 55651; BS 55652; BS 55653; BS 55654; BS 55655; BS 55656; BS 55657; BS 55658; BS 55659; BS 55660; BS 55661; BS 55662; BS 55626; BS 55663; BS 55664; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY18:MA1077.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY2/MA1078.1/JASPAR XX ID WRKY2:MA1078.1:JASPAR XX NA WRKY2 XX DE WRKY2 XX OS Arabidopsis thaliana XX BF 11833; XX P0 A C G T 01 115 393 246 246 c 02 277 11 713 0 R 03 0 0 1000 0 G 04 0 0 0 1000 T 05 0 1000 0 0 C 06 961 19 19 0 A 07 806 0 163 31 A 08 271 528 72 129 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY2:MA1078.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY21/MA1079.1/JASPAR XX ID WRKY21:MA1079.1:JASPAR XX NA WRKY21 XX DE WRKY21 XX OS Arabidopsis thaliana XX BF 11819; XX P0 A C G T 01 281 223 249 247 a 02 321 195 224 260 w 03 403 87 407 103 r 04 51 0 910 39 G 05 91 4 2 904 T 06 0 999 0 1 C 07 869 66 21 44 A 08 780 10 162 47 A 09 208 607 65 120 c 10 159 209 429 203 g XX BS 55665; BS 55666; BS 55667; BS 55654; BS 55668; BS 55669; BS 55670; BS 55671; BS 55672; BS 55673; BS 55674; BS 55675; BS 55676; BS 55677; BS 55678; BS 55679; BS 55680; BS 55681; BS 55645; BS 55682; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY21:MA1079.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY23/MA1080.1/JASPAR XX ID WRKY23:MA1080.1:JASPAR XX NA WRKY23 XX DE WRKY23 XX OS Arabidopsis thaliana XX BF 11822; XX P0 A C G T 01 698 1 300 1 R 02 1 1 998 1 G 03 1 1 1 998 T 04 1 998 1 1 C 05 998 1 1 1 A 06 998 1 1 1 A 07 167 831 1 1 C 08 143 143 712 1 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY23:MA1080.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY25/MA1081.1/JASPAR XX ID WRKY25:MA1081.1:JASPAR XX NA WRKY25 XX DE WRKY25 XX OS Arabidopsis thaliana XX BF 11818; XX P0 A C G T 01 59 500 118 323 y 02 265 0 734 0 R 03 0 0 999 0 G 04 0 0 0 999 T 05 0 999 0 0 C 06 999 0 0 0 A 07 903 0 58 39 A 08 184 631 79 105 c XX BS 55683; BS 55641; BS 55684; BS 55685; BS 55632; BS 55640; BS 55686; BS 55635; BS 55687; BS 55688; BS 55689; BS 55690; BS 55691; BS 55634; BS 55692; BS 55644; BS 55654; BS 55693; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY25:MA1081.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY30/MA1083.1/JASPAR XX ID WRKY30:MA1083.1:JASPAR XX NA WRKY30 XX DE WRKY30 XX OS Arabidopsis thaliana XX BF 11829; XX P0 A C G T 01 395 132 437 37 r 02 1 6 989 3 G 03 1 2 1 996 T 04 23 976 0 0 C 05 903 55 14 27 A 06 861 20 78 42 A 07 62 783 44 110 C 08 130 227 481 162 g 09 205 327 265 203 s 10 214 221 251 313 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY30:MA1083.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY40/MA1085.1/JASPAR XX ID WRKY40:MA1085.1:JASPAR XX NA WRKY40 XX DE WRKY40 XX OS Arabidopsis thaliana XX BF 11814; XX P0 A C G T 01 246 267 204 283 y 02 378 127 439 55 r 03 1 1 912 86 G 04 32 0 0 967 T 05 23 977 0 1 C 06 672 148 49 130 a 07 591 105 123 182 a 08 247 270 270 213 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY40:MA1085.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY43/MA1086.1/JASPAR XX ID WRKY43:MA1086.1:JASPAR XX NA WRKY43 XX DE WRKY43 XX OS Arabidopsis thaliana XX BF 12057; XX P0 A C G T 01 374 213 169 245 a 02 509 92 342 58 r 03 53 18 877 52 G 04 74 14 4 908 T 05 87 892 11 11 C 06 798 62 61 79 A 07 765 32 131 71 A 08 256 460 108 176 m 09 332 196 310 163 r 10 231 311 218 240 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY43:MA1086.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY48/MA1088.1/JASPAR XX ID WRKY48:MA1088.1:JASPAR XX NA WRKY48 XX DE WRKY48 XX OS Arabidopsis thaliana XX BF 11831; XX P0 A C G T 01 262 237 265 235 r 02 263 231 252 255 d 03 326 154 410 111 r 04 21 0 869 110 G 05 21 0 0 978 T 06 63 930 1 6 C 07 662 145 66 127 a 08 538 76 228 159 a 09 269 386 155 190 m 10 234 232 313 221 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY48:MA1088.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY57/MA1089.1/JASPAR XX ID WRKY57:MA1089.1:JASPAR XX NA WRKY57 XX DE WRKY57 XX OS Arabidopsis thaliana XX BF 11813; XX P0 A C G T 01 398 177 202 223 a 02 408 173 161 258 w 03 499 76 312 114 r 04 38 17 870 75 G 05 30 0 0 969 T 06 52 914 7 27 C 07 879 48 23 50 A 08 817 14 113 56 A 09 260 508 87 145 m 10 199 207 386 207 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY57:MA1089.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY60/MA1090.1/JASPAR XX ID WRKY60:MA1090.1:JASPAR XX NA WRKY60 XX DE WRKY60 XX OS Arabidopsis thaliana XX BF 11817; XX P0 A C G T 01 270 278 269 183 v 02 106 409 106 380 y 03 136 22 820 22 G 04 0 0 1000 0 G 05 0 0 0 1000 T 06 0 1000 0 0 C 07 1000 0 0 0 A 08 1000 0 0 0 A 09 258 608 67 67 m 10 145 246 465 145 g 11 228 228 228 316 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY60:MA1090.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY62/MA1091.1/JASPAR XX ID WRKY62:MA1091.1:JASPAR XX NA WRKY62 XX DE WRKY62 XX OS Arabidopsis thaliana XX BF 11827; XX P0 A C G T 01 126 126 1 748 T 02 308 1 691 1 R 03 1 1 998 1 G 04 1 1 1 998 T 05 1 998 1 1 C 06 998 1 1 1 A 07 998 1 1 1 A 08 273 726 1 1 M XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY62:MA1091.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY63/MA1092.1/JASPAR XX ID WRKY63:MA1092.1:JASPAR XX NA WRKY63 XX DE WRKY63 XX OS Arabidopsis thaliana XX BF 11812; XX P0 A C G T 01 200 371 143 286 y 02 157 0 843 0 G 03 0 0 999 0 G 04 0 0 0 999 T 05 0 999 0 0 C 06 999 0 0 0 A 07 981 0 0 19 A 08 128 513 231 128 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY63:MA1092.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY75/MA1093.1/JASPAR XX ID WRKY75:MA1093.1:JASPAR XX NA WRKY75 XX DE WRKY75 XX OS Arabidopsis thaliana XX BF 11828; XX P0 A C G T 01 302 279 140 279 h 02 500 17 483 0 r 03 0 0 1000 0 G 04 0 0 0 1000 T 05 0 1000 0 0 C 06 1000 0 0 0 A 07 1000 0 0 0 A 08 260 620 0 120 m XX BS 55734; BS 55735; BS 55736; BS 55737; BS 55738; BS 55739; BS 55740; BS 55741; BS 55742; BS 55743; BS 55744; BS 55745; BS 55746; BS 55747; BS 55748; BS 55749; BS 55750; BS 55751; BS 55752; BS 55753; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY75:MA1093.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY8/MA1094.1/JASPAR XX ID WRKY8:MA1094.1:JASPAR XX NA WRKY8 XX DE WRKY8 XX OS Arabidopsis thaliana XX BF 11830; XX P0 A C G T 01 299 203 224 274 w 02 376 124 403 97 r 03 20 1 883 96 G 04 11 0 1 988 T 05 43 948 0 9 C 06 804 92 28 76 A 07 722 32 163 83 A 08 254 467 120 160 m 09 216 218 374 193 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY8:MA1094.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARALYDRAFT_495258/MA1095.1/JASPAR XX ID ARALYDRAFT_495258:MA1095.1:JASPAR XX NA ARALYDRAFT_495258 XX DE ARALYDRAFT_495258 XX OS Arabidopsis lyrata subsp. lyrata XX BF 11757; BF 11755; XX P0 A C G T 01 2 2 993 2 G 02 250 2 745 2 R 03 2 498 498 2 s 04 2 993 2 2 C 05 2 993 2 2 C 06 2 993 2 2 C 07 993 2 2 2 A 08 3 990 3 3 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARALYDRAFT_495258:MA1095.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARALYDRAFT_496250/MA1096.1/JASPAR XX ID ARALYDRAFT_496250:MA1096.1:JASPAR XX NA ARALYDRAFT_496250 XX DE ARALYDRAFT_496250 XX OS Arabidopsis lyrata subsp. lyrata XX BF 11758; XX P0 A C G T 01 3 3 990 3 G 02 2 2 994 2 G 03 2 2 994 2 G 04 994 2 2 2 A 05 2 994 2 2 C 06 2 994 2 2 C 07 994 2 2 2 A 08 3 990 3 3 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARALYDRAFT_496250:MA1096.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARALYDRAFT_493022/MA1097.1/JASPAR XX ID ARALYDRAFT_493022:MA1097.1:JASPAR XX NA ARALYDRAFT_493022 XX DE ARALYDRAFT_493022 XX OS Arabidopsis lyrata subsp. lyrata XX BF 11756; XX P0 A C G T 01 3 3 990 3 G 02 3 3 990 3 G 03 3 332 661 3 s 04 332 661 3 3 m 05 3 990 3 3 C 06 3 990 3 3 C 07 990 3 3 3 A 08 5 985 5 5 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARALYDRAFT_493022:MA1097.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [3]; RX PUBMED: 26531826 RL Mathelier A, Fornes O, Arenillas DJ, Chen CY, Denay G, Lee J, Shi W, Shyr C, Tan G, Worsley-Hunt R, Zhang AW, Parcy F, Lenhard B, Sandelin A, Wasserman WW. JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2015). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AG/AG/Athamap XX ID AG:AG:Athamap XX NA AG XX DE Agamous XX OS Arabidopsis thaliana XX BF 2958; BF 17319; XX P0 A C G T 01 21 20 6 19 h 02 9 3 3 51 T 03 10 0 1 55 T 04 29 8 8 21 w 05 0 66 0 0 C 06 0 65 0 1 C 07 31 3 6 26 w 08 47 2 0 17 W 09 52 0 1 13 A 10 25 0 1 40 w 11 17 15 11 23 w 12 19 8 20 19 d 13 7 0 57 2 G 14 2 0 54 10 G 15 22 17 5 22 h 16 45 4 5 12 A 17 40 6 9 11 a 18 15 10 16 25 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AG:AG:Athamap XX CC sequences selected with recombinant AG from a pool of double-stranded oligonucleotides containing a core of 26 random nucleotides; 5 rounds of selection and amplification; sequences selected with recombinant AG from a pool of double-stranded oligonucleotides containing a core of 66 random nucleotides; 4 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 7901838 RL Huang H., Mizukami Y., Hu Y., Ma H. Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS. Nucleic Acids Res. 21:4769-4776 (1993). RN [2]; RX PUBMED: 8597661 RL Huang H., Tudor M., Su T., Zhang Y., Hu Y., Ma H. DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation.. Plant Cell 8:81-94 (1996). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HMG-1/MA0044.1/JASPAR XX ID HMG-1:MA0044.1:JASPAR XX NA HMG-1 XX DE class: Other Alpha-Helix; family: High Mobility Group XX OS Pisum sativum XX BF 4973; XX P0 A C G T 01 0 5 8 0 s 02 0 0 3 10 T 03 0 4 0 9 Y 04 0 2 10 1 G 05 0 1 0 12 T 06 6 1 3 3 a 07 3 5 0 5 y 08 0 1 2 10 T 09 0 8 1 4 y XX BS 47963; BS 47964; BS 47965; BS 47966; BS 47967; BS 47968; BS 47969; BS 47970; BS 47971; BS 47972; BS 47973; BS 47974; BS 47975; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HMG-1:MA0044.1:JASPAR XX CC sequences selected with recombinant HMG1 from a pool of double-stranded oligonucleotides containing a core of 20 random nucleotides; 3 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 9161031 RL Webster C.I, Packman L.C, Pwee K.H, Gray J.C. High mobility group proteins HMG-1 and HMG-I/Y bind to a positive regulatory region of the pea plastocyanin gene promoter. The Plant journal : for cell and molecular biology 11:703-15 (1997). RN [2]; RX PUBMED: 19906716 RL Portales-Casamar E., Thongjuea S., Kwon A. T., Arenillas D., Zhao X., Valen E., Yusuf D., Lenhard B., Wasserman W. W., Sandelin A. JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles.. Nucleic Acids Res. 38:D105-10 (2010). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PEND/MA0127.1/JASPAR XX ID PEND:MA0127.1:JASPAR XX NA PEND XX DE class: Zipper-Type; family: Leucine Zipper XX OS Pisum sativum XX BF 17440; XX P0 A C G T 01 30 2 8 2 A 02 6 19 7 10 c 03 1 0 2 39 T 04 4 0 4 34 T 05 3 33 2 4 C 06 0 2 2 38 T 07 2 0 1 39 T 08 32 7 2 1 A 09 4 3 0 35 T 10 2 5 14 21 k XX BS 49782; BS 49783; BS 49784; BS 49785; BS 49786; BS 49787; BS 49788; BS 49789; BS 49790; BS 49791; BS 49792; BS 49793; BS 49794; BS 49795; BS 49796; BS 49797; BS 49798; BS 49799; BS 49800; BS 49801; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PEND:MA0127.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 9973626 RL Mertin S., McDowall S. G., Harley V. R. The DNA-binding specificity of SOX9 and other SOX proteins. Nucleic Acids Res. 27:1359-1364 (1999). RN [2]; RX PUBMED: 19906716 RL Portales-Casamar E., Thongjuea S., Kwon A. T., Arenillas D., Zhao X., Valen E., Yusuf D., Lenhard B., Wasserman W. W., Sandelin A. JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles.. Nucleic Acids Res. 38:D105-10 (2010). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA1A/MA0129.1/JASPAR XX ID TGA1A:MA0129.1:JASPAR XX NA TGA1A XX DE class: Zipper-Type; family: Leucine Zipper XX OS Nicotiana tabacum; Nicotiana sp. XX BF 3155; XX P0 A C G T 01 4 4 0 7 h 02 13 0 1 1 A 03 0 14 0 1 C 04 2 0 13 0 G 05 1 0 0 14 T 06 0 15 0 0 C 07 13 0 1 1 A XX BS 49813; BS 49814; BS 49815; BS 49816; BS 49817; BS 49818; BS 49819; BS 49820; BS 49821; BS 49822; BS 49823; BS 49824; BS 49825; BS 49826; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA1A:MA0129.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 10561063 RL Niu X., Renshaw-Gegg L., Miller L., Guiltinan M. J. Bipartite determinants of DNA-binding specificity of plant basic leucine zipper proteins.. Plant Mol. Biol. 41:1-13 (1999). RN [2]; RX PUBMED: 19906716 RL Portales-Casamar E., Thongjuea S., Kwon A. T., Arenillas D., Zhao X., Valen E., Yusuf D., Lenhard B., Wasserman W. W., Sandelin A. JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles.. Nucleic Acids Res. 38:D105-10 (2010). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LUX/UP00552A_1/UniPROBE XX ID LUX:UP00552A_1:UniPROBE XX NA LUX XX DE LUX XX OS Arabidopsis thaliana XX BF 12724; XX P0 A C G T 01 21 17 36 26 k 02 48 21 8 23 a 03 42 4 17 37 w 04 78 4 6 12 A 05 4 2 92 2 G 06 96 1 2 1 A 07 0.06 0.01 0 0.92 T 08 42 4 2 52 w 09 1 82 2 15 C 10 3 8 85 4 G 11 10 39 44 7 s 12 22 7 15 56 t 13 21 14 28 37 k 14 38 16 15 31 w XX BS 36387; BS 36392; BS 36394; BS 36395; BS 36704; BS 36721; BS 36722; BS 36729; BS 36730; BS 36733; BS 36734; BS 36735; BS 36736; BS 37068; BS 37159; BS 37349; BS 37432; BS 37577; BS 37713; BS 37994; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LUX:UP00552A_1:UniPROBE XX RN [1]; RX PUBMED: 21236673 RL Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA. LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock. Curr Biol 21:126-33 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LUX/UP00552A_2/UniPROBE XX ID LUX:UP00552A_2:UniPROBE XX NA LUX XX DE LUX XX OS Arabidopsis thaliana XX BF 12724; XX P0 A C G T 01 17 18 37 28 k 02 48 19 7 26 w 03 43 6 19 32 w 04 79 3 8 10 A 05 4 1 92 3 G 06 96 1 1 2 A 07 4 1 0 95 T 08 47 5 1 47 w 09 2 85 1 12 C 10 3 6 85 6 G 11 12 34 48 6 s 12 22 7 17 54 t 13 30 14 19 37 w 14 43 15 14 28 w XX BS 36387; BS 36392; BS 36394; BS 36395; BS 36704; BS 36721; BS 36722; BS 36729; BS 36730; BS 36733; BS 36734; BS 36735; BS 36736; BS 37068; BS 37159; BS 37349; BS 37432; BS 37577; BS 37713; BS 37994; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LUX:UP00552A_2:UniPROBE XX RN [1]; RX PUBMED: 21236673 RL Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA. LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock. Curr Biol 21:126-33 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LUX/UP00552A_3/UniPROBE XX ID LUX:UP00552A_3:UniPROBE XX NA LUX XX DE LUX XX OS Arabidopsis thaliana XX BF 12724; XX P0 A C G T 01 19 19 35 27 k 02 33 31 11 25 m 03 47 6 21 26 w 04 84 2 6 8 A 05 2 2 95 1 G 06 97 1 1 1 A 07 0.03 0.01 0 0.96 T 08 46 4 1 49 w 09 1 85 2 12 C 10 2 7 88 3 G 11 11 33 51 5 s 12 29 9 15 47 w 13 24 13 21 42 t 14 35 14 14 37 w XX BS 36387; BS 36392; BS 36394; BS 36395; BS 36704; BS 36721; BS 36722; BS 36729; BS 36730; BS 36733; BS 36734; BS 36735; BS 36736; BS 37068; BS 37159; BS 37349; BS 37432; BS 37577; BS 37713; BS 37994; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LUX:UP00552A_3:UniPROBE XX RN [1]; RX PUBMED: 21236673 RL Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA. LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock. Curr Biol 21:126-33 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LUX/UP00552A_4/UniPROBE XX ID LUX:UP00552A_4:UniPROBE XX NA LUX XX DE LUX XX OS Arabidopsis thaliana XX BF 12724; XX P0 A C G T 01 22 24 4 50 t 02 17 27 30 26 b 03 23 30 9 38 y 04 41 15 10 34 w 05 86 3 5 6 A 06 7 1 88 4 G 07 94 2 1 3 A 08 6 1 2 91 T 09 47 13 1 39 w 10 2 71 2 25 Y 11 7 4 43 46 k 12 16 42 35 7 s 13 14 27 11 48 y 14 20 23 31 26 k XX BS 36387; BS 36392; BS 36394; BS 36395; BS 36704; BS 36721; BS 36722; BS 36729; BS 36730; BS 36733; BS 36734; BS 36735; BS 36736; BS 37068; BS 37159; BS 37349; BS 37432; BS 37577; BS 37713; BS 37994; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LUX:UP00552A_4:UniPROBE XX RN [1]; RX PUBMED: 21236673 RL Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA. LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock. Curr Biol 21:126-33 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LUX/UP00552A_5/UniPROBE XX ID LUX:UP00552A_5:UniPROBE XX NA LUX XX DE LUX XX OS Arabidopsis thaliana XX BF 12724; XX P0 A C G T 01 13 23 36 28 k 02 25 28 12 35 h 03 53 16 12 19 a 04 76 3 4 17 A 05 1 1 91 7 G 06 0.96 0.02 0 0.01 A 07 0.07 0 0.01 0.92 T 08 39 14 1 46 w 09 1 71 1 27 Y 10 8 6 63 23 g 11 14 44 34 8 s 12 17 22 8 53 t 13 19 22 31 28 k 14 44 16 22 18 a XX BS 36387; BS 36392; BS 36394; BS 36395; BS 36704; BS 36721; BS 36722; BS 36729; BS 36730; BS 36733; BS 36734; BS 36735; BS 36736; BS 37068; BS 37159; BS 37349; BS 37432; BS 37577; BS 37713; BS 37994; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LUX:UP00552A_5:UniPROBE XX RN [1]; RX PUBMED: 21236673 RL Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA. LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock. Curr Biol 21:126-33 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LUX/UP00552A_6/UniPROBE XX ID LUX:UP00552A_6:UniPROBE XX NA LUX XX DE LUX XX OS Arabidopsis thaliana XX BF 12724; XX P0 A C G T 01 15 19 36 30 k 02 26 24 17 33 w 03 45 21 12 22 a 04 72 3 3 22 A 05 2 1 91 6 G 06 97 1 1 1 A 07 0.04 0 0.01 0.94 T 08 39 13 1 47 w 09 0.01 0.67 0 0.31 y 10 8 7 65 20 g 11 11 43 36 10 s 12 17 23 8 52 t 13 24 20 26 30 k 14 44 20 17 19 a XX BS 36387; BS 36392; BS 36394; BS 36395; BS 36704; BS 36721; BS 36722; BS 36729; BS 36730; BS 36733; BS 36734; BS 36735; BS 36736; BS 37068; BS 37159; BS 37349; BS 37432; BS 37577; BS 37713; BS 37994; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LUX:UP00552A_6:UniPROBE XX RN [1]; RX PUBMED: 21236673 RL Helfer A, Nusinow DA, Chow BY, Gehrke AR, Bulyk ML, Kay SA. LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock. Curr Biol 21:126-33 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1/UP00555A_1/UniPROBE XX ID DDF1:UP00555A_1:UniPROBE XX NA DDF1 XX DE DDF1 XX OS Arabidopsis lyrata XX BF 8873; XX P0 A C G T 01 18 19 31 32 k 02 16 18 38 28 k 03 13 23 37 27 k 04 32 19 29 20 r 05 27 26 33 14 v 06 20 23 20 37 t 07 16 26 37 21 s 08 96 1 2 1 A 09 1 2 1 96 T 10 0 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.22 0 0.78 0 G 15 0 0.86 0 0.14 C 16 33 17 35 15 r 17 35 23 28 14 r 18 18 27 32 23 s 19 19 19 44 18 g 20 30 19 27 24 r 21 22 21 23 34 t 22 25 24 22 29 w XX BS 36424; BS 36476; BS 36594; BS 36751; BS 36820; BS 37028; BS 37029; BS 37225; BS 37284; BS 37285; BS 37376; BS 18593; BS 37526; BS 37692; BS 37693; BS 37783; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1:UP00555A_1:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1/UP00555A_2/UniPROBE XX ID DDF1:UP00555A_2:UniPROBE XX NA DDF1 XX DE DDF1 XX OS Arabidopsis lyrata XX BF 8873; XX P0 A C G T 01 18 17 39 26 k 02 16 11 38 35 k 03 8 38 34 20 s 04 33 21 22 24 a 05 32 27 25 16 v 06 33 14 18 35 w 07 21 17 38 24 g 08 95 1 3 1 A 09 2 2 2 94 T 10 0 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.21 0 0.79 0 G 15 0 0.85 0 0.14 C 16 33 19 35 13 r 17 30 24 32 14 r 18 14 23 35 28 k 19 19 16 50 15 g 20 41 20 19 20 a 21 16 19 28 37 k 22 27 23 14 36 w XX BS 36424; BS 36476; BS 36594; BS 36751; BS 36820; BS 37028; BS 37029; BS 37225; BS 37284; BS 37285; BS 37376; BS 18593; BS 37526; BS 37692; BS 37693; BS 37783; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1:UP00555A_2:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1/UP00555A_3/UniPROBE XX ID DDF1:UP00555A_3:UniPROBE XX NA DDF1 XX DE DDF1 XX OS Arabidopsis lyrata XX BF 8873; XX P0 A C G T 01 17 21 25 37 k 02 15 28 36 21 s 03 19 12 36 33 k 04 29 18 38 15 r 05 22 25 41 12 s 06 10 33 22 35 y 07 11 38 34 17 s 08 97 1 1 1 A 09 1 2 1 96 T 10 0 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.22 0 0.77 0 G 15 0 0.87 0 0.13 C 16 33 14 35 18 r 17 39 22 25 14 r 18 20 31 29 20 s 19 19 21 38 22 g 20 22 16 35 27 k 21 30 23 18 29 w 22 21 22 35 22 g XX BS 36424; BS 36476; BS 36594; BS 36751; BS 36820; BS 37028; BS 37029; BS 37225; BS 37284; BS 37285; BS 37376; BS 18593; BS 37526; BS 37692; BS 37693; BS 37783; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1:UP00555A_3:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1/UP00555A_4/UniPROBE XX ID DDF1:UP00555A_4:UniPROBE XX NA DDF1 XX DE DDF1 XX OS Arabidopsis lyrata XX BF 8873; XX P0 A C G T 01 21 22 30 27 k 02 18 17 40 25 k 03 18 19 34 29 k 04 27 23 36 14 r 05 26 28 32 14 v 06 18 28 21 33 y 07 23 27 33 17 s 08 94 1 4 1 A 09 2 4 2 92 T 10 0.01 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.29 0 0.71 0 R 15 0 0.80 0 0.19 C 16 24 22 41 13 g 17 29 27 26 18 v 18 22 20 28 30 k 19 22 16 42 20 g 20 23 28 28 21 s 21 19 28 25 28 b 22 25 26 21 28 h XX BS 36424; BS 36476; BS 36594; BS 36751; BS 36820; BS 37028; BS 37029; BS 37225; BS 37284; BS 37285; BS 37376; BS 18593; BS 37526; BS 37692; BS 37693; BS 37783; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1:UP00555A_4:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1/UP00555A_5/UniPROBE XX ID DDF1:UP00555A_5:UniPROBE XX NA DDF1 XX DE DDF1 XX OS Arabidopsis lyrata XX BF 8873; XX P0 A C G T 01 25 17 33 25 d 02 20 12 41 27 k 03 15 34 24 27 y 04 29 18 33 20 r 05 28 32 23 17 m 06 28 19 18 35 w 07 27 24 33 16 r 08 93 1 5 1 A 09 2 4 3 91 T 10 0.01 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.25 0 0.75 0 R 15 0 0.78 0 0.21 C 16 25 24 37 14 r 17 30 27 29 14 v 18 20 19 27 34 k 19 20 16 42 22 g 20 30 26 25 19 v 21 17 25 25 33 t 22 19 34 16 31 y XX BS 36424; BS 36476; BS 36594; BS 36751; BS 36820; BS 37028; BS 37029; BS 37225; BS 37284; BS 37285; BS 37376; BS 18593; BS 37526; BS 37692; BS 37693; BS 37783; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1:UP00555A_5:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1/UP00555A_6/UniPROBE XX ID DDF1:UP00555A_6:UniPROBE XX NA DDF1 XX DE DDF1 XX OS Arabidopsis lyrata XX BF 8873; XX P0 A C G T 01 18 28 26 28 b 02 16 24 38 22 g 03 19 10 44 27 k 04 24 28 38 10 s 05 22 24 42 12 g 06 11 38 23 28 y 07 19 32 33 16 s 08 95 0 4 1 A 09 1 3 3 93 T 10 0.01 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.33 0 0.67 0 r 15 0 0.82 0.01 0.17 C 16 23 19 46 12 g 17 28 28 22 22 m 18 25 21 28 26 d 19 23 16 41 20 g 20 18 30 29 23 s 21 19 32 25 24 s 22 31 20 25 24 r XX BS 36424; BS 36476; BS 36594; BS 36751; BS 36820; BS 37028; BS 37029; BS 37225; BS 37284; BS 37285; BS 37376; BS 18593; BS 37526; BS 37692; BS 37693; BS 37783; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1:UP00555A_6:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF2/UP00557A_1/UniPROBE XX ID DDF2:UP00557A_1:UniPROBE XX NA DDF2 XX DE DDF2 XX OS Arabidopsis lyrata XX BF 12107; XX P0 A C G T 01 24 20 29 27 k 02 20 18 36 26 k 03 20 21 28 31 k 04 28 22 31 19 r 05 26 27 32 15 v 06 19 23 20 38 t 07 19 28 37 16 s 08 0.95 0.01 0.04 0 A 09 0.01 0.01 0 0.98 T 10 0 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.33 0 0.67 0 r 15 0 0.82 0 0.18 C 16 27 21 36 16 r 17 38 25 23 14 a 18 22 22 34 22 g 19 20 19 41 20 g 20 29 22 27 22 r 21 24 24 19 33 t 22 28 26 21 25 h XX BS 36476; BS 36594; BS 36751; BS 37028; BS 37029; BS 37134; BS 37225; BS 37284; BS 37285; BS 37376; BS 37440; BS 37526; BS 37693; BS 37783; BS 37846; BS 37897; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF2:UP00557A_1:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF2/UP00557A_2/UniPROBE XX ID DDF2:UP00557A_2:UniPROBE XX NA DDF2 XX DE DDF2 XX OS Arabidopsis lyrata XX BF 12107; XX P0 A C G T 01 24 17 37 22 g 02 19 11 42 28 k 03 15 32 27 26 b 04 26 19 34 21 r 05 29 31 24 16 m 06 32 18 18 32 w 07 27 22 35 16 r 08 0.93 0.01 0.05 0 A 09 1 1 1 97 T 10 0 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0 0 C 13 0 0 0.99 0 G 14 0.30 0 0.70 0 R 15 0 0.82 0 0.18 C 16 25 25 32 18 v 17 33 28 23 16 m 18 20 20 32 28 k 19 21 18 39 22 g 20 39 23 23 15 a 21 18 20 19 43 t 22 23 31 15 31 y XX BS 36476; BS 36594; BS 36751; BS 37028; BS 37029; BS 37134; BS 37225; BS 37284; BS 37285; BS 37376; BS 37440; BS 37526; BS 37693; BS 37783; BS 37846; BS 37897; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF2:UP00557A_2:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF2/UP00557A_3/UniPROBE XX ID DDF2:UP00557A_3:UniPROBE XX NA DDF2 XX DE DDF2 XX OS Arabidopsis lyrata XX BF 12107; XX P0 A C G T 01 23 22 23 32 t 02 21 27 30 22 s 03 25 13 28 34 d 04 31 24 29 16 r 05 22 22 43 13 g 06 10 27 21 42 y 07 13 33 38 16 s 08 0.97 0 0.03 0 A 09 0.01 0.01 0 0.98 T 10 0 0 0.99 0 G 11 0 0 0 0.99 T 12 0 0.99 0.01 0 C 13 0 0 0.99 0 G 14 0.36 0 0.64 0 r 15 0 0.81 0 0.18 C 16 29 18 39 14 r 17 44 20 23 13 a 18 21 25 36 18 s 19 18 21 44 17 g 20 20 20 30 30 k 21 32 26 18 24 m 22 31 21 29 19 r XX BS 36476; BS 36594; BS 36751; BS 37028; BS 37029; BS 37134; BS 37225; BS 37284; BS 37285; BS 37376; BS 37440; BS 37526; BS 37693; BS 37783; BS 37846; BS 37897; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF2:UP00557A_3:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF2/UP00557A_4/UniPROBE XX ID DDF2:UP00557A_4:UniPROBE XX NA DDF2 XX DE DDF2 XX OS Arabidopsis lyrata XX BF 12107; XX P0 A C G T 01 23 16 28 33 k 02 17 18 33 32 k 03 15 20 28 37 k 04 23 18 39 20 g 05 21 30 32 17 s 06 18 27 19 36 y 07 16 34 37 13 s 08 96 1 3 0 A 09 1 1 1 97 T 10 0 0 0.99 0.01 G 11 0 0 0 0.99 T 12 0 0.99 0.01 0 C 13 0 0 0.99 0.01 G 14 0.43 0 0.56 0 r 15 0 0.74 0.01 0.25 Y 16 36 12 39 13 r 17 45 17 23 15 a 18 21 24 30 25 k 19 26 18 38 18 r 20 27 24 23 26 w 21 24 23 19 34 t 22 33 26 21 20 m XX BS 36476; BS 36594; BS 36751; BS 37028; BS 37029; BS 37134; BS 37225; BS 37284; BS 37285; BS 37376; BS 37440; BS 37526; BS 37693; BS 37783; BS 37846; BS 37897; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF2:UP00557A_4:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF2/UP00557A_5/UniPROBE XX ID DDF2:UP00557A_5:UniPROBE XX NA DDF2 XX DE DDF2 XX OS Arabidopsis lyrata XX BF 12107; XX P0 A C G T 01 27 13 34 26 d 02 14 10 31 45 k 03 14 33 23 30 y 04 18 18 39 25 k 05 23 37 22 18 c 06 28 20 19 33 w 07 26 23 37 14 r 08 93 1 6 0 A 09 1 2 1 96 T 10 0 0 0.98 0.01 G 11 0.01 0 0.01 0.98 T 12 0 0.98 0.01 0.01 C 13 0.01 0 0.98 0.01 G 14 0.43 0 0.56 0 r 15 0 0.70 0.01 0.29 Y 16 34 16 37 13 r 17 38 17 25 20 r 18 18 21 27 34 k 19 31 15 38 16 r 20 38 32 13 17 m 21 15 20 24 41 t 22 32 26 13 29 h XX BS 36476; BS 36594; BS 36751; BS 37028; BS 37029; BS 37134; BS 37225; BS 37284; BS 37285; BS 37376; BS 37440; BS 37526; BS 37693; BS 37783; BS 37846; BS 37897; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF2:UP00557A_5:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF2/UP00557A_6/UniPROBE XX ID DDF2:UP00557A_6:UniPROBE XX NA DDF2 XX DE DDF2 XX OS Arabidopsis lyrata XX BF 12107; XX P0 A C G T 01 20 21 23 36 t 02 19 28 33 20 s 03 16 11 30 43 k 04 29 18 38 15 r 05 18 23 44 15 g 06 11 34 18 37 y 07 9 44 35 12 s 08 97 1 1 1 A 09 1 1 1 97 T 10 0 0 0.99 0.01 G 11 0 0 0 0.99 T 12 0 0.99 0.01 0 C 13 0 0 0.99 0 G 14 0.43 0 0.57 0 r 15 0 0.77 0.01 0.22 C 16 37 9 42 12 r 17 51 17 21 11 a 18 23 26 33 18 s 19 22 22 38 18 g 20 17 17 34 32 k 21 37 24 13 26 w 22 31 24 32 13 r XX BS 36476; BS 36594; BS 36751; BS 37028; BS 37029; BS 37134; BS 37225; BS 37284; BS 37285; BS 37376; BS 37440; BS 37526; BS 37693; BS 37783; BS 37846; BS 37897; BS 37901; BS 37986; BS 38081; BS 38097; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF2:UP00557A_6:UniPROBE XX RN [1]; RX PUBMED: 26103993 RL Lehti-Shiu MD, Uygun S, Moghe GD, Panchy N, Fang L, Hufnagel DE, Jasicki HL, Feig M, Shiu SH. Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. Plant Physiol 168:1717-34 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC019/UP00570A_1/UniPROBE XX ID ANAC019:UP00570A_1:UniPROBE XX NA ANAC019 XX DE ANAC019 XX OS Arabidopsis thaliana XX BF 12725; XX P0 A C G T 01 15 6 21 58 t 02 73 3 14 10 A 03 1 87 2 10 C 04 0.98 0 0.01 0.01 A 05 0.01 0.98 0.01 0 C 06 0 0.01 0.98 0.01 G 07 1 33 28 38 b 08 0.63 0.35 0 0.02 m 09 96 2 1 1 A 10 8 79 5 8 C 11 9 41 6 44 y 12 19 19 27 35 k XX BS 36530; BS 36534; BS 36535; BS 36537; BS 36540; BS 36636; BS 36637; BS 36644; BS 17922; BS 37142; BS 37144; BS 18089; BS 37146; BS 37448; BS 37670; BS 37671; BS 19309; BS 19334; BS 37942; BS 38036; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC019:UP00570A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC019/UP00570A_2/UniPROBE XX ID ANAC019:UP00570A_2:UniPROBE XX NA ANAC019 XX DE ANAC019 XX OS Arabidopsis thaliana XX BF 12725; XX P0 A C G T 01 31 31 19 19 m 02 62 5 19 14 a 03 2 77 10 11 C 04 93 3 2 2 A 05 4 91 4 1 C 06 1 1 94 4 G 07 4 45 33 18 s 08 64 33 1 2 m 09 92 1 3 4 A 10 8 66 14 12 c 11 7 20 7 66 t 12 17 7 24 52 t XX BS 36530; BS 36534; BS 36535; BS 36537; BS 36540; BS 36636; BS 36637; BS 36644; BS 17922; BS 37142; BS 37144; BS 18089; BS 37146; BS 37448; BS 37670; BS 37671; BS 19309; BS 19334; BS 37942; BS 38036; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC019:UP00570A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC055/UP00571A_1/UniPROBE XX ID ANAC055:UP00571A_1:UniPROBE XX NA ANAC055 XX DE ANAC055 XX OS Arabidopsis thaliana XX BF 12726; XX P0 A C G T 01 25 29 32 14 v 02 24 29 16 31 y 03 58 9 21 12 a 04 2 85 6 7 C 05 95 1 2 2 A 06 2 95 2 1 C 07 1 1 95 3 G 08 12 3 63 22 g 09 42 50 3 5 m 10 88 1 4 7 A 11 20 67 5 8 c 12 12 31 9 48 y 13 46 5 28 21 r XX BS 36372; BS 36530; BS 36534; BS 36535; BS 36537; BS 36614; BS 36634; BS 17295; BS 17647; BS 17922; BS 37142; BS 37144; BS 18089; BS 37146; BS 37669; BS 37670; BS 19334; BS 37942; BS 37990; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC055:UP00571A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC055/UP00571A_2/UniPROBE XX ID ANAC055:UP00571A_2:UniPROBE XX NA ANAC055 XX DE ANAC055 XX OS Arabidopsis thaliana XX BF 12726; XX P0 A C G T 01 12 41 36 11 s 02 9 12 32 47 k 03 47 2 13 38 w 04 1 71 1 27 Y 05 97 0 1 2 A 06 0.02 0.95 0 0.03 C 07 1 1 97 1 G 08 6 3 81 10 G 09 0.36 0.61 0 0.02 m 10 0.87 0 0.03 0.10 A 11 12 66 10 12 c 12 8 10 8 74 T 13 20 23 21 36 t XX BS 36372; BS 36530; BS 36534; BS 36535; BS 36537; BS 36614; BS 36634; BS 17295; BS 17647; BS 17922; BS 37142; BS 37144; BS 18089; BS 37146; BS 37669; BS 37670; BS 19334; BS 37942; BS 37990; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC055:UP00571A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC092/UP00572A_1/UniPROBE XX ID ANAC092:UP00572A_1:UniPROBE XX NA ANAC092 XX DE ANAC092 XX OS Arabidopsis thaliana XX BF 12727; XX P0 A C G T 01 44 25 18 13 m 02 16 29 8 47 y 03 89 2 4 5 A 04 0 0.93 0.01 0.06 C 05 0.99 0 0 0 A 06 0.02 0.97 0 0 C 07 0 0 0.98 0.02 G 08 1 94 1 4 C 09 89 7 1 3 A 10 0.96 0 0 0.04 A 11 7 62 3 28 y 12 15 63 16 6 c 13 27 15 26 32 d XX BS 36530; BS 36531; BS 36533; BS 36535; BS 36537; BS 36540; BS 36541; BS 36616; BS 36618; BS 36902; BS 37072; BS 37073; BS 37141; BS 37142; BS 18079; BS 37668; BS 37871; BS 37951; BS 38035; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC092:UP00572A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC092/UP00572A_2/UniPROBE XX ID ANAC092:UP00572A_2:UniPROBE XX NA ANAC092 XX DE ANAC092 XX OS Arabidopsis thaliana XX BF 12727; XX P0 A C G T 01 32 26 14 28 h 02 23 20 8 49 t 03 83 1 11 5 A 04 0 0.90 0.02 0.08 C 05 0.99 0.01 0 0 A 06 0.03 0.96 0 0 C 07 0 0 0.98 0.01 G 08 2 96 1 1 C 09 91 4 1 4 A 10 0.96 0 0 0.03 A 11 7 58 12 23 c 12 17 51 16 16 c 13 6 6 52 36 k XX BS 36530; BS 36531; BS 36533; BS 36535; BS 36537; BS 36540; BS 36541; BS 36616; BS 36618; BS 36902; BS 37072; BS 37073; BS 37141; BS 37142; BS 18079; BS 37668; BS 37871; BS 37951; BS 38035; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC092:UP00572A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC092/UP00572A_3/UniPROBE XX ID ANAC092:UP00572A_3:UniPROBE XX NA ANAC092 XX DE ANAC092 XX OS Arabidopsis thaliana XX BF 12727; XX P0 A C G T 01 12 67 14 7 c 02 43 14 14 29 w 03 95 1 3 1 A 04 0 0.95 0 0.04 C 05 0.99 0 0 0 A 06 0.04 0.95 0 0 C 07 0.01 0 0.98 0.01 G 08 0.01 0.98 0 0.01 C 09 93 4 1 2 A 10 0.98 0 0 0.02 A 11 7 78 3 12 C 12 5 88 3 4 C XX BS 36530; BS 36531; BS 36533; BS 36535; BS 36537; BS 36540; BS 36541; BS 36616; BS 36618; BS 36902; BS 37072; BS 37073; BS 37141; BS 37142; BS 18079; BS 37668; BS 37871; BS 37951; BS 38035; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC092:UP00572A_3:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC092/UP00572A_4/UniPROBE XX ID ANAC092:UP00572A_4:UniPROBE XX NA ANAC092 XX DE ANAC092 XX OS Arabidopsis thaliana XX BF 12727; XX P0 A C G T 01 31 22 21 26 w 02 22 19 10 49 t 03 0.82 0 0.14 0.03 A 04 0 0.94 0.01 0.05 C 05 0.99 0 0 0 A 06 0.03 0.97 0 0 C 07 0 0 0.98 0.02 G 08 0.01 0.98 0 0.01 C 09 0.92 0.04 0 0.04 A 10 0.97 0 0 0.03 A 11 4 68 7 21 C 12 13 63 10 14 c 13 8 6 52 34 k XX BS 36530; BS 36531; BS 36533; BS 36535; BS 36537; BS 36540; BS 36541; BS 36616; BS 36618; BS 36902; BS 37072; BS 37073; BS 37141; BS 37142; BS 18079; BS 37668; BS 37871; BS 37951; BS 38035; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC092:UP00572A_4:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATAF1/UP00573A_1/UniPROBE XX ID ATAF1:UP00573A_1:UniPROBE XX NA ATAF1 XX DE ATAF1 XX OS Arabidopsis thaliana XX BF 12728; XX P0 A C G T 01 28 16 53 3 r 02 61 5 22 12 a 03 87 1 7 5 A 04 7 3 87 3 G 05 74 1 1 24 A 06 6 4 87 3 G 07 49 29 4 18 m 08 1 96 2 1 C 09 2 1 95 2 G 10 2 1 2 95 T 11 78 1 19 2 A 12 20 9 5 66 t XX BS 36482; BS 36488; BS 36530; BS 36535; BS 36537; BS 36616; BS 36637; BS 36644; BS 36651; BS 36709; BS 36927; BS 37142; BS 18089; BS 37146; BS 19334; BS 37942; BS 37951; BS 37972; BS 38082; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATAF1:UP00573A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATAF1/UP00573A_2/UniPROBE XX ID ATAF1:UP00573A_2:UniPROBE XX NA ATAF1 XX DE ATAF1 XX OS Arabidopsis thaliana XX BF 12728; XX P0 A C G T 01 46 8 28 18 r 02 0.82 0 0.16 0.02 A 03 0.04 0.01 0.94 0 G 04 0.92 0.01 0 0.07 A 05 2 1 95 2 G 06 59 16 14 11 a 07 0.01 0.99 0 0 C 08 0 0.01 0.99 0.01 G 09 0 0 0.02 0.97 T 10 0.12 0.01 0.87 0 G 11 16 33 2 49 y 12 23 10 26 41 k XX BS 36482; BS 36488; BS 36530; BS 36535; BS 36537; BS 36616; BS 36637; BS 36644; BS 36651; BS 36709; BS 36927; BS 37142; BS 18089; BS 37146; BS 19334; BS 37942; BS 37951; BS 37972; BS 38082; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATAF1:UP00573A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAP/UP00574A_1/UniPROBE XX ID NAP:UP00574A_1:UniPROBE XX NA NAP XX DE NAP XX OS Arabidopsis thaliana XX BF 12729; XX P0 A C G T 01 24 10 54 12 g 02 14 24 13 49 t 03 12 2 5 81 T 04 2 3 9 86 T 05 80 4 15 1 A 06 1 96 1 2 C 07 2 1 96 1 G 08 1 15 4 80 T 09 85 9 3 3 A 10 81 5 2 12 A 11 7 63 5 25 y 12 22 39 18 21 c 13 25 17 11 47 w XX BS 36530; BS 36537; BS 36540; BS 36616; BS 36617; BS 36618; BS 36644; BS 17314; BS 36709; BS 36902; BS 17647; BS 17891; BS 37142; BS 18089; BS 37146; BS 37633; BS 19334; BS 37942; BS 37951; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAP:UP00574A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAP/UP00574A_2/UniPROBE XX ID NAP:UP00574A_2:UniPROBE XX NA NAP XX DE NAP XX OS Arabidopsis thaliana XX BF 12729; XX P0 A C G T 01 39 31 18 12 m 02 37 10 8 45 w 03 60 8 18 14 a 04 2 63 5 30 y 05 94 3 2 1 A 06 0 98 1 1 C 07 3 1 95 1 G 08 4 70 8 18 C 09 95 3 1 1 A 10 91 1 0 8 A 11 6 64 9 21 c 12 7 37 6 50 y 13 5 8 25 62 k XX BS 36530; BS 36537; BS 36540; BS 36616; BS 36617; BS 36618; BS 36644; BS 17314; BS 36709; BS 36902; BS 17647; BS 17891; BS 37142; BS 18089; BS 37146; BS 37633; BS 19334; BS 37942; BS 37951; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAP:UP00574A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NST2/UP00575A_1/UniPROBE XX ID NST2:UP00575A_1:UniPROBE XX NA NST2 XX DE NST2 XX OS Arabidopsis thaliana XX BF 12730; XX P0 A C G T 01 30 23 12 35 w 02 43 23 13 21 a 03 8 2 4 86 T 04 0 5 1 94 T 05 97 1 1 1 A 06 0.04 0.95 0 0.01 C 07 1 1 96 2 G 08 1 80 1 18 C 09 72 3 2 23 A 10 0.98 0 0 0.01 A 11 9 46 6 39 y 12 13 53 18 16 c XX BS 36398; BS 36514; BS 36530; BS 36616; BS 36618; BS 36878; BS 36902; BS 36915; BS 37072; BS 37073; BS 37142; BS 37863; BS 37871; BS 37877; BS 37951; BS 37965; BS 37993; BS 38004; BS 19606; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NST2:UP00575A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NST2/UP00575A_2/UniPROBE XX ID NST2:UP00575A_2:UniPROBE XX NA NST2 XX DE NST2 XX OS Arabidopsis thaliana XX BF 12730; XX P0 A C G T 01 20 33 30 17 s 02 26 12 8 54 w 03 67 9 13 11 a 04 3 75 2 20 C 05 87 7 3 3 A 06 5 87 3 5 C 07 4 3 90 3 G 08 9 76 7 8 C 09 67 18 3 12 a 10 85 4 1 10 A 11 15 28 7 50 y 12 13 51 25 11 c 13 36 13 21 30 w XX BS 36398; BS 36514; BS 36530; BS 36616; BS 36618; BS 36878; BS 36902; BS 36915; BS 37072; BS 37073; BS 37142; BS 37863; BS 37871; BS 37877; BS 37951; BS 37965; BS 37993; BS 38004; BS 19606; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NST2:UP00575A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL6/UP00576A_1/UniPROBE XX ID NTL6:UP00576A_1:UniPROBE XX NA NTL6 XX DE NTL6 XX OS Arabidopsis thaliana XX BF 12731; XX P0 A C G T 01 12 28 37 23 s 02 24 22 14 40 t 03 85 2 5 8 A 04 0 0.90 0.02 0.07 C 05 0.98 0 0.01 0.01 A 06 0.08 0.92 0 0 C 07 0.01 0 0.97 0.01 G 08 1 82 5 12 C 09 84 11 1 4 A 10 94 1 1 4 A 11 14 60 11 15 c 12 7 71 6 16 C XX BS 36530; BS 36531; BS 36534; BS 36535; BS 36537; BS 36540; BS 36541; BS 36616; BS 36617; BS 36618; BS 37072; BS 37073; BS 37142; BS 18089; BS 37146; BS 37668; BS 37871; BS 37951; BS 38035; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL6:UP00576A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL6/UP00576A_2/UniPROBE XX ID NTL6:UP00576A_2:UniPROBE XX NA NTL6 XX DE NTL6 XX OS Arabidopsis thaliana XX BF 12731; XX P0 A C G T 01 22 21 40 17 g 02 10 14 64 12 g 03 7 13 59 21 g 04 5 13 8 74 T 05 87 3 4 6 A 06 89 3 4 4 A 07 4 5 82 9 G 08 7 2 56 35 k 09 78 3 2 17 A 10 83 3 3 11 A 11 25 15 10 50 w 12 30 27 11 32 h 13 11 14 19 56 t XX BS 36530; BS 36531; BS 36534; BS 36535; BS 36537; BS 36540; BS 36541; BS 36616; BS 36617; BS 36618; BS 37072; BS 37073; BS 37142; BS 18089; BS 37146; BS 37668; BS 37871; BS 37951; BS 38035; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL6:UP00576A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL8/UP00577A_1/UniPROBE XX ID NTL8:UP00577A_1:UniPROBE XX NA NTL8 XX DE NTL8 XX OS Arabidopsis thaliana XX BF 12732; XX P0 A C G T 01 17 31 40 12 s 02 0.63 0.02 0.35 0 r 03 1 17 3 79 T 04 0 0 0.05 0.94 T 05 0.99 0 0.01 0 A 06 0.99 0.01 0 0 A 07 0.01 0 0.99 0 G 08 6 11 39 44 k 09 0.97 0 0 0.02 A 10 0.97 0 0 0.02 A 11 19 31 13 37 y 12 6 62 10 22 c XX BS 36442; BS 36886; BS 36907; BS 37050; BS 37063; BS 37347; BS 37348; BS 37464; BS 37465; BS 37466; BS 37664; BS 37864; BS 37865; BS 37939; BS 37943; BS 37969; BS 37970; BS 38105; BS 38106; BS 38107; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL8:UP00577A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL8/UP00577A_2/UniPROBE XX ID NTL8:UP00577A_2:UniPROBE XX NA NTL8 XX DE NTL8 XX OS Arabidopsis thaliana XX BF 12732; XX P0 A C G T 01 50 15 29 6 r 02 16 30 21 33 y 03 8 17 62 13 g 04 65 8 23 4 a 05 53 2 43 2 r 06 7 2 89 2 G 07 9 4 82 5 G 08 79 3 3 15 A 09 91 2 5 2 A 10 80 9 8 3 A 11 6 60 18 16 c 12 10 46 18 26 y 13 6 38 13 43 y XX BS 36442; BS 36886; BS 36907; BS 37050; BS 37063; BS 37347; BS 37348; BS 37464; BS 37465; BS 37466; BS 37664; BS 37864; BS 37865; BS 37939; BS 37943; BS 37969; BS 37970; BS 38105; BS 38106; BS 38107; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL8:UP00577A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SND1/UP00578A_1/UniPROBE XX ID SND1:UP00578A_1:UniPROBE XX NA SND1 XX DE SND1 XX OS Arabidopsis thaliana XX BF 12733; XX P0 A C G T 01 23 15 31 31 k 02 54 10 18 18 a 03 1 4 0 95 T 04 0 0.02 0 0.98 T 05 0.99 0 0 0 A 06 0.03 0.97 0 0 C 07 0 0 0.98 0.02 G 08 0 0.96 0 0.04 C 09 0.81 0.02 0 0.16 A 10 0.99 0 0 0.01 A 11 9 51 6 34 y 12 11 78 7 4 C XX BS 36397; BS 36530; BS 36616; BS 36618; BS 36915; BS 37072; BS 37142; BS 37470; BS 37471; BS 37472; BS 37552; BS 37863; BS 37877; BS 37951; BS 37965; BS 38004; BS 165; BS 38089; BS 19606; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SND1:UP00578A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SND1/UP00578A_2/UniPROBE XX ID SND1:UP00578A_2:UniPROBE XX NA SND1 XX DE SND1 XX OS Arabidopsis thaliana XX BF 12733; XX P0 A C G T 01 14 6 62 18 g 02 10 2 79 9 G 03 0.03 0 0 0.96 T 04 22 1 5 72 T 05 0.11 0 0.88 0.01 G 06 0.03 0.97 0 0 C 07 0 0 0.95 0.05 G 08 0 0 0 0.99 T 09 0.97 0 0.03 0 A 10 85 4 10 1 A 11 11 31 13 45 y 12 17 29 8 46 y XX BS 36397; BS 36530; BS 36616; BS 36618; BS 36915; BS 37072; BS 37142; BS 37470; BS 37471; BS 37472; BS 37552; BS 37863; BS 37877; BS 37951; BS 37965; BS 38004; BS 165; BS 38089; BS 19606; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SND1:UP00578A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND3/UP00579A_1/UniPROBE XX ID VND3:UP00579A_1:UniPROBE XX NA VND3 XX DE VND3 XX OS Arabidopsis thaliana XX BF 12734; XX P0 A C G T 01 38 19 18 25 w 02 28 10 42 20 r 03 0.01 0.90 0 0.09 C 04 0.98 0.01 0 0.01 A 05 0.01 0.98 0 0 C 06 0.01 0 0.98 0.01 G 07 6 1 86 7 G 08 0.39 0.60 0 0 m 09 0.93 0 0.01 0.06 A 10 8 80 3 9 C 11 16 25 12 47 y 12 20 22 23 35 t XX BS 36530; BS 36534; BS 36535; BS 36537; BS 36540; BS 36617; BS 17295; BS 36637; BS 36644; BS 17647; BS 17922; BS 37142; BS 37144; BS 18089; BS 37146; BS 37669; BS 37670; BS 19334; BS 37942; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND3:UP00579A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND3/UP00579A_2/UniPROBE XX ID VND3:UP00579A_2:UniPROBE XX NA VND3 XX DE VND3 XX OS Arabidopsis thaliana XX BF 12734; XX P0 A C G T 01 24 22 44 10 g 02 12 10 24 54 t 03 88 4 5 3 A 04 1 85 4 10 C 05 0.95 0 0.03 0.02 A 06 4 93 1 2 C 07 1 1 97 1 G 08 7 40 35 18 s 09 91 7 1 1 A 10 95 1 1 3 A 11 7 80 9 4 C 12 6 32 6 56 y XX BS 36530; BS 36534; BS 36535; BS 36537; BS 36540; BS 36617; BS 17295; BS 36637; BS 36644; BS 17647; BS 17922; BS 37142; BS 37144; BS 18089; BS 37146; BS 37669; BS 37670; BS 19334; BS 37942; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND3:UP00579A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND7/UP00580A_1/UniPROBE XX ID VND7:UP00580A_1:UniPROBE XX NA VND7 XX DE VND7 XX OS Arabidopsis thaliana XX BF 12735; XX P0 A C G T 01 31 6 20 43 w 02 58 4 24 14 a 03 2 78 4 16 C 04 93 2 2 3 A 05 2 94 2 2 C 06 1 2 93 4 G 07 1 44 21 34 y 08 55 41 1 3 m 09 90 3 3 4 A 10 14 70 9 7 C 11 12 43 11 34 y 12 18 31 25 26 b XX BS 36530; BS 36534; BS 36535; BS 36537; BS 36540; BS 36617; BS 36637; BS 36644; BS 37142; BS 37144; BS 18089; BS 37146; BS 37670; BS 19309; BS 19334; BS 37942; BS 37951; BS 38082; BS 19606; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND7:UP00580A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND7/UP00580A_2/UniPROBE XX ID VND7:UP00580A_2:UniPROBE XX NA VND7 XX DE VND7 XX OS Arabidopsis thaliana XX BF 12735; XX P0 A C G T 01 35 14 42 9 r 02 15 8 39 38 k 03 78 5 10 7 A 04 2 78 8 12 C 05 95 1 1 3 A 06 3 95 1 1 C 07 1 2 96 1 G 08 3 37 41 19 s 09 77 21 0 2 A 10 93 1 1 5 A 11 7 75 9 9 C 12 2 34 5 59 y XX BS 36530; BS 36534; BS 36535; BS 36537; BS 36540; BS 36617; BS 36637; BS 36644; BS 37142; BS 37144; BS 18089; BS 37146; BS 37670; BS 19309; BS 19334; BS 37942; BS 37951; BS 38082; BS 19606; BS 19607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND7:UP00580A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VOZ2/UP00581A_1/UniPROBE XX ID VOZ2:UP00581A_1:UniPROBE XX NA VOZ2 XX DE VOZ2 XX OS Arabidopsis thaliana XX BF 12736; XX P0 A C G T 01 28 16 25 31 d 02 27 32 25 16 v 03 6 3 84 7 G 04 5 3 86 6 G 05 1 3 1 95 T 06 56 3 5 36 w 07 0 1 98 1 G 08 0 0.98 0.02 0 C 09 1 1 97 1 G 10 1 1 0 98 T 11 77 7 14 2 A 12 47 23 6 24 a XX BS 36373; BS 36377; BS 36616; BS 36617; BS 36618; BS 36630; BS 36631; BS 36632; BS 36915; BS 37142; BS 18283; BS 19053; BS 37871; BS 37872; BS 37877; BS 37900; BS 37951; BS 38004; BS 38005; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VOZ2:UP00581A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VOZ2/UP00581A_2/UniPROBE XX ID VOZ2:UP00581A_2:UniPROBE XX NA VOZ2 XX DE VOZ2 XX OS Arabidopsis thaliana XX BF 12736; XX P0 A C G T 01 29 31 11 29 h 02 30 16 27 27 d 03 0.75 0.01 0.24 0 A 04 0 0 0.99 0.01 G 05 0 0 0 0.99 T 06 0.01 0.99 0 0 C 07 0.98 0.01 0 0.01 A 08 0.98 0 0.02 0 A 09 0 98 1 1 C 10 2 1 95 2 G 11 21 39 14 26 y 12 29 27 12 32 h 13 27 23 37 13 r XX BS 36373; BS 36377; BS 36616; BS 36617; BS 36618; BS 36630; BS 36631; BS 36632; BS 36915; BS 37142; BS 18283; BS 19053; BS 37871; BS 37872; BS 37877; BS 37900; BS 37951; BS 38004; BS 38005; BS 19606; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VOZ2:UP00581A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY1/UP00582A_1/UniPROBE XX ID WRKY1:UP00582A_1:UniPROBE XX NA WRKY1 XX DE WRKY1 XX OS Arabidopsis thaliana XX BF 12737; XX P0 A C G T 01 17 30 18 35 y 02 36 12 33 19 r 03 17 28 40 15 s 04 2 86 4 8 C 05 3 1 92 4 G 06 0 0.03 0 0.97 T 07 0 0 0.01 0.99 T 08 0 0 0.99 0.01 G 09 0.99 0 0 0 A 10 0.02 0.98 0 0 C 11 0 0.64 0 0.35 y 12 33 15 22 30 w 13 28 19 34 19 r XX BS 36324; BS 36423; BS 36643; BS 36818; BS 36834; BS 36835; BS 37308; BS 37415; BS 37416; BS 37459; BS 37719; BS 19188; BS 37841; BS 37842; BS 37843; BS 37946; BS 37947; BS 38054; BS 38092; BS 38112; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY1:UP00582A_1:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY1/UP00582A_2/UniPROBE XX ID WRKY1:UP00582A_2:UniPROBE XX NA WRKY1 XX DE WRKY1 XX OS Arabidopsis thaliana XX BF 12737; XX P0 A C G T 01 19 28 17 36 y 02 11 62 15 12 c 03 9 57 14 20 c 04 3 1 92 4 G 05 0 0.03 0 0.96 T 06 0.01 0 0.01 0.99 T 07 0 0 0.99 0.01 G 08 0.99 0 0 0 A 09 0.02 0.98 0 0 C 10 0 0.81 0 0.19 C 11 15 35 33 17 s 12 26 20 38 16 r 13 28 31 17 24 m XX BS 36324; BS 36423; BS 36643; BS 36818; BS 36834; BS 36835; BS 37308; BS 37415; BS 37416; BS 37459; BS 37719; BS 19188; BS 37841; BS 37842; BS 37843; BS 37946; BS 37947; BS 38054; BS 38092; BS 38112; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY1:UP00582A_2:UniPROBE XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB.Ph3/MYB.PH3/1)(Athamap XX ID MYB.Ph3:MYB.PH3:1)(Athamap XX NA MYB.Ph3 XX DE Myb-like protein of Petunia hybrida XX OS Petunia; Petunia x hybrida XX BF 741; XX P0 A C G T 01 22 3 4 11 w 02 21 1 7 12 w 03 27 1 7 6 a 04 40 0 2 3 A 05 33 0 8 4 A 06 33 0 8 5 A 07 0 46 0 0 C 08 3 15 26 2 s 09 0 0 46 0 G 10 0 0 0 46 T 11 0 0 0 46 T 12 46 0 0 0 A 13 1 13 2 7 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB.Ph3:MYB.PH3:1)(Athamap XX CC sequences selected with recombinant MYB.Ph3 from a pool of double-stranded oligonucleotides containing a core of 18 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 7737128 RL Solano R., Nieto C., Avila J., Canas L., Diaz I., Paz-Ares J. Dual DNA binding specificity of a petal epidermis-specific MYB transcription factor (MYB.Ph3) from Petunia hybrida. EMBO J. 14:1773-1784 (1995). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB.Ph3/MYB.PH3/2)(Athamap XX ID MYB.Ph3:MYB.PH3:2)(Athamap XX NA MYB.Ph3 XX DE Myb-like protein of Petunia hybrida XX OS Petunia; Petunia x hybrida XX BF 741; XX P0 A C G T 01 12 1 6 6 a 02 12 2 7 4 r 03 11 2 8 4 r 04 25 0 0 1 A 05 0 0 27 0 G 06 0 0 3 24 T 07 0 0 0 27 T 08 23 0 0 4 A 09 0 0 27 0 G 10 0 0 0 27 T 11 0 0 0 27 T 12 23 0 4 0 A 13 1 5 4 1 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB.Ph3:MYB.PH3:2)(Athamap XX CC sequences selected with recombinant MYB.Ph3 from a pool of double-stranded oligonucleotides containing a core of 18 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 7737128 RL Solano R., Nieto C., Avila J., Canas L., Diaz I., Paz-Ares J. Dual DNA binding specificity of a petal epidermis-specific MYB transcription factor (MYB.Ph3) from Petunia hybrida. EMBO J. 14:1773-1784 (1995). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC P/P/Athamap XX ID P:P:Athamap XX NA P XX DE maize activator P of flavonoid biosynthetic genes XX OS Zea mays; Zea mays subsp. mays XX BF 756; XX P0 A C G T 01 25 3 4 4 A 02 2 28 3 3 C 03 0 31 0 5 C 04 17 0 0 19 w 05 36 0 0 0 A 06 0 36 0 0 C 07 1 34 0 1 C 08 11 13 4 8 m 09 6 8 15 7 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=P:P:Athamap XX CC sequences selected with recombinant P from a pool of double-stranded oligonucleotides containing a core of 26 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RL TRANSFAC_Team. Revisions of TRANSFAC MATRIX entries. TRANSFAC Reports 1:0001 (1998). RN [2]; RX PUBMED: 8313474 RL Grotewold E., Drummond B. J., Bowen B., Peterson T. The myb-homologous P gene controls phlobaphene pigmentation in maize floral organs by directly activating a flavonoid biosynthetic gene subset. Cell 76:543-553 (1994). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL3/MA0001.1/JASPAR XX ID AGL3:MA0001.1:JASPAR XX NA AGL3 XX DE AGL3 XX OS Arabidopsis thaliana XX BF 3866; XX P0 A C G T 01 0 94 1 2 C 02 3 75 0 19 C 03 79 4 3 11 A 04 40 3 4 50 w 05 66 1 1 29 W 06 48 2 0 47 w 07 65 5 5 22 a 08 11 2 3 81 T 09 65 3 28 1 r 10 0 3 88 6 G XX BS 47183; BS 47184; BS 47185; BS 47186; BS 47187; BS 47188; BS 47189; BS 47190; BS 47191; BS 47192; BS 47193; BS 47194; BS 47195; BS 47196; BS 47197; BS 47198; BS 47199; BS 47200; BS 47201; BS 47202; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL3:MA0001.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 7632923 RL Huang H., Tudor M., Weiss C. A., Hu Y., Ma H. The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein. Plant Mol. Biol. 28:549-567 (1995). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AG/MA0005.1/JASPAR XX ID AG:MA0005.1:JASPAR XX NA AG XX DE AG XX OS Arabidopsis thaliana XX BF 17319; XX P0 A C G T 01 0 87 2 1 C 02 2 86 0 2 C 03 38 9 7 36 w 04 61 5 2 22 a 05 73 1 1 15 A 06 31 3 4 52 w 07 23 16 17 34 w 08 20 13 26 31 k 09 22 0 64 4 G 10 1 0 82 7 G 11 27 25 9 29 h XX BS 47263; BS 47264; BS 47265; BS 47266; BS 47267; BS 47268; BS 47269; BS 47270; BS 47271; BS 47272; BS 47273; BS 47274; BS 47275; BS 47276; BS 47277; BS 47278; BS 47279; BS 47280; BS 47281; BS 47282; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AG:MA0005.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 7901838 RL Huang H., Mizukami Y., Hu Y., Ma H. Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS. Nucleic Acids Res. 21:4769-4776 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT5/MA0008.1/JASPAR XX ID HAT5:MA0008.1:JASPAR XX NA HAT5 XX DE HAT5 XX OS Arabidopsis thaliana XX BF 3981; XX P0 A C G T 01 3 13 4 5 c 02 21 1 0 3 A 03 25 0 0 0 A 04 0 0 0 25 T 05 0 5 0 20 T 06 24 0 1 0 A 07 1 0 0 24 T 08 0 0 2 23 T XX BS 47342; BS 47343; BS 47344; BS 47345; BS 47346; BS 47347; BS 47348; BS 47349; BS 47350; BS 47351; BS 47352; BS 47353; BS 47354; BS 47355; BS 47356; BS 47357; BS 47358; BS 47359; BS 47360; BS 47361; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT5:MA0008.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 8253077 RL Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT5/MA0008.2/JASPAR XX ID HAT5:MA0008.2:JASPAR XX NA HAT5 XX DE HAT5 XX OS Arabidopsis thaliana XX BF 3981; XX P0 A C G T 01 1 5 3 10 y 02 4 5 3 10 t 03 3 13 4 3 c 04 22 1 0 1 A 05 25 0 0 0 A 06 0 0 0 25 T 07 0 5 0 20 T 08 25 0 0 0 A 09 0 0 0 25 T 10 0 0 0 25 T 11 3 1 12 0 G 12 2 8 4 1 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT5:MA0008.2:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 8253077 RL Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Dof2/MA0020.1/JASPAR XX ID Dof2:MA0020.1:JASPAR XX NA Dof2 XX DE Dof2 XX OS Zea mays XX BF 4177; XX P0 A C G T 01 21 0 0 0 A 02 21 0 0 0 A 03 21 0 0 0 A 04 0 0 21 0 G 05 3 14 2 2 c 06 7 6 3 5 m XX BS 47561; BS 47562; BS 47563; BS 47564; BS 47565; BS 47566; BS 47567; BS 47568; BS 47569; BS 47570; BS 47571; BS 47572; BS 47573; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Dof2:MA0020.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 10074718 RL Yanagisawa S., Schmidt R. J. Diversity and similarity among recognition sequences of Dof transcription factors.. Plant J. 17:209-214 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Dof3/MA0021.1/JASPAR XX ID Dof3:MA0021.1:JASPAR XX NA Dof3 XX DE Dof3 XX OS Zea mays XX BF 1302; XX P0 A C G T 01 21 0 0 0 A 02 21 0 0 0 A 03 21 0 0 0 A 04 0 0 21 0 G 05 0 10 3 8 y 06 6 6 9 0 v XX BS 47574; BS 47575; BS 47576; BS 47577; BS 47578; BS 47579; BS 47580; BS 47581; BS 47582; BS 47583; BS 47584; BS 47585; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Dof3:MA0021.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 10074718 RL Yanagisawa S., Schmidt R. J. Diversity and similarity among recognition sequences of Dof transcription factors.. Plant J. 17:209-214 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Gam1/MA0034.1/JASPAR XX ID Gam1:MA0034.1:JASPAR XX NA Gam1 XX DE Gam1 XX OS Hordeum vulgare XX BF 2728; XX P0 A C G T 01 4 6 11 4 g 02 10 5 7 3 r 03 3 13 0 9 y 04 23 1 1 0 A 05 25 0 0 0 A 06 1 24 0 0 C 07 3 14 6 2 c 08 6 0 19 0 G 09 10 11 0 4 m 10 5 19 1 0 C XX BS 47733; BS 47734; BS 47735; BS 47736; BS 47737; BS 47738; BS 47739; BS 47740; BS 47741; BS 47742; BS 47743; BS 47744; BS 47745; BS 47746; BS 47747; BS 47748; BS 47749; BS 47750; BS 47751; BS 47752; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Gam1:MA0034.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 10069063 RL Gubler F., Raventos D., Keys M., Watts R., Mundy J., Jacobsen J. V. Target genes and regulatory domains of the GAMYB transcriptional activator in cereal aleurone. Plant J. 17:1-9 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HMG-I/Y/MA0045.1/JASPAR XX ID HMG-I/Y:MA0045.1:JASPAR XX NA HMG-I/Y XX DE HMG-I/Y XX OS Pisum sativum XX BF 17439; XX P0 A C G T 01 3 5 4 2 s 02 7 0 3 4 w 03 9 1 1 3 a 04 3 6 4 1 s 05 11 0 3 0 A 06 11 0 2 1 A 07 11 0 2 1 A 08 3 3 2 6 t 09 4 1 8 1 r 10 3 4 6 1 s 11 8 5 1 0 m 12 8 1 4 1 r 13 9 0 2 3 a 14 9 5 0 0 m 15 11 0 3 0 A 16 2 7 0 5 y XX BS 47976; BS 47977; BS 47978; BS 47979; BS 47980; BS 47981; BS 47982; BS 47983; BS 47984; BS 47985; BS 47986; BS 47987; BS 47988; BS 47989; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HMG-I/Y:MA0045.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 9161031 RL Webster C.I, Packman L.C, Pwee K.H, Gray J.C. High mobility group proteins HMG-1 and HMG-I/Y bind to a positive regulatory region of the pea plastocyanin gene promoter. The Plant journal : for cell and molecular biology 11:703-15 (1997). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MNB1A/MA0053.1/JASPAR XX ID MNB1A:MA0053.1:JASPAR XX NA MNB1A XX DE MNB1A XX OS Zea mays XX BF 483; XX P0 A C G T 01 15 0 0 0 A 02 15 0 0 0 A 03 15 0 0 0 A 04 0 0 15 0 G 05 3 9 0 3 c XX BS 48135; BS 48136; BS 48137; BS 48138; BS 48139; BS 48140; BS 48141; BS 48142; BS 48143; BS 48144; BS 48145; BS 48146; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MNB1A:MA0053.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 10074718 RL Yanagisawa S., Schmidt R. J. Diversity and similarity among recognition sequences of Dof transcription factors.. Plant J. 17:209-214 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC myb.Ph3/MA0054.1/JASPAR XX ID myb.Ph3:MA0054.1:JASPAR XX NA myb.Ph3 XX DE myb.Ph3 XX OS Petunia x hybrida XX BF 741; XX P0 A C G T 01 19 3 2 46 w 02 64 1 2 3 A 03 63 0 2 5 A 04 4 62 3 1 C 05 10 27 16 17 c 06 10 2 53 5 G 07 13 8 0 49 T 08 3 17 1 49 T 09 28 1 0 41 w XX BS 48147; BS 48148; BS 48149; BS 48150; BS 48151; BS 48152; BS 48153; BS 48154; BS 48155; BS 48156; BS 48157; BS 48158; BS 48159; BS 48160; BS 48161; BS 48162; BS 48163; BS 48164; BS 48165; BS 48166; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=myb.Ph3:MA0054.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 7737128 RL Solano R., Nieto C., Avila J., Canas L., Diaz I., Paz-Ares J. Dual DNA binding specificity of a petal epidermis-specific MYB transcription factor (MYB.Ph3) from Petunia hybrida. EMBO J. 14:1773-1784 (1995). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PBF/MA0064.1/JASPAR XX ID PBF:MA0064.1:JASPAR XX NA PBF XX DE PBF XX OS Zea mays XX BF 4000; XX P0 A C G T 01 16 0 0 0 A 02 16 0 0 0 A 03 16 0 0 0 A 04 0 0 16 0 G 05 1 9 1 5 y XX BS 48351; BS 48352; BS 48353; BS 48354; BS 48355; BS 48356; BS 48357; BS 48358; BS 48359; BS 48360; BS 48361; BS 48362; BS 48363; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PBF:MA0064.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 10074718 RL Yanagisawa S., Schmidt R. J. Diversity and similarity among recognition sequences of Dof transcription factors.. Plant J. 17:209-214 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC squamosa/MA0082.1/JASPAR XX ID squamosa:MA0082.1:JASPAR XX NA squamosa XX DE squamosa XX OS Antirrhinum majus XX BF 1421; XX P0 A C G T 01 11 14 1 4 m 02 0 22 0 8 Y 03 24 0 4 2 A 04 16 2 1 11 w 05 23 0 0 7 A 06 17 0 0 13 w 07 24 1 0 5 A 08 8 0 1 21 W 09 14 1 15 0 r 10 1 1 28 0 G 11 14 5 1 10 w 12 25 5 0 0 A 13 21 2 3 4 A 14 7 5 8 10 k XX BS 48750; BS 48751; BS 48752; BS 48753; BS 48754; BS 48755; BS 48756; BS 48757; BS 48758; BS 48759; BS 48760; BS 48761; BS 48762; BS 48763; BS 48764; BS 48765; BS 48766; BS 48767; BS 48768; BS 48769; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=squamosa:MA0082.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 9826749 RL West A.G, Causier B.E, Davies B, Sharrocks A.D. DNA binding and dimerisation determinants of Antirrhinum majus MADS-box transcription factors. Nucleic acids research 26:5277-87 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP910/MA0096.1/JASPAR XX ID bZIP910:MA0096.1:JASPAR XX NA bZIP910 XX DE bZIP910 XX OS Antirrhinum majus XX BF 1339; XX P0 A C G T 01 15 15 5 0 m 02 0 0 0 35 T 03 0 0 35 0 G 04 35 0 0 0 A 05 0 35 0 0 C 06 0 0 35 0 G 07 0 0 0 35 T XX BS 49055; BS 49056; BS 49057; BS 49058; BS 49059; BS 49060; BS 49061; BS 49062; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP910:MA0096.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP911/MA0097.1/JASPAR XX ID bZIP911:MA0097.1:JASPAR XX NA bZIP911 XX DE bZIP911 XX OS Antirrhinum majus XX BF 1340; XX P0 A C G T 01 1 0 31 1 G 02 17 0 16 0 r 03 0 0 0 33 T 04 0 0 33 0 G 05 33 0 0 0 A 06 0 33 0 0 C 07 0 0 33 0 G 08 0 0 0 33 T 09 0 1 32 0 G 10 1 0 22 10 k 11 11 20 1 1 m 12 1 32 0 0 C XX BS 49063; BS 49064; BS 49065; BS 49066; BS 49067; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP911:MA0097.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-5/MA0110.1/JASPAR XX ID ATHB-5:MA0110.1:JASPAR XX NA ATHB-5 XX DE ATHB-5 XX OS Arabidopsis thaliana XX BF 17238; BF 3982; XX P0 A C G T 01 3 19 9 6 c 02 1 29 4 3 C 03 30 6 0 1 A 04 37 0 0 0 A 05 0 0 0 37 T 06 2 5 10 20 k 07 37 0 0 0 A 08 0 0 0 37 T 09 0 0 0 37 T XX BS 49448; BS 49449; BS 49450; BS 49451; BS 49452; BS 49453; BS 49454; BS 49455; BS 49456; BS 49457; BS 49458; BS 49459; BS 49460; BS 49461; BS 49462; BS 49463; BS 49464; BS 49465; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-5:MA0110.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-5/MA0110.2/JASPAR XX ID ATHB-5:MA0110.2:JASPAR XX NA ATHB-5 XX DE ATHB-5 XX OS Arabidopsis thaliana XX BF 3982; XX P0 A C G T 01 0 9 12 9 b 02 4 9 17 4 s 03 2 12 8 14 y 04 2 17 10 7 s 05 0 32 4 3 C 06 32 6 0 1 A 07 39 0 0 0 A 08 0 0 0 39 T 09 2 8 7 22 t 10 39 0 0 0 A 11 0 0 0 39 T 12 0 0 0 39 T 13 0 0 7 1 G XX BS 49466; BS 49467; BS 49468; BS 49469; BS 49470; BS 49471; BS 49472; BS 49473; BS 49474; BS 49475; BS 49476; BS 49477; BS 49478; BS 49479; BS 49480; BS 49481; BS 49482; BS 49483; BS 49484; BS 49485; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-5:MA0110.2:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC id1/MA0120.1/JASPAR XX ID id1:MA0120.1:JASPAR XX NA id1 XX DE id1 XX OS Zea mays XX BF 1702; XX P0 A C G T 01 1 1 2 20 T 02 3 3 4 14 t 03 1 2 9 12 k 04 0 9 3 12 y 05 0 13 4 7 y 06 2 11 4 7 y 07 3 8 2 11 y 08 1 1 1 21 T 09 8 5 1 10 w 10 0 6 7 11 b 11 0 17 0 7 Y 12 2 0 18 4 G XX BS 49662; BS 49663; BS 49664; BS 49665; BS 49666; BS 49667; BS 49668; BS 49669; BS 49670; BS 49671; BS 49672; BS 49673; BS 49674; BS 49675; BS 49676; BS 49677; BS 49678; BS 49679; BS 49680; BS 49681; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=id1:MA0120.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 15020707 RL Kozaki A., Hake S., Colasanti J. The maize ID1 flowering time regulator is a zinc finger protein with novel DNA binding properties.. Nucleic Acids Res. 32:1710-1720 (2004). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR10/MA0121.1/JASPAR XX ID ARR10:MA0121.1:JASPAR XX NA ARR10 XX DE ARR10 XX OS Arabidopsis thaliana XX BF 4026; XX P0 A C G T 01 14 1 0 0 A 02 0 0 15 0 G 03 14 0 1 0 A 04 0 0 0 15 T 05 4 6 0 5 h 06 1 8 0 6 y 07 0 0 9 6 k 08 3 6 4 2 s XX BS 49682; BS 49683; BS 49684; BS 49685; BS 49686; BS 49687; BS 49688; BS 49689; BS 49690; BS 49691; BS 49692; BS 49693; BS 49694; BS 49695; BS 49696; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR10:MA0121.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 12215502 RL Hosoda K., Imamura A., Katoh E., Hatta T., Tachiki M., Yamada H., Mizuno T., Yamazaki T. Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators.. Plant Cell 14:2015-2029 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC abi4/MA0123.1/JASPAR XX ID abi4:MA0123.1:JASPAR XX NA abi4 XX DE abi4 XX OS Zea mays XX BF 2312; XX P0 A C G T 01 0 49 0 0 C 02 12 0 37 0 G 03 0 20 29 0 s 04 0 23 1 25 y 05 1 3 45 0 G 06 0 45 4 0 C 07 5 28 6 10 c 08 3 25 11 10 c 09 3 31 5 10 c 10 4 26 7 12 c XX BS 49717; BS 49718; BS 49719; BS 49720; BS 49721; BS 49722; BS 49723; BS 49724; BS 49725; BS 49726; BS 49727; BS 49728; BS 49729; BS 49730; BS 49731; BS 49732; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=abi4:MA0123.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 12368505 RL Niu X., Helentjaris T., Bate N. J. Maize ABI4 binds coupling element1 in abscisic acid and sugar response genes.. Plant Cell 14:2565-2575 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EmBP-1/MA0128.1/JASPAR XX ID EmBP-1:MA0128.1:JASPAR XX NA EmBP-1 XX DE EmBP-1 XX OS Triticum aestivum XX BF 507; XX P0 A C G T 01 9 0 0 4 W 02 1 7 4 1 s 03 13 0 0 0 A 04 0 12 0 1 C 05 0 0 13 0 G 06 0 0 0 13 T 07 0 1 12 0 G 08 0 1 12 0 G XX BS 49802; BS 49803; BS 49804; BS 49805; BS 49806; BS 49807; BS 49808; BS 49809; BS 49810; BS 49811; BS 49812; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EmBP-1:MA0128.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 10561063 RL Niu X., Renshaw-Gegg L., Miller L., Guiltinan M. J. Bipartite determinants of DNA-binding specificity of plant basic leucine zipper proteins.. Plant Mol. Biol. 41:1-13 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL15/MA0548.2/JASPAR XX ID AGL15:MA0548.2:JASPAR XX NA AGL15 XX DE AGL15 XX OS Arabidopsis thaliana XX BF 3011; XX P0 A C G T 01 133 218 137 111 c 02 48 33 5 513 T 03 16 5 3 575 T 04 84 8 21 486 T 05 0 596 0 3 C 06 0 435 0 164 Y 07 200 80 50 269 w 08 88 85 53 373 t 09 162 0 4 433 W 10 7 8 0 584 T 11 89 45 31 434 T 12 138 42 168 251 k 13 125 1 473 0 G 14 0 0 585 14 G 15 325 50 28 196 w 16 543 13 5 38 A 17 475 7 29 88 A 18 113 175 185 126 s 19 157 77 50 315 w XX BS 54393; BS 54394; BS 54395; BS 54396; BS 54397; BS 54398; BS 54399; BS 54400; BS 54401; BS 54402; BS 54403; BS 54404; BS 54405; BS 54406; BS 54407; BS 54408; BS 54409; BS 54410; BS 54411; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL15:MA0548.2:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BZR1/MA0550.2/JASPAR XX ID BZR1:MA0550.2:JASPAR XX NA BZR1 XX DE BZR1 XX OS Arabidopsis thaliana XX BF 2997; XX P0 A C G T 01 95 260 131 102 c 02 4 519 4 61 C 03 351 34 203 0 r 04 0 575 0 13 C 05 573 1 4 10 A 06 0 588 0 0 C 07 0 0 588 0 G 08 5 0 0 583 T 09 0 0 588 0 G 10 11 277 39 261 y 11 213 47 280 48 r 12 198 148 91 151 h 13 165 169 114 140 m 14 106 152 78 252 y 15 111 171 133 173 y 16 166 144 73 205 w 17 141 158 98 191 y 18 150 131 121 186 w 19 164 152 85 187 h 20 96 136 126 230 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BZR1:MA0550.2:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15681342 RL He J. X., Gendron J. M., Sun Y., Gampala S. S., Gendron N., Sun C. Q., Wang Z. Y. BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responses.. Science 307:1634-1638 (2005). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL14/MA0586.2/JASPAR XX ID SPL14:MA0586.2:JASPAR XX NA SPL14 XX DE SPL14 XX OS Arabidopsis thaliana XX BF 3015; XX P0 A C G T 01 125 7 74 377 t 02 23 534 0 26 C 03 0 583 0 0 C 04 0 0 583 0 G 05 0 0 0 583 T 06 583 0 0 0 A 07 0 581 0 2 C 08 302 87 129 65 a 09 239 105 113 126 a 10 164 104 83 232 w 11 148 86 104 245 w XX BS 54719; BS 54720; BS 54721; BS 54722; BS 54723; BS 54724; BS 54725; BS 54726; BS 54727; BS 54728; BS 54729; BS 54730; BS 54731; BS 54732; BS 54733; BS 54734; BS 54735; BS 54736; BS 54737; BS 54738; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL14:MA0586.2:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 18302343 RL Liang X., Nazarenus T. J., Stone J. M. Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance.. Biochemistry 47:3645-3653 (2008). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAP1/MA0589.1/JASPAR XX ID ZAP1:MA0589.1:JASPAR XX NA ZAP1 XX DE ZAP1 XX OS Arabidopsis thaliana XX BF 17534; XX P0 A C G T 01 0 0 0 50 T 02 0 0 0 50 T 03 0 0 50 0 G 04 50 0 0 0 A 05 0 50 0 0 C 06 1 47 1 1 C 07 2 5 40 3 G 08 32 11 4 3 a 09 2 7 37 4 G 10 2 28 5 14 y 11 8 20 5 13 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAP1:MA0589.1:JASPAR XX CC SELEX XX RN [1]; RX PUBMED: 8972846 RL de Pater S., Greco V., Pham K., Memelink J., Kijne J. Characterization of a zinc-dependent transcriptional activator from Arabidopsis. Nucleic Acids Res. 24:4624-4631 (1996). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL12/MA0932.1/JASPAR XX ID AHL12:MA0932.1:JASPAR XX NA AHL12 XX DE AHL12 XX OS Arabidopsis thaliana XX BF 8859; XX P0 A C G T 01 772 18 146 64 A 02 843 35 24 98 A 03 484 14 5 497 w 04 332 6 3 660 w 05 660 3 6 332 w 06 497 5 14 484 w 07 98 24 35 843 T 08 64 146 18 772 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL12:MA0932.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 22442143 RL Yun J, Kim YS, Jung JH, Seo PJ, Park CM. The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis. J Biol Chem 287:15307-16 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL20/MA0933.1/JASPAR XX ID AHL20:MA0933.1:JASPAR XX NA AHL20 XX DE AHL20 XX OS Arabidopsis thaliana XX BF 8860; XX P0 A C G T 01 774 66 73 88 A 02 753 6 5 235 A 03 120 4 13 862 T 04 250 6 6 738 W 05 774 4 4 218 A 06 843 8 1 148 A 07 648 12 3 337 w 08 54 28 18 900 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL20:MA0933.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 22442143 RL Yun J, Kim YS, Jung JH, Seo PJ, Park CM. The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis. J Biol Chem 287:15307-16 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL25/MA0934.1/JASPAR XX ID AHL25:MA0934.1:JASPAR XX NA AHL25 XX DE AHL25 XX OS Arabidopsis thaliana XX BF 8861; XX P0 A C G T 01 872 26 53 49 A 02 616 4 6 375 w 03 207 4 3 786 T 04 225 3 2 770 T 05 770 2 3 225 A 06 786 3 4 207 A 07 375 6 4 616 w 08 49 53 26 872 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL25:MA0934.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 22442143 RL Yun J, Kim YS, Jung JH, Seo PJ, Park CM. The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis. J Biol Chem 287:15307-16 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC T11I18.17/MA0936.1/JASPAR XX ID T11I18.17:MA0936.1:JASPAR XX NA T11I18.17 XX DE T11I18.17 XX OS Arabidopsis thaliana XX BF 8862; XX P0 A C G T 01 544 217 80 159 a 02 66 630 38 267 y 03 813 120 43 24 A 04 102 858 24 16 C 05 94 49 812 45 G 06 143 565 112 180 c 07 459 402 48 91 m 08 805 40 96 59 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=T11I18.17:MA0936.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC055/MA0937.1/JASPAR XX ID NAC055:MA0937.1:JASPAR XX NA NAC055 XX DE NAC055 XX OS Arabidopsis thaliana XX BF 8863; XX P0 A C G T 01 796 26 44 134 A 02 19 774 18 188 C 03 970 18 4 9 A 04 22 960 6 12 C 05 16 16 948 20 G 06 14 116 134 736 T 07 878 80 4 37 A 08 866 9 4 121 A XX BS 55033; BS 55034; BS 55035; BS 55036; BS 55037; BS 55038; BS 55039; BS 55040; BS 55041; BS 55042; BS 55043; BS 55044; BS 55045; BS 55046; BS 55047; BS 55048; BS 55049; BS 55050; BS 55051; BS 55052; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC055:MA0937.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC058/MA0938.1/JASPAR XX ID NAC058:MA0938.1:JASPAR XX NA NAC058 XX DE NAC058 XX OS Arabidopsis thaliana XX BF 8864; XX P0 A C G T 01 370 124 344 162 r 02 95 674 55 177 c 03 913 34 22 31 A 04 257 694 26 23 M 05 26 38 908 28 G 06 116 693 72 120 C 07 628 245 20 107 a 08 770 88 26 116 A XX BS 55053; BS 55054; BS 55055; BS 55056; BS 55057; BS 55058; BS 55059; BS 55060; BS 55061; BS 55062; BS 55063; BS 55064; BS 55065; BS 55066; BS 55067; BS 55068; BS 55069; BS 55070; BS 55071; BS 55072; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC058:MA0938.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 24914054 RL Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR11/MA0946.1/JASPAR XX ID ARR11:MA0946.1:JASPAR XX NA ARR11 XX DE ARR11 XX OS Arabidopsis thaliana XX BF 8865; XX P0 A C G T 01 625 51 55 269 w 02 927 11 29 32 A 03 5 2 982 11 G 04 989 2 4 4 A 05 7 3 2 987 T 06 732 22 4 242 A 07 3 833 2 162 C 08 14 5 968 13 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR11:MA0946.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 12610214 RL Imamura A, Kiba T, Tajima Y, Yamashino T, Mizuno T. In vivo and in vitro characterization of the ARR11 response regulator implicated in the His-to-Asp phosphorelay signal transduction in Arabidopsis thaliana. Plant Cell Physiol 44:122-31 (2003). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR14/MA0947.1/JASPAR XX ID ARR14:MA0947.1:JASPAR XX NA ARR14 XX DE ARR14 XX OS Arabidopsis thaliana XX BF 8866; XX P0 A C G T 01 945 5 26 24 A 02 2 1 984 13 G 03 991 1 3 5 A 04 2 3 2 993 T 05 506 154 1 339 w 06 1 960 1 38 C 07 10 5 960 26 G 08 83 484 401 32 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR14:MA0947.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-12/MA0950.1/JASPAR XX ID ATHB-12:MA0950.1:JASPAR XX NA ATHB-12 XX DE ATHB-12 XX OS Arabidopsis thaliana XX BF 8867; XX P0 A C G T 01 579 191 107 124 a 02 668 46 53 233 a 03 18 35 6 941 T 04 48 201 633 118 g 05 965 7 15 13 A 06 9 8 17 966 T 07 30 10 19 940 T 08 128 18 766 88 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-12:MA0950.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-51/MA0952.1/JASPAR XX ID ATHB-51:MA0952.1:JASPAR XX NA ATHB-51 XX DE ATHB-51 XX OS Arabidopsis thaliana XX BF 8868; XX P0 A C G T 01 691 253 4 51 M 02 985 5 4 7 A 03 2 8 1 988 T 04 411 6 3 580 w 05 990 2 5 3 A 06 10 2 4 984 T 07 5 18 12 965 T 08 105 18 777 100 G XX BS 55131; BS 55132; BS 55133; BS 55134; BS 55135; BS 55136; BS 55137; BS 55138; BS 55139; BS 55140; BS 55141; BS 55142; BS 55143; BS 55144; BS 55145; BS 55146; BS 55147; BS 55148; BS 55149; BS 55150; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-51:MA0952.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 16554366 RL Saddic LA, Huvermann B, Bezhani S, Su Y, Winter CM, Kwon CS, Collum RP, Wagner D. The LEAFY target LMI1 is a meristem identity regulator and acts together with LEAFY to regulate expression of CAULIFLOWER. Development 133:1673-82 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB7/MA0954.2/JASPAR XX ID ATHB7:MA0954.2:JASPAR XX NA ATHB7 XX DE ATHB7 XX OS Arabidopsis thaliana XX BF 12011; XX P0 A C G T 01 92 58 68 382 t 02 53 389 92 66 c 03 473 62 11 54 A 04 560 3 0 37 A 05 0 1 1 598 T 06 2 2 464 132 G 07 600 0 0 0 A 08 0 0 0 600 T 09 0 0 2 598 T 10 37 3 551 9 G 11 324 46 181 49 r 12 174 57 98 271 w 13 128 91 93 288 t XX BS 55171; BS 55172; BS 55173; BS 55174; BS 55175; BS 55176; BS 55177; BS 55178; BS 55179; BS 55180; BS 55181; BS 55182; BS 55183; BS 55184; BS 55185; BS 55186; BS 55187; BS 55188; BS 55189; BS 55190; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB7:MA0954.2:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BZIP60/MA0967.1/JASPAR XX ID BZIP60:MA0967.1:JASPAR XX NA BZIP60 XX DE BZIP60 XX OS Arabidopsis thaliana XX BF 8909; XX P0 A C G T 01 18 64 24 893 T 02 26 59 840 74 G 03 892 17 43 49 A 04 13 799 13 175 C 05 175 13 799 13 G 06 49 43 17 892 T 07 74 840 59 26 C 08 893 24 64 18 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BZIP60:MA0967.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CCA1/MA0972.1/JASPAR XX ID CCA1:MA0972.1:JASPAR XX NA CCA1 XX DE CCA1 XX OS Arabidopsis thaliana XX BF 2814; XX P0 A C G T 01 934 1 10 54 A 02 960 1 37 2 A 03 985 4 10 1 A 04 35 0 5 960 T 05 992 5 1 2 A 06 1 12 1 986 T 07 5 991 0 4 C 08 21 91 14 874 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CCA1:MA0972.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 19218364 RL Lu S. X., Knowles S. M., Andronis C., Ong M. S., Tobin E. M. CIRCADIAN CLOCK ASSOCIATED1 and LATE ELONGATED HYPOCOTYL Function Synergistically in the Circadian Clock of Arabidopsis.. Plant Physiol. 150:834-843 (2009). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF2.5/MA0977.1/JASPAR XX ID DOF2.5:MA0977.1:JASPAR XX NA DOF2.5 XX DE DOF2.5 XX OS Arabidopsis thaliana XX BF 12119; XX P0 A C G T 01 756 26 182 36 A 02 598 1 12 389 w 03 990 1 4 5 A 04 986 1 8 6 A 05 744 1 254 1 R 06 4 1 977 18 G 07 8 198 65 729 T 08 238 44 557 160 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF2.5:MA0977.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB1E/MA0978.1/JASPAR XX ID DREB1E:MA0978.1:JASPAR XX NA DREB1E XX DE DREB1E XX OS Arabidopsis thaliana XX BF 12107; XX P0 A C G T 01 978 2 15 4 A 02 9 15 3 973 T 03 6 1 991 3 G 04 3 3 2 992 T 05 3 992 1 4 C 06 2 2 992 4 G 07 169 0 828 2 G 08 1 790 1 208 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB1E:MA0978.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 18643985 RL Magome H, Yamaguchi S, Hanada A, Kamiya Y, Oda K. The DDF1 transcriptional activator upregulates expression of a gibberellin-deactivating gene, GA2ox7, under high-salinity stress in Arabidopsis. Plant J 56:613-26 (2008). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF008/MA0979.1/JASPAR XX ID ERF008:MA0979.1:JASPAR XX NA ERF008 XX DE ERF008 XX OS Arabidopsis thaliana XX BF 5573; XX P0 A C G T 01 148 787 24 41 C 02 335 15 634 17 r 03 27 889 58 26 C 04 39 934 19 8 C 05 66 44 865 26 G 06 320 524 56 101 m 07 70 828 68 34 C 08 100 417 329 154 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF008:MA0979.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2-10/MA0980.1/JASPAR XX ID RAP2-10:MA0980.1:JASPAR XX NA RAP2-10 XX DE RAP2-10 XX OS Arabidopsis thaliana XX BF 5593; XX P0 A C G T 01 33 128 757 83 G 02 22 942 14 22 C 03 117 5 872 7 G 04 6 912 78 4 C 05 4 981 9 6 C 06 9 7 952 32 G 07 8 838 85 69 C 08 33 859 16 92 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2-10:MA0980.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF5.7/MA0984.1/JASPAR XX ID DOF5.7:MA0984.1:JASPAR XX NA DOF5.7 XX DE DOF5.7 XX OS Arabidopsis thaliana XX BF 8872; XX P0 A C G T 01 448 86 224 241 a 02 684 12 61 243 A 03 970 4 10 16 A 04 899 3 79 19 A 05 363 42 589 6 r 06 485 61 443 11 r 07 102 191 460 247 g 08 174 215 408 204 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF5.7:MA0984.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB2C/MA0986.1/JASPAR XX ID DREB2C:MA0986.1:JASPAR XX NA DREB2C XX DE DREB2C XX OS Arabidopsis thaliana XX BF 8874; XX P0 A C G T 01 110 757 121 13 C 02 809 3 185 3 A 03 4 985 3 8 C 04 7 986 3 4 C 05 8 3 984 4 G 06 776 158 47 19 A 07 5 977 5 13 C 08 806 50 27 117 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB2C:MA0986.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 23868510 RL Je J, Song C, Hwang JE, Chung WS, Lim CO. DREB2C acts as a transcriptional activator of the thermo tolerance-related phytocystatin 4 (AtCYS4) gene. Transgenic Res 23:109-23 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF105/MA1000.2/JASPAR XX ID ERF105:MA1000.2:JASPAR XX NA ERF105 XX DE ERF105 XX OS Arabidopsis thaliana XX BF 10428; XX P0 A C G T 01 144 57 278 107 g 02 149 181 36 220 h 03 168 44 257 117 r 04 189 37 312 48 r 05 50 307 0 229 y 06 0 0 586 0 G 07 21 0 565 0 G 08 1 569 0 16 C 09 0 0 586 0 G 10 0 1 585 0 G 11 21 544 0 21 C 12 1 0 523 62 G 13 78 109 382 17 g 14 211 204 60 111 m 15 123 27 330 106 g XX BS 55383; BS 55384; BS 55385; BS 55386; BS 55387; BS 55388; BS 55389; BS 55390; BS 55391; BS 55392; BS 55393; BS 55394; BS 55395; BS 55396; BS 55397; BS 55398; BS 55399; BS 55400; BS 55401; BS 55402; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF105:MA1000.2:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF3/MA1009.1/JASPAR XX ID ARF3:MA1009.1:JASPAR XX NA ARF3 XX DE ARF3 XX OS Arabidopsis thaliana XX BF 8875; XX P0 A C G T 01 2 4 77 917 T 02 2 3 991 3 G 03 1 16 2 981 T 04 2 990 1 6 C 05 2 8 980 10 G 06 3 24 964 10 G 07 618 124 212 46 a 08 575 95 191 139 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF3:MA1009.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 24485461 RL Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA12/MA1015.1/JASPAR XX ID GATA12:MA1015.1:JASPAR XX NA GATA12 XX DE GATA12 XX OS Arabidopsis thaliana XX BF 8876; XX P0 A C G T 01 190 282 146 382 y 02 599 112 230 59 a 03 189 67 738 6 G 04 968 2 22 7 A 05 7 22 2 968 T 06 6 738 67 189 C 07 59 230 112 599 t 08 382 146 282 190 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA12:MA1015.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-15/MA1026.1/JASPAR XX ID ATHB-15:MA1026.1:JASPAR XX NA ATHB-15 XX DE ATHB-15 XX OS Arabidopsis thaliana XX BF 12121; XX P0 A C G T 01 93 172 60 675 t 02 722 193 57 28 A 03 926 32 15 26 A 04 46 10 16 928 T 05 274 62 282 381 d 06 928 16 10 46 A 07 26 15 32 926 T 08 28 57 193 722 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-15:MA1026.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB15/MA1026.2/JASPAR XX ID ATHB15:MA1026.2:JASPAR XX NA ATHB15 XX DE ATHB15 XX OS Arabidopsis thaliana XX BF 12121; BF 8880; XX P0 A C G T 01 265 43 158 124 r 02 363 31 84 112 a 03 268 35 60 227 w 04 212 63 131 184 w 05 199 46 329 16 r 06 13 97 0 480 T 07 518 1 68 3 A 08 590 0 0 0 A 09 0 0 0 590 T 10 27 82 462 19 G 11 590 0 0 0 A 12 0 0 0 590 T 13 10 0 218 362 k 14 494 1 87 8 A 15 97 248 63 182 y XX BS 55481; BS 54698; BS 54697; BS 55482; BS 54696; BS 54681; BS 55483; BS 55484; BS 54682; BS 54686; BS 55485; BS 55486; BS 54680; BS 55487; BS 54692; BS 54690; BS 54693; BS 54694; BS 54695; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB15:MA1026.2:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN1/MA1027.1/JASPAR XX ID KAN1:MA1027.1:JASPAR XX NA KAN1 XX DE KAN1 XX OS Arabidopsis thaliana XX BF 8881; XX P0 A C G T 01 433 129 237 200 a 02 259 213 285 242 r 03 618 16 43 323 w 04 128 192 58 623 t 05 898 14 68 20 A 06 54 87 19 840 T 07 36 147 169 648 t 08 63 876 18 44 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN1:MA1027.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 24464295 RL Huang T, Harrar Y, Lin C, Reinhart B, Newell NR, Talavera-Rauh F, Hokin SA, Barton MK, Kerstetter RA. Arabidopsis KANADI1 acts as a transcriptional repressor by interacting with a specific cis-element and regulates auxin biosynthesis, transport, and signaling in opposition to HD-ZIPIII factors. Plant Cell 26:246-62 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN4/MA1028.1/JASPAR XX ID KAN4:MA1028.1:JASPAR XX NA KAN4 XX DE KAN4 XX OS Arabidopsis thaliana XX BF 8882; XX P0 A C G T 01 11 10 965 14 G 02 941 12 26 21 A 03 905 2 2 92 A 04 2 102 3 893 T 05 893 3 102 2 A 06 92 2 2 905 T 07 21 26 12 941 T 08 14 965 10 11 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN4:MA1028.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 20444210 RL Gao P, Li X, Cui D, Wu L, Parkin I, Gruber MY. A new dominant Arabidopsis transparent testa mutant, sk21-D, and modulation of seed flavonoid biosynthesis by KAN4. Plant Biotechnol J 8:979-93 (2010). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB111/MA1036.1/JASPAR XX ID MYB111:MA1036.1:JASPAR XX NA MYB111 XX DE MYB111 XX OS Arabidopsis thaliana XX BF 8884; XX P0 A C G T 01 229 4 757 10 G 02 5 2 636 357 k 03 3 12 4 981 T 04 874 7 10 109 A 05 18 4 976 2 G 06 6 8 858 128 G 07 6 4 5 985 T 08 525 30 390 55 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB111:MA1036.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB46/MA1040.1/JASPAR XX ID MYB46:MA1040.1:JASPAR XX NA MYB46 XX DE MYB46 XX OS Arabidopsis thaliana XX BF 8885; XX P0 A C G T 01 81 3 911 5 G 02 3 2 387 608 k 03 6 7 1 985 T 04 836 30 6 128 A 05 4 4 991 2 G 06 5 3 898 95 G 07 2 33 1 964 T 08 580 24 358 38 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB46:MA1040.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB55/MA1041.1/JASPAR XX ID MYB55:MA1041.1:JASPAR XX NA MYB55 XX DE MYB55 XX OS Arabidopsis thaliana XX BF 12099; XX P0 A C G T 01 980 1 16 3 A 02 48 946 2 4 C 03 2 989 2 6 C 04 227 49 23 701 T 05 979 1 16 4 A 06 267 730 1 2 M 07 2 958 1 39 C 08 118 54 756 72 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB55:MA1041.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB59/MA1042.1/JASPAR XX ID MYB59:MA1042.1:JASPAR XX NA MYB59 XX DE MYB59 XX OS Arabidopsis thaliana XX BF 8888; XX P0 A C G T 01 357 14 548 80 r 02 17 7 114 862 T 03 31 14 6 949 T 04 874 39 17 71 A 05 17 8 956 19 G 06 24 11 948 18 G 07 39 40 5 916 T 08 552 267 23 158 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB59:MA1042.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF018/MA1048.1/JASPAR XX ID ERF018:MA1048.1:JASPAR XX NA ERF018 XX DE ERF018 XX OS Arabidopsis thaliana XX BF 8889; XX P0 A C G T 01 581 1 412 6 r 02 1 993 2 4 C 03 6 990 2 1 C 04 2 2 993 2 G 05 718 8 65 208 A 06 3 991 1 5 C 07 44 943 1 12 C 08 735 10 70 184 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF018:MA1048.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2-3/MA1051.1/JASPAR XX ID RAP2-3:MA1051.1:JASPAR XX NA RAP2-3 XX DE RAP2-3 XX OS Arabidopsis thaliana XX BF 2841; XX P0 A C G T 01 119 232 543 107 g 02 147 761 33 58 C 03 7 6 982 5 G 04 6 746 244 4 C 05 16 977 4 3 C 06 6 3 976 15 G 07 109 780 26 85 C 08 257 664 6 73 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2-3:MA1051.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2-6/MA1052.1/JASPAR XX ID RAP2-6:MA1052.1:JASPAR XX NA RAP2-6 XX DE RAP2-6 XX OS Arabidopsis thaliana XX BF 5568; XX P0 A C G T 01 34 271 681 14 S 02 27 958 7 8 C 03 7 2 989 2 G 04 2 894 104 1 C 05 12 985 2 1 C 06 4 3 990 3 G 07 20 947 14 20 C 08 66 921 2 10 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2-6:MA1052.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF109/MA1053.1/JASPAR XX ID ERF109:MA1053.1:JASPAR XX NA ERF109 XX DE ERF109 XX OS Arabidopsis thaliana XX BF 8891; XX P0 A C G T 01 38 287 661 13 s 02 50 936 8 6 C 03 3 5 989 3 G 04 3 827 168 2 C 05 13 982 2 3 C 06 4 13 978 5 G 07 38 862 13 86 C 08 207 773 2 18 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF109:MA1053.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 25882345 RL Matsuo M, Johnson JM, Hieno A, Tokizawa M, Nomoto M, Tada Y, Godfrey R, Obokata J, Sherameti I, Yamamoto YY, Böhmer FD, Oelmüller R. High REDOX RESPONSIVE TRANSCRIPTION FACTOR1 Levels Result in Accumulation of Reactive Oxygen Species in Arabidopsis thaliana Shoots and Roots. Mol Plant 8:1253-73 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL1/MA1055.1/JASPAR XX ID SPL1:MA1055.1:JASPAR XX NA SPL1 XX DE SPL1 XX OS Arabidopsis thaliana XX BF 8893; XX P0 A C G T 01 31 880 8 81 C 02 10 924 13 53 C 03 14 2 982 2 G 04 2 8 6 984 T 05 984 6 8 2 A 06 2 982 2 14 C 07 53 13 924 10 G 08 81 8 880 31 G XX BS 54733; BS 55547; BS 54738; BS 55548; BS 54720; BS 55549; BS 55550; BS 54737; BS 54728; BS 55551; BS 55552; BS 54730; BS 55553; BS 54732; BS 54734; BS 55554; BS 54721; BS 55555; BS 54736; BS 55556; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL1:MA1055.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL5/MA1059.2/JASPAR XX ID SPL5:MA1059.2:JASPAR XX NA SPL5 XX DE SPL5 XX OS Arabidopsis thaliana XX BF 11682; XX P0 A C G T 01 244 107 109 138 a 02 273 73 123 129 a 03 102 150 89 257 y 04 25 153 36 384 y 05 0 0 598 0 G 06 0 0 0 598 T 07 598 0 0 0 A 08 0 598 0 0 C 09 0 0 598 0 G 10 0 0 598 0 G 11 546 8 1 43 A 12 170 259 19 150 h XX BS 55557; BS 55558; BS 55559; BS 55560; BS 55561; BS 55562; BS 55563; BS 55564; BS 55565; BS 55566; BS 55567; BS 55568; BS 55569; BS 55570; BS 55571; BS 55572; BS 55573; BS 55574; BS 55575; BS 55576; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL5:MA1059.2:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL7/MA1060.1/JASPAR XX ID SPL7:MA1060.1:JASPAR XX NA SPL7 XX DE SPL7 XX OS Arabidopsis thaliana XX BF 12068; XX P0 A C G T 01 51 777 123 49 C 02 42 26 912 20 G 03 43 12 89 856 T 04 885 62 22 31 A 05 39 922 14 25 C 06 65 106 798 31 G 07 286 208 365 142 r 08 118 614 41 227 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL7:MA1060.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP15/MA1062.1/JASPAR XX ID TCP15:MA1062.1:JASPAR XX NA TCP15 XX DE TCP15 XX OS Arabidopsis thaliana XX BF 5383; XX P0 A C G T 01 6 2 978 14 G 02 5 3 989 2 G 03 60 138 771 30 G 04 8 950 6 36 C 05 2 990 1 7 C 06 3 986 2 9 C 07 949 12 36 3 A 08 6 962 20 12 C XX BS 55577; BS 55578; BS 55579; BS 55580; BS 55581; BS 55582; BS 55583; BS 55584; BS 55585; BS 55586; BS 55587; BS 55588; BS 55589; BS 55590; BS 55591; BS 55592; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP15:MA1062.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP23/MA1066.1/JASPAR XX ID TCP23:MA1066.1:JASPAR XX NA TCP23 XX DE TCP23 XX OS Arabidopsis thaliana XX BF 8896; XX P0 A C G T 01 5 3 966 26 G 02 10 5 980 5 G 03 37 88 835 41 G 04 7 971 8 13 C 05 4 984 8 4 C 06 12 980 3 6 C 07 954 10 31 5 A 08 10 959 11 21 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP23:MA1066.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA2/MA1068.1/JASPAR XX ID TGA2:MA1068.1:JASPAR XX NA TGA2 XX DE TGA2 XX OS Arabidopsis thaliana XX BF 3636; XX P0 A C G T 01 961 1 24 13 A 02 1 980 3 16 C 03 24 2 974 1 G 04 6 5 1 988 T 05 27 970 2 1 C 06 989 2 7 3 A 07 2 110 380 508 k 08 78 704 161 58 C XX BS 55601; BS 55602; BS 55603; BS 55604; BS 55605; BS 55606; BS 55607; BS 55608; BS 55609; BS 55610; BS 55611; BS 55612; BS 55613; BS 55614; BS 55615; BS 55616; BS 55617; BS 55618; BS 55619; BS 55620; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA2:MA1068.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 10662863 RL Despres C., DeLong C., Glaze S., Liu E., Fobert P. R. The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors.. Plant Cell 12:279-290 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY12/MA1075.1/JASPAR XX ID WRKY12:MA1075.1:JASPAR XX NA WRKY12 XX DE WRKY12 XX OS Arabidopsis thaliana XX BF 8900; XX P0 A C G T 01 172 707 76 46 C 02 70 33 819 78 G 03 20 62 5 913 T 04 10 15 29 946 T 05 8 6 954 33 G 06 971 6 10 14 A 07 29 949 5 16 C 08 25 722 101 151 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY12:MA1075.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY38/MA1084.1/JASPAR XX ID WRKY38:MA1084.1:JASPAR XX NA WRKY38 XX DE WRKY38 XX OS Arabidopsis thaliana XX BF 8901; XX P0 A C G T 01 152 672 73 104 c 02 69 28 849 55 G 03 26 30 21 923 T 04 8 23 39 930 T 05 9 16 961 14 G 06 955 17 10 18 A 07 16 951 13 20 C 08 15 679 17 289 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY38:MA1084.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY40/MA1085.2/JASPAR XX ID WRKY40:MA1085.2:JASPAR XX NA WRKY40 XX DE WRKY40 XX OS Arabidopsis thaliana XX BF 11814; XX P0 A C G T 01 89 49 34 62 w 02 107 34 38 55 a 03 234 0 0 0 A 04 0 0 234 0 G 05 0 0 0 234 T 06 0 234 0 0 C 07 230 0 0 4 A 08 232 0 0 2 A 09 83 54 46 51 a 10 76 48 50 60 w XX BS 55694; BS 55695; BS 55696; BS 55697; BS 55698; BS 55699; BS 55700; BS 55701; BS 55702; BS 55703; BS 55704; BS 55705; BS 55706; BS 55707; BS 55708; BS 55709; BS 55710; BS 55711; BS 55712; BS 55713; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY40:MA1085.2:JASPAR XX CC ChIP-seq XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY45/MA1087.1/JASPAR XX ID WRKY45:MA1087.1:JASPAR XX NA WRKY45 XX DE WRKY45 XX OS Arabidopsis thaliana XX BF 8902; XX P0 A C G T 01 60 875 25 40 C 02 15 4 892 89 G 03 6 18 2 974 T 04 4 3 11 982 T 05 4 3 985 7 G 06 988 5 2 4 A 07 6 986 3 5 C 08 8 531 11 450 y XX BS 55714; BS 55715; BS 55716; BS 55717; BS 55718; BS 55719; BS 55720; BS 55721; BS 55722; BS 55723; BS 55724; BS 55725; BS 55726; BS 55727; BS 55728; BS 55729; BS 55730; BS 55731; BS 55732; BS 55733; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY45:MA1087.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC JKD/MA1156.1/JASPAR XX ID JKD:MA1156.1:JASPAR XX NA JKD XX DE JKD XX OS Arabidopsis thaliana XX BF 12435; XX P0 A C G T 01 163 108 67 258 w 02 161 99 72 264 w 03 162 101 79 254 w 04 176 63 75 282 w 05 145 70 74 307 t 06 83 30 31 452 T 07 6 24 13 553 T 08 0 5 4 587 T 09 0 10 0 586 T 10 0 0 596 0 G 11 0 0 13 583 T 12 11 564 0 21 C 13 31 62 331 172 k 14 9 20 42 525 T 15 57 99 34 406 T 16 87 0 0 509 T 17 134 27 8 427 T 18 71 228 193 104 s 19 47 135 39 375 t 20 143 55 209 189 k XX BS 56264; BS 56265; BS 56266; BS 56267; BS 56268; BS 56269; BS 56270; BS 56271; BS 56272; BS 56273; BS 56274; BS 56275; BS 56276; BS 56277; BS 56278; BS 56279; BS 56280; BS 56281; BS 56282; BS 56283; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=JKD:MA1156.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NUC/MA1157.1/JASPAR XX ID NUC:MA1157.1:JASPAR XX NA NUC XX DE NUC XX OS Arabidopsis thaliana XX BF 12497; XX P0 A C G T 01 139 103 87 241 t 02 141 104 90 235 t 03 151 109 83 227 w 04 170 77 84 239 w 05 127 76 85 282 t 06 70 47 42 411 T 07 8 33 19 510 T 08 0 5 8 557 T 09 0 8 0 562 T 10 0 0 570 0 G 11 0 0 5 565 T 12 0 570 0 0 C 13 18 51 381 120 g 14 3 19 33 515 T 15 63 89 46 372 t 16 74 0 3 493 T 17 148 41 15 366 w 18 56 183 202 129 s 19 24 148 55 343 y 20 131 54 227 158 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NUC:MA1157.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MGP/MA1158.1/JASPAR XX ID MGP:MA1158.1:JASPAR XX NA MGP XX DE MGP XX OS Arabidopsis thaliana XX BF 12446; XX P0 A C G T 01 187 203 50 154 h 02 363 50 139 42 a 03 143 183 185 83 s 04 402 15 50 127 a 05 512 0 2 80 A 06 421 26 73 74 A 07 552 21 20 1 A 08 153 379 52 10 m 09 0 0 594 0 G 10 593 0 1 0 A 11 0 594 0 0 C 12 578 0 16 0 A 13 587 3 4 0 A 14 566 9 16 3 A 15 484 28 19 63 A 16 319 80 56 139 a 17 285 77 68 164 w 18 269 72 112 141 a 19 257 80 94 163 w 20 263 68 104 159 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MGP:MA1158.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SGR5/MA1159.1/JASPAR XX ID SGR5:MA1159.1:JASPAR XX NA SGR5 XX DE SGR5 XX OS Arabidopsis thaliana XX BF 17260; BF 17732; XX P0 A C G T 01 293 126 40 141 a 02 343 57 160 40 r 03 340 48 116 96 a 04 433 0 44 123 A 05 310 16 27 247 w 06 486 22 92 0 A 07 532 4 22 42 A 08 33 0 566 1 G 09 591 6 0 3 A 10 0 599 1 0 C 11 592 1 7 0 A 12 598 1 0 1 A 13 560 10 11 19 A 14 428 34 21 117 A 15 285 83 43 189 w XX BS 56284; BS 56285; BS 56286; BS 56287; BS 56288; BS 56289; BS 56290; BS 56291; BS 56292; BS 56293; BS 56294; BS 56295; BS 56296; BS 56297; BS 56298; BS 56299; BS 56300; BS 56301; BS 56302; BS 56303; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SGR5:MA1159.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G14580/MA1160.1/JASPAR XX ID AT1G14580:MA1160.1:JASPAR XX NA AT1G14580 XX DE AT1G14580 XX OS Arabidopsis thaliana XX BF 12330; XX P0 A C G T 01 61 36 32 113 w 02 61 32 34 115 w 03 60 43 32 107 t 04 72 27 28 115 w 05 58 23 28 133 t 06 25 15 11 191 T 07 0 6 5 231 T 08 0 2 0 240 T 09 0 6 1 235 T 10 0 1 240 1 G 11 0 2 15 225 T 12 2 237 0 3 C 13 13 21 154 54 g 14 2 9 14 217 T 15 7 32 13 190 T 16 35 0 6 201 T 17 65 5 1 171 W 18 21 89 108 24 s 19 4 66 4 168 Y 20 38 15 117 72 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G14580:MA1160.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TSO1/MA1161.1/JASPAR XX ID TSO1:MA1161.1:JASPAR XX NA TSO1 XX DE TSO1 XX OS Arabidopsis thaliana XX BF 12529; XX P0 A C G T 01 136 15 28 85 w 02 97 9 28 130 w 03 71 11 8 174 w 04 54 6 9 195 T 05 86 38 15 125 w 06 160 26 41 37 a 07 228 0 35 1 A 08 232 1 16 15 A 09 244 0 0 20 A 10 0 8 3 253 T 11 0 0 0 264 T 12 0 69 0 195 Y 13 214 0 45 5 A 14 264 0 0 0 A 15 264 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TSO1:MA1161.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCX2/MA1162.1/JASPAR XX ID TCX2:MA1162.1:JASPAR XX NA TCX2 XX DE TCX2 XX OS Arabidopsis thaliana XX BF 12522; XX P0 A C G T 01 257 49 61 232 w 02 135 23 28 413 T 03 60 41 1 497 T 04 54 173 41 331 y 05 292 132 107 68 a 06 559 6 26 8 A 07 554 14 1 30 A 08 514 0 14 71 A 09 10 1 7 581 T 10 0 0 0 599 T 11 0 318 0 281 y 12 435 1 163 0 R 13 599 0 0 0 A 14 599 0 0 0 A 15 178 93 10 318 w XX BS 56304; BS 56305; BS 56306; BS 56307; BS 56308; BS 56309; BS 56310; BS 56311; BS 56312; BS 56313; BS 56314; BS 56315; BS 56316; BS 56317; BS 56318; BS 56319; BS 56320; BS 56321; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCX2:MA1162.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G45580/MA1163.1/JASPAR XX ID AT5G45580:MA1163.1:JASPAR XX NA AT5G45580 XX DE AT5G45580 XX OS Arabidopsis thaliana XX BF 17254; BF 17761; XX P0 A C G T 01 310 76 110 101 a 02 319 32 106 140 a 03 280 46 128 143 a 04 259 82 256 0 r 05 0 0 597 0 G 06 546 44 0 7 A 07 597 0 0 0 A 08 0 0 0 597 T 09 399 198 0 0 m 10 29 0 0 568 T 11 83 7 12 495 T 12 62 352 23 160 y 13 76 180 97 244 y 14 150 104 148 195 w XX BS 56322; BS 56323; BS 56324; BS 56325; BS 56326; BS 56327; BS 56328; BS 56329; BS 56330; BS 56331; BS 56332; BS 56333; BS 56334; BS 56335; BS 56336; BS 56337; BS 56338; BS 56339; BS 56340; BS 56341; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G45580:MA1163.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G37180/MA1164.1/JASPAR XX ID AT4G37180:MA1164.1:JASPAR XX NA AT4G37180 XX DE AT4G37180 XX OS Arabidopsis thaliana XX BF 12304; XX P0 A C G T 01 212 168 57 163 h 02 264 99 111 126 a 03 304 39 166 91 r 04 489 19 29 63 A 05 597 0 0 3 A 06 0 0 513 87 G 07 600 0 0 0 A 08 2 0 0 598 T 09 14 1 5 580 T 10 0 600 0 0 C 11 79 233 70 218 y XX BS 56342; BS 56343; BS 56344; BS 56345; BS 56346; BS 56347; BS 56348; BS 56349; BS 56350; BS 56351; BS 56352; BS 56353; BS 56354; BS 56355; BS 56356; BS 56357; BS 56358; BS 56359; BS 56360; BS 56361; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G37180:MA1164.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G49560/MA1165.1/JASPAR XX ID AT1G49560:MA1165.1:JASPAR XX NA AT1G49560 XX DE AT1G49560 XX OS Arabidopsis thaliana XX BF 12268; XX P0 A C G T 01 436 35 58 70 A 02 78 88 4 429 T 03 90 375 30 104 c 04 211 141 98 149 a 05 317 78 95 109 a 06 484 15 35 65 A 07 0 0 585 14 G 08 599 0 0 0 A 09 0 0 0 599 T 10 27 16 0 556 T 11 0 599 0 0 C XX BS 56362; BS 56363; BS 56364; BS 56365; BS 56366; BS 56367; BS 56368; BS 56369; BS 56370; BS 56371; BS 56372; BS 56373; BS 56374; BS 56375; BS 56376; BS 56377; BS 56378; BS 56379; BS 56380; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G49560:MA1165.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G12730/MA1166.1/JASPAR XX ID AT3G12730:MA1166.1:JASPAR XX NA AT3G12730 XX DE AT3G12730 XX OS Arabidopsis thaliana XX BF 12351; XX P0 A C G T 01 54 14 23 14 a 02 67 9 12 17 a 03 80 3 17 5 A 04 43 16 44 2 r 05 42 10 53 0 r 06 4 0 101 0 G 07 99 0 1 5 A 08 105 0 0 0 A 09 0 0 1 104 T 10 83 22 0 0 A 11 0 0 0 105 T 12 3 0 0 102 T 13 0 86 0 19 C 14 7 44 14 40 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G12730:MA1166.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G03500/MA1167.1/JASPAR XX ID AT2G03500:MA1167.1:JASPAR XX NA AT2G03500 XX DE AT2G03500 XX OS Arabidopsis thaliana XX BF 12342; XX P0 A C G T 01 316 6 229 49 r 02 0 0 600 0 G 03 544 0 4 52 A 04 600 0 0 0 A 05 0 0 0 600 T 06 490 110 0 0 A 07 1 1 0 598 T 08 95 70 34 401 t 09 28 529 12 31 C 10 138 158 149 155 y 11 206 79 166 149 r XX BS 56381; BS 56382; BS 56383; BS 56384; BS 56385; BS 56386; BS 56387; BS 56388; BS 56389; BS 56390; BS 56391; BS 56392; BS 56393; BS 56394; BS 56395; BS 56396; BS 56397; BS 56398; BS 56399; BS 56400; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G03500:MA1167.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G04030/MA1168.1/JASPAR XX ID AT3G04030:MA1168.1:JASPAR XX NA AT3G04030 XX DE AT3G04030 XX OS Arabidopsis thaliana XX BF 11454; XX P0 A C G T 01 257 84 115 142 a 02 315 33 103 147 a 03 206 62 174 156 d 04 262 97 239 0 r 05 0 0 597 1 G 06 586 10 0 2 A 07 596 0 0 2 A 08 0 0 0 598 T 09 288 310 0 0 m 10 13 0 0 585 T 11 85 20 55 438 T 12 108 241 33 216 y 13 110 131 102 255 t 14 146 96 131 225 t XX BS 56401; BS 56402; BS 56403; BS 56404; BS 56405; BS 56406; BS 56407; BS 56408; BS 56409; BS 56410; BS 56411; BS 56337; BS 56412; BS 56324; BS 56338; BS 56331; BS 56413; BS 56414; BS 56415; BS 56416; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G04030:MA1168.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB105/MA1169.1/JASPAR XX ID MYB105:MA1169.1:JASPAR XX NA MYB105 XX DE MYB105 XX OS Arabidopsis thaliana XX BF 12450; XX P0 A C G T 01 36 0 13 46 w 02 18 21 6 50 t 03 35 29 3 28 h 04 35 7 22 31 w 05 44 5 0 46 w 06 42 3 8 42 w 07 79 0 1 15 A 08 0 95 0 0 C 09 3 85 7 0 C 10 0 0 95 0 G 11 0 0 0 95 T 12 0 0 1 94 T 13 80 2 6 7 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB105:MA1169.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB118/MA1170.1/JASPAR XX ID MYB118:MA1170.1:JASPAR XX NA MYB118 XX DE MYB118 XX OS Arabidopsis thaliana XX BF 12454; XX P0 A C G T 01 135 34 40 69 a 02 129 35 34 80 w 03 117 33 32 96 w 04 107 34 51 86 w 05 51 80 29 118 y 06 164 7 84 23 r 07 146 0 57 75 w 08 78 178 22 0 m 09 6 251 19 2 C 10 0 0 278 0 G 11 0 0 0 278 T 12 1 0 0 277 T 13 278 0 0 0 A 14 2 270 0 6 C 15 145 5 78 50 r 16 123 24 23 108 w 17 138 22 18 100 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB118:MA1170.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB52/MA1171.1/JASPAR XX ID MYB52:MA1171.1:JASPAR XX NA MYB52 XX DE MYB52 XX OS Arabidopsis thaliana XX BF 8886; XX P0 A C G T 01 27 39 12 31 y 02 35 10 29 35 d 03 35 7 17 50 w 04 32 16 15 46 w 05 100 0 0 9 A 06 0 109 0 0 C 07 0 95 14 0 C 08 0 0 109 0 G 09 0 0 0 109 T 10 0 0 0 109 T 11 81 0 10 18 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB52:MA1171.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB3R5/MA1172.1/JASPAR XX ID MYB3R5:MA1172.1:JASPAR XX NA MYB3R5 XX DE MYB3R5 XX OS Arabidopsis thaliana XX BF 12465; XX P0 A C G T 01 258 77 97 134 a 02 306 65 65 130 a 03 339 21 48 158 w 04 312 22 19 213 w 05 203 56 40 267 w 06 199 79 127 161 w 07 41 59 50 416 T 08 196 0 224 146 d 09 389 4 154 19 R 10 20 546 0 0 C 11 0 566 0 0 C 12 0 0 566 0 G 13 0 2 0 564 T 14 4 0 0 562 T 15 238 0 291 37 r XX BS 56417; BS 56418; BS 56419; BS 56420; BS 56421; BS 56422; BS 56423; BS 56424; BS 56425; BS 56426; BS 56427; BS 56428; BS 56429; BS 56430; BS 56431; BS 56432; BS 56433; BS 56434; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB3R5:MA1172.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB101/MA1173.1/JASPAR XX ID MYB101:MA1173.1:JASPAR XX NA MYB101 XX DE MYB101 XX OS Arabidopsis thaliana XX BF 12449; XX P0 A C G T 01 327 82 86 105 a 02 369 53 70 108 a 03 198 249 47 106 m 04 140 261 44 155 y 05 180 120 188 112 r 06 160 51 47 342 w 07 596 2 1 1 A 08 598 0 2 0 A 09 0 600 0 0 C 10 54 424 49 73 C 11 86 4 510 0 G 12 367 43 27 163 w 13 407 72 2 119 a 14 206 112 22 260 w 15 139 181 68 212 y XX BS 56435; BS 56436; BS 56437; BS 56438; BS 56439; BS 56440; BS 56441; BS 56442; BS 56443; BS 56444; BS 56445; BS 56446; BS 56447; BS 56448; BS 56449; BS 56450; BS 56451; BS 56452; BS 56453; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB101:MA1173.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB56/MA1174.1/JASPAR XX ID MYB56:MA1174.1:JASPAR XX NA MYB56 XX DE MYB56 XX OS Arabidopsis thaliana XX BF 12471; XX P0 A C G T 01 236 49 114 201 w 02 169 73 78 280 w 03 265 106 71 158 w 04 270 80 103 147 a 05 333 91 45 131 a 06 1 3 0 596 T 07 600 0 0 0 A 08 600 0 0 0 A 09 0 600 0 0 C 10 26 35 417 122 G 11 143 0 457 0 G 12 223 41 2 334 w 13 237 143 13 207 w 14 194 58 25 323 w 15 133 135 37 295 t XX BS 56454; BS 56455; BS 56456; BS 56457; BS 56458; BS 56459; BS 56460; BS 56461; BS 56462; BS 56463; BS 56464; BS 56465; BS 56466; BS 56467; BS 56468; BS 56469; BS 56470; BS 56471; BS 56472; BS 56473; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB56:MA1174.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB81/MA1175.1/JASPAR XX ID MYB81:MA1175.1:JASPAR XX NA MYB81 XX DE MYB81 XX OS Arabidopsis thaliana XX BF 12483; XX P0 A C G T 01 149 163 223 65 s 02 30 99 0 471 T 03 600 0 0 0 A 04 600 0 0 0 A 05 0 600 0 0 C 06 118 234 114 134 c 07 94 0 506 0 G 08 268 102 0 230 w 09 264 95 1 240 w 10 124 59 7 410 T 11 113 180 39 268 y XX BS 56474; BS 56475; BS 56476; BS 56477; BS 56478; BS 56479; BS 56480; BS 56481; BS 56482; BS 56483; BS 56484; BS 56485; BS 56486; BS 56487; BS 56488; BS 56489; BS 56490; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB81:MA1175.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB119/MA1176.1/JASPAR XX ID MYB119:MA1176.1:JASPAR XX NA MYB119 XX DE MYB119 XX OS Arabidopsis thaliana XX BF 12455; XX P0 A C G T 01 93 179 78 248 y 02 287 27 188 96 r 03 252 0 117 229 w 04 173 392 33 0 m 05 16 514 68 0 C 06 0 0 598 0 G 07 0 0 0 598 T 08 0 1 0 597 T 09 576 0 1 21 A 10 13 506 7 72 C 11 316 36 155 91 r XX BS 56491; BS 56492; BS 56493; BS 56494; BS 56495; BS 56496; BS 56497; BS 56498; BS 56499; BS 56500; BS 56501; BS 56502; BS 56503; BS 56504; BS 56505; BS 56506; BS 56507; BS 56508; BS 56509; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB119:MA1176.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB65/MA1177.1/JASPAR XX ID MYB65:MA1177.1:JASPAR XX NA MYB65 XX DE MYB65 XX OS Arabidopsis thaliana XX BF 12478; XX P0 A C G T 01 284 61 105 149 a 02 129 250 41 179 y 03 105 218 65 211 y 04 183 121 205 90 r 05 75 75 0 449 T 06 599 0 0 0 A 07 599 0 0 0 A 08 0 599 0 0 C 09 38 354 118 89 c 10 76 0 523 0 G 11 178 153 4 264 h 12 280 219 2 98 m 13 266 57 75 201 w XX BS 56510; BS 56511; BS 56512; BS 56513; BS 56514; BS 56515; BS 56516; BS 56517; BS 56518; BS 56519; BS 56520; BS 56521; BS 56522; BS 56523; BS 56524; BS 56525; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB65:MA1177.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB3R1/MA1178.1/JASPAR XX ID MYB3R1:MA1178.1:JASPAR XX NA MYB3R1 XX DE MYB3R1 XX OS Arabidopsis thaliana XX BF 14428; BF 17758; XX P0 A C G T 01 274 83 91 152 w 02 290 51 87 172 w 03 327 33 22 218 w 04 191 63 52 294 w 05 232 86 123 159 w 06 45 72 51 432 T 07 220 2 228 150 d 08 422 2 126 50 A 09 48 552 0 0 C 10 0 600 0 0 C 11 0 0 600 0 G 12 0 0 0 600 T 13 0 0 0 600 T 14 317 1 235 47 r 15 164 132 192 112 r XX BS 56526; BS 56527; BS 56528; BS 56529; BS 56530; BS 56531; BS 56532; BS 56533; BS 56534; BS 56535; BS 56536; BS 56537; BS 56538; BS 56539; BS 56540; BS 56541; BS 56542; BS 56543; BS 56544; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB3R1:MA1178.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB1/MA1179.1/JASPAR XX ID MYB1:MA1179.1:JASPAR XX NA MYB1 XX DE MYB1 XX OS Arabidopsis thaliana XX BF 7514; XX P0 A C G T 01 48 10 47 39 d 02 35 17 11 81 t 03 48 8 26 62 w 04 95 1 32 16 a 05 0 144 0 0 C 06 3 89 52 0 s 07 0 0 144 0 G 08 0 0 0 144 T 09 0 0 0 144 T 10 97 0 8 39 w 11 73 16 19 36 w 12 75 13 18 38 w 13 44 11 45 44 d 14 41 36 20 47 h 15 32 35 15 62 t 16 19 38 65 22 s 17 27 25 29 63 t 18 28 23 17 76 t 19 60 3 39 42 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB1:MA1179.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB3R4/MA1180.1/JASPAR XX ID MYB3R4:MA1180.1:JASPAR XX NA MYB3R4 XX DE MYB3R4 XX OS Arabidopsis thaliana XX BF 12464; XX P0 A C G T 01 261 91 80 163 w 02 289 48 88 170 w 03 311 33 31 220 w 04 180 69 52 294 w 05 235 102 116 142 a 06 27 71 41 456 T 07 258 2 225 110 r 08 388 1 180 26 r 09 29 566 0 0 C 10 0 595 0 0 C 11 0 0 595 0 G 12 0 0 0 595 T 13 0 0 0 595 T 14 262 3 301 29 r 15 151 115 202 127 r XX BS 56536; BS 56539; BS 56545; BS 56535; BS 56546; BS 56547; BS 56544; BS 56548; BS 56529; BS 56538; BS 56530; BS 56526; BS 56549; BS 56550; BS 56542; BS 56551; BS 56541; BS 56540; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB3R4:MA1180.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB113/MA1181.1/JASPAR XX ID MYB113:MA1181.1:JASPAR XX NA MYB113 XX DE MYB113 XX OS Arabidopsis thaliana XX BF 12452; XX P0 A C G T 01 257 41 130 158 w 02 426 5 46 109 A 03 132 0 290 164 k 04 102 0 44 440 T 05 1 299 0 286 y 06 259 195 54 78 m 07 0 0 586 0 G 08 0 0 3 583 T 09 0 0 0 586 T 10 548 0 38 0 A 11 40 139 89 318 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB113:MA1181.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g09600/MA1182.1/JASPAR XX ID At3g09600:MA1182.1:JASPAR XX NA At3g09600 XX DE At3g09600 XX OS Arabidopsis thaliana XX BF 12349; XX P0 A C G T 01 490 8 38 57 A 02 0 0 593 0 G 03 593 0 0 0 A 04 0 0 0 593 T 05 590 0 0 3 A 06 0 2 0 591 T 07 0 0 0 593 T 08 50 2 0 541 T 09 115 44 35 399 t 10 132 111 92 258 t 11 167 73 133 220 w 12 145 96 123 229 t XX BS 56552; BS 56553; BS 56554; BS 56555; BS 56556; BS 56557; BS 56558; BS 56559; BS 56560; BS 56561; BS 56562; BS 56563; BS 56564; BS 56565; BS 56566; BS 56567; BS 56568; BS 56569; BS 56570; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g09600:MA1182.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g52660/MA1183.1/JASPAR XX ID At5g52660:MA1183.1:JASPAR XX NA At5g52660 XX DE At5g52660 XX OS Arabidopsis thaliana XX BF 12365; XX P0 A C G T 01 521 2 44 29 A 02 0 0 596 0 G 03 596 0 0 0 A 04 0 0 0 596 T 05 579 1 0 16 A 06 0 2 0 594 T 07 0 0 0 596 T 08 40 0 1 555 T 09 113 36 20 427 T 10 90 109 92 305 t 11 134 91 141 230 t XX BS 56571; BS 56572; BS 56573; BS 56574; BS 56575; BS 56576; BS 56577; BS 56578; BS 56579; BS 56580; BS 56581; BS 56582; BS 56583; BS 56584; BS 56585; BS 56586; BS 56587; BS 56588; BS 56589; BS 56590; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g52660:MA1183.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RVE1/MA1184.1/JASPAR XX ID RVE1:MA1184.1:JASPAR XX NA RVE1 XX DE RVE1 XX OS Arabidopsis thaliana XX BF 8892; XX P0 A C G T 01 234 117 106 143 a 02 203 147 101 149 a 03 237 124 142 97 a 04 332 42 58 168 w 05 526 0 0 74 A 06 600 0 0 0 A 07 586 5 4 5 A 08 4 0 10 586 T 09 600 0 0 0 A 10 0 0 0 600 T 11 0 600 0 0 C 12 85 42 12 461 T 13 205 103 77 215 w 14 254 130 87 129 a XX BS 56591; BS 56592; BS 56593; BS 56594; BS 56595; BS 56596; BS 56597; BS 56598; BS 56599; BS 56600; BS 56601; BS 56602; BS 56603; BS 56604; BS 56605; BS 56606; BS 56607; BS 56608; BS 56609; BS 56610; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RVE1:MA1184.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LHY1/MA1185.1/JASPAR XX ID LHY1:MA1185.1:JASPAR XX NA LHY1 XX DE LHY1 XX OS Arabidopsis thaliana XX BF 17259; BF 17711; XX P0 A C G T 01 512 1 31 55 A 02 0 0 599 0 G 03 599 0 0 0 A 04 0 0 0 599 T 05 597 2 0 0 A 06 0 8 5 586 T 07 3 0 3 593 T 08 51 6 0 542 T 09 172 46 34 347 w 10 113 144 117 225 t XX BS 56611; BS 56612; BS 56613; BS 56614; BS 56615; BS 56616; BS 56617; BS 56618; BS 56619; BS 56620; BS 56621; BS 56622; BS 56623; BS 56624; BS 56625; BS 56626; BS 56627; BS 56628; BS 56629; BS 56630; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LHY1:MA1185.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g49010/MA1186.1/JASPAR XX ID At1g49010:MA1186.1:JASPAR XX NA At1g49010 XX DE At1g49010 XX OS Arabidopsis thaliana XX BF 17712; XX P0 A C G T 01 189 152 84 174 h 02 199 103 62 235 w 03 162 112 63 262 w 04 325 65 54 155 w 05 330 20 31 218 w 06 14 321 31 233 y 07 89 428 67 15 C 08 18 12 0 569 T 09 24 54 0 521 T 10 598 0 0 1 A 11 0 0 0 599 T 12 0 599 0 0 C 13 81 279 4 235 y 14 243 49 47 260 w 15 194 202 24 179 h XX BS 56631; BS 56632; BS 56633; BS 56634; BS 56635; BS 56636; BS 56637; BS 56638; BS 56639; BS 56640; BS 56641; BS 56642; BS 56643; BS 56644; BS 56645; BS 56646; BS 56647; BS 56648; BS 56649; BS 56650; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g49010:MA1186.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LCL1/MA1187.1/JASPAR XX ID LCL1:MA1187.1:JASPAR XX NA LCL1 XX DE LCL1 XX OS Arabidopsis thaliana XX BF 12442; XX P0 A C G T 01 526 0 24 11 A 02 0 0 558 3 G 03 561 0 0 0 A 04 0 1 0 560 T 05 548 1 0 12 A 06 0 1 4 556 T 07 0 1 0 560 T 08 16 0 0 545 T 09 79 25 10 447 T 10 95 100 93 273 t XX BS 56651; BS 56652; BS 56653; BS 56654; BS 56655; BS 56656; BS 56657; BS 56658; BS 56659; BS 56660; BS 56661; BS 56662; BS 56663; BS 56664; BS 56665; BS 56666; BS 56667; BS 56668; BS 56669; BS 56670; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LCL1:MA1187.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g11280/MA1188.1/JASPAR XX ID At3g11280:MA1188.1:JASPAR XX NA At3g11280 XX DE At3g11280 XX OS Arabidopsis thaliana XX BF 12350; XX P0 A C G T 01 361 46 60 115 a 02 260 16 28 278 w 03 29 326 34 193 y 04 117 360 64 41 c 05 0 17 0 565 T 06 4 93 0 485 T 07 582 0 0 0 A 08 0 3 6 573 T 09 0 582 0 0 C 10 120 144 22 296 t 11 122 63 52 345 t 12 189 195 51 147 h 13 290 15 28 249 w 14 112 155 30 285 y XX BS 56671; BS 56672; BS 56673; BS 56674; BS 56675; BS 56676; BS 56677; BS 56678; BS 56679; BS 56680; BS 56681; BS 56682; BS 56683; BS 56684; BS 56685; BS 56686; BS 56687; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g11280:MA1188.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G61620/MA1189.1/JASPAR XX ID AT5G61620:MA1189.1:JASPAR XX NA AT5G61620 XX DE AT5G61620 XX OS Arabidopsis thaliana XX BF 12315; XX P0 A C G T 01 205 82 149 163 w 02 257 18 68 256 w 03 208 10 10 371 w 04 175 30 112 282 w 05 114 58 6 421 T 06 96 0 503 0 G 07 0 0 599 0 G 08 599 0 0 0 A 09 0 0 0 599 T 10 559 16 9 15 A 11 512 0 53 34 A 12 151 47 310 91 r 13 264 55 191 89 r 14 185 71 35 308 w 15 179 52 62 306 w XX BS 56688; BS 56689; BS 56690; BS 56691; BS 56692; BS 56693; BS 56694; BS 56695; BS 56696; BS 56697; BS 56698; BS 56699; BS 56700; BS 56701; BS 56702; BS 56703; BS 56704; BS 56705; BS 56706; BS 56707; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G61620:MA1189.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g01280/MA1190.1/JASPAR XX ID At4g01280:MA1190.1:JASPAR XX NA At4g01280 XX DE At4g01280 XX OS Arabidopsis thaliana XX BF 12354; XX P0 A C G T 01 533 4 36 26 A 02 0 0 599 0 G 03 599 0 0 0 A 04 0 0 0 599 T 05 551 0 0 48 A 06 0 1 0 598 T 07 1 0 0 598 T 08 27 0 0 572 T 09 116 33 26 424 T 10 98 107 83 311 t 11 153 105 120 221 w XX BS 56708; BS 56709; BS 56590; BS 56710; BS 56711; BS 56712; BS 56579; BS 56713; BS 56714; BS 56583; BS 56715; BS 56716; BS 56585; BS 56717; BS 56588; BS 56718; BS 56719; BS 56720; BS 56571; BS 56721; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g01280:MA1190.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G10113/MA1191.1/JASPAR XX ID AT3G10113:MA1191.1:JASPAR XX NA AT3G10113 XX DE AT3G10113 XX OS Arabidopsis thaliana XX BF 12287; XX P0 A C G T 01 169 143 95 192 w 02 234 129 93 143 a 03 207 147 93 152 w 04 226 120 147 106 a 05 334 54 51 160 w 06 540 1 5 53 A 07 599 0 0 0 A 08 596 0 3 0 A 09 0 0 3 596 T 10 599 0 0 0 A 11 0 0 0 599 T 12 0 599 0 0 C 13 108 78 15 398 t 14 199 103 79 218 w 15 287 103 91 118 a XX BS 56722; BS 56723; BS 56724; BS 56725; BS 56726; BS 56727; BS 56728; BS 56729; BS 56730; BS 56731; BS 56732; BS 56733; BS 56734; BS 56735; BS 56736; BS 56737; BS 56738; BS 56739; BS 56740; BS 56741; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G10113:MA1191.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g58900/MA1192.1/JASPAR XX ID At5g58900:MA1192.1:JASPAR XX NA At5g58900 XX DE At5g58900 XX OS Arabidopsis thaliana XX BF 12366; XX P0 A C G T 01 246 27 25 282 w 02 187 65 142 186 w 03 218 47 57 258 w 04 229 7 313 31 r 05 0 0 575 5 G 06 580 0 0 0 A 07 0 0 0 580 T 08 579 0 0 1 A 09 578 0 1 1 A 10 25 53 443 59 G 11 226 36 259 59 r 12 156 62 41 321 w 13 153 55 65 307 w 14 232 53 108 187 w 15 188 63 131 198 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g58900:MA1192.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g38090/MA1193.1/JASPAR XX ID At2g38090:MA1193.1:JASPAR XX NA At2g38090 XX DE At2g38090 XX OS Arabidopsis thaliana XX BF 12344; XX P0 A C G T 01 30 13 11 10 a 02 38 10 8 8 a 03 28 10 12 14 a 04 32 1 21 10 r 05 24 2 18 20 d 06 34 1 0 29 w 07 17 9 13 25 w 08 26 7 0 31 w 09 20 0 42 2 r 10 0 0 64 0 G 11 64 0 0 0 A 12 0 0 1 63 T 13 62 1 1 0 A 14 63 0 0 1 A 15 12 3 40 9 g 16 18 10 24 12 r 17 42 4 3 15 a 18 7 3 7 47 T 19 26 9 24 5 r 20 30 6 18 10 r 21 21 0 24 19 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g38090:MA1193.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G10580/MA1194.1/JASPAR XX ID AT3G10580:MA1194.1:JASPAR XX NA AT3G10580 XX DE AT3G10580 XX OS Arabidopsis thaliana XX BF 12288; XX P0 A C G T 01 64 14 33 29 a 02 61 2 31 46 w 03 61 4 2 73 w 04 43 14 30 53 w 05 65 12 11 52 w 06 48 5 76 11 r 07 0 0 132 8 G 08 139 1 0 0 A 09 4 0 0 136 T 10 137 0 0 3 A 11 138 0 1 1 A 12 17 6 97 20 G 13 41 37 53 9 v 14 63 0 0 77 w 15 12 22 12 94 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G10580:MA1194.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G56840/MA1195.1/JASPAR XX ID AT5G56840:MA1195.1:JASPAR XX NA AT5G56840 XX DE AT5G56840 XX OS Arabidopsis thaliana XX BF 12312; XX P0 A C G T 01 335 45 57 163 w 02 377 20 72 131 a 03 47 324 37 192 y 04 114 358 59 69 c 05 11 24 2 563 T 06 13 19 7 561 T 07 594 3 0 3 A 08 0 2 1 597 T 09 0 600 0 0 C 10 6 481 0 113 C 11 432 6 47 115 A 12 224 86 30 260 w 13 333 4 10 253 w 14 254 68 25 253 w 15 197 147 88 168 w XX BS 56742; BS 56743; BS 56744; BS 56705; BS 56745; BS 56702; BS 56746; BS 56747; BS 56748; BS 56701; BS 56749; BS 56750; BS 56751; BS 56699; BS 56688; BS 56752; BS 56695; BS 56753; BS 56754; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G56840:MA1195.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g05790/MA1196.1/JASPAR XX ID At5g05790:MA1196.1:JASPAR XX NA At5g05790 XX DE At5g05790 XX OS Arabidopsis thaliana XX BF 12359; XX P0 A C G T 01 319 79 59 130 a 02 295 2 33 257 w 03 16 340 40 191 y 04 139 348 67 33 c 05 0 22 0 565 T 06 7 112 15 453 T 07 587 0 0 0 A 08 0 0 0 587 T 09 0 587 0 0 C 10 133 164 15 275 y 11 119 70 57 341 t 12 131 200 116 140 c 13 351 0 26 210 w 14 92 119 37 339 t 15 150 256 41 140 m XX BS 56755; BS 56756; BS 56757; BS 56758; BS 56759; BS 56760; BS 56761; BS 56762; BS 56763; BS 56764; BS 56765; BS 56766; BS 56767; BS 56768; BS 56769; BS 56770; BS 56771; BS 56772; BS 56773; BS 56774; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g05790:MA1196.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CAMTA1/MA1197.1/JASPAR XX ID CAMTA1:MA1197.1:JASPAR XX NA CAMTA1 XX DE CAMTA1 XX OS Arabidopsis thaliana XX BF 17514; BF 17771; XX P0 A C G T 01 301 56 117 124 a 02 430 46 45 77 A 03 405 6 132 55 a 04 172 140 285 1 r 05 0 598 0 0 C 06 0 0 598 0 G 07 0 578 0 20 C 08 0 0 598 0 G 09 0 0 3 595 T 10 63 58 326 151 k 11 235 33 156 174 d 12 237 58 170 133 r XX BS 56775; BS 56776; BS 56777; BS 56778; BS 56779; BS 56780; BS 56781; BS 56782; BS 56783; BS 56784; BS 56785; BS 56786; BS 56787; BS 56788; BS 56789; BS 56790; BS 56791; BS 56792; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CAMTA1:MA1197.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT2/MA1198.1/JASPAR XX ID HAT2:MA1198.1:JASPAR XX NA HAT2 XX DE HAT2 XX OS Arabidopsis thaliana XX BF 12419; XX P0 A C G T 01 300 23 43 232 w 02 110 186 112 190 y 03 0 249 0 349 y 04 598 0 0 0 A 05 598 0 0 0 A 06 0 0 0 598 T 07 0 541 0 57 C 08 598 0 0 0 A 09 113 12 0 473 T 10 114 42 36 406 t 11 229 52 131 186 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT2:MA1198.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8253077 RL Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL16/MA1199.1/JASPAR XX ID AGL16:MA1199.1:JASPAR XX NA AGL16 XX DE AGL16 XX OS Arabidopsis thaliana XX BF 12220; XX P0 A C G T 01 35 19 4 360 T 02 11 0 3 404 T 03 100 11 28 279 t 04 0 418 0 0 C 05 0 357 0 61 C 06 123 83 23 189 w 07 66 77 40 235 t 08 131 0 0 287 W 09 0 4 4 410 T 10 44 59 23 292 T 11 109 35 135 139 d 12 62 0 356 0 G 13 0 0 393 25 G 14 210 44 12 152 w 15 358 15 8 37 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL16:MA1199.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL25/MA1200.1/JASPAR XX ID AGL25:MA1200.1:JASPAR XX NA AGL25 XX DE AGL25 XX OS Arabidopsis thaliana XX BF 9926; XX P0 A C G T 01 124 18 19 69 w 02 22 147 48 13 c 03 4 8 0 218 T 04 0 0 0 230 T 05 7 0 0 223 T 06 0 230 0 0 C 07 0 210 0 20 C 08 108 14 3 105 w 09 55 13 10 152 t 10 85 8 6 131 w 11 52 12 3 163 T 12 56 35 22 117 t 13 46 32 50 102 t 14 68 0 141 21 r 15 11 17 154 48 g 16 120 43 16 51 a 17 149 20 20 41 a 18 147 24 27 32 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL25:MA1200.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL42/MA1201.1/JASPAR XX ID AGL42:MA1201.1:JASPAR XX NA AGL42 XX DE AGL42 XX OS Arabidopsis thaliana XX BF 12221; XX P0 A C G T 01 0 146 0 0 C 02 146 0 0 0 A 03 0 12 0 134 T 04 0 146 0 0 C 05 146 0 0 0 A 06 0 0 0 146 T 07 17 73 16 40 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL42:MA1201.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL55/MA1202.1/JASPAR XX ID AGL55:MA1202.1:JASPAR XX NA AGL55 XX DE AGL55 XX OS Arabidopsis thaliana XX BF 12222; XX P0 A C G T 01 0 5 4 81 T 02 0 90 0 0 C 03 90 0 0 0 A 04 0 90 0 0 C 05 0 90 0 0 C 06 90 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL55:MA1202.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL63/MA1203.1/JASPAR XX ID AGL63:MA1203.1:JASPAR XX NA AGL63 XX DE AGL63 XX OS Arabidopsis thaliana XX BF 12224; XX P0 A C G T 01 91 6 39 461 T 02 94 33 194 276 k 03 8 579 0 10 C 04 10 544 0 43 C 05 444 35 81 37 A 06 457 9 33 98 A 07 542 0 0 55 A 08 456 1 1 139 A 09 412 28 27 130 A 10 102 100 24 371 t 11 64 0 522 11 G 12 4 0 591 2 G 13 282 235 20 60 m 14 546 13 2 36 A 15 473 10 28 86 A XX BS 56793; BS 56794; BS 56795; BS 56796; BS 56797; BS 56798; BS 56799; BS 56800; BS 56801; BS 56802; BS 56803; BS 56804; BS 56805; BS 56806; BS 56807; BS 56808; BS 56809; BS 56810; BS 56811; BS 56812; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL63:MA1203.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL13/MA1204.1/JASPAR XX ID AGL13:MA1204.1:JASPAR XX NA AGL13 XX DE AGL13 XX OS Arabidopsis thaliana XX BF 12219; XX P0 A C G T 01 59 3 0 157 W 02 9 0 2 208 T 03 123 2 25 69 w 04 2 217 0 0 C 05 0 161 0 58 Y 06 141 36 7 35 a 07 169 2 7 41 A 08 219 0 0 0 A 09 174 0 0 45 A 10 174 8 6 31 A 11 81 12 15 111 w 12 74 0 145 0 r 13 0 0 217 2 G 14 120 15 5 79 w 15 209 3 0 7 A 16 191 0 4 24 A 17 126 14 41 38 a 18 90 19 20 90 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL13:MA1204.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL6/MA1205.1/JASPAR XX ID AGL6:MA1205.1:JASPAR XX NA AGL6 XX DE AGL6 XX OS Arabidopsis thaliana XX BF 12223; XX P0 A C G T 01 83 8 5 386 T 02 72 1 8 401 T 03 200 8 67 207 w 04 11 465 5 1 C 05 1 394 0 87 C 06 253 92 39 98 a 07 347 8 42 85 A 08 467 0 2 13 A 09 422 0 0 60 A 10 385 18 23 56 A 11 206 49 34 193 w 12 128 0 353 1 R 13 0 0 482 0 G 14 295 71 13 103 a 15 441 4 3 34 A 16 432 4 9 37 A 17 247 61 113 61 a 18 256 27 46 153 w 19 237 41 26 178 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL6:MA1205.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF2/MA1206.1/JASPAR XX ID ARF2:MA1206.1:JASPAR XX NA ARF2 XX DE ARF2 XX OS Arabidopsis thaliana XX BF 12253; XX P0 A C G T 01 245 116 50 188 w 02 151 61 193 194 d 03 0 395 204 0 s 04 200 384 15 0 m 05 112 0 487 0 G 06 559 0 40 0 A 07 0 599 0 0 C 08 562 37 0 0 A 09 271 57 131 140 a 10 219 87 207 86 r XX BS 56813; BS 56814; BS 56815; BS 56816; BS 56817; BS 56818; BS 56819; BS 56820; BS 56821; BS 56822; BS 56823; BS 56824; BS 56825; BS 56826; BS 56827; BS 56828; BS 56829; BS 56830; BS 56831; BS 56832; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF2:MA1206.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25002510 RL Zhang JY, He SB, Li L, Yang HQ. Auxin inhibits stomatal development through MONOPTEROS repression of a mobile peptide gene STOMAGEN in mesophyll. Proc Natl Acad Sci U S A : (2014). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT3a/MA1207.1/JASPAR XX ID GT3a:MA1207.1:JASPAR XX NA GT3a XX DE GT3a XX OS Arabidopsis thaliana XX BF 12416; XX P0 A C G T 01 145 72 96 58 r 02 155 69 98 49 r 03 11 360 0 0 C 04 371 0 0 0 A 05 0 328 0 43 C 06 0 0 371 0 G 07 0 0 0 371 T 08 0 0 324 47 G 09 54 40 76 201 t 10 106 82 57 126 w 11 183 15 40 133 w 12 204 66 14 87 a 13 259 4 0 108 W 14 107 64 4 196 w 15 130 3 104 134 d 16 80 42 36 213 t 17 91 42 140 98 k XX BS 56833; BS 56834; BS 56835; BS 56836; BS 56837; BS 56838; BS 56839; BS 56840; BS 56841; BS 56842; BS 56843; BS 56844; BS 56845; BS 56846; BS 56847; BS 56848; BS 56849; BS 56850; BS 56851; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT3a:MA1207.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10437822 RL Marechal E., Hiratsuka K., Delgado J., Nairn A., Qin J., Chait B. T., Chua N. H. Modulation of GT-1 DNA-binding activity by calcium-dependent phosphorylation. Plant Mol. Biol. 40:373-386 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT2/MA1208.1/JASPAR XX ID GT2:MA1208.1:JASPAR XX NA GT2 XX DE GT2 XX OS Arabidopsis thaliana XX BF 12415; XX P0 A C G T 01 171 56 62 309 w 02 111 56 29 402 t 03 181 0 0 417 W 04 35 13 21 529 T 05 0 0 0 598 T 06 128 35 0 435 T 07 598 0 0 0 A 08 0 593 0 5 C 09 40 378 4 176 y 10 136 36 295 131 g 11 33 186 25 354 y 12 182 107 95 214 w 13 173 52 165 208 d 14 112 97 105 284 t XX BS 56852; BS 56853; BS 56854; BS 56855; BS 56856; BS 56857; BS 56858; BS 56859; BS 56860; BS 56861; BS 56862; BS 56863; BS 56864; BS 56865; BS 56866; BS 56867; BS 56868; BS 56869; BS 56870; BS 56871; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT2:MA1208.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10437822 RL Marechal E., Hiratsuka K., Delgado J., Nairn A., Qin J., Chait B. T., Chua N. H. Modulation of GT-1 DNA-binding activity by calcium-dependent phosphorylation. Plant Mol. Biol. 40:373-386 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB20/MA1209.1/JASPAR XX ID ATHB20:MA1209.1:JASPAR XX NA ATHB20 XX DE ATHB20 XX OS Arabidopsis thaliana XX BF 12321; XX P0 A C G T 01 58 59 23 90 h 02 30 115 2 83 y 03 230 0 0 0 A 04 230 0 0 0 A 05 0 0 0 230 T 06 218 0 9 3 A 07 230 0 0 0 A 08 0 0 0 230 T 09 0 1 0 229 T 10 71 19 110 30 r 11 131 27 31 41 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB20:MA1209.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT22/MA1210.1/JASPAR XX ID HAT22:MA1210.1:JASPAR XX NA HAT22 XX DE HAT22 XX OS Arabidopsis thaliana XX BF 12420; XX P0 A C G T 01 53 36 21 22 m 02 27 47 17 41 y 03 4 58 0 70 y 04 131 1 0 0 A 05 132 0 0 0 A 06 0 2 0 130 T 07 0 127 5 0 C 08 131 1 0 0 A 09 1 2 1 128 T 10 17 10 14 91 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT22:MA1210.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8253077 RL Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB18/MA1211.1/JASPAR XX ID ATHB18:MA1211.1:JASPAR XX NA ATHB18 XX DE ATHB18 XX OS Arabidopsis thaliana XX BF 12320; XX P0 A C G T 01 103 191 105 196 y 02 0 373 0 222 y 03 584 11 0 0 A 04 595 0 0 0 A 05 0 0 0 595 T 06 45 308 5 237 y 07 595 0 0 0 A 08 0 0 0 595 T 09 27 8 13 547 T 10 219 15 234 127 r 11 114 73 216 192 k XX BS 49479; BS 56872; BS 56873; BS 56874; BS 56875; BS 56876; BS 56877; BS 56878; BS 56879; BS 56880; BS 56881; BS 49482; BS 56882; BS 49484; BS 56883; BS 56884; BS 56885; BS 56886; BS 56887; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB18:MA1211.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB13/MA1212.1/JASPAR XX ID ATHB13:MA1212.1:JASPAR XX NA ATHB13 XX DE ATHB13 XX OS Arabidopsis thaliana XX BF 12319; XX P0 A C G T 01 137 147 70 246 t 02 90 295 0 215 y 03 600 0 0 0 A 04 599 0 0 1 A 05 0 0 0 600 T 06 484 109 1 6 A 07 600 0 0 0 A 08 0 2 0 598 T 09 63 2 48 487 T 10 201 70 187 142 r 11 269 62 109 160 w XX BS 49480; BS 56888; BS 56889; BS 56890; BS 56891; BS 56892; BS 56893; BS 56894; BS 56895; BS 56896; BS 56897; BS 49483; BS 56898; BS 49470; BS 49474; BS 49476; BS 56899; BS 49473; BS 56900; BS 56901; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB13:MA1212.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB21/MA1213.1/JASPAR XX ID ATHB21:MA1213.1:JASPAR XX NA ATHB21 XX DE ATHB21 XX OS Arabidopsis thaliana XX BF 12322; XX P0 A C G T 01 187 95 175 140 r 02 129 260 124 84 c 03 376 44 72 105 a 04 152 283 45 117 m 05 2 565 0 30 C 06 597 0 0 0 A 07 597 0 0 0 A 08 0 0 0 597 T 09 286 27 26 258 w 10 597 0 0 0 A 11 0 0 0 597 T 12 75 5 50 467 T 13 131 16 319 131 g 14 185 94 199 119 r XX BS 56902; BS 56903; BS 56904; BS 56905; BS 56906; BS 56907; BS 56908; BS 56909; BS 56910; BS 56911; BS 56912; BS 56913; BS 56914; BS 56915; BS 56916; BS 56917; BS 56918; BS 56919; BS 56920; BS 56921; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB21:MA1213.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB40/MA1214.1/JASPAR XX ID ATHB40:MA1214.1:JASPAR XX NA ATHB40 XX DE ATHB40 XX OS Arabidopsis thaliana XX BF 12328; XX P0 A C G T 01 233 93 118 156 w 02 213 169 95 123 m 03 404 25 68 103 a 04 111 325 68 96 c 05 21 530 0 49 C 06 600 0 0 0 A 07 600 0 0 0 A 08 0 0 0 600 T 09 388 18 25 169 w 10 600 0 0 0 A 11 0 0 0 600 T 12 56 5 41 498 T 13 92 9 397 102 g 14 255 60 141 144 a 15 221 104 126 149 a 16 171 145 133 151 w 17 192 159 79 170 h 18 206 121 56 217 w 19 216 67 70 247 w 20 261 64 54 221 w 21 221 85 51 243 w XX BS 56922; BS 56923; BS 56924; BS 56925; BS 56926; BS 56927; BS 56928; BS 56929; BS 56930; BS 56931; BS 56932; BS 56933; BS 56934; BS 56935; BS 56936; BS 56937; BS 56938; BS 56939; BS 56940; BS 56941; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB40:MA1214.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB53/MA1215.1/JASPAR XX ID ATHB53:MA1215.1:JASPAR XX NA ATHB53 XX DE ATHB53 XX OS Arabidopsis thaliana XX BF 12329; XX P0 A C G T 01 163 246 66 124 m 02 108 405 0 86 c 03 599 0 0 0 A 04 599 0 0 0 A 05 0 0 0 599 T 06 563 0 14 22 A 07 599 0 0 0 A 08 0 0 0 599 T 09 34 0 34 531 T 10 130 29 380 60 g 11 241 57 146 155 w XX BS 56942; BS 56943; BS 56944; BS 49480; BS 56945; BS 49483; BS 56946; BS 56947; BS 49481; BS 56948; BS 49470; BS 56949; BS 56950; BS 56951; BS 56952; BS 56953; BS 56954; BS 56955; BS 56956; BS 56957; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB53:MA1215.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP21/MA1216.1/JASPAR XX ID RAP21:MA1216.1:JASPAR XX NA RAP21 XX DE RAP21 XX OS Arabidopsis thaliana XX BF 2585; XX P0 A C G T 01 173 33 223 161 d 02 54 85 60 391 t 03 0 0 589 1 G 04 61 1 148 380 k 05 0 590 0 0 C 06 0 0 590 0 G 07 0 0 590 0 G 08 0 158 0 432 Y 09 0 0 567 23 G 10 115 76 363 36 g 11 171 184 49 186 h 12 110 63 303 114 g 13 159 74 244 113 r XX BS 56958; BS 56959; BS 56960; BS 56961; BS 56962; BS 56963; BS 56964; BS 56965; BS 56966; BS 56967; BS 56968; BS 56969; BS 56970; BS 56971; BS 56972; BS 56973; BS 56974; BS 56975; BS 56976; BS 56977; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP21:MA1216.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF2/MA1217.1/JASPAR XX ID CBF2:MA1217.1:JASPAR XX NA CBF2 XX DE CBF2 XX OS Arabidopsis thaliana XX BF 7500; XX P0 A C G T 01 160 173 83 179 h 02 137 202 84 172 y 03 143 115 135 202 t 04 91 170 57 277 y 05 51 223 97 224 y 06 294 0 301 0 r 07 0 582 0 13 C 08 0 595 0 0 C 09 0 0 595 0 G 10 595 0 0 0 A 11 0 595 0 0 C 12 489 24 49 33 A 13 53 46 5 491 T 14 182 190 131 92 m 15 207 91 177 120 r XX BS 56978; BS 56979; BS 56980; BS 56981; BS 56982; BS 56983; BS 56984; BS 56985; BS 56986; BS 56987; BS 56988; BS 56989; BS 56990; BS 56991; BS 56992; BS 56993; BS 56994; BS 56995; BS 56996; BS 56997; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF2:MA1217.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF4/MA1218.1/JASPAR XX ID CBF4:MA1218.1:JASPAR XX NA CBF4 XX DE CBF4 XX OS Arabidopsis thaliana XX BF 12382; XX P0 A C G T 01 113 162 78 244 y 02 103 130 190 174 k 03 410 17 72 98 A 04 34 109 52 402 t 05 0 0 597 0 G 06 0 0 0 597 T 07 0 597 0 0 C 08 0 0 597 0 G 09 21 0 576 0 G 10 0 311 0 286 y 11 200 95 245 57 r 12 274 65 165 93 r 13 214 152 88 143 m XX BS 56998; BS 56999; BS 57000; BS 57001; BS 57002; BS 57003; BS 57004; BS 57005; BS 57006; BS 57007; BS 57008; BS 57009; BS 57010; BS 57011; BS 57012; BS 57013; BS 57014; BS 57015; BS 57016; BS 57017; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF4:MA1218.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CEJ1/MA1219.1/JASPAR XX ID CEJ1:MA1219.1:JASPAR XX NA CEJ1 XX DE CEJ1 XX OS Arabidopsis thaliana XX BF 5585; XX P0 A C G T 01 73 305 75 147 c 02 101 343 46 110 c 03 230 96 129 145 a 04 82 285 65 168 y 05 104 352 39 105 c 06 193 37 153 217 d 07 43 365 44 148 c 08 5 576 7 12 C 09 508 0 92 0 A 10 0 595 0 5 C 11 2 598 0 0 C 12 19 0 580 1 G 13 274 201 0 125 m 14 1 594 1 4 C 15 315 101 100 84 a XX BS 57018; BS 57019; BS 57020; BS 57021; BS 57022; BS 57023; BS 57024; BS 57025; BS 57026; BS 57027; BS 57028; BS 57029; BS 57030; BS 57031; BS 57032; BS 57033; BS 57034; BS 57035; BS 57036; BS 57037; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CEJ1:MA1219.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TINY/MA1220.1/JASPAR XX ID TINY:MA1220.1:JASPAR XX NA TINY XX DE TINY XX OS Arabidopsis thaliana XX BF 3534; XX P0 A C G T 01 146 226 66 158 y 02 148 98 141 209 t 03 55 320 53 168 y 04 41 432 23 100 C 05 408 0 186 2 R 06 0 596 0 0 C 07 0 596 0 0 C 08 0 0 596 0 G 09 534 33 0 29 A 10 0 596 0 0 C 11 485 2 95 14 A 12 212 189 82 113 m 13 203 127 64 202 w 14 195 66 165 170 d 15 154 173 95 174 h XX BS 57038; BS 57039; BS 57040; BS 57041; BS 57042; BS 57043; BS 57044; BS 57045; BS 57046; BS 57047; BS 57048; BS 57049; BS 57050; BS 57051; BS 57052; BS 57053; BS 57054; BS 57055; BS 57056; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TINY:MA1220.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP26/MA1221.1/JASPAR XX ID RAP26:MA1221.1:JASPAR XX NA RAP26 XX DE RAP26 XX OS Arabidopsis thaliana XX BF 5568; XX P0 A C G T 01 103 139 18 337 t 02 64 22 326 185 k 03 187 11 381 18 r 04 1 574 0 22 C 05 0 0 597 0 G 06 1 15 581 0 G 07 8 567 0 22 C 08 0 3 579 15 G 09 15 60 511 11 G 10 197 310 14 76 m 11 67 9 454 67 G 12 146 47 353 51 g 13 200 173 49 175 h 14 114 32 337 114 g 15 107 62 346 82 g XX BS 57057; BS 55404; BS 57058; BS 55424; BS 55406; BS 55409; BS 55407; BS 55412; BS 55413; BS 55410; BS 55417; BS 55408; BS 55403; BS 55414; BS 57059; BS 55405; BS 57060; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP26:MA1221.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G44830/MA1222.1/JASPAR XX ID AT1G44830:MA1222.1:JASPAR XX NA AT1G44830 XX DE AT1G44830 XX OS Arabidopsis thaliana XX BF 12266; XX P0 A C G T 01 61 342 52 140 c 02 80 395 40 80 c 03 235 57 139 164 w 04 76 361 49 109 c 05 78 405 33 79 C 06 143 25 206 221 k 07 23 446 39 87 C 08 1 592 0 2 C 09 511 0 73 11 A 10 0 595 0 0 C 11 0 595 0 0 C 12 27 0 568 0 G 13 164 307 9 115 m 14 0 591 0 4 C 15 351 2 137 105 a XX BS 57061; BS 57023; BS 57062; BS 57063; BS 57064; BS 57021; BS 57031; BS 57024; BS 57034; BS 57065; BS 57018; BS 57036; BS 57066; BS 57067; BS 57068; BS 57069; BS 57070; BS 57071; BS 57072; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G44830:MA1222.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G60490/MA1223.1/JASPAR XX ID AT3G60490:MA1223.1:JASPAR XX NA AT3G60490 XX DE AT3G60490 XX OS Arabidopsis thaliana XX BF 12298; XX P0 A C G T 01 200 65 177 143 r 02 197 88 122 178 w 03 198 104 72 211 w 04 236 41 75 233 w 05 74 76 213 222 k 06 3 16 0 566 T 07 0 0 585 0 G 08 0 0 0 585 T 09 0 585 0 0 C 10 0 0 585 0 G 11 0 0 585 0 G 12 0 78 0 507 T 13 56 19 472 38 G 14 161 71 323 30 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G60490:MA1223.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF1/MA1224.1/JASPAR XX ID CBF1:MA1224.1:JASPAR XX NA CBF1 XX DE CBF1 XX OS Arabidopsis thaliana XX BF 7499; XX P0 A C G T 01 148 64 177 211 k 02 79 192 68 261 y 03 71 288 86 155 y 04 261 0 337 2 r 05 0 596 0 4 C 06 0 600 0 0 C 07 0 0 600 0 G 08 596 0 0 4 A 09 0 600 0 0 C 10 385 38 115 62 a 11 128 100 28 344 t 12 176 204 113 107 m XX BS 57073; BS 57074; BS 57075; BS 57076; BS 57077; BS 57078; BS 57079; BS 57080; BS 57081; BS 57082; BS 57083; BS 57084; BS 57085; BS 57086; BS 57087; BS 57088; BS 57089; BS 57090; BS 57091; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF1:MA1224.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF5/MA1225.1/JASPAR XX ID ERF5:MA1225.1:JASPAR XX NA ERF5 XX DE ERF5 XX OS Arabidopsis thaliana XX BF 1971; XX P0 A C G T 01 59 369 38 114 c 02 88 385 14 93 c 03 214 42 180 144 r 04 32 360 72 116 c 05 58 494 5 23 C 06 81 0 370 129 g 07 3 529 32 16 C 08 16 564 0 0 C 09 68 0 503 9 G 10 4 537 20 19 C 11 4 576 0 0 C 12 73 0 465 42 G 13 3 418 17 142 C 14 55 424 29 72 C 15 238 17 219 106 r XX BS 55403; BS 57092; BS 57093; BS 55405; BS 57094; BS 57095; BS 57096; BS 57097; BS 57098; BS 55406; BS 57099; BS 55414; BS 55409; BS 55420; BS 55404; BS 57100; BS 57101; BS 57102; BS 57103; BS 57104; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF5:MA1225.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G18450/MA1226.1/JASPAR XX ID AT5G18450:MA1226.1:JASPAR XX NA AT5G18450 XX DE AT5G18450 XX OS Arabidopsis thaliana XX BF 12362; XX P0 A C G T 01 95 41 357 94 g 02 88 54 371 74 g 03 137 179 58 213 y 04 84 49 312 142 g 05 98 42 386 61 g 06 304 133 12 138 a 07 185 0 395 7 r 08 34 0 531 22 G 09 21 509 0 57 C 10 0 0 587 0 G 11 0 0 587 0 G 12 25 156 0 406 Y 13 0 0 584 3 G 14 54 38 491 4 G 15 237 156 50 144 m XX BS 57105; BS 57106; BS 57107; BS 57108; BS 57109; BS 57110; BS 57111; BS 57112; BS 57113; BS 57114; BS 57115; BS 57116; BS 57117; BS 57118; BS 57119; BS 57120; BS 57121; BS 57122; BS 57123; BS 57124; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G18450:MA1226.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G12630/MA1227.1/JASPAR XX ID AT1G12630:MA1227.1:JASPAR XX NA AT1G12630 XX DE AT1G12630 XX OS Arabidopsis thaliana XX BF 12259; XX P0 A C G T 01 132 222 79 167 y 02 147 128 176 149 g 03 131 206 102 161 y 04 106 256 95 143 c 05 180 98 197 125 r 06 108 229 97 166 y 07 140 235 75 150 y 08 178 79 188 155 d 09 139 204 76 181 y 10 111 258 56 175 y 11 106 83 189 222 k 12 78 234 27 261 y 13 19 316 18 247 y 14 256 1 339 4 r 15 0 595 0 5 C 16 0 600 0 0 C 17 0 0 600 0 G 18 462 47 1 90 A 19 0 600 0 0 C 20 454 2 124 20 A 21 191 183 94 132 m XX BS 57125; BS 57126; BS 57127; BS 57128; BS 57129; BS 57130; BS 57131; BS 57132; BS 57133; BS 57134; BS 57135; BS 57136; BS 57137; BS 57138; BS 57139; BS 57140; BS 57141; BS 57142; BS 57143; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G12630:MA1227.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G18450/MA1228.1/JASPAR XX ID AT4G18450:MA1228.1:JASPAR XX NA AT4G18450 XX DE AT4G18450 XX OS Arabidopsis thaliana XX BF 12346; BF 12301; XX P0 A C G T 01 187 52 263 35 r 02 78 289 0 170 y 03 0 0 534 3 G 04 34 0 503 0 G 05 0 526 0 11 C 06 0 0 537 0 G 07 0 0 537 0 G 08 13 505 0 19 C 09 6 7 472 52 G 10 85 69 378 5 G 11 179 205 32 121 m 12 91 25 337 84 g 13 128 48 288 73 g 14 124 221 72 120 c 15 104 50 299 84 g 16 101 68 290 78 g 17 127 182 83 145 y XX BS 57144; BS 57145; BS 57146; BS 57147; BS 57148; BS 57149; BS 57150; BS 57151; BS 57152; BS 57153; BS 57154; BS 57155; BS 57156; BS 57157; BS 57158; BS 57159; BS 57160; BS 57161; BS 57162; BS 57163; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G18450:MA1228.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G44940/MA1229.1/JASPAR XX ID AT2G44940:MA1229.1:JASPAR XX NA AT2G44940 XX DE AT2G44940 XX OS Arabidopsis thaliana XX BF 12346; XX P0 A C G T 01 176 154 66 164 h 02 192 55 134 179 w 03 91 89 184 196 k 04 25 85 2 448 T 05 0 0 560 0 G 06 18 0 14 528 T 07 0 560 0 0 C 08 0 0 560 0 G 09 0 0 560 0 G 10 0 114 0 446 T 11 74 19 434 33 G 12 154 71 287 48 r 13 178 150 71 161 h 14 145 63 217 135 r 15 151 78 164 167 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G44940:MA1229.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G77200/MA1230.1/JASPAR XX ID AT1G77200:MA1230.1:JASPAR XX NA AT1G77200 XX DE AT1G77200 XX OS Arabidopsis thaliana XX BF 8869; XX P0 A C G T 01 47 307 65 179 y 02 37 446 31 84 C 03 443 0 155 0 R 04 0 598 0 0 C 05 0 598 0 0 C 06 0 0 598 0 G 07 589 3 0 6 A 08 0 598 0 0 C 09 529 0 62 7 A 10 232 199 70 97 m 11 229 110 39 220 w 12 188 79 112 219 w 13 154 142 101 201 w 14 136 213 62 187 y XX BS 57164; BS 57165; BS 57166; BS 57167; BS 57168; BS 57169; BS 57170; BS 57171; BS 57172; BS 57173; BS 57174; BS 57175; BS 57176; BS 57177; BS 57178; BS 57179; BS 57180; BS 57181; BS 57182; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G77200:MA1230.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF15/MA1231.1/JASPAR XX ID ERF15:MA1231.1:JASPAR XX NA ERF15 XX DE ERF15 XX OS Arabidopsis thaliana XX BF 4982; XX P0 A C G T 01 110 295 76 115 c 02 169 80 193 154 d 03 75 327 51 143 c 04 112 335 9 140 c 05 181 45 172 198 d 06 24 369 69 134 c 07 156 432 8 0 M 08 35 0 550 11 G 09 0 596 0 0 C 10 24 572 0 0 C 11 16 0 575 5 G 12 0 570 0 26 C 13 2 593 0 1 C 14 208 0 322 66 r 15 26 332 33 205 y XX BS 57183; BS 57184; BS 57185; BS 57186; BS 57187; BS 57188; BS 57189; BS 57190; BS 57191; BS 57192; BS 57193; BS 57194; BS 57195; BS 57196; BS 57197; BS 57198; BS 57199; BS 57200; BS 57201; BS 57202; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF15:MA1231.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G28140/MA1232.1/JASPAR XX ID AT4G28140:MA1232.1:JASPAR XX NA AT4G28140 XX DE AT4G28140 XX OS Arabidopsis thaliana XX BF 12356; XX P0 A C G T 01 11 3 546 7 G 02 153 21 199 194 d 03 1 564 0 2 C 04 0 0 567 0 G 05 0 2 565 0 G 06 0 213 0 354 y 07 23 12 484 48 G 08 77 96 374 20 g 09 213 190 40 124 m 10 99 30 330 108 g 11 179 62 236 90 r 12 142 178 85 162 h 13 108 71 275 113 g 14 132 82 264 89 g 15 115 158 93 201 y 16 125 83 282 77 g 17 121 92 250 104 g 18 115 153 110 189 y 19 121 97 245 104 g 20 144 85 231 107 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G28140:MA1232.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G71450/MA1233.1/JASPAR XX ID AT1G71450:MA1233.1:JASPAR XX NA AT1G71450 XX DE AT1G71450 XX OS Arabidopsis thaliana XX BF 17509; BF 12271; XX P0 A C G T 01 96 354 28 90 c 02 211 75 130 152 w 03 54 352 54 108 c 04 52 417 37 62 C 05 190 0 253 125 r 06 63 383 14 108 c 07 58 430 14 66 C 08 180 33 243 112 r 09 63 341 30 134 c 10 66 406 24 72 C 11 165 32 205 166 d 12 37 340 38 153 y 13 35 463 5 65 C 14 249 3 238 78 r 15 23 507 14 24 C 16 24 526 4 14 C 17 75 5 445 43 G 18 95 290 24 159 y 19 19 526 3 20 C 20 274 9 189 96 r XX BS 57203; BS 57204; BS 57205; BS 57206; BS 57207; BS 57208; BS 57209; BS 57210; BS 57211; BS 57212; BS 57213; BS 57214; BS 57215; BS 57216; BS 57217; BS 57218; BS 57219; BS 57220; BS 57221; BS 57222; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G71450:MA1233.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G19210/MA1234.1/JASPAR XX ID AT1G19210:MA1234.1:JASPAR XX NA AT1G19210 XX DE AT1G19210 XX OS Arabidopsis thaliana XX BF 12331; XX P0 A C G T 01 217 45 183 154 d 02 127 34 53 385 t 03 47 19 403 130 g 04 0 0 599 0 G 05 291 79 42 187 w 06 0 599 0 0 C 07 0 0 599 0 G 08 0 0 599 0 G 09 43 185 0 371 y 10 27 9 524 39 G 11 160 72 306 61 r 12 195 157 84 163 h 13 136 46 292 125 g 14 192 83 226 98 r XX BS 57223; BS 57224; BS 57225; BS 57226; BS 57227; BS 57228; BS 57229; BS 57230; BS 57231; BS 57232; BS 57233; BS 57234; BS 57235; BS 57236; BS 57237; BS 57238; BS 57239; BS 57240; BS 57241; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G19210:MA1234.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AIL7/MA1235.1/JASPAR XX ID AIL7:MA1235.1:JASPAR XX NA AIL7 XX DE AIL7 XX OS Arabidopsis thaliana XX BF 5610; XX P0 A C G T 01 11 515 1 12 C 02 114 17 380 28 G 03 182 103 158 96 r 04 227 46 30 236 w 05 86 40 11 402 T 06 93 249 2 195 y 07 33 308 0 198 y 08 0 539 0 0 C 09 133 18 353 35 g 10 517 0 0 22 A 11 32 6 403 98 G XX BS 57242; BS 57243; BS 57244; BS 57245; BS 57246; BS 57247; BS 57248; BS 57249; BS 57250; BS 57251; BS 57252; BS 57253; BS 57254; BS 57255; BS 57256; BS 57257; BS 57258; BS 57259; BS 57260; BS 57261; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AIL7:MA1235.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11058102 RL Nole-Wilson S., Krizek B. A. DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA. Nucleic Acids Res. 28:4076-4082 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ESE3/MA1236.1/JASPAR XX ID ESE3:MA1236.1:JASPAR XX NA ESE3 XX DE ESE3 XX OS Arabidopsis thaliana XX BF 12402; XX P0 A C G T 01 148 219 100 129 c 02 96 48 362 90 g 03 113 65 368 50 g 04 186 185 64 161 h 05 146 26 307 117 g 06 114 30 331 121 g 07 178 153 28 237 h 08 90 7 374 125 g 09 146 17 385 48 g 10 12 543 0 41 C 11 0 0 596 0 G 12 1 3 592 0 G 13 29 400 0 167 y 14 0 0 587 9 G 15 15 45 524 12 G 16 270 211 19 96 m 17 46 9 501 40 G 18 146 69 347 34 g 19 233 98 74 191 w XX BS 57262; BS 57263; BS 57264; BS 57265; BS 57266; BS 57267; BS 57268; BS 57269; BS 57270; BS 57271; BS 57272; BS 57273; BS 57274; BS 57275; BS 57276; BS 57277; BS 57278; BS 57279; BS 57280; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ESE3:MA1236.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G16750/MA1237.1/JASPAR XX ID AT4G16750:MA1237.1:JASPAR XX NA AT4G16750 XX DE AT4G16750 XX OS Arabidopsis thaliana XX BF 2592; XX P0 A C G T 01 122 277 72 129 c 02 186 97 166 151 d 03 113 226 91 170 y 04 102 326 41 131 c 05 161 63 192 184 d 06 66 301 47 186 y 07 30 494 20 56 C 08 366 0 227 7 r 09 0 593 4 3 C 10 0 600 0 0 C 11 10 0 590 0 G 12 405 110 1 84 a 13 0 599 0 1 C 14 385 14 160 41 r 15 177 210 79 134 m XX BS 57281; BS 57282; BS 57283; BS 57284; BS 57285; BS 57286; BS 57287; BS 57288; BS 57289; BS 57290; BS 57291; BS 57292; BS 57293; BS 57294; BS 57295; BS 57296; BS 57297; BS 57298; BS 57299; BS 57300; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G16750:MA1237.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF38/MA1238.1/JASPAR XX ID ERF38:MA1238.1:JASPAR XX NA ERF38 XX DE ERF38 XX OS Arabidopsis thaliana XX BF 5578; XX P0 A C G T 01 28 122 0 448 T 02 0 0 597 1 G 03 65 4 49 480 T 04 0 598 0 0 C 05 0 0 598 0 G 06 0 0 598 0 G 07 0 151 0 447 Y 08 58 10 491 39 G 09 179 48 315 56 r 10 198 191 58 151 h 11 127 57 279 135 g 12 178 70 205 145 r 13 166 157 86 189 h 14 144 74 251 129 g 15 185 79 222 112 r XX BS 57033; BS 57301; BS 57302; BS 57303; BS 57304; BS 57305; BS 57306; BS 57307; BS 57308; BS 57309; BS 57310; BS 57037; BS 57311; BS 57312; BS 57313; BS 57020; BS 57314; BS 57315; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF38:MA1238.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF104/MA1239.1/JASPAR XX ID ERF104:MA1239.1:JASPAR XX NA ERF104 XX DE ERF104 XX OS Arabidopsis thaliana XX BF 4391; XX P0 A C G T 01 78 299 75 105 c 02 151 96 194 116 r 03 81 317 58 101 c 04 97 309 56 95 c 05 165 61 207 124 r 06 67 293 56 141 y 07 86 363 33 75 c 08 125 50 213 169 k 09 22 369 76 90 c 10 82 464 6 5 C 11 36 0 496 25 G 12 0 555 2 0 C 13 0 557 0 0 C 14 27 0 527 3 G 15 2 466 0 89 C 16 4 553 0 0 C 17 214 0 281 62 r 18 40 274 51 192 y 19 130 218 60 149 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF104:MA1239.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF10/MA1240.1/JASPAR XX ID ERF10:MA1240.1:JASPAR XX NA ERF10 XX DE ERF10 XX OS Arabidopsis thaliana XX BF 12397; XX P0 A C G T 01 146 117 138 170 w 02 79 288 74 130 c 03 110 273 68 120 c 04 177 88 177 129 r 05 107 286 74 104 c 06 84 311 56 120 c 07 139 96 175 161 k 08 90 283 49 149 y 09 115 324 10 122 c 10 151 64 173 183 d 11 35 342 75 119 c 12 23 538 6 4 C 13 38 0 448 85 G 14 0 571 0 0 C 15 0 571 0 0 C 16 27 0 544 0 G 17 5 511 0 55 C 18 34 528 0 9 C 19 195 0 323 53 r 20 44 310 42 175 y 21 143 182 86 160 h XX BS 57316; BS 57317; BS 57318; BS 57319; BS 57320; BS 57321; BS 57322; BS 57323; BS 57324; BS 57325; BS 57326; BS 57327; BS 57328; BS 57329; BS 57330; BS 57331; BS 57332; BS 57333; BS 57334; BS 57335; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF10:MA1240.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G32800/MA1241.1/JASPAR XX ID AT4G32800:MA1241.1:JASPAR XX NA AT4G32800 XX DE AT4G32800 XX OS Arabidopsis thaliana XX BF 2594; XX P0 A C G T 01 174 184 82 151 h 02 169 81 153 188 d 03 29 352 83 127 c 04 18 537 14 22 C 05 540 0 51 0 A 06 0 591 0 0 C 07 0 591 0 0 C 08 0 0 591 0 G 09 588 0 0 3 A 10 0 591 0 0 C 11 567 0 23 1 A 12 215 202 81 93 m 13 222 97 38 234 w 14 197 86 97 211 w 15 161 138 96 196 w 16 137 191 73 190 y XX BS 57336; BS 57337; BS 57338; BS 57339; BS 57340; BS 57341; BS 57342; BS 57343; BS 57344; BS 57345; BS 57346; BS 57347; BS 57348; BS 57349; BS 57350; BS 57351; BS 57352; BS 57353; BS 57354; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G32800:MA1241.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G57600/MA1242.1/JASPAR XX ID AT3G57600:MA1242.1:JASPAR XX NA AT3G57600 XX DE AT3G57600 XX OS Arabidopsis thaliana XX BF 12296; XX P0 A C G T 01 39 309 39 91 c 02 48 347 16 67 C 03 118 11 217 132 k 04 0 458 6 14 C 05 1 477 0 0 C 06 347 0 131 0 R 07 0 478 0 0 C 08 0 475 0 3 C 09 25 0 453 0 G 10 21 438 0 19 C 11 20 346 2 110 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G57600:MA1242.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB19/MA1243.1/JASPAR XX ID DREB19:MA1243.1:JASPAR XX NA DREB19 XX DE DREB19 XX OS Arabidopsis thaliana XX BF 12394; XX P0 A C G T 01 132 194 106 165 y 02 202 102 118 175 w 03 135 214 92 156 y 04 154 218 67 158 h 05 119 86 117 275 t 06 175 202 70 150 h 07 257 329 7 4 m 08 531 0 66 0 A 09 0 597 0 0 C 10 0 597 0 0 C 11 0 0 597 0 G 12 431 164 0 2 M 13 0 597 0 0 C 14 364 31 8 194 w 15 40 106 3 448 T 16 240 74 33 250 w 17 252 65 155 125 r XX BS 57355; BS 57356; BS 57357; BS 57358; BS 57359; BS 57360; BS 57361; BS 57362; BS 57363; BS 57364; BS 57365; BS 57366; BS 57367; BS 57368; BS 57369; BS 57370; BS 57371; BS 57372; BS 57373; BS 57374; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB19:MA1243.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABR1/MA1244.1/JASPAR XX ID ABR1:MA1244.1:JASPAR XX NA ABR1 XX DE ABR1 XX OS Arabidopsis thaliana XX BF 12217; XX P0 A C G T 01 122 57 317 104 g 02 145 75 281 99 g 03 140 230 96 134 c 04 100 64 308 128 g 05 181 79 285 55 r 06 237 149 79 135 a 07 225 26 186 163 d 08 253 18 193 136 r 09 103 97 14 386 t 10 59 15 308 218 k 11 150 27 401 22 r 12 2 590 0 8 C 13 0 0 598 2 G 14 0 12 588 0 G 15 4 584 0 12 C 16 5 10 550 35 G 17 33 105 445 17 G 18 196 298 30 76 m 19 66 36 421 77 G XX BS 57375; BS 57376; BS 57377; BS 57378; BS 57379; BS 57380; BS 57381; BS 57382; BS 57383; BS 57384; BS 57385; BS 57386; BS 57387; BS 57388; BS 57389; BS 57390; BS 57391; BS 57392; BS 57393; BS 57394; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABR1:MA1244.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G33710/MA1245.1/JASPAR XX ID AT2G33710:MA1245.1:JASPAR XX NA AT2G33710 XX DE AT2G33710 XX OS Arabidopsis thaliana XX BF 10420; BF 17734; XX P0 A C G T 01 79 308 76 120 c 02 108 329 35 111 c 03 176 49 178 180 d 04 59 342 47 135 c 05 63 475 13 32 C 06 65 8 350 160 k 07 3 456 112 12 C 08 7 573 3 0 C 09 25 0 551 7 G 10 0 572 11 0 C 11 0 583 0 0 C 12 31 0 551 1 G 13 8 372 11 192 y 14 149 350 17 67 m 15 293 11 156 123 r XX BS 55421; BS 55405; BS 55424; BS 57058; BS 55406; BS 55409; BS 55411; BS 55422; BS 55423; BS 55412; BS 57096; BS 55403; BS 57395; BS 55417; BS 55414; BS 55420; BS 57060; BS 55404; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G33710:MA1245.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LEP/MA1246.1/JASPAR XX ID LEP:MA1246.1:JASPAR XX NA LEP XX DE LEP XX OS Arabidopsis thaliana XX BF 12443; XX P0 A C G T 01 125 74 128 163 d 02 40 250 78 122 c 03 36 413 9 32 C 04 69 23 226 172 k 05 4 398 52 36 C 06 2 488 0 0 C 07 26 0 456 8 G 08 0 480 0 10 C 09 0 489 0 1 C 10 23 0 460 7 G 11 12 301 20 157 y 12 75 303 22 90 c 13 206 27 146 111 r 14 119 232 44 95 c 15 133 189 41 127 h 16 125 56 187 122 r 17 61 252 56 121 c 18 108 254 48 80 c 19 72 80 222 116 g 20 88 240 51 111 c 21 68 278 44 100 c XX BS 57396; BS 57397; BS 57398; BS 57399; BS 57400; BS 57401; BS 57325; BS 57402; BS 57403; BS 57404; BS 57405; BS 57406; BS 57407; BS 57408; BS 57409; BS 57410; BS 57411; BS 57412; BS 57413; BS 57414; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LEP:MA1246.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G28160/MA1247.1/JASPAR XX ID AT1G28160:MA1247.1:JASPAR XX NA AT1G28160 XX DE AT1G28160 XX OS Arabidopsis thaliana XX BF 12265; XX P0 A C G T 01 129 178 28 260 y 02 97 38 374 86 g 03 212 11 366 6 r 04 8 577 0 10 C 05 0 0 595 0 G 06 6 1 586 2 G 07 0 586 0 9 C 08 0 0 594 1 G 09 15 55 511 14 G 10 200 314 11 70 m 11 42 15 485 53 G 12 165 64 301 65 r 13 182 165 65 183 h 14 133 42 294 126 g 15 125 69 296 105 g XX BS 55418; BS 55409; BS 55420; BS 57060; BS 55406; BS 55419; BS 57415; BS 57416; BS 55408; BS 55413; BS 55412; BS 55403; BS 57104; BS 55417; BS 55414; BS 55416; BS 55405; BS 57092; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G28160:MA1247.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB26/MA1248.1/JASPAR XX ID DREB26:MA1248.1:JASPAR XX NA DREB26 XX DE DREB26 XX OS Arabidopsis thaliana XX BF 2583; XX P0 A C G T 01 108 226 85 149 y 02 122 257 65 124 c 03 189 104 132 143 w 04 114 260 77 117 c 05 110 274 66 118 c 06 193 92 134 149 w 07 106 250 69 143 y 08 110 277 52 129 c 09 211 69 136 152 w 10 106 259 71 132 c 11 102 306 51 109 c 12 174 42 143 209 d 13 26 394 50 98 C 14 0 568 0 0 C 15 530 0 36 2 A 16 0 568 0 0 C 17 1 567 0 0 C 18 4 1 563 0 G 19 299 171 0 98 m 20 0 558 0 10 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB26:MA1248.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP210/MA1249.1/JASPAR XX ID RAP210:MA1249.1:JASPAR XX NA RAP210 XX DE RAP210 XX OS Arabidopsis thaliana XX BF 5593; BF 2596; XX P0 A C G T 01 169 140 88 202 w 02 204 67 119 209 w 03 115 104 156 224 k 04 11 98 2 488 T 05 0 0 598 1 G 06 26 0 10 563 T 07 0 599 0 0 C 08 0 0 599 0 G 09 30 0 569 0 G 10 0 454 2 143 C 11 285 34 213 67 r 12 271 46 205 77 r 13 226 154 103 116 m 14 187 82 204 126 r 15 180 77 195 147 r XX BS 57417; BS 57418; BS 57419; BS 57420; BS 57421; BS 57422; BS 57423; BS 57424; BS 57425; BS 57426; BS 57427; BS 57428; BS 57429; BS 57430; BS 57431; BS 57432; BS 57433; BS 57434; BS 57435; BS 57436; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP210:MA1249.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G75490/MA1250.1/JASPAR XX ID AT1G75490:MA1250.1:JASPAR XX NA AT1G75490 XX DE AT1G75490 XX OS Arabidopsis thaliana XX BF 10418; XX P0 A C G T 01 59 334 55 109 c 02 93 340 34 90 c 03 205 73 150 129 r 04 50 340 53 114 c 05 74 360 30 93 c 06 118 13 205 221 k 07 19 489 18 31 C 08 6 551 0 0 C 09 396 0 160 1 R 10 0 554 1 2 C 11 1 556 0 0 C 12 32 0 519 6 G 13 74 366 10 107 c 14 21 395 8 133 C 15 237 21 127 172 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G75490:MA1250.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR5/MA1251.1/JASPAR XX ID DEAR5:MA1251.1:JASPAR XX NA DEAR5 XX DE DEAR5 XX OS Arabidopsis thaliana XX BF 12390; XX P0 A C G T 01 144 196 94 159 y 02 174 117 125 177 w 03 144 151 106 192 y 04 145 182 93 173 y 05 184 127 137 145 a 06 147 170 100 176 y 07 173 187 82 151 h 08 197 66 147 183 w 09 44 259 86 204 y 10 6 582 3 2 C 11 550 0 42 1 A 12 0 593 0 0 C 13 0 593 0 0 C 14 0 0 593 0 G 15 566 9 0 18 A 16 0 593 0 0 C 17 396 162 14 21 m 18 278 100 6 209 w 19 170 134 72 217 w XX BS 57437; BS 57438; BS 57439; BS 57440; BS 57441; BS 57442; BS 57443; BS 57444; BS 57445; BS 57446; BS 57447; BS 57448; BS 57449; BS 57450; BS 57451; BS 57452; BS 57453; BS 57454; BS 57455; BS 57456; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR5:MA1251.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PUCHI/MA1252.1/JASPAR XX ID PUCHI:MA1252.1:JASPAR XX NA PUCHI XX DE PUCHI XX OS Arabidopsis thaliana XX BF 12503; XX P0 A C G T 01 86 245 46 101 c 02 84 255 26 113 c 03 148 42 150 138 d 04 61 254 37 126 y 05 39 397 0 42 C 06 59 0 256 163 k 07 0 397 61 20 C 08 1 477 0 0 C 09 8 0 469 1 G 10 2 466 1 9 C 11 3 475 0 0 C 12 13 0 459 6 G 13 8 260 11 199 y 14 104 214 34 126 y 15 194 37 123 124 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PUCHI:MA1252.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G16280/MA1253.1/JASPAR XX ID AT3G16280:MA1253.1:JASPAR XX NA AT3G16280 XX DE AT3G16280 XX OS Arabidopsis thaliana XX BF 12290; XX P0 A C G T 01 163 107 93 198 w 02 202 64 114 181 w 03 116 78 170 197 k 04 38 55 33 435 T 05 25 32 479 25 G 06 0 0 5 556 T 07 0 559 0 2 C 08 0 0 561 0 G 09 6 0 555 0 G 10 27 55 16 463 T 11 50 20 444 47 G 12 141 81 268 71 r 13 171 165 68 157 h 14 164 72 187 138 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G16280:MA1253.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF13/MA1254.1/JASPAR XX ID ERF13:MA1254.1:JASPAR XX NA ERF13 XX DE ERF13 XX OS Arabidopsis thaliana XX BF 2589; XX P0 A C G T 01 136 261 54 119 c 02 109 71 138 252 t 03 19 334 104 113 c 04 241 300 28 1 m 05 3 0 567 0 G 06 0 570 0 0 C 07 0 570 0 0 C 08 3 0 567 0 G 09 20 518 0 32 C 10 0 570 0 0 C 11 309 7 151 103 r 12 85 124 16 345 t 13 140 126 37 267 t 14 143 47 127 253 w 15 84 231 77 178 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF13:MA1254.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G22810/MA1255.1/JASPAR XX ID AT1G22810:MA1255.1:JASPAR XX NA AT1G22810 XX DE AT1G22810 XX OS Arabidopsis thaliana XX BF 12332; XX P0 A C G T 01 80 33 417 66 G 02 118 66 339 73 g 03 131 222 41 202 y 04 87 37 347 125 g 05 102 22 373 99 g 06 41 180 22 353 y 07 0 0 596 0 G 08 122 30 300 144 g 09 9 532 0 55 C 10 1 0 595 0 G 11 10 0 583 3 G 12 31 128 0 437 T 13 6 0 576 14 G 14 129 45 409 13 G 15 234 164 43 155 h XX BS 57457; BS 57458; BS 57459; BS 57460; BS 57461; BS 57462; BS 57117; BS 57463; BS 57464; BS 57465; BS 57466; BS 57467; BS 57468; BS 57469; BS 57115; BS 57470; BS 57112; BS 57113; BS 57471; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G22810:MA1255.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP212/MA1256.1/JASPAR XX ID RAP212:MA1256.1:JASPAR XX NA RAP212 XX DE RAP212 XX OS Arabidopsis thaliana XX BF 12504; XX P0 A C G T 01 127 224 119 127 c 02 133 64 286 114 g 03 140 86 276 95 g 04 159 192 90 156 h 05 133 83 250 131 g 06 191 72 250 84 r 07 244 131 52 170 w 08 266 14 170 147 r 09 274 15 184 124 r 10 68 207 4 318 y 11 10 6 494 87 G 12 52 0 542 3 G 13 0 596 0 1 C 14 0 0 596 1 G 15 0 0 596 1 G 16 7 575 0 15 C 17 9 6 517 65 G 18 66 101 402 28 g 19 228 188 49 132 m 20 98 42 350 107 g 21 155 81 252 109 r XX BS 57472; BS 57473; BS 57474; BS 57475; BS 57476; BS 57477; BS 57478; BS 57479; BS 57480; BS 57481; BS 57482; BS 57483; BS 57484; BS 57485; BS 57486; BS 57487; BS 57488; BS 57489; BS 57490; BS 57491; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP212:MA1256.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF9/MA1257.1/JASPAR XX ID ERF9:MA1257.1:JASPAR XX NA ERF9 XX DE ERF9 XX OS Arabidopsis thaliana XX BF 12400; XX P0 A C G T 01 90 246 79 140 y 02 89 24 353 89 g 03 109 50 336 60 g 04 106 265 69 115 c 05 83 32 343 97 g 06 106 63 333 53 g 07 143 239 39 134 m 08 104 32 269 150 k 09 161 37 270 87 r 10 111 167 17 260 y 11 73 6 383 93 G 12 167 15 360 13 r 13 26 496 0 33 C 14 0 0 551 4 G 15 10 0 544 1 G 16 16 493 0 46 C 17 4 0 514 37 G 18 31 34 483 7 G 19 204 253 6 92 m 20 52 8 439 56 G 21 161 71 264 59 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF9:MA1257.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB2/MA1258.1/JASPAR XX ID DREB2:MA1258.1:JASPAR XX NA DREB2 XX DE DREB2 XX OS Arabidopsis thaliana XX BF 3092; XX P0 A C G T 01 166 130 102 183 w 02 138 82 243 118 g 03 155 78 204 144 r 04 103 149 76 253 y 05 166 54 146 215 d 06 360 9 162 50 r 07 219 19 35 308 w 08 0 0 581 0 G 09 18 0 226 337 k 10 2 579 0 0 C 11 0 0 581 0 G 12 1 0 580 0 G 13 0 78 0 503 T 14 16 25 413 127 G 15 145 68 267 101 g 16 212 129 67 173 w 17 127 48 270 136 g 18 149 74 258 100 r 19 160 129 108 184 w 20 149 87 225 120 r 21 182 91 206 102 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB2:MA1258.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9952441 RL Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G01250/MA1259.1/JASPAR XX ID AT1G01250:MA1259.1:JASPAR XX NA AT1G01250 XX DE AT1G01250 XX OS Arabidopsis thaliana XX BF 12256; XX P0 A C G T 01 161 75 222 114 r 02 171 90 168 143 d 03 195 116 63 198 w 04 204 47 124 197 w 05 103 73 184 212 k 06 12 64 7 489 T 07 0 0 572 0 G 08 40 1 26 505 T 09 0 572 0 0 C 10 0 0 572 0 G 11 0 0 572 0 G 12 1 46 0 525 T 13 17 7 540 8 G 14 162 67 308 35 r 15 165 149 70 188 h XX BS 57492; BS 57493; BS 57494; BS 57495; BS 57496; BS 57497; BS 57498; BS 57499; BS 57500; BS 57501; BS 57502; BS 57503; BS 57504; BS 57505; BS 57506; BS 57507; BS 57508; BS 57509; BS 57510; BS 57511; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G01250:MA1259.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G77640/MA1260.1/JASPAR XX ID AT1G77640:MA1260.1:JASPAR XX NA AT1G77640 XX DE AT1G77640 XX OS Arabidopsis thaliana XX BF 12339; XX P0 A C G T 01 101 80 237 123 g 02 136 86 191 128 r 03 139 129 117 156 w 04 113 77 255 96 g 05 125 79 209 128 g 06 128 143 92 178 y 07 122 46 270 103 g 08 136 85 194 126 r 09 147 153 57 184 h 10 141 53 202 145 d 11 128 39 233 141 k 12 59 82 10 390 T 13 0 0 541 0 G 14 111 5 133 292 t 15 0 540 0 1 C 16 0 0 541 0 G 17 0 0 541 0 G 18 4 11 0 526 T 19 3 0 538 0 G 20 104 45 351 41 g 21 198 128 60 155 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G77640:MA1260.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G67000/MA1261.1/JASPAR XX ID AT5G67000:MA1261.1:JASPAR XX NA AT5G67000 XX DE AT5G67000 XX OS Arabidopsis thaliana XX BF 12369; XX P0 A C G T 01 34 47 15 42 y 02 26 20 42 50 k 03 39 7 57 35 d 04 40 30 14 54 w 05 10 35 16 77 y 06 55 0 80 3 r 07 0 120 0 18 C 08 0 0 136 2 G 09 0 0 138 0 G 10 0 106 0 32 C 11 0 3 89 46 k 12 25 0 106 7 G 13 41 53 9 35 h 14 0 10 91 37 k 15 25 26 67 20 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G67000:MA1261.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF2/MA1262.1/JASPAR XX ID ERF2:MA1262.1:JASPAR XX NA ERF2 XX DE ERF2 XX OS Arabidopsis thaliana XX BF 2867; XX P0 A C G T 01 99 276 73 147 c 02 117 278 74 126 c 03 169 82 187 157 d 04 92 314 74 115 c 05 114 293 74 114 c 06 162 83 220 130 r 07 65 325 63 142 c 08 102 348 27 118 c 09 162 46 190 197 d 10 34 367 85 109 c 11 118 451 9 17 C 12 42 0 509 44 G 13 3 590 0 2 C 14 7 588 0 0 C 15 43 0 550 2 G 16 0 565 0 30 C 17 0 595 0 0 C 18 177 0 353 65 r 19 26 305 52 212 y 20 122 251 78 144 c 21 218 29 212 136 r XX BS 57512; BS 55359; BS 57513; BS 57514; BS 57515; BS 57516; BS 57517; BS 57518; BS 57519; BS 57520; BS 57521; BS 57522; BS 57523; BS 57524; BS 57525; BS 55351; BS 55343; BS 55350; BS 57526; BS 57527; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF2:MA1262.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G36060/MA1263.1/JASPAR XX ID AT1G36060:MA1263.1:JASPAR XX NA AT1G36060 XX DE AT1G36060 XX OS Arabidopsis thaliana XX BF 12333; XX P0 A C G T 01 232 21 145 200 w 02 132 37 133 296 t 03 50 45 277 226 k 04 0 0 598 0 G 05 117 19 171 291 k 06 0 598 0 0 C 07 0 0 598 0 G 08 0 0 597 1 G 09 0 139 0 459 T 10 8 18 535 37 G 11 111 70 378 39 g 12 198 171 63 166 h 13 110 54 319 115 g 14 181 78 246 93 r XX BS 57528; BS 57529; BS 57530; BS 57531; BS 57532; BS 57533; BS 57534; BS 57535; BS 57536; BS 57537; BS 57538; BS 57539; BS 57540; BS 57541; BS 57542; BS 57543; BS 57544; BS 57545; BS 57546; BS 57233; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G36060:MA1263.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ESE1/MA1264.1/JASPAR XX ID ESE1:MA1264.1:JASPAR XX NA ESE1 XX DE ESE1 XX OS Arabidopsis thaliana XX BF 17239; BF 17742; XX P0 A C G T 01 124 213 47 207 y 02 137 59 277 118 g 03 189 45 327 30 r 04 78 335 2 176 y 05 4 0 587 0 G 06 55 2 534 0 G 07 3 570 0 18 C 08 0 0 591 0 G 09 0 4 587 0 G 10 13 525 0 53 C 11 5 6 503 77 G 12 76 85 423 7 G 13 191 231 43 126 m 14 90 25 402 74 G 15 143 51 318 79 g XX BS 57092; BS 57058; BS 55417; BS 55409; BS 55406; BS 57547; BS 57548; BS 57549; BS 57550; BS 57551; BS 57552; BS 57553; BS 57554; BS 57100; BS 55420; BS 55404; BS 55421; BS 55424; BS 55418; BS 55405; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ESE1:MA1264.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G31060/MA1265.1/JASPAR XX ID AT4G31060:MA1265.1:JASPAR XX NA AT4G31060 XX DE AT4G31060 XX OS Arabidopsis thaliana XX BF 12357; XX P0 A C G T 01 37 362 56 138 c 02 10 562 0 21 C 03 494 0 93 6 A 04 0 593 0 0 C 05 0 593 0 0 C 06 0 0 593 0 G 07 387 103 5 98 a 08 0 593 0 0 C 09 427 7 122 37 A 10 221 197 75 100 m 11 222 173 34 164 h 12 203 61 147 182 w 13 137 217 83 156 y 14 113 285 38 157 y 15 191 95 175 132 r 16 144 208 95 146 c 17 107 277 78 131 c 18 181 113 170 129 r 19 153 193 100 147 m 20 149 232 82 130 m XX BS 57555; BS 57556; BS 57557; BS 57558; BS 57559; BS 57560; BS 57561; BS 57562; BS 57563; BS 57564; BS 57565; BS 57566; BS 57567; BS 57568; BS 57569; BS 57570; BS 57571; BS 57572; BS 57573; BS 57574; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G31060:MA1265.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15319480 RL Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP211/MA1266.1/JASPAR XX ID RAP211:MA1266.1:JASPAR XX NA RAP211 XX DE RAP211 XX OS Arabidopsis thaliana XX BF 5602; XX P0 A C G T 01 106 270 110 102 c 02 106 236 75 171 y 03 131 82 212 163 k 04 69 248 39 232 y 05 86 342 41 119 c 06 163 42 220 163 d 07 15 323 42 208 y 08 61 373 71 83 c 09 25 0 539 24 G 10 0 588 0 0 C 11 0 588 0 0 C 12 0 0 588 0 G 13 0 112 329 147 k 14 0 560 0 28 C 15 102 132 193 161 k XX BS 57575; BS 57576; BS 57577; BS 57578; BS 57579; BS 57580; BS 57581; BS 57582; BS 57583; BS 57584; BS 57585; BS 57586; BS 57587; BS 57588; BS 57589; BS 57590; BS 57591; BS 57592; BS 57593; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP211:MA1266.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9756931 RL Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G66940/MA1267.1/JASPAR XX ID AT5G66940:MA1267.1:JASPAR XX NA AT5G66940 XX DE AT5G66940 XX OS Arabidopsis thaliana XX BF 12317; XX P0 A C G T 01 151 116 72 258 w 02 138 137 62 260 t 03 132 95 93 277 t 04 91 132 49 325 t 05 105 142 42 308 t 06 84 104 41 368 t 07 102 114 33 348 t 08 146 119 37 295 t 09 134 149 62 252 t 10 107 184 32 274 y 11 64 139 26 368 t 12 89 39 32 437 T 13 72 44 35 446 T 14 20 116 25 436 T 15 113 105 27 352 t 16 290 79 107 121 a 17 1 585 10 1 C 18 1 21 1 574 T 19 0 0 0 597 T 20 0 1 0 596 T 21 105 22 1 469 T 22 57 78 86 376 t 23 122 138 120 217 t 24 141 142 103 211 t 25 133 108 61 295 t 26 124 119 69 285 t 27 108 107 81 301 t 28 147 104 54 292 t 29 182 82 50 283 w XX BS 57594; BS 57595; BS 57596; BS 57597; BS 57598; BS 57599; BS 57600; BS 57601; BS 57602; BS 57603; BS 57604; BS 57605; BS 57606; BS 57607; BS 57608; BS 57609; BS 57610; BS 57611; BS 57612; BS 57613; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G66940:MA1267.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G69570/MA1268.1/JASPAR XX ID AT1G69570:MA1268.1:JASPAR XX NA AT1G69570 XX DE AT1G69570 XX OS Arabidopsis thaliana XX BF 12270; XX P0 A C G T 01 131 120 57 288 t 02 138 85 62 311 t 03 91 51 82 372 t 04 75 42 113 366 t 05 68 263 22 243 y 06 348 72 81 95 a 07 0 596 0 0 C 08 0 24 0 572 T 09 0 4 0 592 T 10 0 0 0 596 T 11 89 21 8 478 T 12 80 103 60 353 t 13 98 250 59 189 y 14 80 151 30 335 y 15 65 80 21 430 T 16 66 62 25 443 T 17 84 60 34 418 T 18 97 109 36 354 t 19 78 142 60 316 t 20 114 110 51 321 t 21 73 100 68 355 t 22 80 82 56 378 t 23 99 76 52 369 t 24 121 99 59 317 t 25 114 89 81 312 t 26 134 98 73 291 t 27 153 122 48 273 w XX BS 57614; BS 57615; BS 57616; BS 57617; BS 57618; BS 57619; BS 57620; BS 57621; BS 57622; BS 57623; BS 57624; BS 57625; BS 57626; BS 57627; BS 57628; BS 57629; BS 57630; BS 57631; BS 57632; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G69570:MA1268.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC dof4.5/MA1269.1/JASPAR XX ID dof4.5:MA1269.1:JASPAR XX NA dof4.5 XX DE dof4.5 XX OS Arabidopsis thaliana XX BF 12393; XX P0 A C G T 01 182 108 194 116 r 02 402 72 47 79 a 03 349 7 27 217 w 04 600 0 0 0 A 05 600 0 0 0 A 06 600 0 0 0 A 07 0 0 600 0 G 08 104 125 57 314 t 09 282 15 135 168 w 10 235 54 233 78 r 11 139 361 45 55 c 12 91 48 33 428 T 13 67 31 45 457 T 14 65 51 24 460 T XX BS 57633; BS 57634; BS 57635; BS 57636; BS 57637; BS 57638; BS 57639; BS 57640; BS 57641; BS 57642; BS 57643; BS 57644; BS 57645; BS 57646; BS 57647; BS 57648; BS 57649; BS 57650; BS 57651; BS 57652; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=dof4.5:MA1269.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G45610/MA1270.1/JASPAR XX ID AT3G45610:MA1270.1:JASPAR XX NA AT3G45610 XX DE AT3G45610 XX OS Arabidopsis thaliana XX BF 11001; XX P0 A C G T 01 101 78 143 278 t 02 75 151 51 323 y 03 177 111 27 285 w 04 319 138 85 58 a 05 0 600 0 0 C 06 0 0 0 600 T 07 0 0 1 599 T 08 0 0 0 600 T 09 135 0 0 465 T 10 39 55 10 496 T 11 129 175 176 120 s 12 129 211 107 153 y 13 87 189 57 267 y 14 83 98 56 363 t 15 89 55 59 397 t 16 104 120 48 328 t 17 126 92 55 327 t 18 132 92 88 288 t 19 77 134 115 274 t XX BS 57653; BS 57654; BS 57655; BS 57656; BS 57657; BS 57658; BS 57659; BS 57660; BS 57661; BS 57662; BS 57663; BS 57664; BS 57665; BS 57666; BS 57667; BS 57668; BS 57669; BS 57670; BS 57671; BS 57672; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G45610:MA1270.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DAG2/MA1271.1/JASPAR XX ID DAG2:MA1271.1:JASPAR XX NA DAG2 XX DE DAG2 XX OS Arabidopsis thaliana XX BF 12119; XX P0 A C G T 01 123 188 175 114 s 02 492 31 51 26 A 03 471 0 0 129 A 04 600 0 0 0 A 05 600 0 0 0 A 06 597 0 3 0 A 07 0 0 600 0 G 08 13 37 185 365 k 09 206 45 152 197 d 10 390 10 156 44 r 11 329 97 49 125 a XX BS 57673; BS 57674; BS 57675; BS 57676; BS 57677; BS 57678; BS 57679; BS 57680; BS 57681; BS 57682; BS 57683; BS 57684; BS 57685; BS 57686; BS 57687; BS 57688; BS 57689; BS 57690; BS 57691; BS 57692; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DAG2:MA1271.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G28810/MA1272.1/JASPAR XX ID AT2G28810:MA1272.1:JASPAR XX NA AT2G28810 XX DE AT2G28810 XX OS Arabidopsis thaliana XX BF 12279; XX P0 A C G T 01 104 112 70 314 t 02 105 129 61 305 t 03 119 174 50 257 y 04 87 128 35 350 t 05 97 113 39 351 t 06 100 103 39 358 t 07 116 124 72 288 t 08 113 110 60 317 t 09 85 127 43 345 t 10 110 66 58 366 t 11 83 66 62 389 t 12 30 132 19 419 T 13 192 95 42 271 w 14 270 110 128 92 a 15 0 600 0 0 C 16 0 0 0 600 T 17 0 0 0 600 T 18 0 0 0 600 T 19 130 15 0 455 T 20 59 45 66 430 T 21 89 157 151 203 b XX BS 57693; BS 57694; BS 57695; BS 57696; BS 57697; BS 57698; BS 57699; BS 57700; BS 57701; BS 57702; BS 57703; BS 57704; BS 57705; BS 57706; BS 57707; BS 57708; BS 57709; BS 57710; BS 57711; BS 57712; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G28810:MA1272.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC dof4.2/MA1273.1/JASPAR XX ID dof4.2:MA1273.1:JASPAR XX NA dof4.2 XX DE dof4.2 XX OS Arabidopsis thaliana XX BF 12391; XX P0 A C G T 01 288 70 106 134 a 02 281 98 96 123 a 03 303 73 108 114 a 04 236 75 145 142 a 05 214 110 166 108 r 06 477 38 48 35 A 07 580 0 0 18 A 08 598 0 0 0 A 09 598 0 0 0 A 10 598 0 0 0 A 11 0 0 598 0 G 12 112 0 463 23 G 13 89 253 28 228 y 14 346 60 70 122 a 15 390 38 72 98 a 16 353 66 50 129 a 17 303 44 105 146 a 18 285 75 119 119 a 19 265 94 120 119 a XX BS 57713; BS 57714; BS 57715; BS 57716; BS 57717; BS 57718; BS 57719; BS 57720; BS 57721; BS 57722; BS 57723; BS 57724; BS 57725; BS 57726; BS 57727; BS 57728; BS 57729; BS 57730; BS 57731; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=dof4.2:MA1273.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OBP3/MA1274.1/JASPAR XX ID OBP3:MA1274.1:JASPAR XX NA OBP3 XX DE OBP3 XX OS Arabidopsis thaliana XX BF 17522; BF 17749; XX P0 A C G T 01 57 103 91 349 t 02 60 103 2 435 T 03 131 92 42 335 t 04 293 67 72 168 w 05 1 555 2 42 C 06 1 23 0 576 T 07 0 12 0 588 T 08 1 1 0 598 T 09 86 21 2 491 T 10 72 101 35 392 t 11 137 155 85 223 y 12 147 150 32 271 y 13 63 162 53 322 y 14 62 98 35 405 t 15 62 86 4 448 T 16 63 125 1 411 T 17 98 59 52 391 t 18 79 124 61 336 t 19 64 110 66 360 t 20 115 104 44 337 t 21 122 84 60 334 t XX BS 57732; BS 57733; BS 57734; BS 57735; BS 57736; BS 57737; BS 57738; BS 57739; BS 57740; BS 57741; BS 57742; BS 57743; BS 57744; BS 57745; BS 57746; BS 57747; BS 57748; BS 57749; BS 57750; BS 57751; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OBP3:MA1274.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G47655/MA1275.1/JASPAR XX ID AT1G47655:MA1275.1:JASPAR XX NA AT1G47655 XX DE AT1G47655 XX OS Arabidopsis thaliana XX BF 12267; XX P0 A C G T 01 158 144 154 144 r 02 132 158 204 106 s 03 343 84 88 85 a 04 332 2 3 263 w 05 600 0 0 0 A 06 600 0 0 0 A 07 544 0 56 0 A 08 0 0 600 0 G 09 0 86 23 491 T 10 342 1 227 30 r 11 298 45 155 102 r XX BS 57752; BS 57753; BS 57754; BS 57755; BS 57756; BS 57757; BS 57758; BS 57759; BS 57760; BS 57761; BS 57762; BS 57763; BS 57764; BS 57765; BS 57766; BS 57767; BS 57768; BS 57769; BS 57770; BS 57771; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G47655:MA1275.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G52440/MA1276.1/JASPAR XX ID AT3G52440:MA1276.1:JASPAR XX NA AT3G52440 XX DE AT3G52440 XX OS Arabidopsis thaliana XX BF 12295; XX P0 A C G T 01 107 206 187 99 s 02 467 4 103 25 A 03 348 0 0 251 w 04 599 0 0 0 A 05 599 0 0 0 A 06 599 0 0 0 A 07 0 0 599 0 G 08 2 6 219 372 k 09 169 31 198 201 d 10 348 48 136 67 a 11 276 131 67 125 a XX BS 57772; BS 57773; BS 57774; BS 57675; BS 57775; BS 57776; BS 57777; BS 57692; BS 57778; BS 57779; BS 57780; BS 57781; BS 57782; BS 57783; BS 57784; BS 57785; BS 57673; BS 57682; BS 57786; BS 57787; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G52440:MA1276.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Adof1/MA1277.1/JASPAR XX ID Adof1:MA1277.1:JASPAR XX NA Adof1 XX DE Adof1 XX OS Arabidopsis thaliana XX BF 12218; XX P0 A C G T 01 277 94 97 127 a 02 311 71 106 107 a 03 331 50 117 97 a 04 316 76 106 97 a 05 274 68 122 131 a 06 164 139 202 90 r 07 388 48 108 51 a 08 466 0 3 126 A 09 595 0 0 0 A 10 595 0 0 0 A 11 575 0 20 0 A 12 0 0 595 0 G 13 96 113 94 292 t 14 371 18 90 116 a 15 342 26 177 50 r 16 381 52 83 79 a 17 326 69 66 134 a 18 293 51 135 116 a 19 288 87 131 89 a 20 266 78 95 156 w 21 273 62 151 109 r XX BS 57788; BS 57789; BS 57790; BS 57791; BS 57792; BS 57793; BS 57794; BS 57795; BS 57796; BS 57797; BS 57798; BS 57799; BS 57800; BS 57801; BS 57802; BS 57803; BS 57804; BS 57805; BS 57806; BS 57807; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Adof1:MA1277.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OBP1/MA1278.1/JASPAR XX ID OBP1:MA1278.1:JASPAR XX NA OBP1 XX DE OBP1 XX OS Arabidopsis thaliana XX BF 12498; XX P0 A C G T 01 145 136 80 239 t 02 130 137 104 229 t 03 92 169 82 257 y 04 111 194 57 238 y 05 80 153 42 325 y 06 81 107 62 350 t 07 87 164 34 315 y 08 102 135 74 289 t 09 106 119 62 313 t 10 91 142 51 316 t 11 113 67 70 350 t 12 67 83 69 381 t 13 47 169 17 367 y 14 161 93 43 303 w 15 204 146 157 93 r 16 0 600 0 0 C 17 0 14 0 586 T 18 0 7 0 593 T 19 0 0 0 600 T 20 145 29 0 426 T 21 59 105 104 332 t XX BS 57808; BS 57805; BS 57809; BS 57810; BS 57811; BS 57812; BS 57813; BS 57814; BS 57815; BS 57816; BS 57817; BS 57818; BS 57819; BS 57820; BS 57821; BS 57822; BS 57823; BS 57824; BS 57825; BS 57826; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OBP1:MA1278.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC COG1/MA1279.1/JASPAR XX ID COG1:MA1279.1:JASPAR XX NA COG1 XX DE COG1 XX OS Arabidopsis thaliana XX BF 10997; XX P0 A C G T 01 257 82 140 121 a 02 259 86 118 137 a 03 333 60 105 102 a 04 318 62 101 119 a 05 329 75 121 75 a 06 329 55 114 102 a 07 301 61 143 95 a 08 251 73 147 129 a 09 184 94 199 123 r 10 440 34 71 55 A 11 486 8 1 105 A 12 599 1 0 0 A 13 599 0 1 0 A 14 591 0 9 0 A 15 0 0 600 0 G 16 46 35 140 379 t 17 232 22 273 73 r 18 325 122 41 112 a 19 400 81 38 81 a 20 340 71 54 135 a 21 308 63 119 110 a XX BS 57827; BS 57828; BS 57829; BS 57830; BS 57831; BS 55322; BS 57832; BS 57833; BS 57834; BS 57835; BS 57836; BS 57837; BS 57838; BS 57839; BS 55309; BS 57840; BS 57841; BS 57842; BS 55311; BS 57843; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=COG1:MA1279.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OBP4/MA1280.1/JASPAR XX ID OBP4:MA1280.1:JASPAR XX NA OBP4 XX DE OBP4 XX OS Arabidopsis thaliana XX BF 11006; XX P0 A C G T 01 142 194 174 90 s 02 529 17 34 20 A 03 456 0 3 141 A 04 599 0 0 1 A 05 600 0 0 0 A 06 600 0 0 0 A 07 0 0 600 0 G 08 22 37 209 332 k 09 193 23 127 257 w 10 387 32 131 50 a 11 303 102 80 115 a 12 293 77 52 178 w 13 262 96 76 166 w 14 273 87 55 185 w XX BS 57844; BS 57845; BS 57846; BS 57847; BS 57848; BS 57849; BS 57850; BS 57851; BS 57852; BS 57853; BS 57854; BS 57855; BS 57856; BS 57857; BS 57858; BS 57859; BS 57860; BS 57861; BS 57862; BS 57863; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OBP4:MA1280.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G02460/MA1281.1/JASPAR XX ID AT5G02460:MA1281.1:JASPAR XX NA AT5G02460 XX DE AT5G02460 XX OS Arabidopsis thaliana XX BF 12305; XX P0 A C G T 01 217 86 116 96 a 02 355 25 90 45 A 03 412 4 13 86 A 04 512 0 1 2 A 05 505 0 0 10 A 06 464 2 49 0 A 07 2 0 511 2 G 08 150 93 82 190 w 09 306 16 71 122 a 10 369 0 104 42 A 11 354 76 58 27 A 12 320 39 99 57 a 13 328 20 80 87 a 14 225 37 149 104 r 15 261 61 96 97 a 16 329 16 103 67 a 17 349 0 73 93 a 18 345 45 104 21 a 19 260 27 110 118 a 20 275 59 140 41 r 21 263 39 119 94 a XX BS 57864; BS 57865; BS 57866; BS 57867; BS 57868; BS 57869; BS 57870; BS 57711; BS 57697; BS 57871; BS 57872; BS 57694; BS 57873; BS 57874; BS 57875; BS 57876; BS 57703; BS 57709; BS 57693; BS 57877; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G02460:MA1281.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10758479 RL Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PTF1/MA1282.1/JASPAR XX ID PTF1:MA1282.1:JASPAR XX NA PTF1 XX DE PTF1 XX OS Arabidopsis thaliana XX BF 12502; XX P0 A C G T 01 17 9 96 8 G 02 6 11 7 106 T 03 11 9 97 13 G 04 0 0 129 1 G 05 0 0 130 0 G 06 0 0 130 0 G 07 99 21 0 10 A 08 0 129 0 1 C 09 0 130 0 0 C 10 120 0 10 0 A 11 0 117 6 7 C 12 57 16 12 45 w 13 50 10 27 43 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PTF1:MA1282.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12000681 RL Kosugi S., Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family.. Plant J. 30:337-348 (2002). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP14/MA1283.1/JASPAR XX ID TCP14:MA1283.1:JASPAR XX NA TCP14 XX DE TCP14 XX OS Arabidopsis thaliana XX BF 12519; XX P0 A C G T 01 31 5 5 6 a 02 13 16 13 5 v 03 40 0 4 3 A 04 14 2 18 13 d 05 36 2 4 5 A 06 5 5 28 9 g 07 10 14 18 5 s 08 22 2 12 11 r 09 2 10 16 19 k 10 0 0 47 0 G 11 0 0 0 47 T 12 2 0 45 0 G 13 0 0 47 0 G 14 0 0 47 0 G 15 19 0 18 10 r 16 0 47 0 0 C 17 0 47 0 0 C 18 0 47 0 0 C 19 43 0 4 0 A 20 0 47 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP14:MA1283.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP1/MA1284.1/JASPAR XX ID TCP1:MA1284.1:JASPAR XX NA TCP1 XX DE TCP1 XX OS Arabidopsis thaliana XX BF 12518; XX P0 A C G T 01 36 7 16 36 w 02 4 7 84 0 G 03 0 6 5 84 T 04 0 0 95 0 G 05 0 0 95 0 G 06 0 0 95 0 G 07 8 54 8 25 y 08 0 94 1 0 C 09 0 95 0 0 C 10 9 82 0 4 C 11 52 26 8 9 m 12 15 61 2 17 c 13 16 34 22 23 c 14 13 22 12 48 t 15 21 37 15 22 c 16 20 34 10 31 y 17 16 28 8 43 y 18 23 43 11 18 c 19 25 18 12 40 w 20 16 31 25 23 s 21 22 22 17 34 t 22 23 26 11 35 y 23 15 13 36 31 k 24 20 11 40 24 k 25 15 15 36 29 k 26 28 36 10 21 m 27 19 37 15 24 y 28 22 27 18 28 y 29 36 19 21 19 a 30 12 35 8 40 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP1:MA1284.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g45680/MA1285.1/JASPAR XX ID At2g45680:MA1285.1:JASPAR XX NA At2g45680 XX DE At2g45680 XX OS Arabidopsis thaliana XX BF 12347; XX P0 A C G T 01 77 192 60 66 c 02 85 205 57 48 c 03 195 79 51 70 a 04 65 89 49 192 t 05 50 55 78 212 t 06 103 58 42 192 w 07 65 92 151 87 g 08 92 170 30 103 y 09 89 166 34 106 y 10 46 13 332 4 G 11 1 19 1 374 T 12 16 0 379 0 G 13 1 0 394 0 G 14 24 0 370 1 G 15 53 97 23 222 t 16 0 388 0 7 C 17 2 393 0 0 C 18 1 371 1 22 C 19 356 1 38 0 A 20 2 346 11 36 C 21 104 178 36 77 m XX BS 57878; BS 57879; BS 57880; BS 57881; BS 57882; BS 57883; BS 57884; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g45680:MA1285.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP24/MA1286.1/JASPAR XX ID TCP24:MA1286.1:JASPAR XX NA TCP24 XX DE TCP24 XX OS Arabidopsis thaliana XX BF 11748; XX P0 A C G T 01 153 81 214 146 r 02 113 108 94 279 t 03 74 100 196 224 k 04 12 11 553 18 G 05 0 0 593 1 G 06 0 0 594 0 G 07 527 24 26 17 A 08 0 594 0 0 C 09 0 594 0 0 C 10 567 0 27 0 A 11 16 560 9 9 C 12 195 192 40 167 h XX BS 57885; BS 57886; BS 57887; BS 57888; BS 57889; BS 57890; BS 57891; BS 57892; BS 57893; BS 57894; BS 57895; BS 57896; BS 57897; BS 57898; BS 57899; BS 57900; BS 57901; BS 57902; BS 57903; BS 57904; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP24:MA1286.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g08330/MA1287.1/JASPAR XX ID At5g08330:MA1287.1:JASPAR XX NA At5g08330 XX DE At5g08330 XX OS Arabidopsis thaliana XX BF 12360; XX P0 A C G T 01 188 77 99 234 w 02 35 5 558 0 G 03 0 20 0 578 T 04 0 0 598 0 G 05 0 0 598 0 G 06 54 1 520 23 G 07 154 289 33 122 m 08 0 597 0 1 C 09 15 582 0 1 C 10 62 415 14 107 C 11 424 37 88 49 A 12 58 338 65 137 c 13 153 150 118 177 h 14 161 104 96 237 w XX BS 57905; BS 57906; BS 57907; BS 57908; BS 57909; BS 57910; BS 57911; BS 57912; BS 57913; BS 57914; BS 57915; BS 57916; BS 57917; BS 57918; BS 57919; BS 57920; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g08330:MA1287.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g72010/MA1288.1/JASPAR XX ID At1g72010:MA1288.1:JASPAR XX NA At1g72010 XX DE At1g72010 XX OS Arabidopsis thaliana XX BF 12336; XX P0 A C G T 01 227 93 109 166 w 02 165 87 112 231 w 03 12 2 581 0 G 04 0 25 0 570 T 05 1 0 594 0 G 06 0 0 595 0 G 07 57 3 513 22 G 08 172 227 58 138 m 09 0 595 0 0 C 10 1 594 0 0 C 11 45 439 9 102 C 12 441 25 87 42 A 13 51 321 70 153 y XX BS 55590; BS 57921; BS 57922; BS 55577; BS 57923; BS 55582; BS 57924; BS 57925; BS 55580; BS 55581; BS 55589; BS 57926; BS 55588; BS 57927; BS 57928; BS 57929; BS 57930; BS 57931; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g72010:MA1288.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP3/MA1289.1/JASPAR XX ID TCP3:MA1289.1:JASPAR XX NA TCP3 XX DE TCP3 XX OS Arabidopsis thaliana XX BF 11749; XX P0 A C G T 01 165 69 209 139 r 02 122 95 77 288 t 03 58 89 185 250 k 04 2 2 563 15 G 05 0 0 582 0 G 06 0 0 582 0 G 07 503 51 0 28 A 08 0 582 0 0 C 09 0 582 0 0 C 10 544 0 38 0 A 11 1 561 6 14 C 12 215 154 51 162 h 13 196 74 104 208 w XX BS 57932; BS 57933; BS 57934; BS 57935; BS 57936; BS 57937; BS 57938; BS 57939; BS 57940; BS 57941; BS 57942; BS 57943; BS 57944; BS 57945; BS 57946; BS 57947; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP3:MA1289.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12000681 RL Kosugi S., Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family.. Plant J. 30:337-348 (2002). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP17/MA1290.1/JASPAR XX ID TCP17:MA1290.1:JASPAR XX NA TCP17 XX DE TCP17 XX OS Arabidopsis thaliana XX BF 12520; XX P0 A C G T 01 8 6 92 2 G 02 2 5 0 101 T 03 0 2 105 1 G 04 0 0 106 2 G 05 3 0 20 85 T 06 1 107 0 0 C 07 0 108 0 0 C 08 1 106 1 0 C 09 17 80 5 6 C 10 90 6 6 6 A 11 9 77 9 13 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP17:MA1290.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12000681 RL Kosugi S., Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family.. Plant J. 30:337-348 (2002). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP7/MA1291.1/JASPAR XX ID TCP7:MA1291.1:JASPAR XX NA TCP7 XX DE TCP7 XX OS Arabidopsis thaliana XX BF 12521; XX P0 A C G T 01 1 0 587 0 G 02 0 15 0 573 T 03 68 0 520 0 G 04 0 0 588 0 G 05 4 1 583 0 G 06 228 92 162 106 r 07 22 514 0 52 C 08 2 586 0 0 C 09 25 556 4 3 C 10 451 30 75 32 A 11 42 321 66 159 y XX BS 57948; BS 57949; BS 57950; BS 57951; BS 57952; BS 57953; BS 57954; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP7:MA1291.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21241251 RL Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB27/MA1292.1/JASPAR XX ID MYB27:MA1292.1:JASPAR XX NA MYB27 XX DE MYB27 XX OS Arabidopsis thaliana XX BF 12460; XX P0 A C G T 01 278 80 109 129 a 02 357 55 77 107 a 03 385 19 71 121 a 04 469 0 6 121 A 05 495 0 2 99 A 06 412 0 178 6 R 07 0 0 1 595 T 08 0 0 0 596 T 09 595 0 0 1 A 10 0 0 596 0 G 11 0 0 596 0 G 12 0 5 0 591 T 13 512 48 25 11 A 14 277 66 103 150 w 15 315 55 139 87 a XX BS 57955; BS 57956; BS 57957; BS 57958; BS 57959; BS 57960; BS 57961; BS 57962; BS 57963; BS 57964; BS 57965; BS 57966; BS 57967; BS 57968; BS 57969; BS 57970; BS 57971; BS 57972; BS 57973; BS 57974; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB27:MA1292.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB57/MA1293.1/JASPAR XX ID MYB57:MA1293.1:JASPAR XX NA MYB57 XX DE MYB57 XX OS Arabidopsis thaliana XX BF 12472; XX P0 A C G T 01 76 199 53 269 y 02 109 151 81 256 y 03 0 20 22 555 T 04 500 0 97 0 A 05 0 597 0 0 C 06 0 597 0 0 C 07 2 0 0 595 T 08 597 0 0 0 A 09 597 0 0 0 A 10 1 483 0 113 C 11 44 57 0 496 T 12 95 127 20 355 t 13 133 108 56 300 t 14 171 88 67 271 w XX BS 57975; BS 57976; BS 57977; BS 57978; BS 57979; BS 57980; BS 57981; BS 57982; BS 57983; BS 57984; BS 57985; BS 57986; BS 57987; BS 57988; BS 57989; BS 57990; BS 57991; BS 57992; BS 57993; BS 57994; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB57:MA1293.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB62/MA1294.1/JASPAR XX ID MYB62:MA1294.1:JASPAR XX NA MYB62 XX DE MYB62 XX OS Arabidopsis thaliana XX BF 12476; XX P0 A C G T 01 198 60 96 86 a 02 170 88 74 108 a 03 204 48 76 112 w 04 213 66 61 100 a 05 227 23 60 130 w 06 299 12 58 71 a 07 112 32 263 33 r 08 0 0 5 435 T 09 0 0 0 440 T 10 411 0 0 29 A 11 0 0 440 0 G 12 0 0 440 0 G 13 5 188 5 242 y 14 228 47 71 94 a 15 130 66 134 110 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB62:MA1294.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY20/MA1295.1/JASPAR XX ID WRKY20:MA1295.1:JASPAR XX NA WRKY20 XX DE WRKY20 XX OS Arabidopsis thaliana XX BF 12543; XX P0 A C G T 01 235 55 157 153 d 02 162 151 156 131 v 03 34 418 74 74 C 04 11 3 420 166 K 05 2 1 0 597 T 06 0 1 0 599 T 07 0 0 600 0 G 08 599 0 1 0 A 09 1 599 0 0 C 10 0 270 0 330 y 11 231 38 108 223 w 12 160 40 136 264 w 13 156 68 127 249 w XX BS 57995; BS 57996; BS 57997; BS 57998; BS 57999; BS 58000; BS 58001; BS 58002; BS 58003; BS 58004; BS 55734; BS 58005; BS 58006; BS 58007; BS 58008; BS 58009; BS 58010; BS 58011; BS 58012; BS 58013; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY20:MA1295.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY46/MA1296.1/JASPAR XX ID WRKY46:MA1296.1:JASPAR XX NA WRKY46 XX DE WRKY46 XX OS Arabidopsis thaliana XX BF 12550; XX P0 A C G T 01 2 19 1 0 C 02 0 0 16 6 K 03 0 0 0 22 T 04 0 0 0 22 T 05 0 0 22 0 G 06 18 0 4 0 A 07 0 22 0 0 C 08 0 3 0 19 T 09 0 3 1 18 T 10 3 4 0 15 T 11 1 4 9 8 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY46:MA1296.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY26/MA1297.1/JASPAR XX ID WRKY26:MA1297.1:JASPAR XX NA WRKY26 XX DE WRKY26 XX OS Arabidopsis thaliana XX BF 12545; XX P0 A C G T 01 53 16 9 6 a 02 55 7 5 17 a 03 56 11 3 14 a 04 71 0 13 0 A 05 0 0 84 0 G 06 0 2 1 81 T 07 0 84 0 0 C 08 84 0 0 0 A 09 84 0 0 0 A 10 13 71 0 0 C 11 15 5 59 5 G 12 21 22 24 17 v 13 18 22 5 39 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY26:MA1297.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY29/MA1298.1/JASPAR XX ID WRKY29:MA1298.1:JASPAR XX NA WRKY29 XX DE WRKY29 XX OS Arabidopsis thaliana XX BF 11825; XX P0 A C G T 01 315 114 65 100 a 02 403 42 60 89 a 03 438 15 38 103 A 04 496 0 81 17 A 05 0 0 594 0 G 06 0 1 0 593 T 07 0 594 0 0 C 08 593 1 0 0 A 09 588 0 6 0 A 10 132 439 0 23 C 11 67 64 274 189 k XX BS 55635; BS 55685; BS 55639; BS 55634; BS 55693; BS 55640; BS 55683; BS 55642; BS 58014; BS 55627; BS 55628; BS 58015; BS 55631; BS 55641; BS 58016; BS 55626; BS 55643; BS 58017; BS 58018; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY29:MA1298.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY17/MA1299.1/JASPAR XX ID WRKY17:MA1299.1:JASPAR XX NA WRKY17 XX DE WRKY17 XX OS Arabidopsis thaliana XX BF 11816; XX P0 A C G T 01 57 25 23 22 a 02 67 24 14 22 a 03 94 9 18 6 A 04 117 0 6 4 A 05 125 0 1 1 A 06 0 0 127 0 G 07 0 5 1 121 T 08 0 127 0 0 C 09 125 0 2 0 A 10 127 0 0 0 A 11 20 97 8 2 C 12 29 9 78 11 g 13 32 38 32 25 v 14 28 42 16 41 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY17:MA1299.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY6/MA1300.1/JASPAR XX ID WRKY6:MA1300.1:JASPAR XX NA WRKY6 XX DE WRKY6 XX OS Arabidopsis thaliana XX BF 12554; XX P0 A C G T 01 41 195 21 28 C 02 1 0 262 22 G 03 0 0 0 285 T 04 0 0 0 285 T 05 0 0 285 0 G 06 285 0 0 0 A 07 0 285 0 0 C 08 0 85 0 200 Y 09 77 38 37 133 w 10 74 23 43 145 w 11 58 41 89 97 k 12 68 29 84 104 k 13 59 77 19 130 y 14 75 42 44 124 w 15 101 23 82 79 d 16 110 41 49 85 w 17 63 81 65 76 y 18 87 79 39 80 h 19 78 84 34 89 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY6:MA1300.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY33/MA1301.1/JASPAR XX ID WRKY33:MA1301.1:JASPAR XX NA WRKY33 XX DE WRKY33 XX OS Arabidopsis thaliana XX BF 11820; XX P0 A C G T 01 296 145 49 108 a 02 380 83 35 100 a 03 372 48 28 150 w 04 476 0 122 0 A 05 0 0 598 0 G 06 0 0 0 598 T 07 0 598 0 0 C 08 598 0 0 0 A 09 598 0 0 0 A 10 184 400 0 14 m 11 98 67 350 83 g XX BS 58019; BS 55637; BS 58020; BS 55632; BS 55688; BS 55690; BS 55630; BS 55643; BS 55693; BS 58021; BS 55628; BS 55684; BS 55685; BS 58022; BS 58023; BS 55689; BS 55633; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY33:MA1301.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY65/MA1302.1/JASPAR XX ID WRKY65:MA1302.1:JASPAR XX NA WRKY65 XX DE WRKY65 XX OS Arabidopsis thaliana XX BF 12555; XX P0 A C G T 01 257 122 99 122 a 02 380 43 84 93 a 03 418 25 34 123 A 04 458 6 127 9 A 05 0 0 600 0 G 06 0 1 0 599 T 07 0 600 0 0 C 08 600 0 0 0 A 09 599 0 0 1 A 10 36 542 0 22 C 11 50 38 419 93 G XX BS 55675; BS 55634; BS 58024; BS 58025; BS 55652; BS 55639; BS 58026; BS 58027; BS 58016; BS 55671; BS 55629; BS 58020; BS 55654; BS 58017; BS 55691; BS 58028; BS 55628; BS 58029; BS 58030; BS 58031; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY65:MA1302.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY22/MA1303.1/JASPAR XX ID WRKY22:MA1303.1:JASPAR XX NA WRKY22 XX DE WRKY22 XX OS Arabidopsis thaliana XX BF 11823; XX P0 A C G T 01 318 116 78 87 a 02 461 29 50 59 A 03 518 5 14 62 A 04 532 0 58 9 A 05 0 0 599 0 G 06 0 0 0 599 T 07 0 599 0 0 C 08 599 0 0 0 A 09 599 0 0 0 A 10 71 508 0 20 C 11 54 60 314 171 k 12 182 140 128 149 a 13 140 135 67 257 t XX BS 58032; BS 58033; BS 58034; BS 58035; BS 58036; BS 58037; BS 58038; BS 55745; BS 58039; BS 55748; BS 58040; BS 58041; BS 55749; BS 58000; BS 55746; BS 55747; BS 58042; BS 58043; BS 58044; BS 58045; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY22:MA1303.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY59/MA1304.1/JASPAR XX ID WRKY59:MA1304.1:JASPAR XX NA WRKY59 XX DE WRKY59 XX OS Arabidopsis thaliana XX BF 12553; XX P0 A C G T 01 56 48 26 43 m 02 109 12 25 27 a 03 97 15 16 45 w 04 103 18 8 44 w 05 130 0 39 4 A 06 0 0 173 0 G 07 0 2 0 171 T 08 0 173 0 0 C 09 173 0 0 0 A 10 173 0 0 0 A 11 93 62 6 12 m 12 46 38 58 31 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY59:MA1304.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY55/MA1305.1/JASPAR XX ID WRKY55:MA1305.1:JASPAR XX NA WRKY55 XX DE WRKY55 XX OS Arabidopsis thaliana XX BF 12552; XX P0 A C G T 01 188 73 186 152 d 02 141 148 167 143 g 03 71 415 59 54 C 04 31 2 543 23 G 05 0 0 0 599 T 06 0 0 0 599 T 07 0 0 599 0 G 08 599 0 0 0 A 09 0 599 0 0 C 10 0 128 1 470 T 11 90 72 48 389 t 12 126 65 103 305 t XX BS 58046; BS 58047; BS 58048; BS 58049; BS 58050; BS 58051; BS 58052; BS 58053; BS 58054; BS 58055; BS 58056; BS 58057; BS 58058; BS 58059; BS 58060; BS 58061; BS 58062; BS 58063; BS 58064; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY55:MA1305.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY11/MA1306.1/JASPAR XX ID WRKY11:MA1306.1:JASPAR XX NA WRKY11 XX DE WRKY11 XX OS Arabidopsis thaliana XX BF 12542; XX P0 A C G T 01 227 67 173 130 r 02 149 109 178 161 k 03 107 358 84 48 c 04 11 0 512 74 G 05 0 1 0 596 T 06 1 0 0 596 T 07 0 0 597 0 G 08 595 0 2 0 A 09 0 597 0 0 C 10 16 47 0 534 T 11 59 20 8 510 T 12 56 42 37 462 T 13 102 70 93 332 t 14 144 85 139 229 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY11:MA1306.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY31/MA1307.1/JASPAR XX ID WRKY31:MA1307.1:JASPAR XX NA WRKY31 XX DE WRKY31 XX OS Arabidopsis thaliana XX BF 12548; XX P0 A C G T 01 68 33 77 73 d 02 59 32 82 78 k 03 72 56 63 60 r 04 76 46 45 84 w 05 86 58 27 80 w 06 109 35 33 74 w 07 108 33 73 37 r 08 90 64 35 62 m 09 86 74 38 53 m 10 124 32 35 60 a 11 131 28 39 53 a 12 188 0 63 0 R 13 0 0 251 0 G 14 0 0 0 251 T 15 1 250 0 0 C 16 251 0 0 0 A 17 251 0 0 0 A 18 7 244 0 0 C 19 30 17 169 35 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY31:MA1307.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY70/MA1308.1/JASPAR XX ID WRKY70:MA1308.1:JASPAR XX NA WRKY70 XX DE WRKY70 XX OS Arabidopsis thaliana XX BF 12557; XX P0 A C G T 01 210 77 168 144 r 02 123 165 181 130 s 03 75 464 32 28 C 04 14 0 584 1 G 05 0 0 0 599 T 06 0 0 0 599 T 07 0 0 599 0 G 08 599 0 0 0 A 09 0 599 0 0 C 10 2 58 3 536 T 11 71 24 11 493 T 12 82 45 37 435 T 13 99 73 118 309 t XX BS 55745; BS 58065; BS 58066; BS 58067; BS 55734; BS 55747; BS 58068; BS 58000; BS 58069; BS 58070; BS 58071; BS 58072; BS 58032; BS 58073; BS 58074; BS 58075; BS 58076; BS 58077; BS 58045; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY70:MA1308.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY3/MA1309.1/JASPAR XX ID WRKY3:MA1309.1:JASPAR XX NA WRKY3 XX DE WRKY3 XX OS Arabidopsis thaliana XX BF 12547; XX P0 A C G T 01 325 132 63 78 a 02 404 75 34 85 a 03 386 62 26 124 a 04 467 0 131 0 A 05 0 0 598 0 G 06 0 0 0 598 T 07 0 597 0 1 C 08 598 0 0 0 A 09 598 0 0 0 A 10 180 398 1 19 m 11 106 69 347 76 g XX BS 55683; BS 58078; BS 58079; BS 58080; BS 55631; BS 55637; BS 58022; BS 55688; BS 55691; BS 55638; BS 55673; BS 55678; BS 55634; BS 58081; BS 58028; BS 55654; BS 55640; BS 55674; BS 58019; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY3:MA1309.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY42/MA1310.1/JASPAR XX ID WRKY42:MA1310.1:JASPAR XX NA WRKY42 XX DE WRKY42 XX OS Arabidopsis thaliana XX BF 12549; XX P0 A C G T 01 55 73 70 111 t 02 71 45 58 135 t 03 64 34 68 143 t 04 75 41 92 101 k 05 125 72 55 57 a 06 118 92 30 69 m 07 81 88 39 101 h 08 75 79 49 106 y 09 96 51 93 69 r 10 67 69 89 84 k 11 51 184 28 46 c 12 1 0 301 7 G 13 0 0 0 309 T 14 0 0 0 309 T 15 0 0 307 2 G 16 309 0 0 0 A 17 0 309 0 0 C 18 6 90 7 206 y 19 97 38 37 137 w 20 82 45 38 144 w 21 63 48 92 106 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY42:MA1310.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY28/MA1311.1/JASPAR XX ID WRKY28:MA1311.1:JASPAR XX NA WRKY28 XX DE WRKY28 XX OS Arabidopsis thaliana XX BF 12546; XX P0 A C G T 01 212 56 160 170 d 02 156 96 131 215 w 03 107 271 85 135 c 04 56 15 357 170 k 05 0 6 0 592 T 06 0 0 2 596 T 07 0 0 598 0 G 08 598 0 0 0 A 09 0 598 0 0 C 10 15 99 6 478 T 11 113 34 29 422 T 12 87 56 65 390 t 13 103 72 127 296 t XX BS 55747; BS 58082; BS 58038; BS 58044; BS 58083; BS 58084; BS 58085; BS 58086; BS 58087; BS 58088; BS 58089; BS 55751; BS 58090; BS 55749; BS 55748; BS 55750; BS 55745; BS 58091; BS 55735; BS 58092; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY28:MA1311.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY47/MA1312.1/JASPAR XX ID WRKY47:MA1312.1:JASPAR XX NA WRKY47 XX DE WRKY47 XX OS Arabidopsis thaliana XX BF 11824; XX P0 A C G T 01 46 26 8 8 m 02 14 38 5 31 y 03 7 41 17 23 y 04 13 7 45 23 k 05 25 17 28 18 r 06 6 80 2 0 C 07 2 0 65 21 G 08 0 0 1 87 T 09 5 0 0 83 T 10 0 0 88 0 G 11 74 0 13 1 A 12 0 88 0 0 C 13 1 33 1 53 y 14 34 13 3 38 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY47:MA1312.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY7/MA1313.1/JASPAR XX ID WRKY7:MA1313.1:JASPAR XX NA WRKY7 XX DE WRKY7 XX OS Arabidopsis thaliana XX BF 12556; XX P0 A C G T 01 220 79 160 135 r 02 121 116 179 178 k 03 114 395 55 30 c 04 3 0 552 39 G 05 0 0 0 594 T 06 0 0 0 594 T 07 0 0 593 1 G 08 587 0 7 0 A 09 0 593 0 1 C 10 3 13 0 578 T 11 12 3 0 579 T 12 26 25 4 539 T 13 61 70 81 382 t 14 129 78 118 269 t XX BS 58093; BS 58094; BS 58095; BS 58096; BS 58097; BS 58098; BS 58099; BS 58100; BS 58101; BS 58102; BS 58103; BS 58104; BS 58105; BS 58106; BS 58107; BS 58108; BS 58109; BS 58110; BS 58111; BS 58112; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY7:MA1313.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY14/MA1314.1/JASPAR XX ID WRKY14:MA1314.1:JASPAR XX NA WRKY14 XX DE WRKY14 XX OS Arabidopsis thaliana XX BF 11811; XX P0 A C G T 01 286 128 78 106 a 02 426 38 51 83 A 03 454 22 24 98 A 04 509 1 84 4 A 05 0 0 598 0 G 06 0 0 0 598 T 07 0 598 0 0 C 08 598 0 0 0 A 09 598 0 0 0 A 10 36 549 0 13 C 11 53 54 397 94 g 12 168 165 142 123 m 13 144 157 76 221 y XX BS 58067; BS 58113; BS 55745; BS 55746; BS 57999; BS 58114; BS 58000; BS 58003; BS 58115; BS 58041; BS 55747; BS 58116; BS 58070; BS 58032; BS 55734; BS 58117; BS 58071; BS 58077; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY14:MA1314.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY24/MA1315.1/JASPAR XX ID WRKY24:MA1315.1:JASPAR XX NA WRKY24 XX DE WRKY24 XX OS Arabidopsis thaliana XX BF 12544; XX P0 A C G T 01 112 130 158 200 k 02 42 423 50 85 C 03 21 2 525 52 G 04 0 0 0 600 T 05 2 0 0 598 T 06 0 0 600 0 G 07 599 0 1 0 A 08 1 599 0 0 C 09 0 114 0 486 T 10 133 29 27 411 T 11 101 36 36 427 T 12 111 79 78 332 t 13 123 102 103 272 t 14 143 116 101 240 t XX BS 58118; BS 58119; BS 58120; BS 58121; BS 58122; BS 58123; BS 58124; BS 58125; BS 58126; BS 58127; BS 58128; BS 58129; BS 58130; BS 58131; BS 58132; BS 58133; BS 58134; BS 58135; BS 58136; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY24:MA1315.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY71/MA1316.1/JASPAR XX ID WRKY71:MA1316.1:JASPAR XX NA WRKY71 XX DE WRKY71 XX OS Arabidopsis thaliana XX BF 12558; XX P0 A C G T 01 349 103 69 77 a 02 475 32 36 55 A 03 510 13 20 55 A 04 552 2 40 4 A 05 0 0 598 0 G 06 0 0 0 598 T 07 0 598 0 0 C 08 598 0 0 0 A 09 598 0 0 0 A 10 157 408 4 29 M 11 128 82 294 94 g XX BS 58137; BS 55630; BS 58138; BS 58018; BS 55645; BS 58139; BS 58140; BS 58141; BS 55689; BS 58081; BS 55685; BS 55686; BS 55632; BS 55671; BS 58023; BS 55687; BS 58020; BS 58027; BS 58142; BS 58143; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY71:MA1316.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY50/MA1317.1/JASPAR XX ID WRKY50:MA1317.1:JASPAR XX NA WRKY50 XX DE WRKY50 XX OS Arabidopsis thaliana XX BF 12551; XX P0 A C G T 01 104 213 88 163 y 02 57 56 216 239 k 03 6 1 2 559 T 04 3 0 0 565 T 05 0 0 568 0 G 06 567 0 1 0 A 07 0 568 0 0 C 08 2 22 1 543 T 09 43 10 4 511 T 10 29 23 14 502 T 11 51 63 48 406 T 12 116 88 90 274 t 13 142 124 87 215 w XX BS 58144; BS 58145; BS 58146; BS 58147; BS 58148; BS 58149; BS 58150; BS 58151; BS 58152; BS 58153; BS 58154; BS 58155; BS 58156; BS 58157; BS 58158; BS 58159; BS 58160; BS 58161; BS 58162; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY50:MA1317.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY27/MA1318.1/JASPAR XX ID WRKY27:MA1318.1:JASPAR XX NA WRKY27 XX DE WRKY27 XX OS Arabidopsis thaliana XX BF 11832; XX P0 A C G T 01 278 65 129 128 a 02 133 125 167 175 k 03 171 345 48 36 m 04 3 1 554 42 G 05 0 0 0 600 T 06 0 0 0 600 T 07 0 0 600 0 G 08 595 0 3 2 A 09 0 600 0 0 C 10 6 20 0 574 T 11 46 10 2 542 T 12 43 34 2 521 T 13 70 64 89 377 t XX BS 58163; BS 58164; BS 58068; BS 58069; BS 58075; BS 58003; BS 57999; BS 58115; BS 58067; BS 55746; BS 58071; BS 58041; BS 58165; BS 58032; BS 58070; BS 58117; BS 58113; BS 58166; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY27:MA1318.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL3/MA1319.1/JASPAR XX ID SPL3:MA1319.1:JASPAR XX NA SPL3 XX DE SPL3 XX OS Arabidopsis thaliana XX BF 7519; XX P0 A C G T 01 26 6 20 106 t 02 0 158 0 0 C 03 0 158 0 0 C 04 0 0 158 0 G 05 0 0 0 158 T 06 158 0 0 0 A 07 0 158 0 0 C 08 68 29 33 28 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL3:MA1319.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL15/MA1320.1/JASPAR XX ID SPL15:MA1320.1:JASPAR XX NA SPL15 XX DE SPL15 XX OS Arabidopsis thaliana XX BF 12514; XX P0 A C G T 01 91 30 62 63 d 02 111 33 43 59 a 03 128 29 28 61 a 04 39 58 33 116 t 05 5 45 16 180 T 06 5 0 241 0 G 07 0 0 0 246 T 08 246 0 0 0 A 09 0 246 0 0 C 10 0 0 244 2 G 11 0 0 241 5 G 12 219 4 3 20 A 13 69 106 18 53 m 14 94 44 66 42 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL15:MA1320.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL13/MA1321.1/JASPAR XX ID SPL13:MA1321.1:JASPAR XX NA SPL13 XX DE SPL13 XX OS Arabidopsis thaliana XX BF 12513; XX P0 A C G T 01 262 64 96 156 w 02 122 118 90 248 t 03 50 95 65 368 t 04 0 0 578 0 G 05 0 0 0 578 T 06 578 0 0 0 A 07 0 578 0 0 C 08 2 19 460 97 G 09 79 0 438 61 G 10 346 71 10 151 w 11 174 163 59 182 h XX BS 58167; BS 58168; BS 58169; BS 58170; BS 58171; BS 58172; BS 58173; BS 58174; BS 58175; BS 58176; BS 58177; BS 58178; BS 58179; BS 58180; BS 58181; BS 58182; BS 58183; BS 58184; BS 58185; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL13:MA1321.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL9/MA1322.1/JASPAR XX ID SPL9:MA1322.1:JASPAR XX NA SPL9 XX DE SPL9 XX OS Arabidopsis thaliana XX BF 12515; XX P0 A C G T 01 236 131 110 123 a 02 160 104 92 244 w 03 22 117 80 381 t 04 0 0 600 0 G 05 1 0 0 599 T 06 597 3 0 0 A 07 0 600 0 0 C 08 1 28 310 261 k 09 89 18 283 210 k 10 247 90 69 194 w 11 140 161 66 233 y XX BS 58186; BS 58187; BS 58188; BS 58189; BS 58190; BS 58191; BS 58192; BS 58193; BS 58194; BS 58195; BS 58196; BS 58183; BS 58197; BS 58198; BS 58199; BS 58200; BS 58201; BS 58202; BS 58203; BS 58204; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL9:MA1322.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 16554053 RL Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA19/MA1323.1/JASPAR XX ID GATA19:MA1323.1:JASPAR XX NA GATA19 XX DE GATA19 XX OS Arabidopsis thaliana XX BF 12409; XX P0 A C G T 01 22 101 27 52 y 02 56 54 51 41 v 03 10 2 190 0 G 04 202 0 0 0 A 05 0 0 0 202 T 06 2 197 3 0 C 07 1 55 89 57 b 08 21 1 180 0 G 09 159 7 27 9 A 10 33 1 6 162 T 11 6 81 13 102 y XX BS 58205; BS 58206; BS 58207; BS 58208; BS 58209; BS 58210; BS 58211; BS 58212; BS 58213; BS 58214; BS 58215; BS 58216; BS 58217; BS 58218; BS 58219; BS 58220; BS 58221; BS 58222; BS 58223; BS 58224; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA19:MA1323.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA20/MA1324.1/JASPAR XX ID GATA20:MA1324.1:JASPAR XX NA GATA20 XX DE GATA20 XX OS Arabidopsis thaliana XX BF 12410; XX P0 A C G T 01 70 0 1 5 A 02 0 8 0 68 T 03 2 70 0 4 C 04 13 25 38 0 s 05 0 0 76 0 G 06 76 0 0 0 A 07 0 0 0 76 T 08 2 73 0 1 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA20:MA1324.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA14/MA1325.1/JASPAR XX ID GATA14:MA1325.1:JASPAR XX NA GATA14 XX DE GATA14 XX OS Arabidopsis thaliana XX BF 12407; XX P0 A C G T 01 81 101 89 280 t 02 100 119 133 199 t 03 81 87 42 341 t 04 497 4 26 24 A 05 0 1 550 0 G 06 551 0 0 0 A 07 0 2 0 549 T 08 4 547 0 0 C 09 2 97 31 421 T 10 202 46 296 7 r 11 189 70 127 165 w 12 106 55 70 320 t 13 71 112 83 285 t 14 86 124 97 244 t 15 99 125 119 208 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA14:MA1325.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 12504119 RL Jeong MJ, Shih MC. Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. Biochem Biophys Res Commun 300:555-62 (2003). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB33/MA1326.1/JASPAR XX ID ATHB33:MA1326.1:JASPAR XX NA ATHB33 XX DE ATHB33 XX OS Arabidopsis thaliana XX BF 12326; XX P0 A C G T 01 206 122 140 132 a 02 116 217 105 162 y 03 165 19 371 45 r 04 0 22 2 576 T 05 316 90 194 0 r 06 591 3 6 0 A 07 0 0 0 600 T 08 0 0 0 600 T 09 599 0 0 1 A 10 335 19 237 9 r 11 51 170 138 241 y XX BS 58225; BS 58226; BS 58227; BS 58228; BS 58229; BS 58230; BS 58231; BS 58232; BS 58233; BS 58234; BS 58235; BS 58236; BS 58237; BS 58238; BS 58239; BS 58240; BS 58241; BS 58242; BS 58243; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB33:MA1326.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB23/MA1327.1/JASPAR XX ID ATHB23:MA1327.1:JASPAR XX NA ATHB23 XX DE ATHB23 XX OS Arabidopsis thaliana XX BF 12323; XX P0 A C G T 01 364 22 33 180 w 02 318 43 52 186 w 03 201 64 94 240 w 04 164 167 117 151 h 05 183 89 105 222 w 06 26 16 13 544 T 07 455 1 143 0 A 08 593 0 0 6 A 09 0 0 0 599 T 10 0 0 0 599 T 11 599 0 0 0 A 12 423 19 155 2 R 13 73 101 123 302 t 14 157 62 146 234 w 15 300 46 124 129 a 16 227 104 89 179 w 17 156 71 78 294 w 18 252 37 67 243 w 19 373 21 71 134 a 20 294 44 50 211 w 21 165 32 31 371 w 22 235 33 47 284 w XX BS 58244; BS 58245; BS 58246; BS 58247; BS 58248; BS 58249; BS 58250; BS 58251; BS 58252; BS 58253; BS 58254; BS 58255; BS 58256; BS 58257; BS 58258; BS 58259; BS 58260; BS 58261; BS 58262; BS 58263; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB23:MA1327.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB34/MA1328.1/JASPAR XX ID ATHB34:MA1328.1:JASPAR XX NA ATHB34 XX DE ATHB34 XX OS Arabidopsis thaliana XX BF 14247; BF 12327; XX P0 A C G T 01 241 11 11 337 w 02 152 45 17 386 w 03 226 52 4 318 w 04 332 92 66 110 a 05 221 76 102 201 w 06 138 137 55 270 t 07 174 182 93 151 h 08 242 175 127 56 m 09 15 225 19 341 y 10 4 1 0 595 T 11 600 0 0 0 A 12 599 0 1 0 A 13 4 9 0 587 T 14 0 222 6 372 y 15 539 13 32 16 A XX BS 58264; BS 58265; BS 58266; BS 58267; BS 58268; BS 58269; BS 58270; BS 58271; BS 58272; BS 58273; BS 58274; BS 58275; BS 58276; BS 58277; BS 58278; BS 58279; BS 58280; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB34:MA1328.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB25/MA1329.1/JASPAR XX ID ATHB25:MA1329.1:JASPAR XX NA ATHB25 XX DE ATHB25 XX OS Arabidopsis thaliana XX BF 12325; XX P0 A C G T 01 148 109 43 300 t 02 213 183 73 131 m 03 320 115 132 33 a 04 9 259 8 324 y 05 0 0 0 600 T 06 600 0 0 0 A 07 600 0 0 0 A 08 0 6 3 591 T 09 0 166 28 406 y 10 581 8 9 2 A 11 206 168 44 182 h 12 122 145 211 122 g 13 187 136 58 219 w 14 157 77 53 313 w 15 178 64 57 301 w XX BS 58281; BS 58282; BS 58283; BS 58284; BS 58285; BS 58286; BS 58287; BS 58288; BS 58289; BS 58290; BS 58291; BS 58292; BS 58293; BS 58294; BS 58295; BS 58296; BS 58297; BS 58298; BS 58299; BS 58300; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB25:MA1329.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB24/MA1330.1/JASPAR XX ID ATHB24:MA1330.1:JASPAR XX NA ATHB24 XX DE ATHB24 XX OS Arabidopsis thaliana XX BF 12324; XX P0 A C G T 01 368 45 29 158 w 02 357 63 54 126 a 03 260 76 88 176 w 04 179 153 76 192 h 05 217 35 242 106 r 06 12 13 2 573 T 07 411 14 175 0 R 08 585 0 13 2 A 09 0 0 0 600 T 10 0 0 0 600 T 11 598 0 2 0 A 12 394 7 192 7 r 13 75 108 142 275 t 14 167 73 160 200 d 15 286 53 95 166 w XX BS 58292; BS 58301; BS 58302; BS 58303; BS 58290; BS 58304; BS 58305; BS 58281; BS 58306; BS 58307; BS 58308; BS 58309; BS 58310; BS 58298; BS 58299; BS 58311; BS 58312; BS 58313; BS 58314; BS 58295; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB24:MA1330.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G78700/MA1331.1/JASPAR XX ID AT1G78700:MA1331.1:JASPAR XX NA AT1G78700 XX DE AT1G78700 XX OS Arabidopsis thaliana XX BF 12340; XX P0 A C G T 01 0 324 4 270 y 02 157 1 440 0 R 03 0 598 0 0 C 04 598 0 0 0 A 05 0 598 0 0 C 06 0 0 598 0 G 07 2 0 0 596 T 08 0 0 598 0 G 09 13 132 65 388 t 10 91 88 365 54 g 11 191 119 195 93 r XX BS 58315; BS 58316; BS 58317; BS 58318; BS 58319; BS 58320; BS 58321; BS 58322; BS 58323; BS 58324; BS 58325; BS 58326; BS 58327; BS 58328; BS 58329; BS 58330; BS 58331; BS 58332; BS 58333; BS 58334; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G78700:MA1331.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15681342 RL He J. X., Gendron J. M., Sun Y., Gampala S. S., Gendron N., Sun C. Q., Wang Z. Y. BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responses.. Science 307:1634-1638 (2005). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G36780/MA1332.1/JASPAR XX ID AT4G36780:MA1332.1:JASPAR XX NA AT4G36780 XX DE AT4G36780 XX OS Arabidopsis thaliana XX BF 14415; BF 17752; XX P0 A C G T 01 83 184 103 229 y 02 36 414 66 83 C 03 406 72 106 15 a 04 0 599 0 0 C 05 598 0 0 1 A 06 0 599 0 0 C 07 0 0 599 0 G 08 0 0 0 599 T 09 0 0 599 0 G 10 0 407 1 191 y 11 234 0 365 0 r XX BS 58316; BS 58324; BS 58322; BS 58321; BS 58323; BS 58330; BS 58329; BS 58319; BS 58335; BS 58334; BS 58336; BS 58337; BS 58327; BS 58332; BS 58326; BS 58333; BS 58315; BS 58320; BS 58328; BS 58331; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G36780:MA1332.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15681342 RL He J. X., Gendron J. M., Sun Y., Gampala S. S., Gendron N., Sun C. Q., Wang Z. Y. BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responses.. Science 307:1634-1638 (2005). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G18890/MA1333.1/JASPAR XX ID AT4G18890:MA1333.1:JASPAR XX NA AT4G18890 XX DE AT4G18890 XX OS Arabidopsis thaliana XX BF 12355; XX P0 A C G T 01 3 319 43 225 y 02 179 28 383 0 r 03 0 589 0 1 C 04 590 0 0 0 A 05 0 590 0 0 C 06 1 0 589 0 G 07 1 0 0 589 T 08 0 0 590 0 G 09 51 74 60 405 T 10 60 140 338 52 g 11 239 91 179 81 r XX BS 58319; BS 58320; BS 58338; BS 58339; BS 58340; BS 58323; BS 58332; BS 58341; BS 58328; BS 58317; BS 58342; BS 58334; BS 58331; BS 58326; BS 58343; BS 58344; BS 58345; BS 58346; BS 58347; BS 58327; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G18890:MA1333.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15681342 RL He J. X., Gendron J. M., Sun Y., Gampala S. S., Gendron N., Sun C. Q., Wang Z. Y. BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responses.. Science 307:1634-1638 (2005). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF6/MA1334.1/JASPAR XX ID GBF6:MA1334.1:JASPAR XX NA GBF6 XX DE GBF6 XX OS Arabidopsis thaliana XX BF 12413; XX P0 A C G T 01 73 79 105 334 t 02 16 14 418 143 G 03 142 428 0 21 C 04 0 572 19 0 C 05 591 0 0 0 A 06 0 588 2 1 C 07 3 2 586 0 G 08 0 0 0 591 T 09 43 534 14 0 C 10 571 0 19 1 A 11 2 46 373 170 k 12 67 501 3 20 C 13 344 60 38 149 w 14 191 96 72 232 w 15 169 182 68 172 h XX BS 58348; BS 58349; BS 58350; BS 58351; BS 58352; BS 58353; BS 58354; BS 58355; BS 58356; BS 58357; BS 58358; BS 58359; BS 58360; BS 58361; BS 58362; BS 58363; BS 58364; BS 58365; BS 58366; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF6:MA1334.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA4/MA1335.1/JASPAR XX ID TGA4:MA1335.1:JASPAR XX NA TGA4 XX DE TGA4 XX OS Arabidopsis thaliana XX BF 10646; XX P0 A C G T 01 44 123 0 433 T 02 22 117 398 63 g 03 566 3 5 26 A 04 0 581 0 19 C 05 71 2 527 0 G 06 0 2 0 598 T 07 42 558 0 0 C 08 599 1 0 0 A 09 0 89 195 316 k 10 18 500 37 45 C 11 342 62 111 85 a XX BS 58367; BS 58368; BS 58369; BS 58370; BS 58371; BS 58372; BS 58373; BS 58374; BS 58375; BS 58376; BS 58377; BS 58378; BS 58379; BS 58380; BS 58381; BS 58382; BS 58383; BS 58384; BS 58385; BS 58386; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA4:MA1335.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA3/MA1336.1/JASPAR XX ID TGA3:MA1336.1:JASPAR XX NA TGA3 XX DE TGA3 XX OS Arabidopsis thaliana XX BF 2887; XX P0 A C G T 01 182 69 189 158 d 02 290 61 232 15 r 03 3 3 0 592 T 04 0 6 583 9 G 05 598 0 0 0 A 06 0 577 0 21 C 07 26 1 571 0 G 08 0 1 0 597 T 09 71 527 0 0 C 10 593 0 1 4 A 11 0 83 215 300 k 12 39 447 51 61 C 13 306 52 104 136 a 14 156 67 87 288 w XX BS 55541; BS 55536; BS 55531; BS 55529; BS 55544; BS 55533; BS 55538; BS 55530; BS 55543; BS 55540; BS 55535; BS 55537; BS 55528; BS 55539; BS 55542; BS 55534; BS 55546; BS 55532; BS 55545; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA3:MA1336.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP44/MA1337.1/JASPAR XX ID bZIP44:MA1337.1:JASPAR XX NA bZIP44 XX DE bZIP44 XX OS Arabidopsis thaliana XX BF 12578; XX P0 A C G T 01 156 66 161 145 d 02 210 51 103 164 w 03 143 37 65 283 w 04 32 5 423 68 G 05 153 320 54 1 m 06 3 24 1 500 T 07 0 0 479 49 G 08 528 0 0 0 A 09 0 520 0 8 C 10 4 1 523 0 G 11 2 1 0 525 T 12 0 0 528 0 G 13 0 0 425 103 G 14 124 397 1 6 C 15 328 79 71 50 a XX BS 58387; BS 58352; BS 58354; BS 58351; BS 58388; BS 58389; BS 58355; BS 58353; BS 58366; BS 58349; BS 58348; BS 58350; BS 58358; BS 58361; BS 58363; BS 58360; BS 58362; BS 58364; BS 58365; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP44:MA1337.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AREB3/MA1338.1/JASPAR XX ID AREB3:MA1338.1:JASPAR XX NA AREB3 XX DE AREB3 XX OS Arabidopsis thaliana XX BF 12251; XX P0 A C G T 01 246 43 149 160 w 02 225 52 142 179 w 03 200 40 98 260 w 04 77 35 351 135 g 05 142 74 358 24 g 06 259 93 0 246 w 07 1 349 236 12 s 08 598 0 0 0 A 09 0 598 0 0 C 10 0 0 598 0 G 11 0 0 0 598 T 12 0 0 598 0 G 13 0 0 422 176 K 14 14 584 0 0 C 15 460 37 76 25 A XX BS 58390; BS 58391; BS 58392; BS 58393; BS 58394; BS 58395; BS 58396; BS 58397; BS 58398; BS 58399; BS 58400; BS 58401; BS 58402; BS 58403; BS 58404; BS 58405; BS 58406; BS 58407; BS 58408; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AREB3:MA1338.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 10636868 RL Choi H., Hong J., Ha J., Kang J., Kim S. Y. ABFs, a family of ABA-responsive element binding factors. J. Biol. Chem. 275:1723-1730 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP43/MA1339.1/JASPAR XX ID bZIP43:MA1339.1:JASPAR XX NA bZIP43 XX DE bZIP43 XX OS Arabidopsis thaliana XX BF 12577; XX P0 A C G T 01 0 0 19 9 k 02 3 25 0 0 C 03 0 28 0 0 C 04 28 0 0 0 A 05 0 27 0 1 C 06 0 0 28 0 G 07 0 0 0 28 T 08 0 27 1 0 C 09 27 0 0 1 A 10 0 0 24 4 G 11 3 25 0 0 C 12 18 3 1 6 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP43:MA1339.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP3/MA1340.1/JASPAR XX ID bZIP3:MA1340.1:JASPAR XX NA bZIP3 XX DE bZIP3 XX OS Arabidopsis thaliana XX BF 12575; XX P0 A C G T 01 176 69 182 147 d 02 199 95 109 171 w 03 150 55 57 312 w 04 27 10 439 98 G 05 169 307 75 23 m 06 38 56 1 479 T 07 0 70 452 52 G 08 574 0 0 0 A 09 0 566 3 5 C 10 3 8 561 2 G 11 0 0 0 574 T 12 0 0 574 0 G 13 0 3 459 112 G 14 129 431 2 12 C 15 314 78 113 69 a XX BS 58348; BS 58366; BS 58350; BS 58409; BS 58352; BS 58410; BS 58411; BS 58353; BS 58412; BS 58413; BS 58414; BS 58361; BS 58354; BS 58358; BS 58360; BS 58362; BS 58365; BS 58364; BS 58363; BS 58349; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP3:MA1340.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP53/MA1341.1/JASPAR XX ID bZIP53:MA1341.1:JASPAR XX NA bZIP53 XX DE bZIP53 XX OS Arabidopsis thaliana XX BF 12581; XX P0 A C G T 01 178 67 185 168 d 02 241 73 105 179 w 03 152 37 63 346 w 04 20 1 503 74 G 05 159 387 50 2 m 06 0 26 0 572 T 07 0 14 529 55 G 08 598 0 0 0 A 09 0 595 1 2 C 10 1 2 595 0 G 11 0 0 0 598 T 12 0 22 576 0 G 13 24 0 450 124 G 14 138 430 14 16 C 15 348 100 81 69 a XX BS 58348; BS 58415; BS 58389; BS 58351; BS 58352; BS 58354; BS 58350; BS 58366; BS 58349; BS 58353; BS 58362; BS 58355; BS 58358; BS 58360; BS 58361; BS 58364; BS 58363; BS 58365; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP53:MA1341.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP50/MA1342.1/JASPAR XX ID bZIP50:MA1342.1:JASPAR XX NA bZIP50 XX DE bZIP50 XX OS Arabidopsis thaliana XX BF 10637; XX P0 A C G T 01 112 124 84 277 t 02 60 60 408 69 G 03 296 231 70 0 m 04 5 1 0 591 T 05 0 0 518 79 G 06 597 0 0 0 A 07 0 572 0 25 C 08 16 1 580 0 G 09 0 0 0 597 T 10 4 585 8 0 C 11 590 0 5 2 A 12 15 239 64 279 y 13 129 228 56 184 y 14 189 119 90 199 w 15 139 116 110 232 t 16 131 165 62 239 y 17 104 190 90 213 y XX BS 58416; BS 58417; BS 58418; BS 58419; BS 58420; BS 58421; BS 58422; BS 58423; BS 58424; BS 58425; BS 58426; BS 58427; BS 58428; BS 58429; BS 58430; BS 58431; BS 58432; BS 58433; BS 58434; BS 58435; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP50:MA1342.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP52/MA1343.1/JASPAR XX ID bZIP52:MA1343.1:JASPAR XX NA bZIP52 XX DE bZIP52 XX OS Arabidopsis thaliana XX BF 12580; XX P0 A C G T 01 207 68 109 215 w 02 51 68 46 434 T 03 0 0 548 51 G 04 309 290 0 0 m 05 0 599 0 0 C 06 599 0 0 0 A 07 1 0 598 0 G 08 3 479 85 32 C 09 0 198 4 397 y 10 61 78 242 218 k 11 116 0 332 151 k 12 98 118 139 244 t 13 187 204 65 143 m 14 247 102 76 174 w XX BS 58436; BS 58437; BS 58438; BS 58439; BS 58440; BS 58441; BS 58442; BS 58443; BS 58444; BS 58445; BS 58446; BS 58447; BS 58448; BS 58449; BS 58450; BS 58451; BS 58452; BS 58453; BS 58454; BS 58455; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP52:MA1343.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP28/MA1344.1/JASPAR XX ID bZIP28:MA1344.1:JASPAR XX NA bZIP28 XX DE bZIP28 XX OS Arabidopsis thaliana XX BF 12574; XX P0 A C G T 01 177 65 147 159 d 02 172 108 103 165 w 03 138 90 91 229 w 04 125 39 254 130 g 05 249 69 174 56 r 06 127 79 3 339 t 07 1 181 315 51 s 08 546 0 2 0 A 09 0 544 0 4 C 10 4 0 544 0 G 11 0 0 0 548 T 12 6 0 542 0 G 13 0 0 407 141 K 14 89 431 1 27 C 15 302 42 118 86 a XX BS 58456; BS 58394; BS 58399; BS 58457; BS 58458; BS 58459; BS 58460; BS 58461; BS 58462; BS 58463; BS 58464; BS 58465; BS 58411; BS 58413; BS 58466; BS 58412; BS 58467; BS 58468; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP28:MA1344.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP48/MA1345.1/JASPAR XX ID bZIP48:MA1345.1:JASPAR XX NA bZIP48 XX DE bZIP48 XX OS Arabidopsis thaliana XX BF 12579; XX P0 A C G T 01 7 4 328 114 K 02 84 369 0 0 C 03 0 452 0 1 C 04 453 0 0 0 A 05 1 449 0 3 C 06 4 1 448 0 G 07 0 1 0 452 T 08 36 417 0 0 C 09 433 0 16 4 A 10 5 24 319 105 G 11 53 384 3 13 C 12 279 34 33 107 a 13 130 77 72 174 w 14 122 145 46 140 h XX BS 58469; BS 58470; BS 58471; BS 58472; BS 58473; BS 58474; BS 58475; BS 58476; BS 58477; BS 58478; BS 58479; BS 58480; BS 58481; BS 58482; BS 58483; BS 58484; BS 58485; BS 58486; BS 58487; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP48:MA1345.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA10/MA1346.1/JASPAR XX ID TGA10:MA1346.1:JASPAR XX NA TGA10 XX DE TGA10 XX OS Arabidopsis thaliana XX BF 12524; XX P0 A C G T 01 193 72 216 112 r 02 256 90 107 140 a 03 118 122 54 299 t 04 45 53 473 22 G 05 316 200 77 0 m 06 0 0 0 593 T 07 4 0 550 39 G 08 590 0 3 0 A 09 0 559 1 33 C 10 6 0 587 0 G 11 12 5 1 575 T 12 34 505 48 6 C 13 524 0 48 21 A 14 34 258 98 203 y 15 135 184 83 191 y XX BS 54750; BS 54758; BS 55622; BS 54756; BS 55623; BS 54744; BS 54755; BS 58488; BS 58489; BS 58490; BS 54751; BS 54739; BS 54743; BS 54742; BS 54740; BS 54754; BS 54752; BS 55621; BS 54757; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA10:MA1346.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP68/MA1347.1/JASPAR XX ID bZIP68:MA1347.1:JASPAR XX NA bZIP68 XX DE bZIP68 XX OS Arabidopsis thaliana XX BF 10635; XX P0 A C G T 01 51 126 42 381 t 02 2 0 502 96 G 03 106 493 1 0 C 04 0 598 0 2 C 05 600 0 0 0 A 06 1 589 4 6 C 07 2 4 594 0 G 08 0 0 1 599 T 09 58 306 234 2 s 10 327 1 143 129 a 11 93 161 212 134 s 12 154 344 28 74 m 13 285 76 68 171 w 14 171 122 82 225 w 15 157 191 66 186 h XX BS 58348; BS 58456; BS 58394; BS 58491; BS 58468; BS 58492; BS 58413; BS 58412; BS 58349; BS 58366; BS 58388; BS 58358; BS 58414; BS 58362; BS 58364; BS 58360; BS 58363; BS 58354; BS 58351; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP68:MA1347.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA9/MA1348.1/JASPAR XX ID TGA9:MA1348.1:JASPAR XX NA TGA9 XX DE TGA9 XX OS Arabidopsis thaliana XX BF 12526; XX P0 A C G T 01 51 51 481 9 G 02 318 198 76 0 m 03 8 0 1 583 T 04 0 0 526 66 G 05 591 0 1 0 A 06 0 548 0 44 C 07 11 0 581 0 G 08 1 0 0 591 T 09 16 552 24 0 C 10 567 0 25 0 A 11 13 239 76 264 y XX BS 58493; BS 58494; BS 58495; BS 58496; BS 58497; BS 58498; BS 58499; BS 58500; BS 58501; BS 58502; BS 58503; BS 58504; BS 58505; BS 58506; BS 58507; BS 58508; BS 58509; BS 58510; BS 58511; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA9:MA1348.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP16/MA1349.1/JASPAR XX ID bZIP16:MA1349.1:JASPAR XX NA bZIP16 XX DE bZIP16 XX OS Arabidopsis thaliana XX BF 12573; XX P0 A C G T 01 205 70 160 159 d 02 227 52 116 199 w 03 182 60 75 277 w 04 52 28 334 180 k 05 97 174 254 69 s 06 145 170 0 279 y 07 0 302 265 27 s 08 594 0 0 0 A 09 0 586 7 1 C 10 0 7 587 0 G 11 0 0 0 594 T 12 0 0 594 0 G 13 0 0 529 65 G 14 33 561 0 0 C 15 464 22 94 14 A XX BS 58512; BS 58513; BS 58514; BS 58515; BS 58516; BS 58348; BS 58465; BS 58517; BS 58358; BS 58364; BS 58362; BS 58456; BS 58360; BS 58394; BS 58518; BS 58399; BS 58519; BS 58520; BS 58521; BS 58387; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP16:MA1349.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP42/MA1350.1/JASPAR XX ID bZIP42:MA1350.1:JASPAR XX NA bZIP42 XX DE bZIP42 XX OS Arabidopsis thaliana XX BF 12576; XX P0 A C G T 01 13 3 0 51 T 02 1 0 64 2 G 03 9 55 3 0 C 04 0 0 0 67 T 05 0 0 65 2 G 06 67 0 0 0 A 07 0 67 0 0 C 08 1 0 66 0 G 09 1 0 0 66 T 10 0 0 67 0 G 11 0 0 58 9 G 12 18 49 0 0 M XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP42:MA1350.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF3/MA1351.1/JASPAR XX ID GBF3:MA1351.1:JASPAR XX NA GBF3 XX DE GBF3 XX OS Arabidopsis thaliana XX BF 17438; BF 17724; XX P0 A C G T 01 36 92 39 429 T 02 2 1 532 61 G 03 84 512 0 0 C 04 0 596 0 0 C 05 596 0 0 0 A 06 0 593 3 0 C 07 3 2 591 0 G 08 0 0 0 596 T 09 50 374 170 2 s 10 392 0 134 70 a 11 36 166 251 143 s 12 161 394 12 29 m 13 304 72 39 181 w 14 187 114 67 228 w 15 169 169 54 204 h XX BS 58348; BS 58389; BS 58366; BS 58349; BS 58394; BS 58352; BS 58354; BS 58351; BS 58353; BS 58355; BS 58358; BS 58399; BS 58360; BS 58361; BS 58362; BS 58364; BS 58363; BS 58365; BS 58456; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF3:MA1351.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRP1/MA1352.1/JASPAR XX ID TRP1:MA1352.1:JASPAR XX NA TRP1 XX DE TRP1 XX OS Arabidopsis thaliana XX BF 12527; XX P0 A C G T 01 45 0 0 3 A 02 44 0 0 4 A 03 47 0 0 1 A 04 0 44 1 3 C 05 5 39 2 2 C 06 2 36 5 5 C 07 0 0 0 48 T 08 47 0 0 1 A 09 47 0 1 0 A 10 48 0 0 0 A 11 0 43 0 5 C 12 4 43 0 1 C 13 0 47 1 0 C 14 1 0 0 47 T 15 47 0 0 1 A 16 43 2 0 3 A 17 46 0 2 0 A 18 0 43 1 4 C 19 8 39 0 1 C 20 3 45 0 0 C 21 2 1 0 45 T 22 47 0 0 1 A 23 44 0 0 4 A XX BS 58522; BS 58523; BS 58524; BS 58525; BS 58526; BS 58527; BS 58528; BS 58529; BS 58530; BS 58531; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRP1:MA1352.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G72740/MA1353.1/JASPAR XX ID AT1G72740:MA1353.1:JASPAR XX NA AT1G72740 XX DE AT1G72740 XX OS Arabidopsis thaliana XX BF 12272; XX P0 A C G T 01 62 154 23 52 c 02 69 159 34 29 c 03 59 46 51 135 t 04 214 3 22 52 A 05 282 3 2 4 A 06 282 0 9 0 A 07 10 281 0 0 C 08 0 291 0 0 C 09 0 291 0 0 C 10 0 0 0 291 T 11 289 0 1 1 A 12 242 0 49 0 A 13 138 41 2 110 w 14 9 129 16 137 y 15 37 157 27 70 c XX BS 58532; BS 58533; BS 58534; BS 58535; BS 58536; BS 58537; BS 58538; BS 58539; BS 58540; BS 58541; BS 58542; BS 58543; BS 58544; BS 58545; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G72740:MA1353.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G12670/MA1354.1/JASPAR XX ID AT4G12670:MA1354.1:JASPAR XX NA AT4G12670 XX DE AT4G12670 XX OS Arabidopsis thaliana XX BF 12300; XX P0 A C G T 01 0 35 0 7 C 02 3 3 0 36 T 03 41 0 0 1 A 04 41 0 0 1 A 05 39 1 1 1 A 06 0 42 0 0 C 07 4 35 1 2 C 08 0 41 0 1 C 09 1 0 1 40 T 10 38 0 1 3 A 11 40 0 2 0 A 12 39 0 3 0 A 13 1 36 0 5 C 14 0 39 2 1 C 15 6 32 1 3 C 16 1 1 0 40 T 17 42 0 0 0 A 18 34 2 1 5 A 19 36 1 2 3 A 20 2 35 2 3 C 21 7 28 0 7 c 22 0 39 0 3 C 23 8 0 0 34 T 24 38 3 0 1 A 25 40 0 0 2 A 26 40 0 1 1 A 27 5 35 0 2 C 28 0 39 1 2 C 29 0 32 4 6 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G12670:MA1354.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TBP3/MA1355.1/JASPAR XX ID TBP3:MA1355.1:JASPAR XX NA TBP3 XX DE TBP3 XX OS Arabidopsis thaliana XX BF 17518; BF 11471; XX P0 A C G T 01 266 105 68 133 a 02 277 76 68 151 w 03 262 91 58 161 w 04 237 114 47 174 w 05 171 148 43 210 h 06 119 80 76 297 t 07 302 9 86 175 w 08 378 3 1 190 w 09 335 0 237 0 r 10 42 530 0 0 C 11 0 572 0 0 C 12 0 572 0 0 C 13 0 0 0 572 T 14 572 0 0 0 A 15 483 0 87 2 A 16 191 87 12 282 w 17 95 117 25 335 t 18 144 137 59 232 w 19 140 148 88 196 y XX BS 58546; BS 58547; BS 58548; BS 58549; BS 58550; BS 58551; BS 58552; BS 58553; BS 58554; BS 58555; BS 58556; BS 58557; BS 58558; BS 58559; BS 58560; BS 58561; BS 58562; BS 58563; BS 58564; BS 58565; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TBP3:MA1355.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRP2/MA1356.1/JASPAR XX ID TRP2:MA1356.1:JASPAR XX NA TRP2 XX DE TRP2 XX OS Arabidopsis thaliana XX BF 12528; XX P0 A C G T 01 72 0 1 3 A 02 72 0 2 2 A 03 72 0 0 4 A 04 0 66 2 8 C 05 6 63 2 5 C 06 0 65 1 10 C 07 3 1 1 71 T 08 72 0 0 4 A 09 76 0 0 0 A 10 75 0 0 1 A 11 0 75 1 0 C 12 2 74 0 0 C 13 2 71 3 0 C 14 2 0 3 71 T 15 73 0 1 2 A 16 68 6 0 2 A 17 73 0 2 1 A 18 1 69 0 6 C 19 7 62 2 5 C 20 7 61 2 6 C XX BS 58566; BS 58567; BS 58568; BS 58569; BS 58570; BS 58571; BS 58572; BS 58573; BS 58574; BS 58575; BS 58576; BS 58577; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRP2:MA1356.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH80/MA1357.1/JASPAR XX ID bHLH80:MA1357.1:JASPAR XX NA bHLH80 XX DE bHLH80 XX OS Arabidopsis thaliana XX BF 12572; XX P0 A C G T 01 132 38 103 322 t 02 104 18 429 44 G 03 1 594 0 0 C 04 595 0 0 0 A 05 595 0 0 0 A 06 0 0 595 0 G 07 0 0 0 595 T 08 1 0 235 359 k 09 0 0 595 0 G 10 146 277 81 91 c 11 235 140 49 171 w XX BS 58578; BS 58579; BS 58580; BS 58581; BS 58582; BS 58583; BS 58584; BS 58585; BS 58586; BS 58587; BS 58588; BS 58589; BS 58590; BS 58591; BS 58592; BS 58593; BS 58594; BS 58595; BS 58596; BS 58597; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH80:MA1357.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH130/MA1358.1/JASPAR XX ID bHLH130:MA1358.1:JASPAR XX NA bHLH130 XX DE bHLH130 XX OS Arabidopsis thaliana XX BF 17262; BF 17722; XX P0 A C G T 01 65 14 54 52 d 02 31 33 68 53 k 03 0 184 1 0 C 04 98 87 0 0 m 05 185 0 0 0 A 06 1 184 0 0 C 07 1 0 0 184 T 08 4 0 0 181 T 09 0 0 185 0 G 10 18 105 17 45 c 11 79 52 19 35 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH130:MA1358.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH31/MA1359.1/JASPAR XX ID bHLH31:MA1359.1:JASPAR XX NA bHLH31 XX DE bHLH31 XX OS Arabidopsis thaliana XX BF 10513; XX P0 A C G T 01 138 179 215 63 s 02 263 44 54 234 w 03 97 122 204 172 k 04 136 100 230 129 g 05 164 116 83 232 w 06 126 131 231 107 g 07 153 142 194 106 r 08 0 595 0 0 C 09 595 0 0 0 A 10 0 581 0 14 C 11 48 0 547 0 G 12 0 0 0 595 T 13 0 0 595 0 G 14 83 167 180 165 b 15 113 182 163 137 s 16 190 141 94 170 w 17 187 121 97 190 w 18 155 95 87 258 w 19 101 257 146 91 c 20 251 101 83 160 w 21 98 259 115 123 c XX BS 58598; BS 58599; BS 58600; BS 58601; BS 58602; BS 58603; BS 58604; BS 58605; BS 58606; BS 58607; BS 58608; BS 58609; BS 58610; BS 58611; BS 58612; BS 58613; BS 58614; BS 58615; BS 58616; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH31:MA1359.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH74/MA1360.1/JASPAR XX ID bHLH74:MA1360.1:JASPAR XX NA bHLH74 XX DE bHLH74 XX OS Arabidopsis thaliana XX BF 12570; XX P0 A C G T 01 25 103 47 23 c 02 42 18 100 38 g 03 38 30 24 106 t 04 22 40 124 12 g 05 100 23 30 45 a 06 60 32 58 48 r 07 64 23 48 63 w 08 73 37 63 25 r 09 26 49 72 51 k 10 0 193 5 0 C 11 198 0 0 0 A 12 0 198 0 0 C 13 1 0 191 6 G 14 0 0 0 198 T 15 0 0 198 0 G 16 74 68 32 24 m 17 31 66 52 49 s 18 64 38 48 48 a 19 38 60 42 58 y 20 39 87 36 36 c 21 83 11 18 86 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH74:MA1360.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH18/MA1361.1/JASPAR XX ID bHLH18:MA1361.1:JASPAR XX NA bHLH18 XX DE bHLH18 XX OS Arabidopsis thaliana XX BF 12566; XX P0 A C G T 01 34 128 20 19 c 02 109 2 58 32 r 03 0 143 7 51 Y 04 38 4 153 6 G 05 28 32 8 133 t 06 12 13 116 60 k 07 60 15 29 97 w 08 55 27 31 88 w 09 61 61 15 64 h 10 11 190 0 0 C 11 193 0 4 4 A 12 0 199 0 2 C 13 9 0 192 0 G 14 7 3 0 191 T 15 0 0 197 4 G 16 29 34 79 59 k 17 39 60 34 68 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH18:MA1361.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH77/MA1362.1/JASPAR XX ID bHLH77:MA1362.1:JASPAR XX NA bHLH77 XX DE bHLH77 XX OS Arabidopsis thaliana XX BF 12571; XX P0 A C G T 01 21 12 35 7 r 02 28 13 12 22 w 03 16 2 32 25 k 04 31 4 10 30 w 05 21 13 22 19 d 06 13 7 40 15 g 07 0 23 22 30 b 08 0 75 0 0 C 09 74 0 1 0 A 10 0 69 0 6 C 11 0 0 75 0 G 12 0 0 0 75 T 13 0 0 75 0 G 14 28 36 0 11 m 15 10 10 28 27 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH77:MA1362.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH69/MA1363.1/JASPAR XX ID bHLH69:MA1363.1:JASPAR XX NA bHLH69 XX DE bHLH69 XX OS Arabidopsis thaliana XX BF 12569; XX P0 A C G T 01 1 27 5 1 C 02 6 1 23 4 g 03 3 2 5 24 T 04 5 1 25 3 G 05 6 9 8 11 y 06 0 5 13 16 k 07 9 7 2 16 w 08 0 10 13 11 b 09 4 8 18 4 g 10 0 34 0 0 C 11 34 0 0 0 A 12 0 34 0 0 C 13 1 0 33 0 G 14 0 0 0 34 T 15 0 1 33 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH69:MA1363.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIF7/MA1364.1/JASPAR XX ID PIF7:MA1364.1:JASPAR XX NA PIF7 XX DE PIF7 XX OS Arabidopsis thaliana XX BF 12500; XX P0 A C G T 01 11 33 54 14 s 02 28 20 22 42 w 03 19 9 51 33 k 04 46 8 39 19 r 05 42 14 32 24 r 06 28 8 22 54 w 07 4 29 66 13 s 08 4 85 4 19 C 09 0 112 0 0 C 10 112 0 0 0 A 11 0 106 0 6 C 12 0 0 112 0 G 13 0 0 0 112 T 14 0 0 110 2 G 15 5 24 65 18 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIF7:MA1364.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15448264 RL Huq E., Al-Sady B., Hudson M., Kim C., Apel K., Quail P. H. Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis.. Science 305:1937-1941 (2004). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G47660/MA1365.1/JASPAR XX ID AT5G47660:MA1365.1:JASPAR XX NA AT5G47660 XX DE AT5G47660 XX OS Arabidopsis thaliana XX BF 11391; XX P0 A C G T 01 74 18 13 139 w 02 76 30 33 105 w 03 64 73 14 93 h 04 65 63 25 91 h 05 68 21 46 109 w 06 20 8 25 191 T 07 44 1 0 199 T 08 6 15 10 213 T 09 0 0 0 244 T 10 71 8 0 165 w 11 244 0 0 0 A 12 0 244 0 0 C 13 12 142 10 80 y 14 23 24 169 28 G 15 12 83 6 143 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G47660:MA1365.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G76880/MA1366.1/JASPAR XX ID AT1G76880:MA1366.1:JASPAR XX NA AT1G76880 XX DE AT1G76880 XX OS Arabidopsis thaliana XX BF 12274; XX P0 A C G T 01 292 39 111 38 a 02 101 225 39 115 c 03 149 30 292 9 r 04 0 0 480 0 G 05 0 0 0 480 T 06 416 0 14 50 A 07 480 0 0 0 A 08 449 3 8 20 A 09 380 3 0 97 A 10 316 31 32 101 a 11 191 71 73 145 w 12 149 41 141 149 d 13 164 46 94 176 w 14 207 47 100 126 w 15 248 41 53 138 w 16 226 51 55 148 w XX BS 58617; BS 58618; BS 58619; BS 58620; BS 58621; BS 58622; BS 58623; BS 58624; BS 58625; BS 58626; BS 58627; BS 58628; BS 58629; BS 58630; BS 58631; BS 58632; BS 58633; BS 58634; BS 58635; BS 58636; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G76880:MA1366.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 2255908 RL Dehesh K, Bruce WB, Quail PH. A trans-acting factor that binds to a GT-motif in a phytochrome gene promoter. Science 250:1397-9 (1990). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G76870/MA1367.1/JASPAR XX ID AT1G76870:MA1367.1:JASPAR XX NA AT1G76870 XX DE AT1G76870 XX OS Arabidopsis thaliana XX BF 12273; XX P0 A C G T 01 209 94 53 100 a 02 218 64 59 115 w 03 173 127 65 91 m 04 87 173 73 123 y 05 287 21 3 145 w 06 436 5 5 10 A 07 418 0 2 36 A 08 448 6 0 2 A 09 6 450 0 0 C 10 0 452 0 4 C 11 175 4 257 20 r 12 41 150 222 43 s 13 177 71 53 155 w 14 229 46 35 146 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G76870:MA1367.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22236699 RL Kaplan-Levy RN, Brewer PB, Quon T, Smyth DR. The trihelix family of transcription factors--light, stress and development. Trends Plant Sci 17:163-71 (2012). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G25990/MA1368.1/JASPAR XX ID AT3G25990:MA1368.1:JASPAR XX NA AT3G25990 XX DE AT3G25990 XX OS Arabidopsis thaliana XX BF 11390; XX P0 A C G T 01 75 0 3 0 A 02 78 0 0 0 A 03 0 78 0 0 C 04 0 61 0 17 C 05 62 0 16 0 A 06 0 15 2 61 T 07 17 0 61 0 G 08 4 0 74 0 G 09 0 1 0 77 T 10 0 2 0 76 T 11 77 1 0 0 A 12 63 2 13 0 A 13 38 9 16 15 a 14 33 3 6 36 w 15 9 23 5 41 y 16 22 4 8 44 w 17 15 2 10 51 t 18 46 10 7 15 a 19 49 6 7 16 a 20 17 41 7 13 c 21 24 38 4 12 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G25990:MA1368.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HDG1/MA1369.1/JASPAR XX ID HDG1:MA1369.1:JASPAR XX NA HDG1 XX DE HDG1 XX OS Arabidopsis thaliana XX BF 12421; XX P0 A C G T 01 179 56 274 90 r 02 23 218 0 358 y 03 518 67 0 14 A 04 400 0 0 199 w 05 0 0 0 599 T 06 126 0 0 473 T 07 598 0 1 0 A 08 599 0 0 0 A 09 0 0 0 599 T 10 62 4 488 45 G 11 167 291 23 118 m XX BS 58637; BS 58638; BS 58639; BS 58640; BS 58641; BS 58642; BS 58643; BS 58644; BS 58645; BS 58646; BS 58647; BS 58648; BS 58649; BS 58650; BS 58651; BS 58652; BS 58653; BS 58654; BS 58655; BS 58656; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HDG1:MA1369.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC IDD5/MA1370.1/JASPAR XX ID IDD5:MA1370.1:JASPAR XX NA IDD5 XX DE IDD5 XX OS Arabidopsis thaliana XX BF 12432; XX P0 A C G T 01 40 18 20 82 w 02 29 4 8 119 T 03 1 7 4 148 T 04 0 2 7 151 T 05 0 3 0 157 T 06 0 0 159 1 G 07 0 1 0 159 T 08 0 160 0 0 C 09 3 14 111 32 G 10 1 5 8 146 T 11 3 25 10 122 T 12 17 4 8 131 T 13 53 6 0 101 w 14 13 57 75 15 s 15 6 44 3 107 y 16 31 14 78 37 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=IDD5:MA1370.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC IDD4/MA1371.1/JASPAR XX ID IDD4:MA1371.1:JASPAR XX NA IDD4 XX DE IDD4 XX OS Arabidopsis thaliana XX BF 12431; XX P0 A C G T 01 213 233 42 103 m 02 429 5 140 17 A 03 57 250 242 42 s 04 430 0 14 147 A 05 510 0 0 81 A 06 470 29 78 14 A 07 529 42 16 4 A 08 186 301 78 26 m 09 16 0 575 0 G 10 580 10 0 1 A 11 0 591 0 0 C 12 585 0 6 0 A 13 581 3 7 0 A 14 547 15 23 6 A 15 448 24 35 84 A 16 309 71 61 150 w 17 264 72 61 194 w XX BS 58657; BS 58658; BS 58659; BS 58660; BS 58661; BS 58662; BS 58663; BS 58664; BS 58665; BS 58666; BS 58667; BS 58668; BS 58669; BS 58670; BS 58671; BS 58672; BS 58673; BS 58674; BS 58675; BS 58676; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=IDD4:MA1371.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC STZ/MA1372.1/JASPAR XX ID STZ:MA1372.1:JASPAR XX NA STZ XX DE STZ XX OS Arabidopsis thaliana XX BF 10728; XX P0 A C G T 01 23 402 14 161 y 02 431 0 15 154 W 03 34 325 157 84 s 04 132 102 0 366 t 05 158 155 128 159 h 06 161 153 1 285 h 07 0 486 0 114 C 08 600 0 0 0 A 09 0 444 156 0 S 10 30 13 0 557 T 11 173 158 133 136 m XX BS 58677; BS 58678; BS 58679; BS 58680; BS 58681; BS 58682; BS 58683; BS 58684; BS 58685; BS 58686; BS 58687; BS 58688; BS 58689; BS 58690; BS 58691; BS 58692; BS 58693; BS 58694; BS 58695; BS 58696; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=STZ:MA1372.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC IDD2/MA1373.1/JASPAR XX ID IDD2:MA1373.1:JASPAR XX NA IDD2 XX DE IDD2 XX OS Arabidopsis thaliana XX BF 12430; XX P0 A C G T 01 28 37 2 27 h 02 64 4 25 1 R 03 8 34 33 19 s 04 57 1 2 34 w 05 87 0 0 7 A 06 68 6 17 3 A 07 91 2 1 0 A 08 24 67 3 0 M 09 2 0 92 0 G 10 94 0 0 0 A 11 5 89 0 0 C 12 93 0 1 0 A 13 83 11 0 0 A 14 91 0 3 0 A 15 75 7 0 12 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=IDD2:MA1373.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC IDD7/MA1374.1/JASPAR XX ID IDD7:MA1374.1:JASPAR XX NA IDD7 XX DE IDD7 XX OS Arabidopsis thaliana XX BF 12433; XX P0 A C G T 01 190 232 44 119 m 02 394 20 153 18 r 03 95 224 197 69 s 04 400 3 36 146 A 05 489 1 0 95 A 06 424 49 88 24 A 07 528 31 23 3 A 08 136 375 57 17 c 09 2 0 583 0 G 10 575 9 0 1 A 11 0 585 0 0 C 12 574 0 11 0 A 13 576 2 6 1 A 14 540 11 29 5 A 15 441 25 39 80 A 16 293 89 66 137 a 17 267 77 62 179 w 18 244 95 108 138 a XX BS 58697; BS 58698; BS 58699; BS 58700; BS 58701; BS 58702; BS 58703; BS 58704; BS 58705; BS 58706; BS 58707; BS 58708; BS 58709; BS 58710; BS 58711; BS 58712; BS 58713; BS 58714; BS 58715; BS 58716; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=IDD7:MA1374.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24039602 RL Cui D, Zhao J, Jing Y, Fan M, Liu J, Wang Z, Xin W, Hu Y. The arabidopsis IDD14, IDD15, and IDD16 cooperatively regulate lateral organ morphogenesis and gravitropism by promoting auxin biosynthesis and transport. PLoS Genet : (2013;9(9):e1003759.). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANL2/MA1375.1/JASPAR XX ID ANL2:MA1375.1:JASPAR XX NA ANL2 XX DE ANL2 XX OS Arabidopsis thaliana XX BF 12250; XX P0 A C G T 01 121 3 334 140 g 02 38 513 1 46 C 03 598 0 0 0 A 04 0 1 0 597 T 05 0 1 0 597 T 06 473 0 2 123 A 07 598 0 0 0 A 08 192 1 0 405 w 09 8 0 42 548 T 10 339 8 228 23 r 11 109 284 35 170 y XX BS 58717; BS 58718; BS 58719; BS 58720; BS 58721; BS 58638; BS 58722; BS 58723; BS 58651; BS 58724; BS 58641; BS 58725; BS 58654; BS 58726; BS 58727; BS 58637; BS 58728; BS 58729; BS 58650; BS 58730; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANL2:MA1375.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR3/MA1376.1/JASPAR XX ID DEAR3:MA1376.1:JASPAR XX NA DEAR3 XX DE DEAR3 XX OS Arabidopsis thaliana XX BF 5573; XX P0 A C G T 01 192 143 90 172 w 02 231 61 140 165 w 03 223 7 112 255 w 04 18 6 131 442 T 05 0 0 597 0 G 06 14 1 14 568 T 07 0 597 0 0 C 08 0 0 597 0 G 09 0 0 596 1 G 10 1 71 0 525 T 11 2 1 592 2 G 12 179 100 277 41 r 13 156 180 78 183 h 14 135 84 209 169 k 15 157 112 179 149 r 16 155 160 128 154 h 17 191 76 187 143 r XX BS 58731; BS 58732; BS 57369; BS 58733; BS 58734; BS 58735; BS 58736; BS 58737; BS 58738; BS 58739; BS 57368; BS 58740; BS 58741; BS 57355; BS 58742; BS 57361; BS 58743; BS 58744; BS 58745; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR3:MA1376.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PLT1/MA1377.1/JASPAR XX ID PLT1:MA1377.1:JASPAR XX NA PLT1 XX DE PLT1 XX OS Arabidopsis thaliana XX BF 5581; XX P0 A C G T 01 30 13 97 55 k 02 42 5 111 37 g 03 3 171 0 21 C 04 146 9 24 16 A 05 2 187 3 3 C 06 29 4 156 6 G 07 59 41 64 31 r 08 92 9 16 78 w 09 37 20 5 133 T 10 43 82 0 70 y 11 13 103 1 78 y 12 0 193 0 2 C 13 47 9 126 13 g 14 189 0 6 0 A 15 16 9 142 28 G 16 76 3 114 2 r 17 80 62 10 43 m 18 80 28 49 38 r 19 72 33 54 36 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PLT1:MA1377.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11058102 RL Nole-Wilson S., Krizek B. A. DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA. Nucleic Acids Res. 28:4076-4082 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PLT3/MA1378.1/JASPAR XX ID PLT3:MA1378.1:JASPAR XX NA PLT3 XX DE PLT3 XX OS Arabidopsis thaliana XX BF 17769; XX P0 A C G T 01 11 345 16 159 y 02 135 351 13 32 m 03 2 24 3 502 T 04 33 357 33 108 c 05 2 7 517 5 G 06 222 0 278 31 r 07 167 7 238 119 r 08 368 16 46 101 A 09 223 24 41 243 w 10 96 153 97 185 y 11 37 372 17 105 C 12 23 11 473 24 G 13 83 78 59 311 t 14 98 14 386 33 G 15 131 260 24 116 c XX BS 58746; BS 58747; BS 58748; BS 58749; BS 58750; BS 58751; BS 58752; BS 58753; BS 58754; BS 58755; BS 58756; BS 58757; BS 58758; BS 58759; BS 58760; BS 58761; BS 58762; BS 58763; BS 58764; BS 58765; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PLT3:MA1378.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 11058102 RL Nole-Wilson S., Krizek B. A. DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA. Nucleic Acids Res. 28:4076-4082 (2000). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SOL1/MA1379.1/JASPAR XX ID SOL1:MA1379.1:JASPAR XX NA SOL1 XX DE SOL1 XX OS Arabidopsis thaliana XX BF 17523; BF 10946; XX P0 A C G T 01 192 17 27 364 w 02 95 16 6 483 T 03 167 37 7 389 w 04 219 69 46 266 w 05 441 54 70 35 A 06 543 0 43 14 A 07 466 3 66 65 A 08 484 0 23 93 A 09 0 0 0 600 T 10 0 0 0 600 T 11 0 169 0 431 Y 12 482 0 118 0 A 13 555 45 0 0 A 14 599 0 1 0 A 15 268 16 0 316 w XX BS 58766; BS 58767; BS 58768; BS 58769; BS 58770; BS 58771; BS 58772; BS 58773; BS 58774; BS 58775; BS 58776; BS 56313; BS 58777; BS 58778; BS 56311; BS 56315; BS 58779; BS 58780; BS 58781; BS 58782; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SOL1:MA1379.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G20110/MA1380.1/JASPAR XX ID AT2G20110:MA1380.1:JASPAR XX NA AT2G20110 XX DE AT2G20110 XX OS Arabidopsis thaliana XX BF 13862; BF 10944; XX P0 A C G T 01 236 0 33 328 w 02 0 0 0 597 T 03 0 0 85 512 T 04 0 82 0 515 T 05 403 0 194 0 r 06 597 0 0 0 A 07 597 0 0 0 A 08 91 16 0 490 T 09 152 96 13 336 w 10 8 30 0 559 T 11 51 18 65 463 T 12 139 45 49 364 t 13 232 16 112 237 w 14 425 8 20 144 A 15 409 19 12 157 W XX BS 58783; BS 58784; BS 58785; BS 58786; BS 58787; BS 58788; BS 58789; BS 58790; BS 58791; BS 58792; BS 58793; BS 58794; BS 58768; BS 58795; BS 58796; BS 58797; BS 58798; BS 58799; BS 58777; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G20110:MA1380.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G46070/MA1381.1/JASPAR XX ID AT3G46070:MA1381.1:JASPAR XX NA AT3G46070 XX DE AT3G46070 XX OS Arabidopsis thaliana XX BF 12292; XX P0 A C G T 01 45 53 14 90 y 02 27 91 15 69 y 03 78 47 8 69 w 04 63 55 16 68 h 05 18 79 14 91 y 06 48 64 19 71 y 07 9 0 0 193 T 08 0 202 0 0 C 09 200 0 0 2 A 10 2 200 0 0 C 11 0 0 0 202 T 12 14 131 22 35 c 13 42 44 10 106 t 14 59 78 13 52 h 15 63 65 16 58 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G46070:MA1381.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 24567191 RL Hichri I, Muhovski Y, Žižkova E, Dobrev PI, Franco-Zorrilla JM, Solano R, Lopez-Vidriero I, Motyka V, Lutts S. The Solanum lycopersicum Zinc Finger2 cysteine-2/histidine-2 repressor-like transcription factor regulates development and tolerance to salinity in tomato and Arabidopsis. Plant Physiol 164:1967-90 (2014). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FAR1/MA1382.1/JASPAR XX ID FAR1:MA1382.1:JASPAR XX NA FAR1 XX DE FAR1 XX OS Arabidopsis thaliana XX BF 12403; XX P0 A C G T 01 234 117 98 142 a 02 122 191 97 181 y 03 73 236 58 224 y 04 126 193 13 259 y 05 8 550 17 16 C 06 591 0 0 0 A 07 0 591 0 0 C 08 0 0 591 0 G 09 0 587 0 4 C 10 0 0 590 1 G 11 0 586 0 5 C 12 27 321 50 193 y 13 112 62 147 270 t 14 145 212 82 152 y 15 135 219 66 171 y XX BS 58800; BS 58801; BS 58802; BS 58803; BS 58804; BS 58805; BS 58806; BS 58807; BS 58808; BS 58809; BS 58810; BS 58811; BS 58812; BS 58813; BS 58814; BS 58815; BS 58816; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FAR1:MA1382.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 18033885 RL Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H. Transposase-derived transcription factors regulate light signaling in Arabidopsis. Science 318:1302-5 (2007). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN2/MA1383.1/JASPAR XX ID KAN2:MA1383.1:JASPAR XX NA KAN2 XX DE KAN2 XX OS Arabidopsis thaliana XX BF 12436; XX P0 A C G T 01 74 52 16 72 w 02 45 43 14 112 t 03 58 44 24 88 w 04 93 44 49 28 a 05 30 24 113 47 g 06 137 18 8 51 a 07 170 0 0 44 A 08 0 0 0 214 T 09 214 0 0 0 A 10 0 0 0 214 T 11 2 0 0 212 T 12 3 210 0 1 C 13 7 48 0 159 T 14 24 55 12 123 y 15 46 40 12 116 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN2:MA1383.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G01060/MA1384.1/JASPAR XX ID AT2G01060:MA1384.1:JASPAR XX NA AT2G01060 XX DE AT2G01060 XX OS Arabidopsis thaliana XX BF 12341; XX P0 A C G T 01 344 58 90 106 a 02 349 24 94 131 a 03 301 87 110 100 a 04 261 122 215 0 r 05 0 0 598 0 G 06 451 86 1 60 A 07 598 0 0 0 A 08 0 0 0 598 T 09 531 67 0 0 A 10 3 0 0 595 T 11 88 44 13 453 T 12 14 542 5 37 C 13 26 273 114 185 y XX BS 58817; BS 58818; BS 58819; BS 58820; BS 58821; BS 58822; BS 58823; BS 58824; BS 58825; BS 58826; BS 58827; BS 58828; BS 58829; BS 58830; BS 58831; BS 58832; BS 58833; BS 58834; BS 58835; BS 58836; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G01060:MA1384.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G40260/MA1385.1/JASPAR XX ID AT2G40260:MA1385.1:JASPAR XX NA AT2G40260 XX DE AT2G40260 XX OS Arabidopsis thaliana XX BF 12284; XX P0 A C G T 01 139 129 27 305 t 02 162 121 54 263 w 03 250 72 67 211 w 04 250 66 114 170 w 05 383 35 8 174 w 06 461 0 2 137 A 07 148 151 35 266 y 08 599 0 0 1 A 09 0 0 0 600 T 10 1 0 0 599 T 11 0 600 0 0 C 12 0 194 9 397 y 13 134 152 29 285 y 14 76 83 20 421 T 15 130 87 78 305 t XX BS 58837; BS 58838; BS 58839; BS 58840; BS 58841; BS 58842; BS 58843; BS 58844; BS 58845; BS 58846; BS 58847; BS 58848; BS 58849; BS 58850; BS 58851; BS 58852; BS 58853; BS 58854; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G40260:MA1385.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G25550/MA1386.1/JASPAR XX ID AT1G25550:MA1386.1:JASPAR XX NA AT1G25550 XX DE AT1G25550 XX OS Arabidopsis thaliana XX BF 11450; XX P0 A C G T 01 262 41 280 16 r 02 0 0 599 0 G 03 584 0 1 14 A 04 598 0 0 1 A 05 0 0 0 599 T 06 230 369 0 0 m 07 6 0 9 584 T 08 80 37 47 435 T 09 92 314 94 99 c 10 165 103 145 186 w 11 219 47 154 179 d XX BS 58855; BS 56351; BS 58856; BS 58857; BS 58858; BS 58859; BS 58860; BS 58861; BS 58862; BS 58863; BS 58864; BS 58865; BS 58866; BS 58867; BS 58868; BS 56349; BS 58869; BS 58870; BS 58871; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G25550:MA1386.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G13300/MA1387.1/JASPAR XX ID AT1G13300:MA1387.1:JASPAR XX NA AT1G13300 XX DE AT1G13300 XX OS Arabidopsis thaliana XX BF 11445; XX P0 A C G T 01 234 85 129 148 a 02 126 66 290 114 g 03 260 70 92 174 w 04 392 48 45 111 a 05 101 71 34 390 t 06 132 302 97 65 c 07 144 101 250 101 g 08 423 32 61 80 A 09 548 0 20 28 A 10 0 0 405 191 k 11 596 0 0 0 A 12 0 0 0 596 T 13 25 22 4 545 T 14 0 596 0 0 C 15 43 250 28 275 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G13300:MA1387.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G24120/MA1388.1/JASPAR XX ID AT3G24120:MA1388.1:JASPAR XX NA AT3G24120 XX DE AT3G24120 XX OS Arabidopsis thaliana XX BF 13903; BF 11456; XX P0 A C G T 01 254 145 201 0 r 02 0 0 600 0 G 03 572 22 0 6 A 04 600 0 0 0 A 05 0 0 0 600 T 06 237 363 0 0 m 07 124 7 10 459 T 08 174 54 204 168 d XX BS 58872; BS 58873; BS 58874; BS 58875; BS 58876; BS 58877; BS 58878; BS 58879; BS 58880; BS 58881; BS 58882; BS 58883; BS 58884; BS 58885; BS 58886; BS 58887; BS 58888; BS 58889; BS 58890; BS 58891; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G24120:MA1388.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G29000/MA1389.1/JASPAR XX ID AT5G29000:MA1389.1:JASPAR XX NA AT5G29000 XX DE AT5G29000 XX OS Arabidopsis thaliana XX BF 12364; XX P0 A C G T 01 385 87 85 43 a 02 334 66 105 95 a 03 325 49 188 38 r 04 38 2 545 15 G 05 482 49 25 44 A 06 600 0 0 0 A 07 0 1 59 540 T 08 599 1 0 0 A 09 0 0 1 599 T 10 46 14 43 497 T 11 2 597 1 0 C 12 0 263 154 183 b 13 226 122 125 127 a 14 317 61 44 178 w 15 154 76 101 269 w XX BS 58892; BS 58893; BS 58894; BS 58895; BS 58896; BS 58897; BS 58898; BS 58899; BS 58900; BS 58901; BS 58902; BS 58903; BS 58904; BS 58905; BS 58906; BS 58907; BS 58908; BS 58909; BS 58910; BS 58911; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G29000:MA1389.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G68670/MA1390.1/JASPAR XX ID AT1G68670:MA1390.1:JASPAR XX NA AT1G68670 XX DE AT1G68670 XX OS Arabidopsis thaliana XX BF 11451; XX P0 A C G T 01 110 35 401 54 g 02 296 48 129 127 a 03 441 7 46 106 A 04 44 88 17 451 T 05 90 383 25 102 c 06 201 128 128 143 a 07 316 91 81 112 a 08 489 10 51 50 A 09 6 3 504 87 G 10 598 2 0 0 A 11 17 4 0 579 T 12 63 51 26 460 T 13 5 595 0 0 C XX BS 58912; BS 58913; BS 58914; BS 58915; BS 58916; BS 58917; BS 58918; BS 58919; BS 58920; BS 58921; BS 58922; BS 58923; BS 58924; BS 58925; BS 58926; BS 58927; BS 58928; BS 58929; BS 58930; BS 58931; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G68670:MA1390.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB33/MA1391.1/JASPAR XX ID MYB33:MA1391.1:JASPAR XX NA MYB33 XX DE MYB33 XX OS Arabidopsis thaliana XX BF 11464; XX P0 A C G T 01 239 140 138 83 a 02 34 11 0 555 T 03 600 0 0 0 A 04 600 0 0 0 A 05 0 600 0 0 C 06 52 282 79 187 y 07 120 0 480 0 G 08 352 83 0 165 w 09 308 173 1 118 m 10 220 39 5 336 w 11 161 168 68 203 h XX BS 56488; BS 58932; BS 58933; BS 58934; BS 58935; BS 58936; BS 58937; BS 58938; BS 58939; BS 58940; BS 58941; BS 58942; BS 58943; BS 56490; BS 58944; BS 58945; BS 58946; BS 58947; BS 58948; BS 58949; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB33:MA1391.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB98/MA1392.1/JASPAR XX ID MYB98:MA1392.1:JASPAR XX NA MYB98 XX DE MYB98 XX OS Arabidopsis thaliana XX BF 11459; XX P0 A C G T 01 230 73 130 161 w 02 319 38 56 181 w 03 259 48 67 220 w 04 239 65 57 233 w 05 161 126 57 250 w 06 45 0 549 0 G 07 14 0 0 580 T 08 594 0 0 0 A 09 594 0 0 0 A 10 0 594 0 0 C 11 2 67 492 33 G 12 0 36 307 251 k 13 314 80 0 200 w 14 201 138 16 239 w 15 245 59 167 123 r XX BS 58950; BS 58951; BS 58952; BS 58953; BS 58954; BS 58955; BS 58956; BS 58957; BS 58958; BS 58959; BS 58960; BS 58961; BS 58962; BS 58963; BS 58964; BS 58965; BS 58966; BS 58967; BS 58968; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB98:MA1392.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB70/MA1393.1/JASPAR XX ID MYB70:MA1393.1:JASPAR XX NA MYB70 XX DE MYB70 XX OS Arabidopsis thaliana XX BF 17728; XX P0 A C G T 01 70 120 15 395 t 02 600 0 0 0 A 03 577 23 0 0 A 04 0 600 0 0 C 05 37 259 156 148 s 06 90 0 510 0 G 07 239 56 12 293 w 08 312 136 5 147 a 09 296 28 32 244 w 10 219 89 27 265 w 11 432 27 26 115 A 12 422 79 35 64 A 13 136 348 33 83 c 14 119 223 90 168 y XX BS 58969; BS 58970; BS 58971; BS 58972; BS 58973; BS 58974; BS 58975; BS 58976; BS 58977; BS 58978; BS 58979; BS 58980; BS 58981; BS 58982; BS 58983; BS 58984; BS 58985; BS 58986; BS 58987; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB70:MA1393.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB73/MA1394.1/JASPAR XX ID MYB73:MA1394.1:JASPAR XX NA MYB73 XX DE MYB73 XX OS Arabidopsis thaliana XX BF 12481; XX P0 A C G T 01 31 98 0 471 T 02 600 0 0 0 A 03 600 0 0 0 A 04 0 600 0 0 C 05 14 261 155 170 b 06 29 0 571 0 G 07 208 56 0 336 w 08 323 148 0 129 a 09 297 25 24 254 w 10 212 130 44 214 w 11 269 74 44 213 w XX BS 58988; BS 58989; BS 58990; BS 58991; BS 58992; BS 58993; BS 58994; BS 58995; BS 58996; BS 58997; BS 58998; BS 58999; BS 59000; BS 59001; BS 59002; BS 59003; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB73:MA1394.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB77/MA1395.1/JASPAR XX ID MYB77:MA1395.1:JASPAR XX NA MYB77 XX DE MYB77 XX OS Arabidopsis thaliana XX BF 10005; XX P0 A C G T 01 130 199 96 175 y 02 150 97 195 158 d 03 150 58 248 144 r 04 154 87 107 252 w 05 163 83 116 238 w 06 244 33 144 179 w 07 230 56 28 286 w 08 208 0 211 181 d 09 387 14 104 95 a 10 3 572 0 25 C 11 144 168 288 0 s 12 0 0 600 0 G 13 0 0 0 600 T 14 0 0 0 600 T 15 433 0 119 48 A XX BS 59004; BS 59005; BS 59006; BS 59007; BS 59008; BS 59009; BS 59010; BS 59011; BS 59012; BS 59013; BS 59014; BS 59015; BS 59016; BS 59017; BS 59018; BS 59019; BS 59020; BS 59021; BS 59022; BS 59023; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB77:MA1395.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 28790414 RL Rosanova A, Colliva A, Osella M, Caselle M. Modelling the evolution of transcription factor binding preferences in complex eukaryotes. Sci Rep 7:7596 (2017). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA6/MA1396.1/JASPAR XX ID GATA6:MA1396.1:JASPAR XX NA GATA6 XX DE GATA6 XX OS Arabidopsis thaliana XX BF 11098; XX P0 A C G T 01 45 159 37 176 y 02 391 0 22 4 A 03 0 0 417 0 G 04 417 0 0 0 A 05 0 0 0 417 T 06 0 417 0 0 C 07 0 69 6 342 T 08 345 0 72 0 A 09 93 57 244 23 g 10 298 50 30 39 A 11 94 47 40 236 t 12 91 162 53 111 y 13 99 117 44 157 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA6:MA1396.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g74840/MA1397.1/JASPAR XX ID At1g74840:MA1397.1:JASPAR XX NA At1g74840 XX DE At1g74840 XX OS Arabidopsis thaliana XX BF 11452; XX P0 A C G T 01 300 8 14 278 w 02 255 32 114 199 w 03 46 92 2 460 T 04 39 0 561 0 G 05 0 0 600 0 G 06 600 0 0 0 A 07 0 0 0 600 T 08 578 6 5 11 A 09 549 0 38 13 A 10 168 60 235 137 r 11 208 72 228 92 r XX BS 59024; BS 59025; BS 59026; BS 59027; BS 59028; BS 59029; BS 59030; BS 59031; BS 59032; BS 59033; BS 59034; BS 59035; BS 59036; BS 59037; BS 59038; BS 59039; BS 59040; BS 59041; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g74840:MA1397.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g47390/MA1398.1/JASPAR XX ID At5g47390:MA1398.1:JASPAR XX NA At5g47390 XX DE At5g47390 XX OS Arabidopsis thaliana XX BF 11469; XX P0 A C G T 01 225 119 52 203 w 02 190 122 67 220 w 03 277 73 63 186 w 04 290 45 92 172 w 05 76 285 48 190 y 06 136 300 57 106 c 07 11 44 0 544 T 08 11 6 15 567 T 09 599 0 0 0 A 10 0 0 0 599 T 11 0 599 0 0 C 12 0 527 0 72 C 13 441 4 74 80 A 14 214 126 28 231 w 15 305 16 9 269 w XX BS 59042; BS 59043; BS 59044; BS 59045; BS 59046; BS 59047; BS 59048; BS 59049; BS 59050; BS 59051; BS 59052; BS 59053; BS 59054; BS 59055; BS 59056; BS 59057; BS 59058; BS 59059; BS 59060; BS 59061; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g47390:MA1398.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g08520/MA1399.1/JASPAR XX ID At5g08520:MA1399.1:JASPAR XX NA At5g08520 XX DE At5g08520 XX OS Arabidopsis thaliana XX BF 11465; XX P0 A C G T 01 194 69 166 169 d 02 292 23 72 211 w 03 248 17 15 318 w 04 209 42 180 167 d 05 221 59 30 288 w 06 197 2 376 23 r 07 0 0 596 2 G 08 598 0 0 0 A 09 0 0 0 598 T 10 590 0 8 0 A 11 598 0 0 0 A 12 5 53 495 45 G 13 204 40 312 42 r XX BS 59062; BS 59063; BS 59064; BS 59065; BS 59066; BS 59067; BS 59068; BS 59069; BS 59070; BS 59071; BS 59072; BS 59073; BS 59074; BS 59075; BS 59076; BS 59077; BS 59078; BS 59079; BS 59080; BS 59081; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g08520:MA1399.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g19000/MA1400.1/JASPAR XX ID At1g19000:MA1400.1:JASPAR XX NA At1g19000 XX DE At1g19000 XX OS Arabidopsis thaliana XX BF 11448; XX P0 A C G T 01 272 22 73 232 w 02 319 9 28 243 w 03 282 27 136 154 w 04 33 81 1 484 T 05 29 0 570 0 G 06 0 0 599 0 G 07 599 0 0 0 A 08 0 0 0 599 T 09 580 8 5 6 A 10 554 0 33 12 A 11 82 56 338 123 g 12 172 61 319 47 r 13 161 86 48 304 w 14 169 71 86 273 w XX BS 59082; BS 59083; BS 59084; BS 59085; BS 59086; BS 59087; BS 59088; BS 59089; BS 59090; BS 59091; BS 59092; BS 59093; BS 59094; BS 59095; BS 59096; BS 59097; BS 59098; BS 59099; BS 59100; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g19000:MA1400.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EPR1/MA1401.1/JASPAR XX ID EPR1:MA1401.1:JASPAR XX NA EPR1 XX DE EPR1 XX OS Arabidopsis thaliana XX BF 11447; XX P0 A C G T 01 252 93 164 88 r 02 421 9 16 151 W 03 594 0 0 3 A 04 597 0 0 0 A 05 597 0 0 0 A 06 0 0 0 597 T 07 597 0 0 0 A 08 0 0 0 597 T 09 0 597 0 0 C 10 22 46 3 526 T 11 154 100 66 277 w 12 297 102 108 90 a XX BS 59101; BS 59102; BS 59103; BS 59104; BS 59105; BS 59106; BS 59107; BS 59108; BS 59109; BS 59110; BS 59111; BS 59112; BS 59113; BS 59114; BS 59115; BS 59116; BS 59117; BS 59118; BS 59119; BS 59120; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EPR1:MA1401.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BPC6/MA1402.1/JASPAR XX ID BPC6:MA1402.1:JASPAR XX NA BPC6 XX DE BPC6 XX OS Arabidopsis thaliana XX BF 12379; XX P0 A C G T 01 24 134 2 28 C 02 18 19 0 151 T 03 13 161 10 4 C 04 15 7 5 161 T 05 12 142 7 27 C 06 6 2 5 175 T 07 0 160 3 25 C 08 2 6 1 179 T 09 1 177 2 8 C 10 0 1 0 187 T 11 1 168 0 19 C 12 2 0 0 186 T 13 2 186 0 0 C 14 0 1 0 187 T 15 12 169 0 7 C 16 4 3 0 181 T 17 12 168 5 3 C 18 8 6 0 174 T 19 6 170 0 12 C 20 3 2 2 181 T 21 50 123 1 14 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BPC6:MA1402.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15722463 RL Kooiker M., Airoldi C. A., Losa A., Manzotti P. S., Finzi L., Kater M. M., Colombo L. BASIC PENTACYSTEINE1, a GA binding protein that induces conformational changes in the regulatory region of the homeotic Arabidopsis gene SEEDSTICK.. Plant Cell 17:722-729 (2005). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BPC5/MA1403.1/JASPAR XX ID BPC5:MA1403.1:JASPAR XX NA BPC5 XX DE BPC5 XX OS Arabidopsis thaliana XX BF 12378; XX P0 A C G T 01 95 0 7 0 A 02 3 0 99 0 G 03 102 0 0 0 A 04 2 0 98 2 G 05 100 0 0 2 A 06 1 0 99 2 G 07 99 0 0 3 A 08 0 1 100 1 G 09 99 0 2 1 A 10 1 1 100 0 G 11 102 0 0 0 A 12 0 0 102 0 G 13 102 0 0 0 A 14 4 0 97 1 G 15 101 0 1 0 A 16 2 0 100 0 G 17 101 0 1 0 A 18 1 1 100 0 G 19 98 0 1 3 A 20 1 1 99 1 G 21 101 0 1 0 A 22 0 1 101 0 G 23 100 0 0 2 A 24 1 1 99 1 G 25 98 0 3 1 A 26 1 1 99 1 G 27 98 0 0 4 A 28 0 4 98 0 G 29 100 2 0 0 A 30 5 3 91 3 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BPC5:MA1403.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15722463 RL Kooiker M., Airoldi C. A., Losa A., Manzotti P. S., Finzi L., Kater M. M., Colombo L. BASIC PENTACYSTEINE1, a GA binding protein that induces conformational changes in the regulatory region of the homeotic Arabidopsis gene SEEDSTICK.. Plant Cell 17:722-729 (2005). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BPC1/MA1404.1/JASPAR XX ID BPC1:MA1404.1:JASPAR XX NA BPC1 XX DE BPC1 XX OS Arabidopsis thaliana XX BF 12377; XX P0 A C G T 01 82 18 421 18 G 02 483 4 29 23 A 03 8 15 483 33 G 04 501 0 18 20 A 05 67 9 448 15 G 06 500 0 39 0 A 07 43 17 461 18 G 08 478 3 44 14 A 09 39 0 482 18 G 10 520 6 2 11 A 11 27 2 508 2 G 12 518 11 3 7 A 13 62 9 450 18 G 14 460 0 56 23 A 15 54 0 462 23 G 16 485 0 54 0 A 17 41 10 467 21 G 18 508 0 9 22 A 19 71 2 459 7 G 20 478 12 35 14 A 21 73 19 440 7 G 22 450 15 39 35 A 23 47 20 427 45 G 24 436 22 43 38 A XX BS 59121; BS 59122; BS 59123; BS 59124; BS 59125; BS 59126; BS 59127; BS 59128; BS 59129; BS 59130; BS 59131; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BPC1:MA1404.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 15722463 RL Kooiker M., Airoldi C. A., Losa A., Manzotti P. S., Finzi L., Kater M. M., Colombo L. BASIC PENTACYSTEINE1, a GA binding protein that induces conformational changes in the regulatory region of the homeotic Arabidopsis gene SEEDSTICK.. Plant Cell 17:722-729 (2005). RN [2]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SIZF2/MA1405.1/JASPAR XX ID SIZF2:MA1405.1:JASPAR XX NA SIZF2 XX DE SIZF2 XX OS Solanum lycopersicum XX BF 17263; XX P0 A C G T 01 16191 20703 39343 23762 g 02 88380 627 8331 2662 A 03 264 78711 20496 530 C 04 3329 918 1251 94502 T 05 7440 2953 88717 889 G 06 63395 4073 4720 27813 w 07 889 88717 2953 7440 C 08 94502 1251 918 3329 A 09 530 20496 78711 264 G 10 2662 8331 627 88380 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SIZF2:MA1405.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 9421523 RL Kubo Ki, Sakamoto A, Kobayashi A, Rybka Z, Kanno Y, Nakagawa H, Takatsuji H. Cys2/His2 zinc-finger protein family of petunia: evolution and general mechanism of target-sequence recognition. Nucleic Acids Res 26:608-15 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB4/MA1406.1/JASPAR XX ID ATHB4:MA1406.1:JASPAR XX NA ATHB4 XX DE ATHB4 XX OS Arabidopsis thaliana XX BF 11167; XX P0 A C G T 01 2392 40381 1915 55312 y 02 82255 3298 618 13829 A 03 98348 1291 93 268 A 04 297 333 76 99294 T 05 3466 42828 40460 13246 s 06 99128 66 333 473 A 07 998 228 422 98352 T 08 5565 764 2806 90866 T 09 18045 3599 68409 9947 G 10 12542 33825 35017 18616 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB4:MA1406.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OsRR22/MA1409.1/JASPAR XX ID OsRR22:MA1409.1:JASPAR XX NA OsRR22 XX DE OsRR22 XX OS Oryza sativa XX BF 17441; XX P0 A C G T 01 51257 11381 11771 25591 w 02 86870 3042 6041 4047 A 03 486 522 97670 1322 G 04 97906 287 778 1028 A 05 495 484 510 98511 T 06 72395 7724 464 19416 A 07 444 91648 611 7297 C 08 1690 2838 92633 2838 G 09 13926 33145 46756 6173 s 10 20468 11356 5511 62666 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OsRR22:MA1409.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 12610214 RL Imamura A, Kiba T, Tajima Y, Yamashino T, Mizuno T. In vivo and in vitro characterization of the ARR11 response regulator implicated in the His-to-Asp phosphorelay signal transduction in Arabidopsis thaliana. Plant Cell Physiol 44:122-31 (2003). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC UIF1/MA1413.1/JASPAR XX ID UIF1:MA1413.1:JASPAR XX NA UIF1 XX DE UIF1 XX OS Arabidopsis thaliana XX BF 12304; XX P0 A C G T 01 42370 15280 20606 21744 a 02 55605 8841 19501 16053 a 03 86079 1019 5263 7639 A 04 310 188 86115 13387 G 05 89162 201 10588 50 A 06 21230 96 172 78503 T 07 11260 8610 5361 74769 T 08 460 98826 93 621 C 09 19080 31467 20087 29365 y 10 30642 18165 32999 18194 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=UIF1:MA1413.1:JASPAR XX CC PBM XX RN [1]; RX PUBMED: 12215502 RL Hosoda K., Imamura A., Katoh E., Hatta T., Tachiki M., Yamada H., Mizuno T., Yamazaki T. Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators.. Plant Cell 14:2015-2029 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2FA/MA1414.1/JASPAR XX ID E2FA:MA1414.1:JASPAR XX NA E2FA XX DE E2FA XX OS Arabidopsis thaliana XX BF 7501; XX P0 A C G T 01 394 203 184 670 w 02 355 339 579 178 g 03 23 62 1355 11 G 04 21 1375 22 33 C 05 35 6 1391 19 G 06 7 1415 18 11 C 07 1 1376 1 73 C 08 1368 10 21 52 A 09 574 345 121 411 w 10 535 293 334 289 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2FA:MA1414.1:JASPAR XX CC ChIP-seq XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC REF6/MA1415.1/JASPAR XX ID REF6:MA1415.1:JASPAR XX NA REF6 XX DE REF6 XX OS Arabidopsis thaliana XX BF 17535; XX P0 A C G T 01 1983 209 1144 351 r 02 2634 137 577 339 A 03 3458 27 24 178 A 04 3511 34 118 24 A 05 1 3661 1 24 C 06 3622 25 30 10 A 07 6 21 3625 35 G 08 3533 21 105 28 A 09 45 10 3581 51 G 10 752 1063 884 988 y 11 2249 473 441 524 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=REF6:MA1415.1:JASPAR XX CC ChIP-seq XX RN [1]; RX PUBMED: 27111034 RL Li C, Gu L, Gao L, Chen C, Wei CQ, Qiu Q, Chien CW, Wang S, Jiang L, Ai LF, Chen CY, Yang S, Nguyen V, Qi Y, Snyder MP, Burlingame AL, Kohalmi SE, Huang S, Cao X, Wang ZY, Wu K, Chen X, Cui Y. Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis. Nat Genet 48:687-93 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC O2/MA1417.1/JASPAR XX ID O2:MA1417.1:JASPAR XX NA O2 XX DE O2 XX OS Zea mays XX BF 17311; XX P0 A C G T 01 306 374 1046 312 g 02 129 391 151 1367 t 03 29 9 1895 105 G 04 56 1959 12 11 C 05 3 2016 17 2 C 06 2021 3 12 2 A 07 18 1485 7 528 Y 08 354 103 1571 10 G 09 4 13 2 2019 T 10 19 1991 28 0 C 11 1961 11 62 4 A 12 37 282 412 1307 t 13 124 1672 97 145 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=O2:MA1417.1:JASPAR XX CC ChIP-seq XX RN [1]; RX PUBMED: 25215497 RL Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G60130.DAP/M0001/AthalianaCistrome XX ID AT5G60130.DAP:M0001:AthalianaCistrome XX NA AT5G60130.DAP XX DE AT5G60130.DAP XX OS Arabidopsis thaliana XX BF 12314; XX P0 A C G T 01 421 31 83 65 A 02 464 18 57 61 A 03 21 12 538 29 G 04 121 276 128 75 c 05 532 19 33 16 A 06 510 1 24 65 A 07 473 0 9 118 A 08 376 22 26 176 w 09 217 117 82 184 w 10 221 159 72 148 m 11 149 80 87 284 t 12 438 22 84 56 A 13 501 6 24 69 A 14 13 0 563 24 G 15 114 264 155 67 s 16 540 24 11 25 A 17 517 15 25 43 A 18 477 18 11 94 A 19 386 24 26 164 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G60130.DAP:M0001:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VRN1.DAP/M0002/AthalianaCistrome XX ID VRN1.DAP:M0002:AthalianaCistrome XX NA VRN1.DAP XX DE VRN1.DAP XX OS Arabidopsis thaliana XX BF 12538; XX P0 A C G T 01 113 61 59 342 t 02 102 76 43 354 t 03 114 59 38 364 t 04 43 47 98 387 t 05 67 59 10 439 T 06 48 5 39 483 T 07 10 52 22 491 T 08 23 18 18 516 T 09 35 0 23 517 T 10 9 15 0 551 T 11 0 0 14 561 T 12 6 15 0 554 T 13 6 4 5 560 T 14 2 4 10 559 T 15 8 0 8 559 T 16 10 5 0 560 T 17 0 7 0 568 T 18 0 8 0 567 T 19 0 2 4 569 T 20 2 0 6 567 T 21 0 0 0 575 T 22 0 3 0 572 T 23 0 0 0 575 T 24 4 0 2 568 T 25 0 17 5 553 T 26 3 10 36 526 T 27 33 0 191 351 k 28 70 17 94 394 T 29 83 207 133 151 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VRN1.DAP:M0002:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FUS3.DAP/M0003/AthalianaCistrome XX ID FUS3.DAP:M0003:AthalianaCistrome XX NA FUS3.DAP XX DE FUS3.DAP XX OS Arabidopsis thaliana XX BF 7508; XX P0 A C G T 01 319 76 62 132 a 02 161 155 63 210 h 03 342 47 94 106 a 04 90 118 33 348 t 05 271 50 230 38 r 06 0 589 0 0 C 07 589 0 0 0 A 08 0 0 0 589 T 09 3 1 585 0 G 10 0 589 0 0 C 11 588 0 1 0 A 12 206 30 23 330 w 13 207 58 229 95 r 14 135 222 77 155 y 15 329 63 77 120 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FUS3.DAP:M0003:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NGA4.DAP/M0004/AthalianaCistrome XX ID NGA4.DAP:M0004:AthalianaCistrome XX NA NGA4.DAP XX DE NGA4.DAP XX OS Arabidopsis thaliana XX BF 17754; XX P0 A C G T 01 129 198 80 193 y 02 146 236 49 169 y 03 84 89 55 372 t 04 36 106 230 228 k 05 119 69 155 257 k 06 13 128 64 395 t 07 0 600 0 0 C 08 596 2 2 0 A 09 2 0 589 9 G 10 83 2 515 0 G 11 42 12 20 526 T 12 142 4 366 88 g 13 218 83 146 153 w 14 197 93 71 239 w 15 193 59 71 277 w 16 144 134 57 265 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NGA4.DAP:M0004:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC REM16.DAP/M0005/AthalianaCistrome XX ID REM16.DAP:M0005:AthalianaCistrome XX NA REM16.DAP XX DE REM16.DAP XX OS Arabidopsis thaliana XX BF 17756; XX P0 A C G T 01 57 14 5 166 T 02 54 4 10 174 T 03 33 11 11 187 T 04 146 7 33 56 a 05 23 128 10 81 y 06 26 4 138 74 k 07 19 1 75 147 k 08 0 1 6 235 T 09 0 1 0 241 T 10 1 2 0 239 T 11 0 2 0 240 T 12 5 2 228 7 G 13 12 0 229 1 G 14 0 236 0 6 C 15 6 0 235 1 G 16 2 0 240 0 G 17 31 1 210 0 G 18 241 1 0 0 A 19 241 1 0 0 A 20 240 0 2 0 A 21 219 8 0 15 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=REM16.DAP:M0005:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VRN1.ampDAP/M0006/AthalianaCistrome XX ID VRN1.ampDAP:M0006:AthalianaCistrome XX NA VRN1.ampDAP XX DE VRN1.ampDAP XX OS Arabidopsis thaliana XX BF 12538; XX P0 A C G T 01 85 123 106 59 s 02 148 2 4 219 w 03 2 74 162 135 k 04 55 55 49 214 t 05 25 4 20 324 T 06 0 2 7 364 T 07 0 0 5 368 T 08 0 0 7 366 T 09 0 0 0 373 T 10 0 4 2 367 T 11 0 0 5 368 T 12 0 0 3 370 T 13 0 14 26 333 T 14 0 43 54 276 T 15 4 49 44 276 T 16 9 41 45 278 T 17 6 45 85 237 t 18 43 40 135 155 k 19 46 79 104 144 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VRN1.ampDAP:M0006:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G25475.DAP/M0007/AthalianaCistrome XX ID AT5G25475.DAP:M0007:AthalianaCistrome XX NA AT5G25475.DAP XX DE AT5G25475.DAP XX OS Arabidopsis thaliana XX BF 17772; XX P0 A C G T 01 0 196 22 0 C 02 218 0 0 0 A 03 218 0 0 0 A 04 0 0 218 0 G 05 0 218 0 0 C 06 218 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G25475.DAP:M0007:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G60130.ampDAP/M0008/AthalianaCistrome XX ID AT5G60130.ampDAP:M0008:AthalianaCistrome XX NA AT5G60130.ampDAP XX DE AT5G60130.ampDAP XX OS Arabidopsis thaliana XX BF 12314; XX P0 A C G T 01 48 12 40 55 d 02 27 0 0 128 T 03 13 1 1 140 T 04 9 3 1 142 T 05 0 0 0 155 T 06 10 38 87 20 g 07 2 142 0 11 C 08 5 7 0 143 T 09 4 12 3 136 T 10 108 12 10 25 A 11 42 6 20 87 w 12 47 20 41 47 d 13 24 0 4 127 T 14 16 0 4 135 T 15 3 0 1 151 T 16 2 0 0 153 T 17 8 18 121 8 G 18 3 142 0 10 C 19 2 3 2 148 T 20 5 24 2 124 T 21 102 17 12 24 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G60130.ampDAP:M0008:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G18090.DAP/M0009/AthalianaCistrome XX ID AT5G18090.DAP:M0009:AthalianaCistrome XX NA AT5G18090.DAP XX DE AT5G18090.DAP XX OS Arabidopsis thaliana XX BF 12307; XX P0 A C G T 01 36 24 59 28 g 02 61 22 35 29 a 03 46 26 19 56 w 04 0 0 147 0 G 05 147 0 0 0 A 06 0 0 0 147 T 07 0 1 146 0 G 08 147 0 0 0 A 09 147 0 0 0 A 10 43 18 53 33 r 11 58 38 26 25 m 12 56 28 30 33 a 13 50 24 41 32 r 14 64 21 31 31 a 15 39 15 48 45 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G18090.DAP:M0009:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G77200.ampDAP/M0010/AthalianaCistrome XX ID AT1G77200.ampDAP:M0010:AthalianaCistrome XX NA AT1G77200.ampDAP XX DE AT1G77200.ampDAP XX OS Arabidopsis thaliana XX BF 8869; XX P0 A C G T 01 222 78 104 193 w 02 128 63 186 220 k 03 1 37 0 559 T 04 0 0 597 0 G 05 3 0 0 594 T 06 0 597 0 0 C 07 0 0 597 0 G 08 1 0 596 0 G 09 0 129 0 468 T 10 126 46 372 53 g 11 239 85 180 93 r 12 191 159 81 166 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G77200.ampDAP:M0010:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR2.ampDAP/M0011/AthalianaCistrome XX ID DEAR2.ampDAP:M0011:AthalianaCistrome XX NA DEAR2.ampDAP XX DE DEAR2.ampDAP XX OS Arabidopsis thaliana XX BF 12389; XX P0 A C G T 01 217 35 159 187 d 02 47 70 84 397 t 03 0 0 598 0 G 04 99 3 68 428 T 05 0 598 0 0 C 06 0 0 598 0 G 07 0 0 598 0 G 08 0 85 0 513 T 09 10 8 549 31 G 10 215 92 218 73 r 11 161 195 63 179 h 12 138 56 283 121 g 13 178 94 222 104 r 14 137 150 109 202 y 15 140 84 244 130 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR2.ampDAP:M0011:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF4.ampDAP/M0013/AthalianaCistrome XX ID CBF4.ampDAP:M0013:AthalianaCistrome XX NA CBF4.ampDAP XX DE CBF4.ampDAP XX OS Arabidopsis thaliana XX BF 12382; XX P0 A C G T 01 128 173 68 230 y 02 86 155 209 149 s 03 546 2 16 35 A 04 4 23 15 557 T 05 0 0 599 0 G 06 0 0 0 599 T 07 0 599 0 0 C 08 0 0 599 0 G 09 3 0 596 0 G 10 0 309 0 290 y 11 327 75 163 34 r 12 277 73 161 88 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF4.ampDAP:M0013:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF15.ampDAP/M0014/AthalianaCistrome XX ID ERF15.ampDAP:M0014:AthalianaCistrome XX NA ERF15.ampDAP XX DE ERF15.ampDAP XX OS Arabidopsis thaliana XX BF 4982; XX P0 A C G T 01 161 213 79 147 m 02 156 98 224 122 r 03 105 262 102 131 c 04 127 238 74 161 y 05 172 96 205 127 r 06 112 229 82 177 y 07 163 213 28 196 h 08 167 50 140 243 w 09 48 244 85 223 y 10 306 278 16 0 m 11 0 0 599 1 G 12 0 600 0 0 C 13 60 539 0 1 C 14 6 0 594 0 G 15 3 577 0 20 C 16 1 599 0 0 C 17 253 8 235 104 r 18 36 241 47 276 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF15.ampDAP:M0014:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g19210.ampDAP/M0016/AthalianaCistrome XX ID At1g19210.ampDAP:M0016:AthalianaCistrome XX NA At1g19210.ampDAP XX DE At1g19210.ampDAP XX OS Arabidopsis thaliana XX BF 12331; XX P0 A C G T 01 155 207 102 130 m 02 209 120 113 152 w 03 147 141 97 209 t 04 173 220 50 151 h 05 181 92 133 188 w 06 106 208 85 195 y 07 87 410 26 71 C 08 401 0 135 58 a 09 0 594 0 0 C 10 1 593 0 0 C 11 0 0 594 0 G 12 256 21 56 261 w 13 0 594 0 0 C 14 161 359 24 50 m 15 349 62 45 138 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g19210.ampDAP:M0016:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF7.DAP/M0018/AthalianaCistrome XX ID ERF7.DAP:M0018:AthalianaCistrome XX NA ERF7.DAP XX DE ERF7.DAP XX OS Arabidopsis thaliana XX BF 2877; XX P0 A C G T 01 72 278 52 191 y 02 81 307 69 136 c 03 170 95 169 159 d 04 92 321 28 152 y 05 74 362 44 113 c 06 142 105 202 144 g 07 78 314 54 147 c 08 83 366 18 126 c 09 173 63 172 185 d 10 39 321 55 178 y 11 87 411 20 75 C 12 125 20 230 218 k 13 37 467 40 49 C 14 50 525 0 18 C 15 70 0 494 29 G 16 6 574 0 13 C 17 0 593 0 0 C 18 55 0 520 18 G 19 4 327 10 252 y 20 89 394 35 75 c 21 316 24 133 120 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF7.DAP:M0018:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP211.ampDAP/M0019/AthalianaCistrome XX ID RAP211.ampDAP:M0019:AthalianaCistrome XX NA RAP211.ampDAP XX DE RAP211.ampDAP XX OS Arabidopsis thaliana XX BF 5602; XX P0 A C G T 01 118 158 62 249 y 02 105 178 90 214 y 03 130 138 90 229 t 04 111 140 69 267 t 05 26 158 340 63 s 06 0 0 586 1 G 07 91 485 7 4 C 08 0 587 0 0 C 09 0 0 587 0 G 10 0 1 586 0 G 11 1 568 0 18 C 12 149 105 142 191 w 13 192 86 167 142 r 14 164 144 78 201 w 15 118 70 179 220 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP211.ampDAP:M0019:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G16280.ampDAP/M0020/AthalianaCistrome XX ID AT3G16280.ampDAP:M0020:AthalianaCistrome XX NA AT3G16280.ampDAP XX DE AT3G16280.ampDAP XX OS Arabidopsis thaliana XX BF 12290; XX P0 A C G T 01 46 284 96 172 y 02 13 565 14 6 C 03 556 0 42 0 A 04 0 598 0 0 C 05 0 598 0 0 C 06 0 0 598 0 G 07 598 0 0 0 A 08 0 598 0 0 C 09 592 0 6 0 A 10 238 188 74 98 m 11 234 74 32 258 w 12 209 84 94 211 w 13 164 133 76 225 w 14 141 164 84 209 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G16280.ampDAP:M0020:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g33710.ampDAP/M0021/AthalianaCistrome XX ID At2g33710.ampDAP:M0021:AthalianaCistrome XX NA At2g33710.ampDAP XX DE At2g33710.ampDAP XX OS Arabidopsis thaliana XX BF 17734; XX P0 A C G T 01 165 72 153 210 d 02 70 291 90 149 c 03 83 463 29 25 C 04 28 10 451 111 G 05 0 477 109 14 C 06 18 580 2 0 C 07 4 0 596 0 G 08 4 566 6 24 C 09 25 574 1 0 C 10 105 3 470 22 G 11 39 265 34 262 y 12 188 241 25 146 m 13 276 18 129 177 w 14 118 221 42 219 y 15 170 206 55 169 h 16 130 61 204 205 k 17 86 246 102 166 y 18 155 249 65 131 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g33710.ampDAP:M0021:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF105.ampDAP/M0022/AthalianaCistrome XX ID ERF105.ampDAP:M0022:AthalianaCistrome XX NA ERF105.ampDAP XX DE ERF105.ampDAP XX OS Arabidopsis thaliana XX BF 10428; XX P0 A C G T 01 102 247 92 150 y 02 120 263 71 137 c 03 147 113 193 138 g 04 94 258 100 139 c 05 112 262 92 125 c 06 138 85 202 166 k 07 77 289 81 144 c 08 91 300 82 118 c 09 166 97 211 117 r 10 83 290 88 130 c 11 85 318 63 125 c 12 162 81 239 109 r 13 82 292 84 133 c 14 117 326 40 108 c 15 149 55 227 160 d 16 33 326 123 109 c 17 104 476 8 3 C 18 15 0 550 26 G 19 0 585 6 0 C 20 7 584 0 0 C 21 17 0 570 4 G 22 4 524 6 57 C 23 0 589 2 0 C 24 241 0 273 77 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF105.ampDAP:M0022:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF1.ampDAP/M0023/AthalianaCistrome XX ID CBF1.ampDAP:M0023:AthalianaCistrome XX NA CBF1.ampDAP XX DE CBF1.ampDAP XX OS Arabidopsis thaliana XX BF 7499; XX P0 A C G T 01 156 154 77 211 h 02 88 135 194 181 k 03 389 12 79 118 a 04 65 81 39 413 T 05 0 0 598 0 G 06 0 0 0 598 T 07 0 598 0 0 C 08 0 0 598 0 G 09 8 0 590 0 G 10 0 321 0 277 y 11 215 98 222 63 r 12 252 62 188 96 r 13 205 144 101 148 a 14 152 101 212 133 r 15 197 89 156 156 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF1.ampDAP:M0023:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB19.ampDAP/M0024/AthalianaCistrome XX ID DREB19.ampDAP:M0024:AthalianaCistrome XX NA DREB19.ampDAP XX DE DREB19.ampDAP XX OS Arabidopsis thaliana XX BF 12394; XX P0 A C G T 01 189 147 69 190 w 02 118 78 98 301 t 03 235 101 74 185 w 04 346 229 20 0 m 05 561 0 34 0 A 06 0 595 0 0 C 07 0 595 0 0 C 08 0 0 595 0 G 09 542 53 0 0 A 10 0 595 0 0 C 11 410 35 2 148 A 12 25 31 0 539 T 13 255 29 25 286 w 14 242 66 137 150 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB19.ampDAP:M0024:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CEJ1.ampDAP/M0026/AthalianaCistrome XX ID CEJ1.ampDAP:M0026:AthalianaCistrome XX NA CEJ1.ampDAP XX DE CEJ1.ampDAP XX OS Arabidopsis thaliana XX BF 5585; XX P0 A C G T 01 197 145 77 176 w 02 220 69 146 160 w 03 85 166 95 249 y 04 8 574 5 8 C 05 583 0 12 0 A 06 0 595 0 0 C 07 0 595 0 0 C 08 0 0 595 0 G 09 588 2 0 5 A 10 0 595 0 0 C 11 413 169 6 7 M 12 270 121 18 186 w 13 173 133 70 219 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CEJ1.ampDAP:M0026:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF2.ampDAP/M0027/AthalianaCistrome XX ID CBF2.ampDAP:M0027:AthalianaCistrome XX NA CBF2.ampDAP XX DE CBF2.ampDAP XX OS Arabidopsis thaliana XX BF 7500; XX P0 A C G T 01 133 141 87 238 t 02 50 132 194 223 k 03 598 0 0 1 A 04 2 3 3 591 T 05 0 0 599 0 G 06 0 0 0 599 T 07 0 599 0 0 C 08 0 0 599 0 G 09 0 0 599 0 G 10 0 301 0 298 y 11 313 103 164 19 r 12 317 57 179 46 r 13 221 118 133 127 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF2.ampDAP:M0027:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G12630.ampDAP/M0028/AthalianaCistrome XX ID AT1G12630.ampDAP:M0028:AthalianaCistrome XX NA AT1G12630.ampDAP XX DE AT1G12630.ampDAP XX OS Arabidopsis thaliana XX BF 12259; XX P0 A C G T 01 146 96 196 160 k 02 202 105 114 177 w 03 186 120 81 211 w 04 213 62 95 228 w 05 117 84 146 251 t 06 7 51 2 538 T 07 0 0 598 0 G 08 17 0 1 580 T 09 0 598 0 0 C 10 0 0 598 0 G 11 3 0 595 0 G 12 0 410 1 187 Y 13 399 38 143 18 a 14 311 34 205 48 r 15 270 137 104 87 a 16 183 99 172 144 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G12630.ampDAP:M0028:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF115.ampDAP/M0030/AthalianaCistrome XX ID ERF115.ampDAP:M0030:AthalianaCistrome XX NA ERF115.ampDAP XX DE ERF115.ampDAP XX OS Arabidopsis thaliana XX BF 12398; XX P0 A C G T 01 137 60 339 62 g 02 170 251 39 138 m 03 197 41 221 139 r 04 281 10 223 84 r 05 82 157 9 350 y 06 59 3 337 199 k 07 176 9 397 16 r 08 0 593 0 5 C 09 0 0 588 10 G 10 0 0 598 0 G 11 3 586 0 9 C 12 8 5 521 64 G 13 45 117 422 14 G 14 191 303 25 79 m 15 74 26 405 93 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF115.ampDAP:M0030:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR3.ampDAP/M0031/AthalianaCistrome XX ID DEAR3.ampDAP:M0031:AthalianaCistrome XX NA DEAR3.ampDAP XX DE DEAR3.ampDAP XX OS Arabidopsis thaliana XX BF 5573; XX P0 A C G T 01 242 67 111 177 w 02 246 4 83 264 w 03 14 1 131 451 T 04 0 0 597 0 G 05 4 0 0 593 T 06 0 597 0 0 C 07 0 0 597 0 G 08 0 0 597 0 G 09 0 25 0 572 T 10 0 5 585 7 G 11 234 122 184 57 r 12 160 151 81 205 h 13 160 88 161 188 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR3.ampDAP:M0031:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF13.ampDAP/M0032/AthalianaCistrome XX ID ERF13.ampDAP:M0032:AthalianaCistrome XX NA ERF13.ampDAP XX DE ERF13.ampDAP XX OS Arabidopsis thaliana XX BF 2589; XX P0 A C G T 01 181 169 61 167 h 02 242 54 133 149 w 03 303 49 156 70 r 04 100 201 6 271 y 05 3 0 575 0 G 06 51 0 484 43 G 07 1 577 0 0 C 08 0 0 573 5 G 09 2 0 576 0 G 10 0 577 0 1 C 11 5 31 307 235 k 12 155 111 288 24 r 13 216 156 64 142 m 14 127 58 255 138 g 15 135 78 268 97 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF13.ampDAP:M0032:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF4.ampDAP/M0033/AthalianaCistrome XX ID ERF4.ampDAP:M0033:AthalianaCistrome XX NA ERF4.ampDAP XX DE ERF4.ampDAP XX OS Arabidopsis thaliana XX BF 7507; XX P0 A C G T 01 149 92 233 108 r 02 194 88 203 97 r 03 242 111 65 164 w 04 246 28 110 198 w 05 299 24 122 137 a 06 71 153 4 354 y 07 20 1 516 45 G 08 156 0 406 20 R 09 1 581 0 0 C 10 0 0 582 0 G 11 1 0 581 0 G 12 0 582 0 0 C 13 0 0 538 44 G 14 45 145 342 50 g 15 228 153 76 125 m 16 135 39 309 99 g 17 175 90 231 86 r 18 163 139 110 170 w 19 175 52 248 107 r 20 164 116 191 111 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF4.ampDAP:M0033:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABR1.ampDAP/M0034/AthalianaCistrome XX ID ABR1.ampDAP:M0034:AthalianaCistrome XX NA ABR1.ampDAP XX DE ABR1.ampDAP XX OS Arabidopsis thaliana XX BF 12217; XX P0 A C G T 01 149 205 64 165 h 02 183 102 128 170 w 03 89 235 103 156 y 04 118 302 47 116 c 05 111 69 205 198 k 06 26 374 126 57 c 07 110 468 5 0 C 08 0 0 583 0 G 09 0 583 0 0 C 10 0 583 0 0 C 11 1 0 582 0 G 12 26 449 5 103 C 13 237 319 0 27 m 14 435 0 78 70 A 15 120 82 3 378 t 16 149 120 30 284 w 17 124 82 115 262 t 18 74 224 85 200 y 19 127 224 99 133 c 20 146 123 185 129 r 21 124 207 98 154 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABR1.ampDAP:M0034:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G28160.ampDAP/M0035/AthalianaCistrome XX ID AT1G28160.ampDAP:M0035:AthalianaCistrome XX NA AT1G28160.ampDAP XX DE AT1G28160.ampDAP XX OS Arabidopsis thaliana XX BF 12265; XX P0 A C G T 01 107 324 48 113 c 02 177 50 234 131 r 03 62 306 71 153 y 04 46 465 7 74 C 05 91 4 327 170 k 06 14 447 105 26 C 07 11 581 0 0 C 08 27 0 550 15 G 09 0 592 0 0 C 10 2 590 0 0 C 11 7 0 585 0 G 12 6 381 6 199 y 13 64 428 16 84 C 14 255 0 243 94 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G28160.ampDAP:M0035:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G60490.ampDAP/M0036/AthalianaCistrome XX ID AT3G60490.ampDAP:M0036:AthalianaCistrome XX NA AT3G60490.ampDAP XX DE AT3G60490.ampDAP XX OS Arabidopsis thaliana XX BF 12298; XX P0 A C G T 01 210 82 175 130 r 02 202 98 147 150 w 03 216 87 90 204 w 04 255 27 88 227 w 05 89 64 214 230 k 06 0 14 0 583 T 07 0 0 597 0 G 08 0 0 0 597 T 09 0 597 0 0 C 10 0 0 597 0 G 11 0 0 597 0 G 12 0 47 0 550 T 13 28 9 550 10 G 14 130 90 347 30 g 15 196 151 87 163 h 16 170 81 177 169 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G60490.ampDAP:M0036:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF11.DAP/M0039/AthalianaCistrome XX ID ERF11.DAP:M0039:AthalianaCistrome XX NA ERF11.DAP XX DE ERF11.DAP XX OS Arabidopsis thaliana XX BF 10415; XX P0 A C G T 01 78 304 80 134 c 02 118 316 38 124 c 03 190 78 144 184 w 04 49 326 74 147 c 05 53 501 4 38 C 06 83 3 319 191 k 07 4 524 54 14 C 08 11 584 1 0 C 09 25 0 571 0 G 10 0 574 9 13 C 11 0 596 0 0 C 12 39 0 541 16 G 13 7 351 8 230 y 14 113 353 24 106 c 15 315 20 137 124 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF11.DAP:M0039:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF3.ampDAP/M0041/AthalianaCistrome XX ID CBF3.ampDAP:M0041:AthalianaCistrome XX NA CBF3.ampDAP XX DE CBF3.ampDAP XX OS Arabidopsis thaliana XX BF 7498; XX P0 A C G T 01 79 120 192 207 k 02 460 11 46 81 A 03 39 57 42 460 T 04 0 0 598 0 G 05 0 0 0 598 T 06 0 598 0 0 C 07 0 0 598 0 G 08 7 0 591 0 G 09 0 280 0 318 y 10 238 112 198 50 r 11 290 45 186 77 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF3.ampDAP:M0041:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF8.DAP/M0044/AthalianaCistrome XX ID ERF8.DAP:M0044:AthalianaCistrome XX NA ERF8.DAP XX DE ERF8.DAP XX OS Arabidopsis thaliana XX BF 10416; XX P0 A C G T 01 125 108 176 180 k 02 67 303 71 148 y 03 104 355 23 107 c 04 174 64 156 195 d 05 54 336 58 141 c 06 55 492 7 35 C 07 84 0 349 156 k 08 10 545 32 2 C 09 1 587 1 0 C 10 14 0 570 5 G 11 0 555 0 34 C 12 2 587 0 0 C 13 81 0 508 0 G 14 31 314 33 211 y 15 149 274 39 127 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF8.DAP:M0044:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF10.DAP/M0045/AthalianaCistrome XX ID CRF10.DAP:M0045:AthalianaCistrome XX NA CRF10.DAP XX DE CRF10.DAP XX OS Arabidopsis thaliana XX BF 12385; XX P0 A C G T 01 63 345 70 122 c 02 92 361 38 109 c 03 166 68 209 157 d 04 45 362 57 136 c 05 66 485 8 41 C 06 79 7 319 195 k 07 4 547 38 11 C 08 15 578 7 0 C 09 46 0 553 1 G 10 0 590 0 10 C 11 0 600 0 0 C 12 33 0 549 18 G 13 1 432 6 161 Y 14 120 289 58 133 c 15 255 37 182 126 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF10.DAP:M0045:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF8.ampDAP/M0046/AthalianaCistrome XX ID ERF8.ampDAP:M0046:AthalianaCistrome XX NA ERF8.ampDAP XX DE ERF8.ampDAP XX OS Arabidopsis thaliana XX BF 10416; XX P0 A C G T 01 201 90 180 117 r 02 256 104 66 162 w 03 257 34 102 195 w 04 292 30 110 156 w 05 68 160 0 360 y 06 19 0 499 70 G 07 146 3 414 25 G 08 0 588 0 0 C 09 0 0 585 3 G 10 0 0 588 0 G 11 1 582 0 5 C 12 3 0 517 68 G 13 73 135 319 61 g 14 212 165 60 151 h 15 144 37 279 128 g 16 179 95 200 114 r 17 151 139 114 184 w 18 167 57 209 155 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF8.ampDAP:M0046:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF4.DAP/M0047/AthalianaCistrome XX ID ERF4.DAP:M0047:AthalianaCistrome XX NA ERF4.DAP XX DE ERF4.DAP XX OS Arabidopsis thaliana XX BF 7507; XX P0 A C G T 01 73 288 74 162 y 02 79 407 21 90 C 03 112 53 195 237 k 04 19 454 103 21 C 05 12 583 0 2 C 06 3 0 591 3 G 07 0 596 1 0 C 08 1 595 0 1 C 09 1 0 596 0 G 10 6 463 0 128 C 11 52 531 2 12 C 12 353 3 170 71 r 13 130 182 25 260 y 14 202 153 26 216 h 15 172 71 123 231 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF4.DAP:M0047:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g44940.ampDAP/M0052/AthalianaCistrome XX ID At2g44940.ampDAP:M0052:AthalianaCistrome XX NA At2g44940.ampDAP XX DE At2g44940.ampDAP XX OS Arabidopsis thaliana XX BF 12346; XX P0 A C G T 01 234 59 124 177 w 02 111 86 196 201 k 03 15 48 1 530 T 04 0 0 594 0 G 05 2 0 0 592 T 06 0 594 0 0 C 07 0 0 594 0 G 08 0 0 594 0 G 09 0 91 0 503 T 10 58 25 477 34 G 11 183 93 275 43 r 12 205 161 71 157 h 13 158 100 200 136 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g44940.ampDAP:M0052:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBF3.DAP/M0053/AthalianaCistrome XX ID CBF3.DAP:M0053:AthalianaCistrome XX NA CBF3.DAP XX DE CBF3.DAP XX OS Arabidopsis thaliana XX BF 7498; XX P0 A C G T 01 148 211 61 177 y 02 152 96 143 206 w 03 75 193 69 260 y 04 69 266 90 172 y 05 310 0 284 3 r 06 0 585 0 12 C 07 0 597 0 0 C 08 0 0 597 0 G 09 597 0 0 0 A 10 0 597 0 0 C 11 344 59 110 84 a 12 163 72 27 335 w 13 201 173 116 107 m 14 209 96 162 130 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBF3.DAP:M0053:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Rap210.ampDAP/M0054/AthalianaCistrome XX ID Rap210.ampDAP:M0054:AthalianaCistrome XX NA Rap210.ampDAP XX DE Rap210.ampDAP XX OS Arabidopsis thaliana XX BF 2596; XX P0 A C G T 01 183 76 114 223 w 02 114 92 149 241 k 03 13 63 3 517 T 04 0 0 596 0 G 05 0 0 1 595 T 06 0 596 0 0 C 07 0 0 596 0 G 08 45 0 551 0 G 09 0 404 0 192 y 10 272 88 152 84 r 11 257 44 215 80 r 12 255 145 85 111 a 13 180 113 156 147 r 14 214 87 157 138 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Rap210.ampDAP:M0054:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g22810.ampDAP/M0056/AthalianaCistrome XX ID At1g22810.ampDAP:M0056:AthalianaCistrome XX NA At1g22810.ampDAP XX DE At1g22810.ampDAP XX OS Arabidopsis thaliana XX BF 12332; XX P0 A C G T 01 115 279 72 130 c 02 164 58 196 178 d 03 38 315 86 157 y 04 18 566 2 10 C 05 538 0 58 0 A 06 0 596 0 0 C 07 0 596 0 0 C 08 0 0 596 0 G 09 475 76 3 42 A 10 0 596 0 0 C 11 442 54 79 21 A 12 191 214 54 137 m 13 175 172 91 158 h 14 170 103 175 148 r 15 164 197 114 121 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g22810.ampDAP:M0056:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RRTF1.DAP/M0057/AthalianaCistrome XX ID RRTF1.DAP:M0057:AthalianaCistrome XX NA RRTF1.DAP XX DE RRTF1.DAP XX OS Arabidopsis thaliana XX BF 8891; XX P0 A C G T 01 185 99 233 83 r 02 252 109 100 139 a 03 277 49 132 142 a 04 386 6 101 107 a 05 147 42 5 406 t 06 105 5 236 254 k 07 219 31 315 35 r 08 1 595 0 4 C 09 0 0 598 2 G 10 0 0 600 0 G 11 1 599 0 0 C 12 1 1 565 33 G 13 22 166 389 23 s 14 172 312 39 77 m 15 85 42 390 83 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RRTF1.DAP:M0057:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g31060.ampDAP/M0058/AthalianaCistrome XX ID At4g31060.ampDAP:M0058:AthalianaCistrome XX NA At4g31060.ampDAP XX DE At4g31060.ampDAP XX OS Arabidopsis thaliana XX BF 12357; XX P0 A C G T 01 197 91 155 146 r 02 188 125 85 191 w 03 182 70 110 227 w 04 122 97 123 247 t 05 31 118 2 438 T 06 0 0 589 0 G 07 59 0 47 483 T 08 0 589 0 0 C 09 0 0 589 0 G 10 0 0 589 0 G 11 0 82 0 507 T 12 40 5 522 22 G 13 227 68 228 66 r 14 198 149 61 181 h 15 140 65 217 167 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g31060.ampDAP:M0058:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ESE3.ampDAP/M0061/AthalianaCistrome XX ID ESE3.ampDAP:M0061:AthalianaCistrome XX NA ESE3.ampDAP XX DE ESE3.ampDAP XX OS Arabidopsis thaliana XX BF 12402; XX P0 A C G T 01 132 35 276 157 k 02 133 158 38 271 y 03 135 14 320 131 g 04 156 25 366 53 r 05 0 583 0 17 C 06 0 0 597 3 G 07 3 2 595 0 G 08 5 455 0 140 C 09 0 0 593 7 G 10 9 63 517 11 G 11 250 251 8 91 m 12 65 11 485 39 G 13 142 71 339 48 g 14 222 144 52 182 w 15 112 34 331 123 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ESE3.ampDAP:M0061:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF7.ampDAP/M0063/AthalianaCistrome XX ID ERF7.ampDAP:M0063:AthalianaCistrome XX NA ERF7.ampDAP XX DE ERF7.ampDAP XX OS Arabidopsis thaliana XX BF 2877; XX P0 A C G T 01 315 23 120 121 a 02 59 164 7 349 y 03 2 0 537 40 G 04 103 1 469 6 G 05 0 579 0 0 C 06 0 0 579 0 G 07 0 2 576 1 G 08 1 577 0 1 C 09 0 7 481 91 G 10 65 119 365 30 g 11 219 172 69 119 m 12 151 33 301 94 r 13 143 71 285 80 g 14 150 162 98 169 h 15 149 55 261 114 r 16 160 83 232 104 r 17 134 188 101 156 y 18 159 72 231 117 r 19 160 90 242 87 r 20 178 142 115 144 a 21 152 98 205 124 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF7.ampDAP:M0063:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G71450.ampDAP/M0064/AthalianaCistrome XX ID AT1G71450.ampDAP:M0064:AthalianaCistrome XX NA AT1G71450.ampDAP XX DE AT1G71450.ampDAP XX OS Arabidopsis thaliana XX BF 12271; XX P0 A C G T 01 98 203 85 171 y 02 119 283 26 129 c 03 166 70 154 167 d 04 83 206 70 198 y 05 43 441 0 73 C 06 342 0 164 51 r 07 0 557 0 0 C 08 0 557 0 0 C 09 18 0 539 0 G 10 180 121 11 245 w 11 2 525 0 30 C 12 286 27 153 91 r 13 151 191 41 174 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G71450.ampDAP:M0064:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR2.DAP/M0065/AthalianaCistrome XX ID DEAR2.DAP:M0065:AthalianaCistrome XX NA DEAR2.DAP XX DE DEAR2.DAP XX OS Arabidopsis thaliana XX BF 12389; XX P0 A C G T 01 85 289 70 156 y 02 98 297 69 136 c 03 201 93 162 144 r 04 105 269 56 170 y 05 121 337 40 102 c 06 182 32 201 185 d 07 49 346 46 159 y 08 27 570 2 1 C 09 496 0 104 0 A 10 0 599 0 1 C 11 1 599 0 0 C 12 4 0 596 0 G 13 337 156 3 104 m 14 3 594 3 0 C 15 371 64 85 80 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR2.DAP:M0065:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RRTF1.ampDAP/M0066/AthalianaCistrome XX ID RRTF1.ampDAP:M0066:AthalianaCistrome XX NA RRTF1.ampDAP XX DE RRTF1.ampDAP XX OS Arabidopsis thaliana XX BF 8891; XX P0 A C G T 01 149 87 206 136 r 02 174 105 207 92 r 03 276 104 93 105 a 04 301 31 140 106 a 05 441 0 62 75 A 06 152 13 2 411 W 07 111 0 204 263 k 08 202 14 328 34 r 09 0 578 0 0 C 10 0 0 576 2 G 11 0 0 578 0 G 12 0 578 0 0 C 13 0 0 523 55 G 14 23 173 352 30 s 15 184 256 50 88 m 16 115 55 302 106 g 17 164 100 196 118 r 18 164 131 86 197 w 19 173 67 180 158 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RRTF1.ampDAP:M0066:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g36060.ampDAP/M0067/AthalianaCistrome XX ID At1g36060.ampDAP:M0067:AthalianaCistrome XX NA At1g36060.ampDAP XX DE At1g36060.ampDAP XX OS Arabidopsis thaliana XX BF 12333; XX P0 A C G T 01 106 233 84 177 y 02 136 291 29 144 c 03 149 61 172 218 k 04 74 323 73 130 c 05 58 507 19 16 C 06 451 1 148 0 A 07 3 596 0 1 C 08 1 598 1 0 C 09 0 1 597 2 G 10 292 126 20 162 w 11 6 593 0 1 C 12 228 306 18 48 m 13 315 110 23 152 w 14 184 132 26 258 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g36060.ampDAP:M0067:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF3.DAP/M0069/AthalianaCistrome XX ID ERF3.DAP:M0069:AthalianaCistrome XX NA ERF3.DAP XX DE ERF3.DAP XX OS Arabidopsis thaliana XX BF 7506; XX P0 A C G T 01 125 150 15 306 y 02 104 17 370 105 g 03 238 2 346 10 r 04 8 569 0 19 C 05 0 0 596 0 G 06 4 9 582 1 G 07 0 560 0 36 C 08 1 0 568 27 G 09 27 60 503 6 G 10 185 333 9 69 m 11 35 18 502 41 G 12 154 63 318 61 r 13 180 164 67 185 h 14 115 45 303 133 g 15 136 63 319 78 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF3.DAP:M0069:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF11.ampDAP/M0072/AthalianaCistrome XX ID ERF11.ampDAP:M0072:AthalianaCistrome XX NA ERF11.ampDAP XX DE ERF11.ampDAP XX OS Arabidopsis thaliana XX BF 10415; XX P0 A C G T 01 156 76 216 121 r 02 187 74 209 99 r 03 209 124 79 157 w 04 234 44 123 168 w 05 281 36 138 114 a 06 75 147 0 347 y 07 30 0 466 73 G 08 158 3 383 25 r 09 0 569 0 0 C 10 0 0 568 1 G 11 0 0 569 0 G 12 0 568 0 1 C 13 5 0 508 56 G 14 54 123 349 43 g 15 171 193 53 152 h 16 106 32 326 105 g 17 154 80 244 91 r 18 191 150 90 138 m 19 161 60 223 125 r 20 175 91 190 113 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF11.ampDAP:M0072:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF3.ampDAP/M0074/AthalianaCistrome XX ID ERF3.ampDAP:M0074:AthalianaCistrome XX NA ERF3.ampDAP XX DE ERF3.ampDAP XX OS Arabidopsis thaliana XX BF 7506; XX P0 A C G T 01 87 164 9 307 y 02 58 9 399 101 G 03 182 5 376 4 r 04 0 557 0 10 C 05 0 0 567 0 G 06 2 2 563 0 G 07 2 556 0 9 C 08 0 0 504 63 G 09 51 87 398 31 G 10 205 214 34 114 m 11 104 16 370 77 g 12 163 74 241 89 r 13 143 177 72 175 h 14 114 47 293 113 g 15 141 76 266 84 g 16 146 215 54 152 h 17 114 62 293 98 g 18 158 65 257 87 r 19 133 196 95 143 y 20 126 78 251 112 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF3.ampDAP:M0074:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AIL7.ampDAP/M0075/AthalianaCistrome XX ID AIL7.ampDAP:M0075:AthalianaCistrome XX NA AIL7.ampDAP XX DE AIL7.ampDAP XX OS Arabidopsis thaliana XX BF 5610; XX P0 A C G T 01 351 51 95 103 a 02 22 542 11 25 C 03 209 22 327 42 r 04 286 87 128 99 a 05 263 41 35 261 w 06 95 41 12 452 T 07 104 304 4 188 y 08 16 349 0 235 y 09 1 598 0 1 C 10 145 33 381 41 g 11 599 0 1 0 A 12 23 6 440 131 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AIL7.ampDAP:M0075:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PUCHI.ampDAP/M0076/AthalianaCistrome XX ID PUCHI.ampDAP:M0076:AthalianaCistrome XX NA PUCHI.ampDAP XX DE PUCHI.ampDAP XX OS Arabidopsis thaliana XX BF 12503; XX P0 A C G T 01 123 79 289 94 g 02 124 238 114 109 c 03 89 88 298 110 g 04 149 63 293 80 r 05 156 233 71 125 m 06 165 48 220 152 d 07 161 25 232 167 d 08 152 128 21 284 w 09 147 17 285 136 r 10 245 30 276 34 r 11 0 584 0 1 C 12 0 2 579 4 G 13 8 8 568 1 G 14 4 573 0 8 C 15 1 0 583 1 G 16 16 128 426 15 G 17 172 336 12 65 m 18 68 16 455 46 G 19 138 72 282 93 g 20 164 181 66 174 h 21 133 54 268 130 g 22 149 100 240 96 r 23 167 156 132 130 m 24 139 88 253 105 g 25 139 86 248 112 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PUCHI.ampDAP:M0076:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF4.ampDAP/M0079/AthalianaCistrome XX ID CRF4.ampDAP:M0079:AthalianaCistrome XX NA CRF4.ampDAP XX DE CRF4.ampDAP XX OS Arabidopsis thaliana XX BF 10425; XX P0 A C G T 01 138 192 19 251 y 02 102 36 382 80 g 03 158 1 420 21 R 04 14 447 0 139 C 05 8 0 585 7 G 06 10 4 586 0 G 07 4 561 0 35 C 08 0 0 600 0 G 09 1 33 566 0 G 10 100 460 0 40 C 11 17 9 530 44 G 12 105 72 388 35 g 13 181 219 48 152 h 14 92 22 405 81 g 15 133 49 362 56 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF4.ampDAP:M0079:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF115.DAP/M0081/AthalianaCistrome XX ID ERF115.DAP:M0081:AthalianaCistrome XX NA ERF115.DAP XX DE ERF115.DAP XX OS Arabidopsis thaliana XX BF 12398; XX P0 A C G T 01 16 461 67 55 C 02 49 527 8 15 C 03 65 0 497 37 G 04 8 556 25 10 C 05 14 585 0 0 C 06 50 0 532 17 G 07 5 426 8 160 Y 08 131 406 5 57 c 09 251 7 244 97 r 10 47 350 15 187 y 11 115 368 20 96 c 12 112 10 345 132 g 13 30 449 14 106 C 14 57 436 33 73 C 15 127 37 360 75 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF115.DAP:M0081:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1.DAP/M0083/AthalianaCistrome XX ID DDF1.DAP:M0083:AthalianaCistrome XX NA DDF1.DAP XX DE DDF1.DAP XX OS Arabidopsis thaliana XX BF 8873; XX P0 A C G T 01 154 175 77 194 h 02 81 147 235 137 g 03 468 9 72 51 A 04 31 68 20 481 T 05 0 0 600 0 G 06 1 0 0 599 T 07 0 600 0 0 C 08 0 0 600 0 G 09 175 1 424 0 R 10 0 455 0 145 C 11 222 68 236 74 r 12 265 71 175 89 r 13 168 177 119 136 m 14 153 71 248 128 r 15 191 90 184 135 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1.DAP:M0083:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP21.ampDAP/M0086/AthalianaCistrome XX ID RAP21.ampDAP:M0086:AthalianaCistrome XX NA RAP21.ampDAP XX DE RAP21.ampDAP XX OS Arabidopsis thaliana XX BF 2585; XX P0 A C G T 01 130 194 83 175 y 02 126 260 61 135 c 03 152 70 175 185 d 04 64 259 87 172 y 05 29 526 8 19 C 06 439 0 143 0 A 07 0 582 0 0 C 08 0 582 0 0 C 09 0 0 582 0 G 10 455 92 1 34 A 11 0 582 0 0 C 12 403 81 54 44 A 13 192 123 36 231 w 14 167 156 72 187 h 15 170 63 160 189 d 16 145 198 96 143 c 17 126 237 88 131 c 18 171 141 137 133 a 19 137 186 86 173 y 20 119 212 90 161 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP21.ampDAP:M0086:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g75490.ampDAP/M0087/AthalianaCistrome XX ID At1g75490.ampDAP:M0087:AthalianaCistrome XX NA At1g75490.ampDAP XX DE At1g75490.ampDAP XX OS Arabidopsis thaliana XX BF 10418; XX P0 A C G T 01 132 221 62 164 y 02 198 90 140 151 w 03 102 221 81 175 y 04 96 278 58 147 y 05 128 45 181 225 k 06 46 332 69 132 c 07 56 504 11 8 C 08 505 0 74 0 A 09 0 579 0 0 C 10 0 578 0 1 C 11 0 0 579 0 G 12 221 243 9 106 m 13 67 361 21 130 c 14 255 62 67 195 w 15 166 210 75 128 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g75490.ampDAP:M0087:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g32800.ampDAP/M0088/AthalianaCistrome XX ID At4g32800.ampDAP:M0088:AthalianaCistrome XX NA At4g32800.ampDAP XX DE At4g32800.ampDAP XX OS Arabidopsis thaliana XX BF 2594; XX P0 A C G T 01 200 82 162 150 d 02 201 98 138 157 w 03 214 79 81 220 w 04 228 29 96 241 w 05 90 81 195 228 k 06 3 24 0 567 T 07 0 0 594 0 G 08 0 0 0 594 T 09 0 594 0 0 C 10 0 0 594 0 G 11 0 0 594 0 G 12 0 69 0 525 T 13 40 18 501 35 G 14 153 77 317 47 r 15 203 144 91 156 w 16 165 80 174 175 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g32800.ampDAP:M0088:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g65130.DAP/M0090/AthalianaCistrome XX ID At5g65130.DAP:M0090:AthalianaCistrome XX NA At5g65130.DAP XX DE At5g65130.DAP XX OS Arabidopsis thaliana XX BF 12367; XX P0 A C G T 01 49 368 50 111 c 02 81 391 22 84 c 03 212 67 157 142 r 04 22 371 44 141 c 05 42 464 18 54 C 06 156 2 225 195 d 07 20 498 26 34 C 08 1 568 7 2 C 09 237 1 334 6 r 10 3 575 0 0 C 11 0 578 0 0 C 12 52 2 505 19 G 13 71 401 7 99 C 14 30 495 0 53 C 15 279 75 109 115 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g65130.DAP:M0090:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF10.ampDAP/M0091/AthalianaCistrome XX ID ERF10.ampDAP:M0091:AthalianaCistrome XX NA ERF10.ampDAP XX DE ERF10.ampDAP XX OS Arabidopsis thaliana XX BF 12397; XX P0 A C G T 01 135 181 123 126 c 02 126 107 203 129 g 03 149 93 214 109 r 04 148 174 96 147 h 05 153 73 224 115 r 06 194 80 202 89 r 07 212 105 58 190 w 08 247 31 123 164 w 09 254 37 183 91 r 10 58 132 4 371 t 11 2 0 507 56 G 12 42 0 513 10 G 13 0 565 0 0 C 14 0 0 565 0 G 15 0 0 565 0 G 16 1 564 0 0 C 17 1 0 549 15 G 18 39 138 362 26 g 19 219 162 35 149 h 20 141 26 247 151 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF10.ampDAP:M0091:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF2.ampDAP/M0093/AthalianaCistrome XX ID ERF2.ampDAP:M0093:AthalianaCistrome XX NA ERF2.ampDAP XX DE ERF2.ampDAP XX OS Arabidopsis thaliana XX BF 2867; XX P0 A C G T 01 97 281 107 100 c 02 124 224 93 144 c 03 135 93 199 158 k 04 94 260 88 143 c 05 115 262 75 133 c 06 120 99 231 135 g 07 82 293 90 120 c 08 120 276 57 132 c 09 181 80 206 118 r 10 94 269 87 135 c 11 119 310 31 125 c 12 140 46 192 207 k 13 23 366 111 85 c 14 145 418 18 4 C 15 4 0 579 2 G 16 0 585 0 0 C 17 5 580 0 0 C 18 24 0 555 6 G 19 0 534 4 47 C 20 3 579 0 3 C 21 254 6 236 89 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF2.ampDAP:M0093:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF9.ampDAP/M0096/AthalianaCistrome XX ID ERF9.ampDAP:M0096:AthalianaCistrome XX NA ERF9.ampDAP XX DE ERF9.ampDAP XX OS Arabidopsis thaliana XX BF 12400; XX P0 A C G T 01 165 84 156 167 d 02 77 257 84 154 y 03 98 316 32 126 c 04 117 57 184 214 k 05 29 375 141 27 c 06 31 537 4 0 C 07 1 0 571 0 G 08 0 572 0 0 C 09 0 572 0 0 C 10 0 0 572 0 G 11 12 420 0 140 C 12 42 523 0 7 C 13 379 1 107 85 a 14 136 112 20 304 t 15 189 86 23 274 w 16 154 70 92 256 w 17 83 203 74 212 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF9.ampDAP:M0096:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF5.ampDAP/M0101/AthalianaCistrome XX ID ERF5.ampDAP:M0101:AthalianaCistrome XX NA ERF5.ampDAP XX DE ERF5.ampDAP XX OS Arabidopsis thaliana XX BF 1971; XX P0 A C G T 01 87 279 89 112 c 02 103 299 35 130 c 03 124 70 192 181 k 04 27 328 108 104 c 05 103 451 11 2 C 06 6 0 557 4 G 07 1 557 9 0 C 08 0 567 0 0 C 09 10 0 555 2 G 10 2 508 4 53 C 11 0 566 0 1 C 12 233 1 292 41 r 13 58 302 38 169 y 14 145 226 56 140 m 15 194 44 208 121 r 16 105 277 72 113 c 17 124 271 40 132 c 18 147 60 234 126 r 19 87 255 100 125 c 20 105 277 72 113 c 21 112 108 250 97 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF5.ampDAP:M0101:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB2.ampDAP/M0102/AthalianaCistrome XX ID DREB2.ampDAP:M0102:AthalianaCistrome XX NA DREB2.ampDAP XX DE DREB2.ampDAP XX OS Arabidopsis thaliana XX BF 3092; XX P0 A C G T 01 146 160 81 180 h 02 162 185 42 178 h 03 139 77 111 240 t 04 151 195 67 154 h 05 228 310 21 8 m 06 513 0 54 0 A 07 0 566 0 1 C 08 0 567 0 0 C 09 1 0 566 0 G 10 389 177 0 1 M 11 0 567 0 0 C 12 383 3 11 170 w 13 31 22 8 506 T 14 333 30 17 187 w 15 270 59 126 112 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB2.ampDAP:M0102:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF1.DAP/M0104/AthalianaCistrome XX ID ERF1.DAP:M0104:AthalianaCistrome XX NA ERF1.DAP XX DE ERF1.DAP XX OS Arabidopsis thaliana XX BF 4198; XX P0 A C G T 01 119 246 88 128 c 02 128 208 69 176 y 03 138 126 164 153 k 04 105 243 84 149 y 05 146 261 48 126 m 06 168 30 143 240 w 07 63 258 56 204 y 08 265 315 1 0 m 09 0 0 577 4 G 10 0 580 0 1 C 11 0 579 0 2 C 12 0 0 581 0 G 13 0 581 0 0 C 14 2 578 0 1 C 15 257 7 244 73 r 16 19 300 51 211 y 17 122 231 46 182 y 18 218 42 188 133 r 19 143 215 80 143 c 20 158 200 68 155 h 21 186 59 198 138 r 22 121 222 104 134 c 23 121 215 84 161 y 24 140 130 191 120 g 25 122 205 80 174 y 26 131 228 92 130 c 27 142 106 178 155 k 28 123 199 108 151 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF1.DAP:M0104:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g65130.ampDAP/M0106/AthalianaCistrome XX ID At5g65130.ampDAP:M0106:AthalianaCistrome XX NA At5g65130.ampDAP XX DE At5g65130.ampDAP XX OS Arabidopsis thaliana XX BF 12367; XX P0 A C G T 01 118 219 89 149 y 02 104 237 93 141 c 03 166 127 134 148 w 04 112 221 83 159 y 05 137 205 70 163 y 06 182 96 139 158 w 07 116 223 83 153 y 08 127 260 55 133 c 09 128 63 184 200 k 10 15 371 135 54 c 11 13 561 0 1 C 12 319 0 256 0 r 13 1 574 0 0 C 14 0 575 0 0 C 15 1 2 572 0 G 16 348 196 0 31 m 17 0 575 0 0 C 18 300 186 22 67 m 19 265 85 9 216 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g65130.ampDAP:M0106:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF10.ampDAP/M0114/AthalianaCistrome XX ID CRF10.ampDAP:M0114:AthalianaCistrome XX NA CRF10.ampDAP XX DE CRF10.ampDAP XX OS Arabidopsis thaliana XX BF 12385; XX P0 A C G T 01 168 43 91 126 w 02 120 92 71 145 w 03 192 63 118 55 r 04 0 0 428 0 G 05 403 5 6 14 A 06 428 0 0 0 A 07 0 0 0 428 T 08 13 410 2 3 C 09 89 67 14 258 t 10 148 64 59 157 w 11 199 37 82 110 w 12 30 3 367 28 G 13 402 2 22 2 A 14 4 2 0 422 T 15 118 115 24 171 h 16 3 406 0 19 C 17 70 138 56 164 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF10.ampDAP:M0114:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF73.DAP/M0117/AthalianaCistrome XX ID ERF73.DAP:M0117:AthalianaCistrome XX NA ERF73.DAP XX DE ERF73.DAP XX OS Arabidopsis thaliana XX BF 17720; XX P0 A C G T 01 88 248 83 144 y 02 118 267 51 127 c 03 175 71 162 155 d 04 65 270 75 153 y 05 102 365 16 80 c 06 95 50 212 206 k 07 19 418 87 39 C 08 14 549 0 0 C 09 18 0 545 0 G 10 0 559 0 4 C 11 0 563 0 0 C 12 7 0 549 7 G 13 0 534 0 29 C 14 53 471 8 31 C 15 285 0 214 64 r 16 68 216 47 232 y 17 155 165 35 208 h 18 158 43 149 213 d 19 85 236 61 181 y 20 136 231 65 131 c 21 147 100 182 134 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF73.DAP:M0117:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g28140.ampDAP/M0120/AthalianaCistrome XX ID At4g28140.ampDAP:M0120:AthalianaCistrome XX NA At4g28140.ampDAP XX DE At4g28140.ampDAP XX OS Arabidopsis thaliana XX BF 12356; XX P0 A C G T 01 15 40 254 216 k 02 3 0 522 0 G 03 125 12 120 268 t 04 0 521 2 2 C 05 0 0 525 0 G 06 0 0 525 0 G 07 0 152 0 373 Y 08 18 9 480 18 G 09 80 81 331 33 g 10 182 177 42 124 m 11 112 36 276 101 g 12 167 75 210 73 r 13 118 156 95 156 y 14 114 87 229 95 g 15 129 71 213 112 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g28140.ampDAP:M0120:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF6.DAP/M0122/AthalianaCistrome XX ID ERF6.DAP:M0122:AthalianaCistrome XX NA ERF6.DAP XX DE ERF6.DAP XX OS Arabidopsis thaliana XX BF 5590; XX P0 A C G T 01 84 267 71 91 c 02 98 244 52 119 c 03 136 75 157 145 d 04 69 255 54 135 y 05 95 317 15 86 c 06 101 43 192 177 k 07 11 367 84 51 C 08 39 471 3 0 C 09 5 0 507 1 G 10 0 512 1 0 C 11 0 513 0 0 C 12 6 0 507 0 G 13 0 497 0 16 C 14 0 513 0 0 C 15 210 2 255 46 r 16 49 279 49 136 y 17 129 214 43 127 m 18 200 35 152 126 r 19 93 240 62 118 c 20 129 223 43 118 m 21 125 78 184 126 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF6.DAP:M0122:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PLT1.ampDAP/M0125/AthalianaCistrome XX ID PLT1.ampDAP:M0125:AthalianaCistrome XX NA PLT1.ampDAP XX DE PLT1.ampDAP XX OS Arabidopsis thaliana XX BF 5581; XX P0 A C G T 01 107 15 213 152 k 02 22 350 8 107 C 03 235 48 109 95 a 04 49 371 24 43 C 05 151 33 261 42 r 06 220 88 91 88 a 07 213 29 43 202 w 08 75 38 24 350 T 09 79 268 5 135 y 10 15 262 0 210 y 11 19 467 1 0 C 12 130 19 320 18 r 13 481 1 5 0 A 14 46 8 366 67 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PLT1.ampDAP:M0125:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SHN3.DAP/M0127/AthalianaCistrome XX ID SHN3.DAP:M0127:AthalianaCistrome XX NA SHN3.DAP XX DE SHN3.DAP XX OS Arabidopsis thaliana XX BF 12509; XX P0 A C G T 01 90 24 46 160 w 02 8 230 39 43 C 03 29 274 6 11 C 04 106 14 130 70 r 05 16 292 9 3 C 06 7 301 2 10 C 07 76 4 197 43 g 08 5 281 9 25 C 09 18 302 0 0 C 10 98 4 164 54 r 11 16 243 10 51 C 12 26 250 7 37 C 13 82 1 121 116 d 14 2 297 3 18 C 15 18 288 4 10 C 16 81 0 192 47 r 17 8 294 4 14 C 18 15 270 6 29 C 19 66 8 202 44 g 20 19 252 1 48 C 21 37 212 11 60 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SHN3.DAP:M0127:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF48.DAP/M0128/AthalianaCistrome XX ID ERF48.DAP:M0128:AthalianaCistrome XX NA ERF48.DAP XX DE ERF48.DAP XX OS Arabidopsis thaliana XX BF 8874; XX P0 A C G T 01 38 14 163 44 g 02 39 14 185 21 G 03 80 113 15 51 m 04 41 3 191 24 G 05 35 29 183 12 G 06 41 97 5 116 y 07 9 10 199 41 G 08 44 21 174 20 g 09 71 77 16 95 h 10 53 1 164 41 g 11 47 22 148 42 g 12 44 98 6 111 y 13 24 1 219 15 G 14 28 0 214 17 G 15 16 159 0 84 y 16 0 3 256 0 G 17 0 0 256 3 G 18 46 57 0 156 t 19 0 3 230 26 G 20 46 10 202 1 G 21 103 51 29 76 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF48.DAP:M0128:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF2.DAP/M0129/AthalianaCistrome XX ID DDF2.DAP:M0129:AthalianaCistrome XX NA DDF2.DAP XX DE DDF2.DAP XX OS Arabidopsis thaliana XX BF 12107; XX P0 A C G T 01 76 87 26 122 y 02 34 71 159 47 g 03 285 0 25 1 A 04 2 9 0 300 T 05 0 0 311 0 G 06 0 0 0 311 T 07 0 311 0 0 C 08 0 0 311 0 G 09 118 0 193 0 r 10 1 239 0 71 C 11 133 13 155 10 r 12 159 23 93 36 r 13 102 84 56 69 m 14 86 48 125 52 r 15 103 39 92 77 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF2.DAP:M0129:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF104.ampDAP/M0130/AthalianaCistrome XX ID ERF104.ampDAP:M0130:AthalianaCistrome XX NA ERF104.ampDAP XX DE ERF104.ampDAP XX OS Arabidopsis thaliana XX BF 4391; XX P0 A C G T 01 58 94 27 104 y 02 66 25 137 55 g 03 75 24 168 16 r 04 29 134 1 119 y 05 2 0 281 0 G 06 30 1 252 0 G 07 0 282 0 1 C 08 0 0 283 0 G 09 0 0 283 0 G 10 1 278 0 4 C 11 0 11 234 38 G 12 39 50 182 12 g 13 91 115 23 54 m 14 41 19 172 51 g 15 54 40 154 35 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF104.ampDAP:M0130:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF4.DAP/M0131/AthalianaCistrome XX ID CRF4.DAP:M0131:AthalianaCistrome XX NA CRF4.DAP XX DE CRF4.DAP XX OS Arabidopsis thaliana XX BF 10425; XX P0 A C G T 01 16 123 34 53 c 02 48 144 0 34 c 03 44 13 77 92 k 04 11 185 22 8 C 05 12 207 0 7 C 06 26 2 174 24 G 07 0 226 0 0 C 08 0 226 0 0 C 09 12 0 208 6 G 10 0 190 0 36 C 11 16 207 0 3 C 12 87 10 105 24 r 13 13 159 9 45 C 14 31 125 26 44 c 15 66 10 88 62 d 16 35 127 17 47 c 17 56 107 24 39 c 18 48 18 95 65 k 19 13 162 25 26 C 20 14 144 22 46 c 21 50 34 91 51 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF4.DAP:M0131:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g16750.ampDAP/M0132/AthalianaCistrome XX ID At4g16750.ampDAP:M0132:AthalianaCistrome XX NA At4g16750.ampDAP XX DE At4g16750.ampDAP XX OS Arabidopsis thaliana XX BF 2592; XX P0 A C G T 01 101 5 45 100 w 02 33 28 96 94 k 03 1 13 1 236 T 04 1 0 250 0 G 05 0 0 0 251 T 06 0 250 1 0 C 07 1 0 250 0 G 08 4 0 245 2 G 09 0 38 1 212 T 10 24 14 198 15 G 11 59 22 147 23 g 12 104 76 32 39 m 13 78 38 75 60 r 14 76 34 71 70 d 15 74 57 42 78 w 16 75 35 75 66 d 17 89 32 71 59 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g16750.ampDAP:M0132:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ESE1.ampDAP/M0133/AthalianaCistrome XX ID ESE1.ampDAP:M0133:AthalianaCistrome XX NA ESE1.ampDAP XX DE ESE1.ampDAP XX OS Arabidopsis thaliana XX BF 17742; XX P0 A C G T 01 68 28 111 53 r 02 96 15 131 18 r 03 48 122 4 86 y 04 0 0 260 0 G 05 21 0 239 0 G 06 0 254 0 6 C 07 0 0 255 5 G 08 0 0 260 0 G 09 7 246 0 7 C 10 4 2 239 15 G 11 27 50 182 1 G 12 61 123 20 56 c 13 40 11 167 42 g 14 62 23 146 29 g 15 52 118 19 71 y 16 52 15 160 33 g 17 50 25 154 31 g 18 63 109 38 50 c 19 40 19 161 40 g 20 66 29 137 28 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ESE1.ampDAP:M0133:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1.ampDAP/M0134/AthalianaCistrome XX ID DDF1.ampDAP:M0134:AthalianaCistrome XX NA DDF1.ampDAP XX DE DDF1.ampDAP XX OS Arabidopsis thaliana XX BF 8873; XX P0 A C G T 01 40 76 26 122 y 02 58 95 62 49 c 03 63 33 70 98 k 04 35 86 38 105 y 05 52 76 61 75 y 06 96 1 160 7 r 07 1 155 1 107 y 08 0 264 0 0 C 09 0 2 262 0 G 10 261 1 1 1 A 11 0 262 2 0 C 12 198 10 26 30 A 13 50 71 3 140 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1.ampDAP:M0134:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR5.ampDAP/M0135/AthalianaCistrome XX ID DEAR5.ampDAP:M0135:AthalianaCistrome XX NA DEAR5.ampDAP XX DE DEAR5.ampDAP XX OS Arabidopsis thaliana XX BF 12390; XX P0 A C G T 01 101 24 43 74 w 02 83 10 41 108 w 03 18 10 53 161 t 04 2 2 234 4 G 05 4 0 0 238 T 06 0 233 2 7 C 07 0 0 242 0 G 08 0 0 241 1 G 09 0 22 1 219 T 10 10 1 205 26 G 11 91 36 81 34 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR5.ampDAP:M0135:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF73.ampDAP/M0138/AthalianaCistrome XX ID ERF73.ampDAP:M0138:AthalianaCistrome XX NA ERF73.ampDAP XX DE ERF73.ampDAP XX OS Arabidopsis thaliana XX BF 17720; XX P0 A C G T 01 73 6 73 24 r 02 14 62 9 91 y 03 7 2 147 20 G 04 14 1 161 0 G 05 2 174 0 0 C 06 1 0 175 0 G 07 0 0 175 1 G 08 0 175 0 1 C 09 0 2 168 6 G 10 9 21 143 3 G 11 63 66 4 43 m 12 22 4 129 21 G 13 52 19 88 17 r 14 35 66 33 42 c 15 28 7 110 31 g 16 20 21 111 24 g 17 43 72 19 42 c 18 30 14 104 28 g 19 30 17 107 22 g 20 45 57 24 50 h 21 40 20 90 26 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF73.ampDAP:M0138:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G01250.ampDAP/M0139/AthalianaCistrome XX ID AT1G01250.ampDAP:M0139:AthalianaCistrome XX NA AT1G01250.ampDAP XX DE AT1G01250.ampDAP XX OS Arabidopsis thaliana XX BF 12256; XX P0 A C G T 01 4 17 2 106 T 02 2 0 127 0 G 03 5 0 3 121 T 04 0 128 1 0 C 05 0 0 129 0 G 06 0 0 129 0 G 07 0 24 0 105 T 08 10 1 112 6 G 09 38 11 58 22 r 10 50 43 7 29 m 11 28 13 58 30 g 12 42 10 42 35 d 13 32 30 25 42 t 14 29 14 64 22 g 15 48 11 40 30 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G01250.ampDAP:M0139:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MP.DAP/M0140/AthalianaCistrome XX ID MP.DAP:M0140:AthalianaCistrome XX NA MP.DAP XX DE MP.DAP XX OS Arabidopsis thaliana XX BF 3649; XX P0 A C G T 01 158 139 172 131 r 02 34 489 24 53 C 03 134 462 3 1 C 04 5 0 595 0 G 05 600 0 0 0 A 06 0 600 0 0 C 07 556 44 0 0 A 08 428 26 48 98 A 09 288 64 181 67 r 10 304 63 76 157 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MP.DAP:M0140:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF16.DAP/M0142/AthalianaCistrome XX ID ARF16.DAP:M0142:AthalianaCistrome XX NA ARF16.DAP XX DE ARF16.DAP XX OS Arabidopsis thaliana XX BF 12252; XX P0 A C G T 01 4 1 1 95 T 02 3 0 0 98 T 03 3 4 1 93 T 04 86 0 12 3 A 05 0 87 0 14 C 06 7 1 91 2 G 07 9 2 40 50 k 08 0 0 2 99 T 09 1 0 0 100 T 10 3 0 1 97 T 11 3 2 0 96 T 12 2 0 93 6 G 13 9 0 92 0 G 14 0 92 2 7 C 15 6 1 92 2 G 16 16 2 81 2 G 17 35 0 66 0 r 18 95 0 6 0 A 19 97 2 2 0 A 20 99 0 1 1 A 21 90 1 1 9 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF16.DAP:M0142:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G20910.DAP/M0143/AthalianaCistrome XX ID AT1G20910.DAP:M0143:AthalianaCistrome XX NA AT1G20910.DAP XX DE AT1G20910.DAP XX OS Arabidopsis thaliana XX BF 17707; XX P0 A C G T 01 208 109 100 179 w 02 460 43 31 62 A 03 452 7 4 133 A 04 242 10 0 344 w 05 0 31 0 565 T 06 0 238 0 358 y 07 511 0 85 0 A 08 596 0 0 0 A 09 0 0 0 596 T 10 0 17 0 579 T 11 102 9 143 342 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G20910.DAP:M0143:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G04880.ampDAP/M0144/AthalianaCistrome XX ID AT1G04880.ampDAP:M0144:AthalianaCistrome XX NA AT1G04880.ampDAP XX DE AT1G04880.ampDAP XX OS Arabidopsis thaliana XX BF 12257; XX P0 A C G T 01 371 45 71 77 a 02 327 38 64 135 a 03 549 1 0 14 A 04 37 375 67 85 c 05 33 237 0 294 y 06 434 0 0 130 A 07 0 0 0 564 T 08 555 0 9 0 A 09 8 34 67 455 T 10 339 32 95 98 a 11 265 31 52 216 w 12 3 9 2 550 T 13 564 0 0 0 A 14 108 1 9 446 T 15 415 44 70 35 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G04880.ampDAP:M0144:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g76110.ampDAP/M0145/AthalianaCistrome XX ID At1g76110.ampDAP:M0145:AthalianaCistrome XX NA At1g76110.ampDAP XX DE At1g76110.ampDAP XX OS Arabidopsis thaliana XX BF 12338; XX P0 A C G T 01 376 0 11 0 A 02 0 0 4 383 T 03 36 43 48 260 t 04 224 17 29 117 w 05 252 30 52 53 a 06 132 30 47 178 w 07 132 92 71 92 a 08 333 10 23 21 A 09 4 0 9 374 T 10 0 23 28 336 T 11 172 0 22 193 w 12 351 0 36 0 A 13 387 0 0 0 A 14 0 0 0 387 T 15 95 42 58 192 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g76110.ampDAP:M0145:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g76110.DAP/M0146/AthalianaCistrome XX ID At1g76110.DAP:M0146:AthalianaCistrome XX NA At1g76110.DAP XX DE At1g76110.DAP XX OS Arabidopsis thaliana XX BF 12338; XX P0 A C G T 01 249 51 36 171 w 02 146 43 69 249 w 03 218 76 54 159 w 04 507 0 0 0 A 05 156 0 0 351 W 06 0 0 0 507 T 07 0 0 0 507 T 08 507 0 0 0 A 09 507 0 0 0 A 10 0 0 0 507 T 11 107 65 99 236 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g76110.DAP:M0146:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G17410.DAP/M0147/AthalianaCistrome XX ID AT2G17410.DAP:M0147:AthalianaCistrome XX NA AT2G17410.DAP XX DE AT2G17410.DAP XX OS Arabidopsis thaliana XX BF 12277; XX P0 A C G T 01 319 29 49 57 A 02 324 41 19 70 A 03 256 29 6 163 w 04 122 26 20 286 w 05 100 89 30 235 t 06 173 72 125 84 r 07 362 32 0 60 A 08 443 3 8 0 A 09 445 0 0 9 A 10 0 0 0 454 T 11 0 119 0 335 Y 12 352 0 102 0 A 13 424 5 25 0 A 14 243 0 10 201 w 15 122 14 8 310 W XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G17410.DAP:M0147:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G04880.DAP/M0148/AthalianaCistrome XX ID AT1G04880.DAP:M0148:AthalianaCistrome XX NA AT1G04880.DAP XX DE AT1G04880.DAP XX OS Arabidopsis thaliana XX BF 12257; XX P0 A C G T 01 22 26 11 256 T 02 219 4 0 92 W 03 15 0 0 300 T 04 309 2 2 2 A 05 108 26 25 156 w 06 65 19 13 218 T 07 286 18 7 4 A 08 0 1 0 314 T 09 315 0 0 0 A 10 86 0 0 229 W 11 202 0 72 41 a 12 41 19 248 7 G 13 3 2 0 310 T 14 71 20 6 218 T 15 32 20 17 246 T 16 80 22 33 180 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G04880.DAP:M0148:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BPC1.ampDAP/M0149/AthalianaCistrome XX ID BPC1.ampDAP:M0149:AthalianaCistrome XX NA BPC1.ampDAP XX DE BPC1.ampDAP XX OS Arabidopsis thaliana XX BF 12377; XX P0 A C G T 01 77 398 14 109 c 02 52 53 24 469 T 03 30 468 25 75 C 04 20 44 0 534 T 05 16 380 12 190 y 06 0 12 0 586 T 07 9 572 1 16 C 08 3 3 0 592 T 09 10 576 3 9 C 10 0 0 0 598 T 11 2 523 5 68 C 12 5 6 0 587 T 13 2 550 10 36 C 14 1 46 1 550 T 15 94 337 7 160 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BPC1.ampDAP:M0149:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BPC5.ampDAP/M0153/AthalianaCistrome XX ID BPC5.ampDAP:M0153:AthalianaCistrome XX NA BPC5.ampDAP XX DE BPC5.ampDAP XX OS Arabidopsis thaliana XX BF 12378; XX P0 A C G T 01 19 5 22 4 r 02 33 3 14 0 r 03 14 5 27 4 r 04 30 6 12 2 a 05 14 7 25 4 r 06 28 7 8 7 a 07 17 0 26 7 r 08 33 3 12 2 a 09 9 2 39 0 G 10 40 0 0 10 A 11 2 2 41 5 G 12 36 5 7 2 A 13 13 0 36 1 R 14 37 2 9 2 A 15 3 1 42 4 G 16 41 0 3 6 A 17 6 0 44 0 G 18 47 0 3 0 A 19 9 0 40 1 G 20 46 0 4 0 A 21 7 1 42 0 G 22 49 0 0 1 A 23 4 0 45 1 G 24 43 1 6 0 A 25 8 0 40 2 G 26 48 0 2 0 A 27 3 0 47 0 G 28 50 0 0 0 A 29 4 3 42 1 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BPC5.ampDAP:M0153:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BAM8.DAP/M0154/AthalianaCistrome XX ID BAM8.DAP:M0154:AthalianaCistrome XX NA BAM8.DAP XX DE BAM8.DAP XX OS Arabidopsis thaliana XX BF 12373; XX P0 A C G T 01 34 206 5 355 y 02 19 499 42 40 C 03 417 37 139 7 A 04 0 599 0 1 C 05 599 0 1 0 A 06 2 598 0 0 C 07 0 0 600 0 G 08 0 10 0 590 T 09 13 0 585 2 G 10 29 244 12 315 y 11 84 241 248 27 s 12 295 73 93 139 a 13 269 99 123 109 a 14 167 195 100 138 m 15 97 130 111 262 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BAM8.DAP:M0154:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BAM8.ampDAP/M0155/AthalianaCistrome XX ID BAM8.ampDAP:M0155:AthalianaCistrome XX NA BAM8.ampDAP XX DE BAM8.ampDAP XX OS Arabidopsis thaliana XX BF 12373; XX P0 A C G T 01 208 146 131 105 a 02 151 132 166 141 r 03 67 129 114 280 t 04 126 87 72 305 t 05 44 268 174 104 s 06 296 0 289 5 r 07 0 564 0 26 C 08 590 0 0 0 A 09 0 590 0 0 C 10 0 0 590 0 G 11 0 2 0 588 T 12 0 0 590 0 G 13 37 81 44 428 T 14 19 161 397 13 s 15 317 7 188 78 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BAM8.ampDAP:M0155:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM2.ampDAP/M0156/AthalianaCistrome XX ID BIM2.ampDAP:M0156:AthalianaCistrome XX NA BIM2.ampDAP XX DE BIM2.ampDAP XX OS Arabidopsis thaliana XX BF 10514; XX P0 A C G T 01 164 93 189 139 r 02 123 183 167 112 s 03 168 197 94 126 m 04 216 111 148 110 r 05 80 248 162 95 s 06 133 75 286 91 g 07 81 139 124 241 t 08 124 92 284 85 g 09 167 146 113 159 w 10 190 87 177 131 r 11 150 110 127 198 w 12 136 96 291 62 g 13 115 70 218 182 k 14 0 584 0 1 C 15 581 0 4 0 A 16 0 583 0 2 C 17 23 0 562 0 G 18 0 7 6 572 T 19 1 0 584 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM2.ampDAP:M0156:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM2.DAP/M0157/AthalianaCistrome XX ID BIM2.DAP:M0157:AthalianaCistrome XX NA BIM2.DAP XX DE BIM2.DAP XX OS Arabidopsis thaliana XX BF 10514; XX P0 A C G T 01 0 600 0 0 C 02 599 0 1 0 A 03 0 596 0 4 C 04 3 0 597 0 G 05 1 0 0 599 T 06 0 0 600 0 G 07 300 199 37 64 m 08 55 288 131 126 c 09 197 117 86 200 w 10 134 166 87 213 y 11 139 113 172 176 k 12 66 395 53 86 c 13 332 86 126 56 a 14 59 373 43 125 c 15 135 110 308 47 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM2.DAP:M0157:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH122.DAP/M0158/AthalianaCistrome XX ID bHLH122.DAP:M0158:AthalianaCistrome XX NA bHLH122.DAP XX DE bHLH122.DAP XX OS Arabidopsis thaliana XX BF 12563; XX P0 A C G T 01 147 82 120 248 t 02 121 137 145 194 t 03 218 45 161 173 d 04 99 125 212 161 k 05 7 590 0 0 C 06 329 260 0 8 m 07 597 0 0 0 A 08 0 594 3 0 C 09 0 0 1 596 T 10 1 0 0 596 T 11 1 0 596 0 G 12 76 302 82 137 c 13 211 168 79 139 m 14 170 148 68 211 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH122.DAP:M0158:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH28.DAP/M0159/AthalianaCistrome XX ID bHLH28.DAP:M0159:AthalianaCistrome XX NA bHLH28.DAP XX DE bHLH28.DAP XX OS Arabidopsis thaliana XX BF 12567; XX P0 A C G T 01 255 93 104 137 a 02 238 82 99 170 w 03 107 142 95 245 t 04 42 130 72 345 t 05 0 0 589 0 G 06 0 0 0 589 T 07 589 0 0 0 A 08 0 589 0 0 C 09 1 0 588 0 G 10 26 0 559 4 G 11 409 96 3 81 A 12 133 246 61 149 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH28.DAP:M0159:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH10.ampDAP/M0160/AthalianaCistrome XX ID bHLH10.ampDAP:M0160:AthalianaCistrome XX NA bHLH10.ampDAP XX DE bHLH10.ampDAP XX OS Arabidopsis thaliana XX BF 12562; XX P0 A C G T 01 235 58 106 196 w 02 111 92 183 209 k 03 3 66 4 522 T 04 0 0 595 0 G 05 5 0 0 590 T 06 0 595 0 0 C 07 0 0 595 0 G 08 0 0 595 0 G 09 0 112 0 483 T 10 76 26 457 36 G 11 200 85 247 63 r 12 208 163 63 161 h 13 163 92 200 140 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH10.ampDAP:M0160:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH80.ampDAP/M0163/AthalianaCistrome XX ID bHLH80.ampDAP:M0163:AthalianaCistrome XX NA bHLH80.ampDAP XX DE bHLH80.ampDAP XX OS Arabidopsis thaliana XX BF 12572; XX P0 A C G T 01 167 40 121 247 w 02 54 65 300 156 k 03 1 573 1 0 C 04 347 228 0 0 m 05 575 0 0 0 A 06 0 565 10 0 C 07 0 0 0 575 T 08 0 0 0 575 T 09 0 0 575 0 G 10 7 507 6 55 C 11 382 66 38 89 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH80.ampDAP:M0163:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH10.DAP/M0164/AthalianaCistrome XX ID bHLH10.DAP:M0164:AthalianaCistrome XX NA bHLH10.DAP XX DE bHLH10.DAP XX OS Arabidopsis thaliana XX BF 12562; XX P0 A C G T 01 186 65 209 136 r 02 174 124 152 146 r 03 196 148 63 189 w 04 192 58 137 209 w 05 102 92 203 199 k 06 20 86 0 490 T 07 0 0 596 0 G 08 20 0 22 554 T 09 0 596 0 0 C 10 1 0 595 0 G 11 0 0 596 0 G 12 0 142 0 454 T 13 80 30 455 31 G 14 158 72 308 58 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH10.DAP:M0164:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM1.ampDAP/M0165/AthalianaCistrome XX ID BIM1.ampDAP:M0165:AthalianaCistrome XX NA BIM1.ampDAP XX DE BIM1.ampDAP XX OS Arabidopsis thaliana XX BF 17770; XX P0 A C G T 01 157 130 72 203 w 02 192 140 204 26 r 03 54 45 101 362 t 04 0 562 0 0 C 05 562 0 0 0 A 06 0 562 0 0 C 07 0 0 562 0 G 08 0 0 0 562 T 09 0 0 562 0 G 10 384 128 9 41 A 11 35 318 69 140 c 12 155 162 55 190 h 13 143 157 68 194 h 14 130 148 82 202 y 15 76 278 58 150 y 16 254 124 76 108 a 17 99 267 47 149 y 18 128 134 207 93 g 19 112 120 51 279 t 20 107 119 197 139 g 21 130 162 115 155 y 22 127 158 98 179 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM1.ampDAP:M0165:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH34.DAP/M0166/AthalianaCistrome XX ID bHLH34.DAP:M0166:AthalianaCistrome XX NA bHLH34.DAP XX DE bHLH34.DAP XX OS Arabidopsis thaliana XX BF 10516; XX P0 A C G T 01 118 68 329 52 g 02 123 69 62 313 t 03 108 37 365 57 g 04 154 124 162 127 r 05 180 119 101 167 w 06 152 124 122 169 w 07 140 72 242 113 g 08 205 135 153 74 r 09 7 560 0 0 C 10 549 6 9 3 A 11 0 567 0 0 C 12 45 0 522 0 G 13 13 68 2 484 T 14 0 0 559 8 G 15 65 188 117 197 y 16 89 308 85 85 c 17 224 87 132 124 a 18 182 99 152 134 r 19 139 213 105 110 c 20 203 101 106 157 w 21 86 202 106 173 y 22 136 105 211 115 g 23 162 104 97 204 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH34.DAP:M0166:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH122.ampDAP/M0167/AthalianaCistrome XX ID bHLH122.ampDAP:M0167:AthalianaCistrome XX NA bHLH122.ampDAP XX DE bHLH122.ampDAP XX OS Arabidopsis thaliana XX BF 12563; XX P0 A C G T 01 157 44 167 195 d 02 77 118 230 138 g 03 0 562 1 0 C 04 314 248 0 1 m 05 563 0 0 0 A 06 0 560 0 3 C 07 0 0 0 563 T 08 0 0 0 563 T 09 0 0 563 0 G 10 41 367 39 116 c 11 270 135 71 87 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH122.ampDAP:M0167:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH34.ampDAP/M0168/AthalianaCistrome XX ID bHLH34.ampDAP:M0168:AthalianaCistrome XX NA bHLH34.ampDAP XX DE bHLH34.ampDAP XX OS Arabidopsis thaliana XX BF 10516; XX P0 A C G T 01 149 100 85 239 w 02 63 43 422 45 G 03 216 62 217 78 r 04 0 573 0 0 C 05 507 4 56 6 A 06 0 527 0 46 C 07 0 0 573 0 G 08 1 1 2 569 T 09 1 0 572 0 G 10 53 158 137 225 y 11 148 196 78 151 h 12 167 135 113 158 w 13 142 91 158 182 k 14 156 155 122 140 m 15 89 334 49 101 c 16 264 87 83 139 a 17 78 281 111 103 c 18 184 70 227 92 r 19 80 152 132 209 y 20 96 82 231 164 k 21 113 204 105 151 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH34.ampDAP:M0168:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM1.DAP/M0169/AthalianaCistrome XX ID BIM1.DAP:M0169:AthalianaCistrome XX NA BIM1.DAP XX DE BIM1.DAP XX OS Arabidopsis thaliana XX BF 17770; XX P0 A C G T 01 0 566 0 0 C 02 566 0 0 0 A 03 0 566 0 0 C 04 3 0 563 0 G 05 0 0 0 566 T 06 0 0 566 0 G 07 408 121 9 28 A 08 3 371 67 125 c 09 181 130 77 178 w 10 131 164 58 213 y 11 119 173 110 164 y 12 89 265 71 141 c 13 240 151 88 87 m 14 120 249 62 135 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM1.DAP:M0169:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH157.DAP/M0170/AthalianaCistrome XX ID bHLH157.DAP:M0170:AthalianaCistrome XX NA bHLH157.DAP XX DE bHLH157.DAP XX OS Arabidopsis thaliana XX BF 12565; XX P0 A C G T 01 102 77 38 79 h 02 82 140 42 32 m 03 160 27 42 67 a 04 163 20 58 55 a 05 110 51 54 81 w 06 65 43 17 171 t 07 69 81 34 112 y 08 74 76 77 69 v 09 92 41 75 88 d 10 130 39 38 89 w 11 23 182 4 87 y 12 296 0 0 0 A 13 0 296 0 0 C 14 0 0 286 10 G 15 11 15 24 246 T 16 52 188 6 50 c 17 99 7 0 190 w 18 18 186 26 66 c 19 33 82 20 161 y 20 53 56 66 121 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH157.DAP:M0170:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BIM3.DAP/M0174/AthalianaCistrome XX ID BIM3.DAP:M0174:AthalianaCistrome XX NA BIM3.DAP XX DE BIM3.DAP XX OS Arabidopsis thaliana XX BF 10522; XX P0 A C G T 01 77 16 26 18 a 02 12 89 11 25 c 03 15 16 92 14 g 04 18 16 7 96 T 05 7 28 85 17 g 06 51 47 17 22 m 07 44 22 32 39 w 08 37 28 24 48 w 09 28 48 59 2 s 10 9 16 32 80 t 11 0 137 0 0 C 12 137 0 0 0 A 13 0 137 0 0 C 14 0 0 137 0 G 15 0 0 0 137 T 16 0 0 137 0 G 17 77 36 11 13 m 18 4 80 20 33 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BIM3.DAP:M0174:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH104.DAP/M0175/AthalianaCistrome XX ID bHLH104.DAP:M0175:AthalianaCistrome XX NA bHLH104.DAP XX DE bHLH104.DAP XX OS Arabidopsis thaliana XX BF 12062; XX P0 A C G T 01 10 0 37 3 G 02 18 13 14 5 v 03 0 50 0 0 C 04 47 0 3 0 A 05 1 49 0 0 C 06 0 0 50 0 G 07 5 1 0 44 T 08 0 1 49 0 G 09 4 14 16 16 b 10 10 29 5 6 c 11 19 6 11 14 w 12 15 3 20 12 r 13 1 26 11 12 c 14 14 22 5 9 m 15 14 15 8 13 h 16 5 25 18 2 s 17 8 6 20 16 k 18 9 8 25 8 g 19 5 15 22 8 s 20 15 25 2 8 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH104.DAP:M0175:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH64.DAP/M0178/AthalianaCistrome XX ID bHLH64.DAP:M0178:AthalianaCistrome XX NA bHLH64.DAP XX DE bHLH64.DAP XX OS Arabidopsis thaliana XX BF 17733; XX P0 A C G T 01 64 0 0 0 A 02 0 64 0 0 C 03 0 64 0 0 C 04 64 0 0 0 A 05 0 0 64 0 G 06 0 0 0 64 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH64.DAP:M0178:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bHLH74.ampDAP/M0179/AthalianaCistrome XX ID bHLH74.ampDAP:M0179:AthalianaCistrome XX NA bHLH74.ampDAP XX DE bHLH74.ampDAP XX OS Arabidopsis thaliana XX BF 12570; XX P0 A C G T 01 0 87 0 0 C 02 87 0 0 0 A 03 0 87 0 0 C 04 7 0 80 0 G 05 0 0 0 87 T 06 0 0 87 0 G 07 65 20 2 0 A 08 0 54 3 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bHLH74.ampDAP:M0179:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G10720.DAP/M0181/AthalianaCistrome XX ID AT1G10720.DAP:M0181:AthalianaCistrome XX NA AT1G10720.DAP XX DE AT1G10720.DAP XX OS Arabidopsis thaliana XX BF 12258; XX P0 A C G T 01 119 12 45 3 r 02 0 0 179 0 G 03 179 0 0 0 A 04 167 0 0 12 A 05 5 33 124 17 G 06 52 59 34 34 m 07 15 9 1 154 T 08 1 0 0 178 T 09 0 178 1 0 C 10 0 6 1 172 T 11 167 1 11 0 A 12 0 0 179 0 G 13 177 1 1 0 A 14 137 3 21 18 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G10720.DAP:M0181:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP50.ampDAP/M0182/AthalianaCistrome XX ID bZIP50.ampDAP:M0182:AthalianaCistrome XX NA bZIP50.ampDAP XX DE bZIP50.ampDAP XX OS Arabidopsis thaliana XX BF 10637; XX P0 A C G T 01 89 202 187 106 s 02 49 263 8 264 y 03 107 167 232 78 s 04 425 89 1 69 A 05 1 580 3 0 C 06 97 14 467 6 G 07 0 70 0 514 T 08 21 563 0 0 C 09 566 5 0 13 A 10 8 189 126 261 y 11 23 485 43 33 C 12 324 55 112 93 a 13 103 184 77 220 y 14 63 365 59 97 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP50.ampDAP:M0182:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA6.ampDAP/M0183/AthalianaCistrome XX ID TGA6.ampDAP:M0183:AthalianaCistrome XX NA TGA6.ampDAP XX DE TGA6.ampDAP XX OS Arabidopsis thaliana XX BF 17746; XX P0 A C G T 01 195 78 194 116 r 02 289 59 217 18 r 03 0 0 0 583 T 04 2 0 574 7 G 05 578 0 2 3 A 06 0 568 1 14 C 07 35 0 548 0 G 08 4 0 0 579 T 09 74 504 5 0 C 10 569 0 5 9 A 11 0 72 209 302 k 12 57 406 56 64 C 13 308 46 104 125 a 14 152 73 84 274 w 15 123 193 77 190 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA6.ampDAP:M0183:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA9.ampDAP/M0184/AthalianaCistrome XX ID TGA9.ampDAP:M0184:AthalianaCistrome XX NA TGA9.ampDAP XX DE TGA9.ampDAP XX OS Arabidopsis thaliana XX BF 12526; XX P0 A C G T 01 126 84 56 333 t 02 85 70 407 37 g 03 395 122 82 0 a 04 0 0 0 599 T 05 4 0 554 41 G 06 599 0 0 0 A 07 0 456 3 140 C 08 77 0 522 0 G 09 44 3 0 552 T 10 117 370 66 46 c 11 426 0 108 65 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA9.ampDAP:M0184:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA2.ampDAP/M0185/AthalianaCistrome XX ID TGA2.ampDAP:M0185:AthalianaCistrome XX NA TGA2.ampDAP XX DE TGA2.ampDAP XX OS Arabidopsis thaliana XX BF 3636; XX P0 A C G T 01 18 233 5 327 y 02 114 94 298 77 g 03 390 158 3 32 m 04 0 582 0 1 C 05 127 5 438 13 G 06 1 146 1 435 Y 07 12 571 0 0 C 08 565 0 0 18 A 09 0 233 132 218 y 10 13 507 36 27 C 11 314 43 127 99 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA2.ampDAP:M0185:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA6.DAP/M0186/AthalianaCistrome XX ID TGA6.DAP:M0186:AthalianaCistrome XX NA TGA6.DAP XX DE TGA6.DAP XX OS Arabidopsis thaliana XX BF 17746; XX P0 A C G T 01 186 70 179 145 d 02 254 78 238 10 r 03 0 0 0 580 T 04 1 0 576 3 G 05 578 0 2 0 A 06 0 561 0 19 C 07 20 1 559 0 G 08 0 0 0 580 T 09 71 499 6 4 C 10 562 0 6 12 A 11 2 73 202 303 k 12 28 434 62 56 C 13 293 43 118 126 a 14 146 95 87 252 w 15 134 182 76 188 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA6.DAP:M0186:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP52.ampDAP/M0187/AthalianaCistrome XX ID bZIP52.ampDAP:M0187:AthalianaCistrome XX NA bZIP52.ampDAP XX DE bZIP52.ampDAP XX OS Arabidopsis thaliana XX BF 12580; XX P0 A C G T 01 150 73 113 264 w 02 127 63 207 203 k 03 222 178 110 90 m 04 137 332 0 131 c 05 222 224 81 73 m 06 400 3 197 0 r 07 20 71 504 5 G 08 0 580 0 20 C 09 0 0 0 600 T 10 0 0 599 1 G 11 0 0 235 365 k 12 79 496 3 22 C 13 444 57 31 68 A 14 205 127 61 207 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP52.ampDAP:M0187:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP53.ampDAP/M0188/AthalianaCistrome XX ID bZIP53.ampDAP:M0188:AthalianaCistrome XX NA bZIP53.ampDAP XX DE bZIP53.ampDAP XX OS Arabidopsis thaliana XX BF 12581; XX P0 A C G T 01 160 60 154 164 d 02 205 70 96 167 w 03 148 42 57 291 w 04 33 6 430 69 G 05 174 319 43 2 m 06 3 15 0 520 T 07 0 0 481 57 G 08 538 0 0 0 A 09 0 534 0 4 C 10 1 0 537 0 G 11 0 0 0 538 T 12 0 0 538 0 G 13 0 0 394 144 K 14 116 404 3 15 C 15 319 77 75 67 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP53.ampDAP:M0188:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HY5.ampDAP/M0189/AthalianaCistrome XX ID HY5.ampDAP:M0189:AthalianaCistrome XX NA HY5.ampDAP XX DE HY5.ampDAP XX OS Arabidopsis thaliana XX BF 3540; XX P0 A C G T 01 192 55 177 143 d 02 187 90 130 160 w 03 82 94 65 326 t 04 42 12 500 13 G 05 327 94 122 24 a 06 3 29 2 533 T 07 0 0 547 20 G 08 566 0 1 0 A 09 0 561 0 6 C 10 0 3 564 0 G 11 0 0 0 567 T 12 19 153 392 3 S 13 132 0 313 122 g 14 104 367 14 82 c 15 188 195 84 100 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HY5.ampDAP:M0189:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP18.ampDAP/M0190/AthalianaCistrome XX ID bZIP18.ampDAP:M0190:AthalianaCistrome XX NA bZIP18.ampDAP XX DE bZIP18.ampDAP XX OS Arabidopsis thaliana XX BF 10639; XX P0 A C G T 01 216 49 130 205 w 02 82 36 48 434 T 03 16 0 478 106 G 04 359 241 0 0 m 05 0 600 0 0 C 06 600 0 0 0 A 07 48 0 552 0 G 08 2 538 48 12 C 09 0 141 8 451 T 10 86 59 293 162 k 11 104 1 295 200 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP18.ampDAP:M0190:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF3.ampDAP/M0192/AthalianaCistrome XX ID GBF3.ampDAP:M0192:AthalianaCistrome XX NA GBF3.ampDAP XX DE GBF3.ampDAP XX OS Arabidopsis thaliana XX BF 17724; XX P0 A C G T 01 171 49 154 162 d 02 158 122 122 134 w 03 179 81 59 217 w 04 79 64 254 139 k 05 134 142 152 108 v 06 169 134 7 226 h 07 6 268 212 50 s 08 535 0 1 0 A 09 0 501 16 19 C 10 14 10 505 7 G 11 0 0 1 535 T 12 0 0 536 0 G 13 0 4 390 142 K 14 127 386 2 21 C 15 267 53 120 96 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF3.ampDAP:M0192:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA1.ampDAP/M0195/AthalianaCistrome XX ID TGA1.ampDAP:M0195:AthalianaCistrome XX NA TGA1.ampDAP XX DE TGA1.ampDAP XX OS Arabidopsis thaliana XX BF 9921; XX P0 A C G T 01 241 90 74 194 w 02 195 89 133 182 w 03 168 63 196 172 d 04 244 108 221 26 r 05 23 18 0 558 T 06 2 28 517 52 G 07 597 0 0 2 A 08 0 584 0 15 C 09 61 2 536 0 G 10 0 2 0 597 T 11 48 551 0 0 C 12 599 0 0 0 A 13 0 51 208 340 k 14 28 460 45 66 C 15 361 59 81 98 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA1.ampDAP:M0195:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP16.ampDAP/M0197/AthalianaCistrome XX ID bZIP16.ampDAP:M0197:AthalianaCistrome XX NA bZIP16.ampDAP XX DE bZIP16.ampDAP XX OS Arabidopsis thaliana XX BF 12573; XX P0 A C G T 01 217 58 159 163 d 02 228 65 110 194 w 03 181 50 76 290 w 04 52 12 363 170 k 05 132 230 175 60 s 06 96 141 0 360 t 07 0 208 340 49 s 08 597 0 0 0 A 09 0 592 0 5 C 10 5 0 592 0 G 11 0 0 0 597 T 12 0 0 597 0 G 13 0 0 508 89 G 14 58 539 0 0 C 15 439 41 90 27 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP16.ampDAP:M0197:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA4.ampDAP/M0199/AthalianaCistrome XX ID TGA4.ampDAP:M0199:AthalianaCistrome XX NA TGA4.ampDAP XX DE TGA4.ampDAP XX OS Arabidopsis thaliana XX BF 10646; XX P0 A C G T 01 210 67 185 137 r 02 261 94 78 166 w 03 131 101 55 312 t 04 59 37 488 15 G 05 305 223 71 0 m 06 0 2 0 597 T 07 0 0 547 52 G 08 595 0 0 4 A 09 0 565 1 33 C 10 19 0 580 0 G 11 0 0 0 599 T 12 26 553 19 1 C 13 575 0 17 7 A 14 10 232 95 262 y 15 151 214 68 166 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA4.ampDAP:M0199:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI5.DAP/M0201/AthalianaCistrome XX ID ABI5.DAP:M0201:AthalianaCistrome XX NA ABI5.DAP XX DE ABI5.DAP XX OS Arabidopsis thaliana XX BF 3091; XX P0 A C G T 01 241 71 131 152 w 02 217 59 167 152 d 03 224 80 158 133 r 04 161 39 98 297 w 05 44 19 400 132 g 06 157 119 296 23 r 07 198 92 0 305 w 08 0 289 294 12 s 09 595 0 0 0 A 10 0 595 0 0 C 11 0 0 595 0 G 12 0 0 0 595 T 13 0 0 595 0 G 14 0 0 446 149 K 15 27 568 0 0 C 16 394 50 123 28 a 17 151 124 174 146 r 18 190 117 87 201 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI5.DAP:M0201:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA10.ampDAP/M0202/AthalianaCistrome XX ID TGA10.ampDAP:M0202:AthalianaCistrome XX NA TGA10.ampDAP XX DE TGA10.ampDAP XX OS Arabidopsis thaliana XX BF 12524; XX P0 A C G T 01 196 67 176 161 d 02 295 61 235 9 r 03 2 1 0 597 T 04 0 3 589 8 G 05 600 0 0 0 A 06 0 589 0 11 C 07 20 1 579 0 G 08 0 0 0 600 T 09 57 543 0 0 C 10 596 0 2 2 A 11 0 82 202 316 k 12 31 429 60 80 C 13 308 57 105 130 a 14 168 79 94 259 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA10.ampDAP:M0202:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI5.ampDAP/M0204/AthalianaCistrome XX ID ABI5.ampDAP:M0204:AthalianaCistrome XX NA ABI5.ampDAP XX DE ABI5.ampDAP XX OS Arabidopsis thaliana XX BF 3091; XX P0 A C G T 01 219 55 173 136 r 02 211 79 152 141 r 03 151 51 76 305 w 04 39 21 404 119 G 05 153 124 286 20 r 06 180 98 0 305 w 07 0 278 295 10 s 08 583 0 0 0 A 09 0 583 0 0 C 10 0 0 583 0 G 11 1 0 0 582 T 12 0 0 583 0 G 13 0 0 447 136 G 14 26 557 0 0 C 15 388 45 119 31 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI5.ampDAP:M0204:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP48.ampDAP/M0206/AthalianaCistrome XX ID bZIP48.ampDAP:M0206:AthalianaCistrome XX NA bZIP48.ampDAP XX DE bZIP48.ampDAP XX OS Arabidopsis thaliana XX BF 12579; XX P0 A C G T 01 75 86 76 316 t 02 8 6 391 148 K 03 125 428 0 0 C 04 0 553 0 0 C 05 552 0 0 1 A 06 1 548 3 1 C 07 8 1 544 0 G 08 0 0 0 553 T 09 37 516 0 0 C 10 536 0 14 3 A 11 3 28 384 138 G 12 64 465 4 20 C 13 332 49 36 136 a 14 172 93 81 207 w 15 145 166 65 177 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP48.ampDAP:M0206:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF5.ampDAP/M0207/AthalianaCistrome XX ID GBF5.ampDAP:M0207:AthalianaCistrome XX NA GBF5.ampDAP XX DE GBF5.ampDAP XX OS Arabidopsis thaliana XX BF 12412; XX P0 A C G T 01 186 62 173 163 d 02 229 65 105 185 w 03 155 33 59 337 w 04 15 1 461 107 G 05 128 353 89 14 c 06 44 45 0 495 T 07 0 74 469 41 G 08 584 0 0 0 A 09 0 579 0 5 C 10 1 2 581 0 G 11 0 0 0 584 T 12 0 0 584 0 G 13 0 0 457 127 G 14 118 460 1 5 C 15 373 65 78 68 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF5.ampDAP:M0207:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP18.DAP/M0208/AthalianaCistrome XX ID bZIP18.DAP:M0208:AthalianaCistrome XX NA bZIP18.DAP XX DE bZIP18.DAP XX OS Arabidopsis thaliana XX BF 10639; XX P0 A C G T 01 196 128 142 131 a 02 200 298 0 99 m 03 147 328 66 56 c 04 465 1 131 0 A 05 32 57 508 0 G 06 0 588 0 9 C 07 0 0 0 597 T 08 0 0 597 0 G 09 0 3 281 313 k 10 63 534 0 0 C 11 444 38 61 54 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP18.DAP:M0208:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA1.DAP/M0209/AthalianaCistrome XX ID TGA1.DAP:M0209:AthalianaCistrome XX NA TGA1.DAP XX DE TGA1.DAP XX OS Arabidopsis thaliana XX BF 9921; XX P0 A C G T 01 211 65 165 154 d 02 271 84 71 169 w 03 130 82 56 327 t 04 53 47 461 34 G 05 304 215 65 11 m 06 9 5 0 581 T 07 0 0 509 86 G 08 593 0 2 0 A 09 0 561 0 34 C 10 22 1 572 0 G 11 0 0 0 595 T 12 7 580 8 0 C 13 589 0 6 0 A 14 9 228 77 281 y 15 147 211 66 171 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA1.DAP:M0209:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA5.DAP/M0214/AthalianaCistrome XX ID TGA5.DAP:M0214:AthalianaCistrome XX NA TGA5.DAP XX DE TGA5.DAP XX OS Arabidopsis thaliana XX BF 10645; XX P0 A C G T 01 186 65 184 153 d 02 269 69 240 10 r 03 0 0 0 588 T 04 0 0 583 5 G 05 588 0 0 0 A 06 0 574 0 14 C 07 18 0 570 0 G 08 0 0 0 588 T 09 60 525 2 1 C 10 584 0 0 4 A 11 0 79 191 318 k 12 23 449 63 53 C 13 292 53 119 124 a 14 149 77 92 270 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA5.DAP:M0214:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF5.DAP/M0215/AthalianaCistrome XX ID GBF5.DAP:M0215:AthalianaCistrome XX NA GBF5.DAP XX DE GBF5.DAP XX OS Arabidopsis thaliana XX BF 12412; XX P0 A C G T 01 178 68 176 154 d 02 233 69 97 177 w 03 149 41 59 327 w 04 6 4 471 95 G 05 129 351 81 15 c 06 29 55 0 492 T 07 0 69 463 44 G 08 576 0 0 0 A 09 0 571 2 3 C 10 2 4 570 0 G 11 2 0 0 574 T 12 0 0 576 0 G 13 0 0 451 125 G 14 136 434 2 4 C 15 353 80 78 65 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF5.DAP:M0215:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA2.DAP/M0216/AthalianaCistrome XX ID TGA2.DAP:M0216:AthalianaCistrome XX NA TGA2.DAP XX DE TGA2.DAP XX OS Arabidopsis thaliana XX BF 3636; XX P0 A C G T 01 204 69 184 142 r 02 286 68 237 8 r 03 0 0 0 599 T 04 0 2 591 6 G 05 599 0 0 0 A 06 0 583 0 16 C 07 17 1 581 0 G 08 1 0 0 598 T 09 71 528 0 0 C 10 593 0 2 4 A 11 2 90 199 308 k 12 51 421 54 73 C 13 286 53 112 148 a 14 151 83 86 279 w 15 144 183 68 204 y 16 162 132 145 160 w 17 155 142 100 202 w 18 119 181 99 200 y 19 149 101 191 158 k 20 155 112 96 236 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA2.DAP:M0216:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF2.DAP/M0217/AthalianaCistrome XX ID ABF2.DAP:M0217:AthalianaCistrome XX NA ABF2.DAP XX DE ABF2.DAP XX OS Arabidopsis thaliana XX BF 17721; XX P0 A C G T 01 207 79 157 152 d 02 278 80 96 141 a 03 265 43 78 209 w 04 237 85 80 193 w 05 184 138 110 163 w 06 25 84 54 432 T 07 1 0 567 27 G 08 174 421 0 0 M 09 0 595 0 0 C 10 594 0 0 1 A 11 0 595 0 0 C 12 0 0 595 0 G 13 0 0 0 595 T 14 20 252 323 0 s 15 262 0 92 241 w 16 43 305 104 143 c 17 130 380 29 56 c 18 281 94 40 180 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF2.DAP:M0217:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AREB3.ampDAP/M0218/AthalianaCistrome XX ID AREB3.ampDAP:M0218:AthalianaCistrome XX NA AREB3.ampDAP XX DE AREB3.ampDAP XX OS Arabidopsis thaliana XX BF 12251; XX P0 A C G T 01 229 48 156 160 d 02 234 53 137 169 w 03 193 44 88 268 w 04 71 42 337 143 g 05 130 79 352 32 g 06 272 83 0 238 w 07 0 356 227 10 s 08 593 0 0 0 A 09 0 592 1 0 C 10 0 0 593 0 G 11 0 0 0 593 T 12 0 0 593 0 G 13 0 0 425 168 K 14 3 590 0 0 C 15 474 39 57 23 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AREB3.ampDAP:M0218:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VIP1.DAP/M0221/AthalianaCistrome XX ID VIP1.DAP:M0221:AthalianaCistrome XX NA VIP1.DAP XX DE VIP1.DAP XX OS Arabidopsis thaliana XX BF 12532; XX P0 A C G T 01 187 46 116 205 w 02 56 74 24 400 T 03 6 0 479 69 G 04 305 249 0 0 m 05 6 548 0 0 C 06 554 0 0 0 A 07 14 0 540 0 G 08 0 534 5 15 C 09 0 0 0 554 T 10 62 61 431 0 G 11 101 1 156 296 k 12 192 140 78 144 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VIP1.DAP:M0221:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF6.ampDAP/M0222/AthalianaCistrome XX ID GBF6.ampDAP:M0222:AthalianaCistrome XX NA GBF6.ampDAP XX DE GBF6.ampDAP XX OS Arabidopsis thaliana XX BF 12413; XX P0 A C G T 01 185 52 143 153 d 02 183 86 86 178 w 03 146 55 78 254 w 04 80 23 300 130 g 05 155 205 120 53 m 06 89 57 6 381 T 07 6 107 359 61 g 08 533 0 0 0 A 09 0 533 0 0 C 10 6 0 527 0 G 11 1 0 0 532 T 12 0 0 532 1 G 13 0 0 361 172 k 14 155 343 8 27 m 15 263 74 83 113 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF6.ampDAP:M0222:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP44.ampDAP/M0224/AthalianaCistrome XX ID bZIP44.ampDAP:M0224:AthalianaCistrome XX NA bZIP44.ampDAP XX DE bZIP44.ampDAP XX OS Arabidopsis thaliana XX BF 12578; XX P0 A C G T 01 222 66 90 163 w 02 143 34 56 308 w 03 25 3 443 70 G 04 158 327 54 2 m 05 0 31 0 510 T 06 0 6 487 48 G 07 541 0 0 0 A 08 0 531 0 10 C 09 3 1 537 0 G 10 3 0 0 538 T 11 0 0 541 0 G 12 1 0 431 109 G 13 113 421 2 5 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP44.ampDAP:M0224:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA3.ampDAP/M0226/AthalianaCistrome XX ID TGA3.ampDAP:M0226:AthalianaCistrome XX NA TGA3.ampDAP XX DE TGA3.ampDAP XX OS Arabidopsis thaliana XX BF 2887; XX P0 A C G T 01 126 95 54 258 t 02 68 36 407 22 G 03 280 175 78 0 m 04 2 0 0 531 T 05 0 1 480 52 G 06 533 0 0 0 A 07 0 512 0 21 C 08 6 1 526 0 G 09 0 0 0 533 T 10 2 531 0 0 C 11 533 0 0 0 A 12 3 213 69 248 y 13 142 167 66 158 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA3.ampDAP:M0226:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VIP1.ampDAP/M0227/AthalianaCistrome XX ID VIP1.ampDAP:M0227:AthalianaCistrome XX NA VIP1.ampDAP XX DE VIP1.ampDAP XX OS Arabidopsis thaliana XX BF 12532; XX P0 A C G T 01 105 50 91 167 w 02 117 42 143 111 d 03 94 70 108 141 k 04 232 114 0 67 m 05 20 311 40 42 C 06 399 0 14 0 A 07 5 4 404 0 G 08 0 405 0 8 C 09 0 0 0 413 T 10 0 0 413 0 G 11 0 4 199 210 k 12 55 351 0 7 C 13 307 20 45 41 A 14 143 87 42 141 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VIP1.ampDAP:M0227:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP42.ampDAP/M0228/AthalianaCistrome XX ID bZIP42.ampDAP:M0228:AthalianaCistrome XX NA bZIP42.ampDAP XX DE bZIP42.ampDAP XX OS Arabidopsis thaliana XX BF 12576; XX P0 A C G T 01 15 26 23 103 t 02 0 0 135 32 G 03 32 135 0 0 C 04 0 167 0 0 C 05 167 0 0 0 A 06 1 163 1 2 C 07 0 0 167 0 G 08 0 0 0 167 T 09 8 158 0 1 C 10 166 0 1 0 A 11 0 8 132 27 G 12 3 162 0 2 C 13 124 12 6 25 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP42.ampDAP:M0228:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP69.DAP/M0229/AthalianaCistrome XX ID bZIP69.DAP:M0229:AthalianaCistrome XX NA bZIP69.DAP XX DE bZIP69.DAP XX OS Arabidopsis thaliana XX BF 12582; XX P0 A C G T 01 29 12 76 85 k 02 130 65 6 1 m 03 1 200 1 0 C 04 201 0 1 0 A 05 6 1 195 0 G 06 0 202 0 0 C 07 0 0 0 202 T 08 0 0 202 0 G 09 0 0 105 97 k 10 13 182 3 4 C 11 155 7 23 17 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP69.DAP:M0229:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP69.ampDAP/M0231/AthalianaCistrome XX ID bZIP69.ampDAP:M0231:AthalianaCistrome XX NA bZIP69.ampDAP XX DE bZIP69.ampDAP XX OS Arabidopsis thaliana XX BF 12582; XX P0 A C G T 01 12 11 46 28 k 02 61 34 2 0 m 03 12 84 0 1 C 04 93 0 4 0 A 05 0 0 97 0 G 06 0 97 0 0 C 07 0 0 0 97 T 08 0 0 89 8 G 09 0 0 55 42 k 10 3 94 0 0 C 11 83 0 6 8 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP69.ampDAP:M0231:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g18890.ampDAP/M0237/AthalianaCistrome XX ID At4g18890.ampDAP:M0237:AthalianaCistrome XX NA At4g18890.ampDAP XX DE At4g18890.ampDAP XX OS Arabidopsis thaliana XX BF 12355; XX P0 A C G T 01 6 156 26 116 y 02 83 1 220 0 R 03 0 303 0 1 C 04 304 0 0 0 A 05 0 304 0 0 C 06 0 0 304 0 G 07 0 0 0 304 T 08 0 0 304 0 G 09 12 55 35 202 t 10 36 44 203 21 g 11 126 41 100 37 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g18890.ampDAP:M0237:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g36780.ampDAP/M0238/AthalianaCistrome XX ID At4g36780.ampDAP:M0238:AthalianaCistrome XX NA At4g36780.ampDAP XX DE At4g36780.ampDAP XX OS Arabidopsis thaliana XX BF 17752; XX P0 A C G T 01 54 50 26 106 t 02 10 162 26 38 C 03 121 12 98 5 r 04 0 232 0 4 C 05 236 0 0 0 A 06 0 236 0 0 C 07 0 0 236 0 G 08 0 0 0 236 T 09 0 2 233 1 G 10 0 105 0 131 y 11 67 0 166 3 R 12 36 98 75 27 s 13 91 58 46 41 a 14 23 39 39 135 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g36780.ampDAP:M0238:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g78700.ampDAP/M0239/AthalianaCistrome XX ID At1g78700.ampDAP:M0239:AthalianaCistrome XX NA At1g78700.ampDAP XX DE At1g78700.ampDAP XX OS Arabidopsis thaliana XX BF 12340; XX P0 A C G T 01 22 46 39 33 s 02 7 77 6 50 y 03 48 5 87 0 r 04 0 140 0 0 C 05 140 0 0 0 A 06 0 140 0 0 C 07 0 0 140 0 G 08 0 0 0 140 T 09 0 0 140 0 G 10 13 26 7 94 t 11 10 23 90 17 g 12 37 28 33 42 w 13 60 24 29 27 a 14 17 27 30 66 t 15 21 27 28 64 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g78700.ampDAP:M0239:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G59990.ampDAP/M0240/AthalianaCistrome XX ID AT5G59990.ampDAP:M0240:AthalianaCistrome XX NA AT5G59990.ampDAP XX DE AT5G59990.ampDAP XX OS Arabidopsis thaliana XX BF 12313; XX P0 A C G T 01 295 62 48 19 A 02 339 13 3 69 A 03 18 21 4 381 T 04 31 351 14 28 C 05 33 56 17 318 T 06 25 229 80 90 c 07 214 78 128 4 r 08 295 1 123 5 R 09 5 396 1 22 C 10 4 418 0 2 C 11 71 0 337 16 G 12 2 51 3 368 T 13 51 157 2 214 y 14 17 270 131 6 s 15 312 8 101 3 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G59990.ampDAP:M0240:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G59990.DAP/M0241/AthalianaCistrome XX ID AT5G59990.DAP:M0241:AthalianaCistrome XX NA AT5G59990.DAP XX DE AT5G59990.DAP XX OS Arabidopsis thaliana XX BF 12313; XX P0 A C G T 01 72 16 52 57 d 02 58 36 44 59 w 03 78 35 48 36 a 04 126 8 42 21 a 05 156 8 23 10 A 06 143 3 6 45 A 07 0 45 1 151 T 08 1 52 134 10 S 09 91 0 93 13 r 10 177 0 19 1 A 11 0 171 1 25 C 12 0 0 197 0 G 13 0 0 197 0 G 14 3 62 0 132 y 15 2 52 50 93 b 16 42 36 111 8 g 17 155 8 21 13 A 18 9 5 172 11 G 19 187 3 7 0 A 20 26 4 3 164 T 21 9 23 24 141 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G59990.DAP:M0241:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G27900.DAP/M0242/AthalianaCistrome XX ID AT4G27900.DAP:M0242:AthalianaCistrome XX NA AT4G27900.DAP XX DE AT4G27900.DAP XX OS Arabidopsis thaliana XX BF 17757; XX P0 A C G T 01 136 4 18 12 A 02 143 3 0 24 A 03 1 15 0 154 T 04 2 82 79 7 s 05 106 0 64 0 r 06 170 0 0 0 A 07 0 170 0 0 C 08 0 0 170 0 G 09 0 0 170 0 G 10 2 64 0 104 y 11 2 59 25 84 y 12 43 34 89 4 r 13 124 6 27 13 A 14 4 7 152 7 G 15 166 1 3 0 A 16 17 0 3 150 T 17 6 21 14 129 T 18 41 43 42 44 y 19 78 27 40 25 a 20 60 23 8 79 w 21 10 64 8 88 y 22 14 74 49 33 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G27900.DAP:M0242:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g62940.DAP/M0244/AthalianaCistrome XX ID At5g62940.DAP:M0244:AthalianaCistrome XX NA At5g62940.DAP XX DE At5g62940.DAP XX OS Arabidopsis thaliana XX BF 11007; XX P0 A C G T 01 285 67 153 95 r 02 306 61 111 122 a 03 300 53 109 138 a 04 315 54 123 108 a 05 330 55 113 102 a 06 333 53 118 96 a 07 319 66 105 110 a 08 242 73 154 131 r 09 150 139 208 103 r 10 434 56 72 38 A 11 487 0 0 113 A 12 600 0 0 0 A 13 600 0 0 0 A 14 597 0 3 0 A 15 0 0 600 0 G 16 88 83 149 280 t 17 296 36 104 164 w 18 394 13 153 40 r 19 403 65 52 80 a 20 292 71 87 150 w 21 307 45 101 147 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g62940.DAP:M0244:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G28810.ampDAP/M0245/AthalianaCistrome XX ID AT2G28810.ampDAP:M0245:AthalianaCistrome XX NA AT2G28810.ampDAP XX DE AT2G28810.ampDAP XX OS Arabidopsis thaliana XX BF 12279; XX P0 A C G T 01 82 80 121 317 t 02 57 124 48 371 t 03 116 154 57 273 y 04 277 137 110 76 a 05 0 600 0 0 C 06 0 38 0 562 T 07 0 0 0 600 T 08 0 0 0 600 T 09 151 0 0 449 W 10 8 78 1 513 T 11 102 185 195 118 s 12 126 167 94 213 y 13 95 143 106 256 t 14 95 140 60 305 t 15 132 87 45 336 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G28810.ampDAP:M0245:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G52440.ampDAP/M0247/AthalianaCistrome XX ID AT3G52440.ampDAP:M0247:AthalianaCistrome XX NA AT3G52440.ampDAP XX DE AT3G52440.ampDAP XX OS Arabidopsis thaliana XX BF 12295; XX P0 A C G T 01 288 66 60 186 w 02 265 71 73 191 w 03 179 59 149 213 w 04 113 53 127 307 t 05 62 115 48 375 t 06 218 137 26 219 w 07 319 156 76 49 m 08 0 600 0 0 C 09 0 1 0 599 T 10 0 0 0 600 T 11 0 0 0 600 T 12 105 2 0 493 T 13 41 66 20 473 T 14 120 165 165 150 b 15 144 166 79 211 y 16 112 173 61 254 y 17 97 128 70 305 t 18 76 116 55 353 t 19 79 128 46 347 t 20 120 67 49 364 t 21 124 83 50 343 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G52440.ampDAP:M0247:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g64620.ampDAP/M0251/AthalianaCistrome XX ID At1g64620.ampDAP:M0251:AthalianaCistrome XX NA At1g64620.ampDAP XX DE At1g64620.ampDAP XX OS Arabidopsis thaliana XX BF 10998; XX P0 A C G T 01 146 163 161 130 s 02 560 5 12 23 A 03 490 0 0 110 A 04 600 0 0 0 A 05 600 0 0 0 A 06 599 0 1 0 A 07 0 0 600 0 G 08 33 57 183 327 k 09 260 30 94 216 w 10 358 22 126 94 a 11 308 97 77 118 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g64620.ampDAP:M0251:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC dof24.DAP/M0252/AthalianaCistrome XX ID dof24.DAP:M0252:AthalianaCistrome XX NA dof24.DAP XX DE dof24.DAP XX OS Arabidopsis thaliana XX BF 10999; XX P0 A C G T 01 165 139 75 221 w 02 165 104 59 272 w 03 156 79 37 328 w 04 143 54 28 375 t 05 95 19 73 413 T 06 18 131 16 435 T 07 183 135 20 262 w 08 375 119 82 24 a 09 0 600 0 0 C 10 0 6 0 594 T 11 0 0 0 600 T 12 0 0 0 600 T 13 140 0 0 460 T 14 27 44 26 503 T 15 123 148 173 156 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=dof24.DAP:M0252:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC dof43.ampDAP/M0253/AthalianaCistrome XX ID dof43.ampDAP:M0253:AthalianaCistrome XX NA dof43.ampDAP XX DE dof43.ampDAP XX OS Arabidopsis thaliana XX BF 12392; XX P0 A C G T 01 246 60 38 236 w 02 579 0 1 0 A 03 579 0 0 1 A 04 577 0 3 0 A 05 1 0 577 2 G 06 55 331 85 109 c 07 44 200 1 335 y 08 249 53 103 175 w 09 0 580 0 0 C 10 0 0 0 580 T 11 0 0 0 580 T 12 0 0 0 580 T 13 224 67 37 252 w 14 126 108 118 228 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=dof43.ampDAP:M0253:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g45610.ampDAP/M0254/AthalianaCistrome XX ID At3g45610.ampDAP:M0254:AthalianaCistrome XX NA At3g45610.ampDAP XX DE At3g45610.ampDAP XX OS Arabidopsis thaliana XX BF 11001; XX P0 A C G T 01 135 122 98 245 t 02 148 76 76 300 t 03 129 113 58 300 t 04 132 70 87 311 t 05 119 55 101 325 t 06 39 128 26 407 t 07 206 101 70 223 w 08 260 198 83 59 m 09 0 600 0 0 C 10 0 1 0 599 T 11 0 0 0 600 T 12 0 0 0 600 T 13 138 0 2 460 T 14 13 61 28 498 T 15 67 196 222 115 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g45610.ampDAP:M0254:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G66940.ampDAP/M0257/AthalianaCistrome XX ID AT5G66940.ampDAP:M0257:AthalianaCistrome XX NA AT5G66940.ampDAP XX DE AT5G66940.ampDAP XX OS Arabidopsis thaliana XX BF 12317; XX P0 A C G T 01 126 100 108 266 t 02 132 103 95 270 t 03 130 113 70 287 t 04 145 81 84 290 t 05 97 66 88 349 t 06 46 151 33 370 y 07 136 88 15 361 t 08 339 80 139 42 a 09 0 600 0 0 C 10 1 3 0 596 T 11 0 0 0 600 T 12 0 0 0 600 T 13 105 0 0 495 T 14 53 70 61 416 T 15 93 197 170 140 s 16 105 183 81 231 y 17 85 123 59 333 t 18 60 109 54 377 t 19 92 87 65 356 t 20 93 116 76 315 t 21 106 94 56 344 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G66940.ampDAP:M0257:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G02460.ampDAP/M0258/AthalianaCistrome XX ID AT5G02460.ampDAP:M0258:AthalianaCistrome XX NA AT5G02460.ampDAP XX DE AT5G02460.ampDAP XX OS Arabidopsis thaliana XX BF 12305; XX P0 A C G T 01 162 127 79 232 w 02 157 81 73 289 w 03 108 68 91 333 t 04 58 123 18 401 t 05 179 105 28 288 w 06 397 84 98 21 a 07 0 600 0 0 C 08 0 2 0 598 T 09 0 0 0 600 T 10 0 0 0 600 T 11 155 1 12 432 W 12 35 52 41 472 T 13 100 126 168 206 k 14 124 106 131 239 t 15 138 146 72 244 t 16 125 100 96 279 t 17 130 111 82 277 t 18 163 114 66 257 w 19 178 80 77 265 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G02460.ampDAP:M0258:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDF3.ampDAP/M0259/AthalianaCistrome XX ID CDF3.ampDAP:M0259:AthalianaCistrome XX NA CDF3.ampDAP XX DE CDF3.ampDAP XX OS Arabidopsis thaliana XX BF 11002; XX P0 A C G T 01 120 61 102 317 t 02 93 42 160 305 k 03 82 278 11 229 y 04 376 57 89 78 a 05 0 600 0 0 C 06 0 33 0 567 T 07 0 0 0 600 T 08 0 0 0 600 T 09 76 20 13 491 T 10 77 110 70 343 t 11 115 203 121 161 y 12 160 156 81 203 h 13 78 202 73 247 y 14 70 132 46 352 t 15 46 89 26 439 T 16 48 97 23 432 T 17 73 80 38 409 T 18 106 76 78 340 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDF3.ampDAP:M0259:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OBP4.ampDAP/M0261/AthalianaCistrome XX ID OBP4.ampDAP:M0261:AthalianaCistrome XX NA OBP4.ampDAP XX DE OBP4.ampDAP XX OS Arabidopsis thaliana XX BF 11006; XX P0 A C G T 01 283 64 81 172 w 02 256 79 127 138 a 03 298 70 94 138 a 04 328 75 111 86 a 05 243 88 146 123 a 06 221 119 137 123 a 07 145 203 143 109 c 08 527 6 31 36 A 09 483 0 0 117 A 10 600 0 0 0 A 11 600 0 0 0 A 12 583 0 17 0 A 13 0 0 600 0 G 14 54 84 135 327 t 15 263 37 88 212 w 16 344 42 130 84 a 17 331 106 63 100 a 18 274 71 72 183 w 19 273 68 88 171 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OBP4.ampDAP:M0261:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g64620.DAP/M0263/AthalianaCistrome XX ID At1g64620.DAP:M0263:AthalianaCistrome XX NA At1g64620.DAP XX DE At1g64620.DAP XX OS Arabidopsis thaliana XX BF 10998; XX P0 A C G T 01 303 50 80 167 w 02 255 64 109 172 w 03 282 88 109 121 a 04 299 67 105 129 a 05 288 80 113 119 a 06 213 111 137 139 a 07 177 169 128 126 m 08 507 27 47 19 A 09 513 0 0 87 A 10 600 0 0 0 A 11 600 0 0 0 A 12 600 0 0 0 A 13 0 0 600 0 G 14 53 61 168 318 k 15 233 28 106 233 w 16 406 13 125 56 a 17 375 59 50 116 a 18 324 58 63 155 w 19 298 51 78 173 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g64620.DAP:M0263:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DAG2.ampDAP/M0266/AthalianaCistrome XX ID DAG2.ampDAP:M0266:AthalianaCistrome XX NA DAG2.ampDAP XX DE DAG2.ampDAP XX OS Arabidopsis thaliana XX BF 12119; XX P0 A C G T 01 140 191 143 124 c 02 529 2 42 25 A 03 457 0 0 141 A 04 598 0 0 0 A 05 598 0 0 0 A 06 596 0 2 0 A 07 0 0 598 0 G 08 1 21 214 362 k 09 142 70 159 227 k 10 403 25 122 48 a 11 300 116 39 143 a 12 238 82 46 232 w 13 216 58 86 238 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DAG2.ampDAP:M0266:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDF3.DAP/M0268/AthalianaCistrome XX ID CDF3.DAP:M0268:AthalianaCistrome XX NA CDF3.DAP XX DE CDF3.DAP XX OS Arabidopsis thaliana XX BF 11002; XX P0 A C G T 01 353 53 71 123 a 02 339 27 117 117 a 03 333 47 113 107 a 04 301 36 149 114 a 05 272 73 137 118 a 06 195 93 178 134 r 07 142 144 175 139 g 08 455 31 79 35 A 09 512 0 3 85 A 10 600 0 0 0 A 11 600 0 0 0 A 12 584 0 16 0 A 13 0 0 600 0 G 14 29 56 131 384 t 15 165 20 328 87 r 16 317 141 27 115 a 17 392 86 36 86 a 18 338 64 49 149 a 19 360 69 88 83 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDF3.DAP:M0268:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC dof24.ampDAP/M0269/AthalianaCistrome XX ID dof24.ampDAP:M0269:AthalianaCistrome XX NA dof24.ampDAP XX DE dof24.ampDAP XX OS Arabidopsis thaliana XX BF 10999; XX P0 A C G T 01 261 80 102 154 w 02 265 63 107 162 w 03 287 76 95 139 a 04 237 93 134 133 a 05 233 122 126 116 a 06 122 202 137 136 c 07 551 0 29 17 A 08 433 0 0 164 W 09 597 0 0 0 A 10 597 0 0 0 A 11 580 0 17 0 A 12 0 0 597 0 G 13 10 55 120 412 T 14 215 32 173 177 d 15 324 38 146 89 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=dof24.ampDAP:M0269:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g38000.DAP/M0270/AthalianaCistrome XX ID At4g38000.DAP:M0270:AthalianaCistrome XX NA At4g38000.DAP XX DE At4g38000.DAP XX OS Arabidopsis thaliana XX BF 11003; XX P0 A C G T 01 149 139 56 225 w 02 126 100 38 305 t 03 90 91 56 332 t 04 96 96 28 349 t 05 85 105 24 355 t 06 94 101 36 338 t 07 145 108 27 289 w 08 126 87 62 294 t 09 112 89 72 296 t 10 95 138 18 318 t 11 86 92 34 357 t 12 93 87 33 356 t 13 93 101 32 343 t 14 128 102 57 282 t 15 119 114 57 279 t 16 91 100 50 328 t 17 98 59 37 375 t 18 91 55 56 367 t 19 36 109 2 422 T 20 210 42 28 289 w 21 289 62 71 147 w 22 0 516 1 52 C 23 11 19 0 539 T 24 0 25 0 544 T 25 0 2 0 567 T 26 129 14 0 426 T 27 46 60 27 436 T 28 146 117 88 218 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g38000.DAP:M0270:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G47655.ampDAP/M0271/AthalianaCistrome XX ID AT1G47655.ampDAP:M0271:AthalianaCistrome XX NA AT1G47655.ampDAP XX DE AT1G47655.ampDAP XX OS Arabidopsis thaliana XX BF 12267; XX P0 A C G T 01 50 188 62 271 y 02 75 208 0 288 y 03 42 109 41 379 t 04 51 47 30 443 T 05 15 120 12 424 T 06 78 66 79 348 t 07 130 97 134 210 t 08 0 551 5 15 C 09 0 42 0 529 T 10 0 12 0 559 T 11 4 51 0 516 T 12 94 63 61 353 t 13 29 108 82 352 t 14 53 183 138 197 y 15 116 119 72 264 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G47655.ampDAP:M0271:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G69570.ampDAP/M0273/AthalianaCistrome XX ID AT1G69570.ampDAP:M0273:AthalianaCistrome XX NA AT1G69570.ampDAP XX DE AT1G69570.ampDAP XX OS Arabidopsis thaliana XX BF 12270; XX P0 A C G T 01 248 98 103 149 a 02 285 81 93 139 a 03 343 88 100 67 a 04 343 60 86 109 a 05 304 86 138 70 a 06 312 67 94 125 a 07 313 56 146 83 a 08 307 51 148 92 a 09 375 38 81 104 a 10 428 24 81 65 A 11 399 55 88 56 a 12 333 57 132 76 a 13 172 86 260 80 r 14 350 78 92 78 a 15 430 16 25 127 A 16 598 0 0 0 A 17 598 0 0 0 A 18 586 0 12 0 A 19 0 0 598 0 G 20 51 110 90 347 t 21 203 24 292 79 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G69570.ampDAP:M0273:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OBP3.ampDAP/M0274/AthalianaCistrome XX ID OBP3.ampDAP:M0274:AthalianaCistrome XX NA OBP3.ampDAP XX DE OBP3.ampDAP XX OS Arabidopsis thaliana XX BF 17749; XX P0 A C G T 01 123 119 76 282 t 02 142 113 59 286 t 03 120 93 84 303 t 04 154 85 23 338 w 05 115 99 75 311 t 06 117 99 82 302 t 07 111 152 47 290 y 08 87 87 68 358 t 09 84 77 93 346 t 10 67 136 18 379 t 11 182 78 47 293 w 12 228 114 115 143 a 13 0 600 0 0 C 14 0 9 0 591 T 15 0 1 0 599 T 16 0 0 0 600 T 17 93 44 23 440 T 18 77 81 65 377 t 19 144 138 156 162 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OBP3.ampDAP:M0274:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g38000.ampDAP/M0275/AthalianaCistrome XX ID At4g38000.ampDAP:M0275:AthalianaCistrome XX NA At4g38000.ampDAP XX DE At4g38000.ampDAP XX OS Arabidopsis thaliana XX BF 11003; XX P0 A C G T 01 131 181 213 74 s 02 524 23 24 28 A 03 423 0 0 176 W 04 599 0 0 0 A 05 599 0 0 0 A 06 599 0 0 0 A 07 0 0 599 0 G 08 20 46 110 423 T 09 231 35 74 259 w 10 346 35 145 73 a 11 302 80 90 127 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g38000.ampDAP:M0275:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC COG1.ampDAP/M0276/AthalianaCistrome XX ID COG1.ampDAP:M0276:AthalianaCistrome XX NA COG1.ampDAP XX DE COG1.ampDAP XX OS Arabidopsis thaliana XX BF 10997; XX P0 A C G T 01 154 152 85 204 h 02 138 109 45 303 t 03 115 82 46 352 t 04 150 37 45 363 w 05 79 21 51 444 T 06 118 13 163 301 k 07 57 347 1 190 y 08 442 82 46 25 A 09 0 595 0 0 C 10 0 0 0 595 T 11 0 0 0 595 T 12 0 0 0 595 T 13 141 0 0 454 T 14 43 35 21 496 T 15 113 156 155 171 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=COG1.ampDAP:M0276:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Adof1.ampDAP/M0277/AthalianaCistrome XX ID Adof1.ampDAP:M0277:AthalianaCistrome XX NA Adof1.ampDAP XX DE Adof1.ampDAP XX OS Arabidopsis thaliana XX BF 12218; XX P0 A C G T 01 314 50 100 127 a 02 249 75 153 114 r 03 320 79 97 95 a 04 315 55 112 109 a 05 266 71 125 129 a 06 228 99 119 145 a 07 133 172 187 99 s 08 477 34 51 29 A 09 457 22 6 106 A 10 591 0 0 0 A 11 591 0 0 0 A 12 585 0 6 0 A 13 0 0 591 0 G 14 8 133 77 373 t 15 324 44 64 159 w 16 380 28 135 48 a 17 296 106 94 95 a 18 271 93 76 151 w 19 221 66 143 161 w 20 238 111 94 148 w 21 185 150 81 175 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Adof1.ampDAP:M0277:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC dof45.ampDAP/M0280/AthalianaCistrome XX ID dof45.ampDAP:M0280:AthalianaCistrome XX NA dof45.ampDAP XX DE dof45.ampDAP XX OS Arabidopsis thaliana XX BF 12393; XX P0 A C G T 01 174 94 128 126 a 02 281 80 57 104 a 03 271 10 44 197 w 04 512 2 7 1 A 05 516 0 3 3 A 06 519 0 3 0 A 07 0 0 522 0 G 08 87 81 27 327 t 09 354 3 132 33 r 10 131 50 275 66 r 11 0 516 2 4 C 12 0 0 0 522 T 13 1 0 0 521 T 14 6 0 4 512 T 15 213 37 49 223 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=dof45.ampDAP:M0280:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC dof43.DAP/M0281/AthalianaCistrome XX ID dof43.DAP:M0281:AthalianaCistrome XX NA dof43.DAP XX DE dof43.DAP XX OS Arabidopsis thaliana XX BF 12392; XX P0 A C G T 01 62 0 0 0 A 02 62 0 0 0 A 03 61 1 0 0 A 04 1 1 59 1 G 05 11 24 11 16 y 06 0 21 0 41 y 07 39 3 14 6 a 08 0 62 0 0 C 09 0 0 0 62 T 10 0 0 0 62 T 11 0 0 0 62 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=dof43.DAP:M0281:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA20.ampDAP/M0282/AthalianaCistrome XX ID GATA20.ampDAP:M0282:AthalianaCistrome XX NA GATA20.ampDAP XX DE GATA20.ampDAP XX OS Arabidopsis thaliana XX BF 12410; XX P0 A C G T 01 78 142 75 305 t 02 147 156 145 152 y 03 24 0 576 0 G 04 599 0 1 0 A 05 0 0 0 600 T 06 0 560 13 27 C 07 112 126 195 167 k 08 62 42 469 27 G 09 445 29 84 42 A 10 74 15 19 492 T 11 43 218 94 245 y 12 194 123 142 141 a 13 166 69 191 174 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA20.ampDAP:M0282:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA15.DAP/M0283/AthalianaCistrome XX ID GATA15.DAP:M0283:AthalianaCistrome XX NA GATA15.DAP XX DE GATA15.DAP XX OS Arabidopsis thaliana XX BF 11096; XX P0 A C G T 01 3 238 86 15 S 02 323 0 5 14 A 03 4 16 0 322 T 04 7 255 72 8 C 05 331 0 7 4 A 06 1 12 0 329 T 07 7 302 15 18 C 08 312 7 4 19 A 09 18 25 6 293 T 10 21 243 61 17 C 11 308 2 13 19 A 12 12 17 7 306 T 13 15 298 11 18 C 14 287 4 17 34 A 15 10 26 13 293 T 16 38 242 60 2 C 17 290 13 21 18 A 18 43 8 2 289 T 19 19 267 20 36 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA15.DAP:M0283:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA11.DAP/M0284/AthalianaCistrome XX ID GATA11.DAP:M0284:AthalianaCistrome XX NA GATA11.DAP XX DE GATA11.DAP XX OS Arabidopsis thaliana XX BF 11094; XX P0 A C G T 01 270 40 168 106 r 02 204 69 218 93 r 03 352 44 79 109 a 04 149 29 43 363 w 05 78 266 35 205 y 06 0 254 20 310 y 07 420 4 160 0 R 08 24 0 560 0 G 09 584 0 0 0 A 10 0 0 0 584 T 11 0 584 0 0 C 12 1 39 11 533 T 13 127 59 361 37 g 14 353 46 133 52 a 15 184 44 183 173 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA11.DAP:M0284:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA12.DAP/M0285/AthalianaCistrome XX ID GATA12.DAP:M0285:AthalianaCistrome XX NA GATA12.DAP XX DE GATA12.DAP XX OS Arabidopsis thaliana XX BF 8876; XX P0 A C G T 01 182 46 253 110 r 02 383 61 34 113 a 03 135 39 41 376 t 04 69 272 29 221 y 05 0 355 15 221 y 06 501 20 70 0 A 07 1 0 590 0 G 08 591 0 0 0 A 09 1 0 0 590 T 10 0 582 0 9 C 11 11 177 1 402 Y 12 271 57 229 34 r 13 318 47 144 82 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA12.DAP:M0285:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA1.ampDAP/M0286/AthalianaCistrome XX ID GATA1.ampDAP:M0286:AthalianaCistrome XX NA GATA1.ampDAP XX DE GATA1.ampDAP XX OS Arabidopsis thaliana XX BF 7509; XX P0 A C G T 01 186 90 244 71 r 02 348 43 173 27 r 03 254 15 36 286 w 04 45 213 19 314 y 05 0 296 17 278 y 06 358 57 176 0 r 07 7 0 584 0 G 08 591 0 0 0 A 09 0 0 0 591 T 10 0 590 0 1 C 11 13 69 33 476 T 12 211 46 255 79 r 13 269 80 161 81 r 14 266 63 148 114 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA1.ampDAP:M0286:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA4.DAP/M0287/AthalianaCistrome XX ID GATA4.DAP:M0287:AthalianaCistrome XX NA GATA4.DAP XX DE GATA4.DAP XX OS Arabidopsis thaliana XX BF 7512; XX P0 A C G T 01 159 101 39 295 w 02 100 154 80 260 y 03 101 182 80 231 y 04 35 274 63 222 y 05 340 62 163 29 r 06 29 0 565 0 G 07 594 0 0 0 A 08 0 0 0 594 T 09 0 561 0 33 C 10 0 190 43 361 y 11 244 9 341 0 r 12 318 9 216 51 r 13 305 24 23 242 w 14 32 167 18 377 y 15 71 300 32 191 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA4.DAP:M0287:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA1.DAP/M0288/AthalianaCistrome XX ID GATA1.DAP:M0288:AthalianaCistrome XX NA GATA1.DAP XX DE GATA1.DAP XX OS Arabidopsis thaliana XX BF 7509; XX P0 A C G T 01 144 0 78 2 r 02 14 51 4 155 T 03 0 1 223 0 G 04 88 11 105 20 r 05 20 45 0 159 T 06 31 0 177 16 G 07 128 5 83 8 r 08 18 19 13 174 T 09 16 0 200 8 G 10 98 21 75 30 r 11 32 33 0 159 T 12 4 11 204 5 G 13 136 0 80 8 r 14 17 14 17 176 T 15 15 24 176 9 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA1.DAP:M0288:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA12.ampDAP/M0289/AthalianaCistrome XX ID GATA12.ampDAP:M0289:AthalianaCistrome XX NA GATA12.ampDAP XX DE GATA12.ampDAP XX OS Arabidopsis thaliana XX BF 8876; XX P0 A C G T 01 24 216 47 285 y 02 364 16 174 18 r 03 17 0 555 0 G 04 572 0 0 0 A 05 0 0 0 572 T 06 0 572 0 0 C 07 0 78 20 474 T 08 207 9 335 21 r 09 263 17 269 23 r 10 366 16 26 164 w 11 56 92 50 374 t 12 57 258 60 197 y 13 112 112 104 244 t 14 158 63 223 128 r 15 196 78 183 115 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA12.ampDAP:M0289:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZIM.DAP/M0290/AthalianaCistrome XX ID ZIM.DAP:M0290:AthalianaCistrome XX NA ZIM.DAP XX DE ZIM.DAP XX OS Arabidopsis thaliana XX BF 17759; XX P0 A C G T 01 8 33 7 545 T 02 80 415 25 73 C 03 92 87 34 380 t 04 24 246 147 176 y 05 343 51 197 2 r 06 325 0 256 12 r 07 1 576 5 11 C 08 1 589 0 3 C 09 2 0 580 11 G 10 3 0 0 590 T 11 25 173 0 395 y 12 60 194 326 13 s 13 186 1 401 5 r 14 401 13 5 174 w 15 18 27 17 531 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZIM.DAP:M0290:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZML1.ampDAP/M0291/AthalianaCistrome XX ID ZML1.ampDAP:M0291:AthalianaCistrome XX NA ZML1.ampDAP XX DE ZML1.ampDAP XX OS Arabidopsis thaliana XX BF 17744; XX P0 A C G T 01 232 51 85 180 w 02 92 101 94 261 t 03 170 139 123 116 m 04 381 51 97 19 A 05 448 12 5 83 A 06 5 45 7 491 T 07 65 435 18 30 C 08 67 73 44 364 t 09 28 276 101 143 y 10 308 58 174 8 r 11 293 2 213 40 r 12 5 540 2 1 C 13 23 521 1 3 C 14 4 2 510 32 G 15 3 25 7 513 T 16 40 192 2 314 y 17 41 211 260 36 s 18 249 28 266 5 r 19 307 1 5 235 w 20 29 47 23 449 T 21 53 200 37 258 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZML1.ampDAP:M0291:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZML1.DAP/M0292/AthalianaCistrome XX ID ZML1.DAP:M0292:AthalianaCistrome XX NA ZML1.DAP XX DE ZML1.DAP XX OS Arabidopsis thaliana XX BF 17744; XX P0 A C G T 01 15 30 2 462 T 02 6 480 18 5 C 03 494 2 4 9 A 04 11 19 0 479 T 05 4 484 12 9 C 06 488 8 3 10 A 07 2 7 0 500 T 08 0 508 0 1 C 09 482 0 21 6 A 10 12 23 7 467 T 11 13 480 7 9 C 12 490 3 0 16 A 13 5 4 0 500 T 14 9 500 0 0 C 15 428 21 26 34 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZML1.DAP:M0292:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA19.ampDAP/M0295/AthalianaCistrome XX ID GATA19.ampDAP:M0295:AthalianaCistrome XX NA GATA19.ampDAP XX DE GATA19.ampDAP XX OS Arabidopsis thaliana XX BF 12409; XX P0 A C G T 01 45 131 36 104 y 02 88 69 96 63 r 03 17 3 296 0 G 04 316 0 0 0 A 05 0 0 0 316 T 06 0 296 14 6 C 07 6 83 160 67 s 08 25 0 291 0 G 09 245 4 56 11 A 10 42 10 0 264 T 11 0 130 39 147 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA19.ampDAP:M0295:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZML2.DAP/M0296/AthalianaCistrome XX ID ZML2.DAP:M0296:AthalianaCistrome XX NA ZML2.DAP XX DE ZML2.DAP XX OS Arabidopsis thaliana XX BF 11095; XX P0 A C G T 01 1 92 5 2 C 02 0.93 0.04 0.03 0 A 03 0 0.08 0 0.92 T 04 0 0.94 0.02 0.03 C 05 88 2 5 5 A 06 0 0.01 0.01 0.98 T 07 0 0.97 0 0.03 C 08 85 9 2 4 A 09 0.06 0.04 0 0.89 T 10 0 0.94 0 0.06 C 11 0.82 0 0.07 0.11 A 12 4 6 6 84 T 13 4 90 1 5 C 14 0.81 0 0.06 0.13 A 15 3 1 2 94 T 16 0.05 0.88 0.06 0 C 17 88 2 4 6 A 18 11 10 2 77 T 19 5 82 1 12 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZML2.DAP:M0296:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA16.DAP/M0298/AthalianaCistrome XX ID GATA16.DAP:M0298:AthalianaCistrome XX NA GATA16.DAP XX DE GATA16.DAP XX OS Arabidopsis thaliana XX BF 12408; XX P0 A C G T 01 3 44 1 0 C 02 40 1 1 6 A 03 5 1 3 39 T 04 0 32 13 3 s 05 37 4 2 5 A 06 3 4 0 41 T 07 3 41 4 0 C 08 45 1 0 2 A 09 1 2 0 45 T 10 0 37 10 1 C 11 48 0 0 0 A 12 0 2 3 43 T 13 1 36 5 6 C 14 41 0 6 1 A 15 1 2 0 45 T 16 2 33 9 4 C 17 40 6 2 0 A 18 3 0 0 45 T 19 6 37 4 1 C 20 48 0 0 0 A 21 0 4 0 44 T 22 3 37 8 0 C 23 43 0 4 1 A 24 0 6 0 42 T 25 1 44 2 1 C 26 46 0 0 2 A 27 4 3 0 41 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA16.DAP:M0298:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRC.DAP/M0300/AthalianaCistrome XX ID CRC.DAP:M0300:AthalianaCistrome XX NA CRC.DAP XX DE CRC.DAP XX OS Arabidopsis thaliana XX BF 12384; XX P0 A C G T 01 161 36 44 359 w 02 597 3 0 0 A 03 0 0 0 600 T 04 0 7 593 0 G 05 583 0 0 17 A 06 3 0 0 597 T 07 218 1 29 352 w 08 445 48 86 21 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRC.DAP:M0300:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRC.ampDAP/M0301/AthalianaCistrome XX ID CRC.ampDAP:M0301:AthalianaCistrome XX NA CRC.ampDAP XX DE CRC.ampDAP XX OS Arabidopsis thaliana XX BF 12384; XX P0 A C G T 01 1 35 0 0 C 02 36 0 0 0 A 03 36 0 0 0 A 04 0 0 36 0 G 05 0 0 0 36 T 06 0 35 0 1 C 07 36 0 0 0 A 08 0 0 0 36 T 09 36 0 0 0 A 10 0 1 0 35 T 11 0 0 0 36 T 12 0 33 0 3 C 13 0 1 34 1 G 14 36 0 0 0 A 15 0 36 0 0 C 16 0 0 0 36 T 17 0 34 0 2 C 18 0 32 1 3 C 19 35 0 1 0 A 20 36 0 0 0 A 21 36 0 0 0 A 22 36 0 0 0 A 23 1 35 0 0 C 24 36 0 0 0 A 25 0 36 0 0 C 26 2 0 0 34 T 27 36 0 0 0 A 28 36 0 0 0 A 29 0 36 0 0 C 30 0 35 0 1 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRC.ampDAP:M0301:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SGR5.ampDAP/M0303/AthalianaCistrome XX ID SGR5.ampDAP:M0303:AthalianaCistrome XX NA SGR5.ampDAP XX DE SGR5.ampDAP XX OS Arabidopsis thaliana XX BF 17732; XX P0 A C G T 01 112 79 57 350 t 02 37 68 21 472 T 03 0 14 2 582 T 04 0 3 0 595 T 05 0 0 598 0 G 06 0 0 1 597 T 07 0 568 0 30 C 08 43 39 0 516 T 09 0 158 34 406 y 10 186 59 44 309 w 11 143 45 5 405 t 12 86 126 69 317 t 13 59 161 81 297 y 14 117 88 119 274 t 15 148 112 137 201 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SGR5.ampDAP:M0303:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC STZ.ampDAP/M0304/AthalianaCistrome XX ID STZ.ampDAP:M0304:AthalianaCistrome XX NA STZ.ampDAP XX DE STZ.ampDAP XX OS Arabidopsis thaliana XX BF 10728; XX P0 A C G T 01 323 66 21 189 w 02 36 275 212 76 s 03 102 135 24 338 t 04 122 131 0 346 t 05 0 580 0 19 C 06 599 0 0 0 A 07 0 532 67 0 C 08 0 0 0 599 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=STZ.ampDAP:M0304:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G26030.DAP/M0306/AthalianaCistrome XX ID AT4G26030.DAP:M0306:AthalianaCistrome XX NA AT4G26030.DAP XX DE AT4G26030.DAP XX OS Arabidopsis thaliana XX BF 12302; XX P0 A C G T 01 136 223 72 160 y 02 204 149 82 156 h 03 206 156 104 125 m 04 169 171 61 190 h 05 223 130 56 182 w 06 195 114 98 184 w 07 122 182 88 199 y 08 63 199 57 272 y 09 59 217 34 281 y 10 0 400 4 187 y 11 591 0 0 0 A 12 102 484 0 5 C 13 0 591 0 0 C 14 324 30 0 237 w 15 588 0 0 3 A 16 184 401 0 6 m 17 56 353 0 182 y 18 220 111 40 220 w 19 124 206 21 240 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G26030.DAP:M0306:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g60580.DAP/M0307/AthalianaCistrome XX ID At3g60580.DAP:M0307:AthalianaCistrome XX NA At3g60580.DAP XX DE At3g60580.DAP XX OS Arabidopsis thaliana XX BF 12353; XX P0 A C G T 01 227 33 110 230 w 02 78 70 248 204 k 03 267 0 20 313 w 04 600 0 0 0 A 05 0 0 600 0 G 06 0 2 0 598 T 07 513 0 87 0 A 08 252 12 313 23 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g60580.DAP:M0307:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g04390.DAP/M0308/AthalianaCistrome XX ID At5g04390.DAP:M0308:AthalianaCistrome XX NA At5g04390.DAP XX DE At5g04390.DAP XX OS Arabidopsis thaliana XX BF 10732; XX P0 A C G T 01 152 108 166 173 d 02 599 0 0 0 A 03 0 22 577 0 G 04 0 0 0 599 T 05 9 0 590 0 G 06 335 0 102 162 w 07 305 53 79 162 w 08 176 72 264 87 r 09 123 71 176 229 k 10 196 35 128 240 w 11 202 50 242 105 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g04390.DAP:M0308:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC IDD5.ampDAP/M0309/AthalianaCistrome XX ID IDD5.ampDAP:M0309:AthalianaCistrome XX NA IDD5.ampDAP XX DE IDD5.ampDAP XX OS Arabidopsis thaliana XX BF 12432; XX P0 A C G T 01 180 63 82 274 w 02 168 79 90 262 w 03 97 61 42 399 t 04 16 46 18 519 T 05 0 6 5 588 T 06 0 2 0 597 T 07 0 0 599 0 G 08 0 0 66 533 T 09 19 527 0 53 C 10 48 55 274 222 k 11 4 43 60 492 T 12 14 108 39 438 T 13 112 0 4 483 T 14 130 17 4 448 T 15 39 238 258 64 s 16 15 164 14 406 y 17 110 60 255 174 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=IDD5.ampDAP:M0309:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g66730.ampDAP/M0310/AthalianaCistrome XX ID At5g66730.ampDAP:M0310:AthalianaCistrome XX NA At5g66730.ampDAP XX DE At5g66730.ampDAP XX OS Arabidopsis thaliana XX BF 12368; XX P0 A C G T 01 175 67 77 276 w 02 154 83 100 258 w 03 68 30 30 467 T 04 5 20 8 562 T 05 0 3 4 588 T 06 0 2 0 593 T 07 0 0 595 0 G 08 0 1 3 591 T 09 0 595 0 0 C 10 16 57 373 149 k 11 2 24 27 542 T 12 86 79 37 393 t 13 104 1 2 488 T 14 142 55 19 379 t 15 64 193 181 157 b 16 56 142 77 320 t 17 148 65 210 172 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g66730.ampDAP:M0310:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WIP5.ampDAP/M0311/AthalianaCistrome XX ID WIP5.ampDAP:M0311:AthalianaCistrome XX NA WIP5.ampDAP XX DE WIP5.ampDAP XX OS Arabidopsis thaliana XX BF 12539; XX P0 A C G T 01 194 62 41 280 w 02 398 56 115 8 A 03 56 459 46 16 C 04 26 545 0 6 C 05 0 72 54 451 T 06 143 71 263 100 g 07 34 155 382 6 s 08 502 10 44 21 A 09 0 53 394 130 G 10 304 120 33 120 a 11 413 25 71 68 A 12 145 199 103 130 m 13 406 32 96 43 A 14 262 33 18 264 w 15 289 84 145 59 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WIP5.ampDAP:M0311:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G22990.DAP/M0312/AthalianaCistrome XX ID AT5G22990.DAP:M0312:AthalianaCistrome XX NA AT5G22990.DAP XX DE AT5G22990.DAP XX OS Arabidopsis thaliana XX BF 12308; XX P0 A C G T 01 169 79 10 326 w 02 0 571 0 13 C 03 32 2 528 22 G 04 220 13 28 323 w 05 133 269 41 141 c 06 249 3 108 224 w 07 44 51 2 487 T 08 0 584 0 0 C 09 17 4 547 16 G 10 232 25 20 307 w 11 81 187 41 275 y 12 125 129 125 205 t 13 122 120 55 287 t 14 87 272 96 129 c 15 162 83 195 144 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G22990.DAP:M0312:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MGP.ampDAP/M0314/AthalianaCistrome XX ID MGP.ampDAP:M0314:AthalianaCistrome XX NA MGP.ampDAP XX DE MGP.ampDAP XX OS Arabidopsis thaliana XX BF 12446; XX P0 A C G T 01 154 119 82 237 w 02 172 76 78 266 w 03 142 68 99 283 t 04 76 36 28 452 T 05 5 24 5 558 T 06 0 2 3 587 T 07 0 0 0 592 T 08 0 0 592 0 G 09 0 0 0 592 T 10 0 590 0 2 C 11 12 46 410 124 G 12 2 19 22 549 T 13 91 77 35 389 t 14 80 0 0 512 T 15 149 52 12 379 w 16 69 198 195 130 s 17 33 136 63 360 t 18 133 49 234 176 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MGP.ampDAP:M0314:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WIP5.DAP/M0315/AthalianaCistrome XX ID WIP5.DAP:M0315:AthalianaCistrome XX NA WIP5.DAP XX DE WIP5.DAP XX OS Arabidopsis thaliana XX BF 12539; XX P0 A C G T 01 201 70 45 241 w 02 371 54 117 15 a 03 61 421 65 10 C 04 31 520 0 6 C 05 7 87 48 415 T 06 131 45 290 91 g 07 32 140 376 9 s 08 495 15 30 17 A 09 0 41 389 127 G 10 308 114 36 99 a 11 410 15 72 60 A 12 120 225 104 108 c 13 406 30 81 40 A 14 262 17 8 270 w 15 275 79 150 53 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WIP5.DAP:M0315:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtIDD11.ampDAP/M0316/AthalianaCistrome XX ID AtIDD11.ampDAP:M0316:AthalianaCistrome XX NA AtIDD11.ampDAP XX DE AtIDD11.ampDAP XX OS Arabidopsis thaliana XX BF 17750; XX P0 A C G T 01 147 133 89 216 w 02 171 64 68 282 w 03 170 69 84 262 w 04 100 45 41 399 T 05 12 37 18 518 T 06 3 14 7 561 T 07 0 0 0 585 T 08 0 0 585 0 G 09 0 0 5 580 T 10 2 579 0 4 C 11 20 44 399 122 G 12 3 24 23 535 T 13 86 83 41 375 t 14 88 1 1 495 T 15 138 42 7 398 T 16 79 189 194 123 s 17 49 122 51 363 t 18 135 66 217 167 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtIDD11.ampDAP:M0316:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G15740.DAP/M0317/AthalianaCistrome XX ID AT2G15740.DAP:M0317:AthalianaCistrome XX NA AT2G15740.DAP XX DE AT2G15740.DAP XX OS Arabidopsis thaliana XX BF 12276; XX P0 A C G T 01 347 8 202 43 r 02 295 24 40 241 w 03 0 599 0 1 C 04 7 0 593 0 G 05 366 1 168 65 r 06 118 169 0 313 y 07 122 21 339 118 g 08 326 50 112 112 a 09 58 479 6 57 C 10 40 22 525 13 G 11 322 16 91 171 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G15740.DAP:M0317:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC IDD2.ampDAP/M0320/AthalianaCistrome XX ID IDD2.ampDAP:M0320:AthalianaCistrome XX NA IDD2.ampDAP XX DE IDD2.ampDAP XX OS Arabidopsis thaliana XX BF 12430; XX P0 A C G T 01 144 134 92 208 t 02 165 76 95 242 w 03 152 78 109 239 w 04 81 59 31 407 T 05 6 40 13 519 T 06 1 0 8 569 T 07 0 0 0 578 T 08 0 0 578 0 G 09 0 0 6 572 T 10 0 567 0 11 C 11 15 53 345 165 k 12 5 36 30 507 T 13 93 97 49 339 t 14 121 0 5 452 T 15 119 61 12 386 t 16 74 205 157 142 s 17 62 144 84 288 t 18 136 71 183 188 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=IDD2.ampDAP:M0320:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g66730.DAP/M0321/AthalianaCistrome XX ID At5g66730.DAP:M0321:AthalianaCistrome XX NA At5g66730.DAP XX DE At5g66730.DAP XX OS Arabidopsis thaliana XX BF 12368; XX P0 A C G T 01 188 186 62 150 h 02 351 57 121 57 a 03 133 165 209 79 s 04 405 10 43 128 A 05 502 0 0 84 A 06 403 25 75 83 A 07 541 23 17 5 A 08 163 348 59 16 m 09 4 0 582 0 G 10 586 0 0 0 A 11 0 586 0 0 C 12 578 0 8 0 A 13 581 0 5 0 A 14 559 8 17 2 A 15 471 32 23 60 A 16 306 86 68 126 a 17 280 71 59 176 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g66730.DAP:M0321:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g14580.ampDAP/M0322/AthalianaCistrome XX ID At1g14580.ampDAP:M0322:AthalianaCistrome XX NA At1g14580.ampDAP XX DE At1g14580.ampDAP XX OS Arabidopsis thaliana XX BF 12330; XX P0 A C G T 01 178 255 41 110 m 02 383 10 180 11 r 03 59 248 238 39 s 04 421 0 11 152 W 05 466 0 0 118 A 06 414 41 119 10 A 07 505 55 20 4 A 08 173 315 61 35 m 09 8 0 563 13 G 10 544 40 0 0 A 11 0 584 0 0 C 12 581 0 3 0 A 13 566 13 4 1 A 14 522 14 37 11 A 15 412 32 49 91 A 16 262 91 85 146 w 17 250 77 77 180 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g14580.ampDAP:M0322:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC JGL.DAP/M0323/AthalianaCistrome XX ID JGL.DAP:M0323:AthalianaCistrome XX NA JGL.DAP XX DE JGL.DAP XX OS Arabidopsis thaliana XX BF 17710; XX P0 A C G T 01 512 15 49 24 A 02 249 256 65 30 m 03 22 275 4 299 y 04 124 24 114 338 t 05 69 160 142 229 y 06 8 489 52 51 C 07 578 4 18 0 A 08 0 7 593 0 G 09 4 0 0 596 T 10 2 28 16 554 T 11 238 188 47 127 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=JGL.DAP:M0323:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AZF1.ampDAP/M0324/AthalianaCistrome XX ID AZF1.ampDAP:M0324:AthalianaCistrome XX NA AZF1.ampDAP XX DE AZF1.ampDAP XX OS Arabidopsis thaliana XX BF 10735; XX P0 A C G T 01 250 36 141 169 w 02 88 94 269 145 g 03 209 13 78 296 w 04 85 20 419 72 G 05 246 39 50 261 w 06 62 161 225 148 s 07 595 0 1 0 A 08 0 71 525 0 G 09 0 0 0 596 T 10 7 0 589 0 G 11 279 0 65 252 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AZF1.ampDAP:M0324:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtIDD11.DAP/M0325/AthalianaCistrome XX ID AtIDD11.DAP:M0325:AthalianaCistrome XX NA AtIDD11.DAP XX DE AtIDD11.DAP XX OS Arabidopsis thaliana XX BF 17750; XX P0 A C G T 01 132 104 90 248 t 02 135 108 70 261 t 03 139 129 67 239 t 04 117 114 100 243 t 05 123 113 71 267 t 06 158 77 90 249 w 07 131 83 81 279 t 08 85 94 42 353 t 09 16 76 28 454 T 10 0 14 9 551 T 11 0 6 0 568 T 12 1 0 573 0 G 13 0 0 1 573 T 14 4 536 0 34 C 15 24 60 185 305 k 16 31 60 46 437 T 17 84 104 50 336 t 18 105 22 26 421 T 19 109 77 29 359 t 20 96 197 125 156 y 21 79 127 70 298 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtIDD11.DAP:M0325:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC STOP1.ampDAP/M0326/AthalianaCistrome XX ID STOP1.ampDAP:M0326:AthalianaCistrome XX NA STOP1.ampDAP XX DE STOP1.ampDAP XX OS Arabidopsis thaliana XX BF 12517; XX P0 A C G T 01 374 47 110 48 a 02 72 458 29 20 C 03 0 535 1 43 C 04 33 41 80 425 T 05 100 144 131 204 t 06 70 440 26 43 C 07 260 282 6 31 m 08 1 473 0 105 C 09 43 405 21 110 C 10 395 4 155 25 R 11 90 33 407 49 G 12 308 32 71 168 w 13 125 34 10 410 T 14 314 79 157 29 r 15 221 141 73 144 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=STOP1.ampDAP:M0326:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TF3A.DAP/M0328/AthalianaCistrome XX ID TF3A.DAP:M0328:AthalianaCistrome XX NA TF3A.DAP XX DE TF3A.DAP XX OS Arabidopsis thaliana XX BF 12523; XX P0 A C G T 01 27 471 8 94 C 02 51 340 25 184 y 03 43 77 47 433 T 04 25 479 5 91 C 05 103 353 17 127 c 06 53 65 17 465 T 07 11 494 9 86 C 08 92 403 5 100 c 09 64 39 32 465 T 10 32 495 11 62 C 11 96 378 19 107 c 12 73 28 9 490 T 13 26 531 3 40 C 14 78 418 9 95 C 15 50 32 40 478 T 16 25 496 8 71 C 17 83 420 15 82 C 18 107 29 34 430 T 19 24 515 12 49 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TF3A.DAP:M0328:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NUC.ampDAP/M0330/AthalianaCistrome XX ID NUC.ampDAP:M0330:AthalianaCistrome XX NA NUC.ampDAP XX DE NUC.ampDAP XX OS Arabidopsis thaliana XX BF 12497; XX P0 A C G T 01 93 49 44 159 w 02 79 36 48 182 t 03 47 21 23 254 T 04 5 16 8 316 T 05 0 0 11 334 T 06 0 0 0 345 T 07 0 0 345 0 G 08 0 0 0 345 T 09 0 344 0 1 C 10 8 16 272 49 G 11 0 7 19 319 T 12 15 72 23 235 T 13 38 0 0 307 T 14 102 21 5 217 w 15 44 116 124 61 s 16 11 87 19 228 y 17 75 21 149 100 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NUC.ampDAP:M0330:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g22890.DAP/M0331/AthalianaCistrome XX ID At5g22890.DAP:M0331:AthalianaCistrome XX NA At5g22890.DAP XX DE At5g22890.DAP XX OS Arabidopsis thaliana XX BF 17760; XX P0 A C G T 01 12 153 7 56 c 02 197 10 15 6 A 03 33 2 184 9 G 04 174 0 24 30 A 05 3 2 4 219 T 06 204 3 21 0 A 07 118 42 20 48 a 08 82 99 21 26 m 09 194 8 18 8 A 10 25 194 0 9 C 11 2 222 0 4 C 12 0 6 2 220 T 13 60 51 81 36 r 14 55 109 25 39 c 15 87 79 30 32 m 16 51 93 15 69 y 17 77 54 33 64 w 18 91 16 45 76 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g22890.DAP:M0331:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g41835.DAP/M0332/AthalianaCistrome XX ID At2g41835.DAP:M0332:AthalianaCistrome XX NA At2g41835.DAP XX DE At2g41835.DAP XX OS Arabidopsis thaliana XX BF 12345; XX P0 A C G T 01 0 0 0 192 T 02 0 0 0 192 T 03 0 0 192 0 G 04 192 0 0 0 A 05 180 0 12 0 A 06 192 0 0 0 A 07 192 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g41835.DAP:M0332:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G49930.DAP/M0336/AthalianaCistrome XX ID AT3G49930.DAP:M0336:AthalianaCistrome XX NA AT3G49930.DAP XX DE AT3G49930.DAP XX OS Arabidopsis thaliana XX BF 12293; XX P0 A C G T 01 0 0 102 0 G 02 102 0 0 0 A 03 102 0 0 0 A 04 102 0 0 0 A 05 0 0 6 96 T 06 0 102 0 0 C 07 30 14 12 46 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G49930.DAP:M0336:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC STOP1.DAP/M0338/AthalianaCistrome XX ID STOP1.DAP:M0338:AthalianaCistrome XX NA STOP1.DAP XX DE STOP1.DAP XX OS Arabidopsis thaliana XX BF 12517; XX P0 A C G T 01 6 49 2 2 C 02 0 58 0 1 C 03 0 7 7 45 T 04 6 13 14 26 t 05 3 46 4 6 C 06 24 34 0 1 m 07 0 46 0 13 C 08 1 48 1 9 C 09 46 2 10 1 A 10 7 2 45 5 G 11 30 5 10 14 a 12 9 2 0 48 T 13 31 7 20 1 r 14 22 18 7 12 m 15 34 10 4 11 a 16 33 19 7 0 m 17 7 50 0 2 C 18 1 41 0 17 Y 19 5 14 8 32 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=STOP1.DAP:M0338:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g48100.DAP/M0339/AthalianaCistrome XX ID At2g48100.DAP:M0339:AthalianaCistrome XX NA At2g48100.DAP XX DE At2g48100.DAP XX OS Arabidopsis thaliana XX BF 12348; XX P0 A C G T 01 4 0 0 34 T 02 0 38 0 0 C 03 38 0 0 0 A 04 0 38 0 0 C 05 0 38 0 0 C 06 38 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g48100.DAP:M0339:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G63260.DAP/M0340/AthalianaCistrome XX ID AT5G63260.DAP:M0340:AthalianaCistrome XX NA AT5G63260.DAP XX DE AT5G63260.DAP XX OS Arabidopsis thaliana XX BF 17768; XX P0 A C G T 01 109 163 197 131 s 02 453 28 70 49 A 03 433 0 0 167 W 04 600 0 0 0 A 05 600 0 0 0 A 06 599 0 1 0 A 07 0 0 600 0 G 08 0 25 164 411 K 09 191 41 154 214 d 10 380 6 176 38 r 11 300 138 38 124 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G63260.DAP:M0340:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G12130.ampDAP/M0341/AthalianaCistrome XX ID AT3G12130.ampDAP:M0341:AthalianaCistrome XX NA AT3G12130.ampDAP XX DE AT3G12130.ampDAP XX OS Arabidopsis thaliana XX BF 17740; XX P0 A C G T 01 288 76 133 103 a 02 252 104 112 132 a 03 223 82 138 157 w 04 101 217 184 98 s 05 430 59 71 40 A 06 457 13 0 130 A 07 600 0 0 0 A 08 600 0 0 0 A 09 591 0 9 0 A 10 0 0 600 0 G 11 59 78 208 255 k 12 164 63 103 270 w 13 351 9 179 61 r 14 286 104 89 121 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G12130.ampDAP:M0341:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDM1.ampDAP/M0342/AthalianaCistrome XX ID CDM1.ampDAP:M0342:AthalianaCistrome XX NA CDM1.ampDAP XX DE CDM1.ampDAP XX OS Arabidopsis thaliana XX BF 17713; XX P0 A C G T 01 15 455 125 4 C 02 1 598 0 0 C 03 1 0 564 34 G 04 524 5 45 25 A 05 322 64 96 117 a 06 521 8 27 43 A 07 556 1 11 31 A 08 350 22 31 196 w 09 240 97 100 162 w 10 53 103 30 413 T 11 53 546 0 0 C 12 0 0 599 0 G 13 2 92 497 8 G 14 318 50 120 111 a 15 212 74 177 136 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDM1.ampDAP:M0342:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G63260.ampDAP/M0343/AthalianaCistrome XX ID AT5G63260.ampDAP:M0343:AthalianaCistrome XX NA AT5G63260.ampDAP XX DE AT5G63260.ampDAP XX OS Arabidopsis thaliana XX BF 17768; XX P0 A C G T 01 101 199 173 127 s 02 547 0 29 24 A 03 502 1 0 97 A 04 594 6 0 0 A 05 600 0 0 0 A 06 591 0 9 0 A 07 0 0 600 0 G 08 5 45 135 415 T 09 205 31 165 199 d 10 407 29 93 71 a 11 314 130 41 115 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G63260.ampDAP:M0343:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g08750.DAP/M0344/AthalianaCistrome XX ID At5g08750.DAP:M0344:AthalianaCistrome XX NA At5g08750.DAP XX DE At5g08750.DAP XX OS Arabidopsis thaliana XX BF 17767; XX P0 A C G T 01 251 82 157 110 r 02 166 230 61 143 m 03 164 250 69 117 m 04 194 47 147 212 w 05 78 263 19 240 y 06 318 198 71 13 m 07 179 0 420 1 R 08 4 493 0 103 C 09 2 598 0 0 C 10 19 0 581 0 G 11 42 380 2 176 y 12 553 8 26 13 A 13 358 53 82 107 a 14 325 131 45 99 a 15 311 108 76 105 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g08750.DAP:M0344:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EMB1789.DAP/M0345/AthalianaCistrome XX ID EMB1789.DAP:M0345:AthalianaCistrome XX NA EMB1789.DAP XX DE EMB1789.DAP XX OS Arabidopsis thaliana XX BF 12396; XX P0 A C G T 01 78 23 19 148 w 02 73 38 20 137 w 03 74 67 20 107 h 04 90 41 25 112 w 05 60 36 57 115 t 06 19 9 21 219 T 07 39 0 1 227 T 08 0 15 0 253 T 09 0 0 3 265 T 10 48 11 0 209 T 11 251 0 5 12 A 12 0 264 0 4 C 13 13 150 19 86 y 14 40 26 119 83 k 15 34 75 15 144 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EMB1789.DAP:M0345:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TZF9.DAP/M0346/AthalianaCistrome XX ID TZF9.DAP:M0346:AthalianaCistrome XX NA TZF9.DAP XX DE TZF9.DAP XX OS Arabidopsis thaliana XX BF 12530; XX P0 A C G T 01 0 0 0 127 T 02 0 127 0 0 C 03 127 0 0 0 A 04 127 0 0 0 A 05 0 127 0 0 C 06 127 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TZF9.DAP:M0346:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC U2AF35B.DAP/M0347/AthalianaCistrome XX ID U2AF35B.DAP:M0347:AthalianaCistrome XX NA U2AF35B.DAP XX DE U2AF35B.DAP XX OS Arabidopsis thaliana XX BF 12531; XX P0 A C G T 01 15 14 14 42 t 02 0 0 0 85 T 03 0 0 85 0 G 04 0 0 0 85 T 05 0 0 0 85 T 06 0 0 85 0 G 07 85 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=U2AF35B.DAP:M0347:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g74370.DAP/M0348/AthalianaCistrome XX ID At1g74370.DAP:M0348:AthalianaCistrome XX NA At1g74370.DAP XX DE At1g74370.DAP XX OS Arabidopsis thaliana XX BF 12337; XX P0 A C G T 01 25 4 35 5 r 02 36 3 9 21 w 03 18 6 8 37 w 04 40 6 11 12 a 05 21 4 30 14 r 06 23 2 20 24 d 07 20 16 21 12 r 08 24 2 9 34 w 09 29 3 4 33 w 10 33 6 10 20 w 11 28 9 7 25 w 12 20 0 48 1 R 13 1 0 68 0 G 14 63 1 0 5 A 15 0 0 5 64 T 16 61 0 0 8 A 17 62 7 0 0 A 18 11 5 43 10 g 19 38 8 22 1 r 20 29 8 1 31 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g74370.DAP:M0348:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g70910.DAP/M0349/AthalianaCistrome XX ID At1g70910.DAP:M0349:AthalianaCistrome XX NA At1g70910.DAP XX DE At1g70910.DAP XX OS Arabidopsis thaliana XX BF 12335; XX P0 A C G T 01 19 16 3 12 m 02 0 0 0 50 T 03 0 50 0 0 C 04 50 0 0 0 A 05 0 50 0 0 C 06 0 50 0 0 C 07 50 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g70910.DAP:M0349:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CAMTA5.DAP/M0351/AthalianaCistrome XX ID CAMTA5.DAP:M0351:AthalianaCistrome XX NA CAMTA5.DAP XX DE CAMTA5.DAP XX OS Arabidopsis thaliana XX BF 12381; XX P0 A C G T 01 177 187 136 100 m 02 84 357 84 75 c 03 66 57 425 52 G 04 53 228 52 267 y 05 73 12 439 76 G 06 39 19 103 439 T 07 184 109 164 143 r 08 205 81 128 186 w 09 238 57 173 132 r 10 296 85 72 147 a 11 258 89 109 144 a 12 229 183 156 32 v 13 26 558 6 10 C 14 6 0 594 0 G 15 22 300 0 278 y 16 6 0 578 16 G 17 6 12 50 532 T 18 126 92 191 191 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CAMTA5.DAP:M0351:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAP3.DAP/M0352/AthalianaCistrome XX ID HAP3.DAP:M0352:AthalianaCistrome XX NA HAP3.DAP XX DE HAP3.DAP XX OS Arabidopsis thaliana XX BF 17735; XX P0 A C G T 01 0 0 0 145 T 02 0 145 0 0 C 03 0 145 0 0 C 04 145 0 0 0 A 05 0 0 0 145 T 06 0 145 0 0 C 07 145 0 0 0 A 08 38 21 28 58 w 09 26 67 26 26 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAP3.DAP:M0352:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NFYB4.DAP/M0353/AthalianaCistrome XX ID NFYB4.DAP:M0353:AthalianaCistrome XX NA NFYB4.DAP XX DE NFYB4.DAP XX OS Arabidopsis thaliana XX BF 12491; XX P0 A C G T 01 0 0 0 95 T 02 0 0 95 0 G 03 95 0 0 0 A 04 95 0 0 0 A 05 95 0 0 0 A 06 95 0 0 0 A 07 22 30 24 19 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NFYB4.DAP:M0353:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G20110.ampDAP/M0354/AthalianaCistrome XX ID AT2G20110.ampDAP:M0354:AthalianaCistrome XX NA AT2G20110.ampDAP XX DE AT2G20110.ampDAP XX OS Arabidopsis thaliana XX BF 10944; XX P0 A C G T 01 265 81 116 138 a 02 324 9 98 169 w 03 0 0 0 600 T 04 0 0 0 600 T 05 0 121 0 479 T 06 282 0 318 0 r 07 599 0 0 1 A 08 598 1 1 0 A 09 110 24 0 466 T 10 92 18 6 484 T 11 6 79 16 499 T 12 144 82 156 218 k 13 307 46 110 137 a 14 375 0 81 144 a 15 305 38 32 225 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G20110.ampDAP:M0354:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCX2.ampDAP/M0355/AthalianaCistrome XX ID TCX2.ampDAP:M0355:AthalianaCistrome XX NA TCX2.ampDAP XX DE TCX2.ampDAP XX OS Arabidopsis thaliana XX BF 12522; XX P0 A C G T 01 118 41 21 420 T 02 67 43 3 487 T 03 73 165 43 319 y 04 297 121 116 66 a 05 534 9 41 16 A 06 562 13 8 17 A 07 476 0 28 96 A 08 7 0 4 589 T 09 0 0 0 600 T 10 0 287 0 313 y 11 413 0 187 0 R 12 600 0 0 0 A 13 600 0 0 0 A 14 176 79 3 342 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCX2.ampDAP:M0355:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SOL1.ampDAP/M0356/AthalianaCistrome XX ID SOL1.ampDAP:M0356:AthalianaCistrome XX NA SOL1.ampDAP XX DE SOL1.ampDAP XX OS Arabidopsis thaliana XX BF 10946; XX P0 A C G T 01 311 57 116 116 a 02 349 1 60 190 w 03 0 0 0 600 T 04 0 0 0 600 T 05 0 271 2 327 y 06 390 0 210 0 r 07 600 0 0 0 A 08 598 0 1 1 A 09 140 20 0 440 T 10 33 27 10 530 T 11 20 75 13 492 T 12 75 179 154 192 b 13 414 44 70 72 A 14 481 6 20 93 A 15 388 23 53 136 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SOL1.ampDAP:M0356:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G51470.DAP/M0361/AthalianaCistrome XX ID AT3G51470.DAP:M0361:AthalianaCistrome XX NA AT3G51470.DAP XX DE AT3G51470.DAP XX OS Arabidopsis thaliana XX BF 12294; XX P0 A C G T 01 67 56 31 215 t 02 173 72 13 111 w 03 105 157 30 77 m 04 21 108 186 54 s 05 48 42 279 0 G 06 0 0 0 369 T 07 159 7 203 0 r 08 8 263 94 4 S 09 327 0 5 37 A 10 0 366 3 0 C 11 28 288 7 46 C 12 146 63 54 106 w 13 45 112 107 105 b 14 98 221 31 19 m 15 180 55 63 71 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G51470.DAP:M0361:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2FA.ampDAP/M0362/AthalianaCistrome XX ID E2FA.ampDAP:M0362:AthalianaCistrome XX NA E2FA.ampDAP XX DE E2FA.ampDAP XX OS Arabidopsis thaliana XX BF 17730; XX P0 A C G T 01 126 89 31 346 t 02 104 55 32 401 t 03 112 16 77 387 t 04 13 0 9 570 T 05 3 0 589 0 G 06 0 0 592 0 G 07 0 592 0 0 C 08 0 0 592 0 G 09 0 534 58 0 C 10 0 426 127 39 C 11 325 98 19 150 w 12 232 79 33 248 w 13 223 83 50 236 w 14 214 82 66 230 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2FA.ampDAP:M0362:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEL2.DAP/M0363/AthalianaCistrome XX ID DEL2.DAP:M0363:AthalianaCistrome XX NA DEL2.DAP XX DE DEL2.DAP XX OS Arabidopsis thaliana XX BF 3888; XX P0 A C G T 01 192 25 111 248 w 02 234 25 56 261 w 03 317 23 65 171 w 04 185 138 49 204 w 05 180 29 166 201 d 06 131 18 103 324 t 07 61 11 21 483 T 08 38 3 4 531 T 09 28 4 12 532 T 10 21 0 12 543 T 11 7 7 550 12 G 12 2 0 574 0 G 13 15 550 0 11 C 14 5 0 571 0 G 15 0 8 566 2 G 16 33 6 532 5 G 17 570 0 6 0 A 18 565 2 7 2 A 19 527 15 12 22 A 20 399 41 18 118 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEL2.DAP:M0363:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2FA.DAP/M0364/AthalianaCistrome XX ID E2FA.DAP:M0364:AthalianaCistrome XX NA E2FA.DAP XX DE E2FA.DAP XX OS Arabidopsis thaliana XX BF 17730; XX P0 A C G T 01 219 74 81 206 w 02 207 50 88 235 w 03 221 46 89 224 w 04 168 23 100 289 w 05 63 111 406 0 G 06 0 40 540 0 G 07 0 580 0 0 C 08 0 0 580 0 G 09 0 580 0 0 C 10 0 577 1 2 C 11 560 4 1 15 A 12 347 87 18 128 a 13 354 45 65 116 a 14 321 38 80 141 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2FA.DAP:M0364:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEL1.ampDAP/M0365/AthalianaCistrome XX ID DEL1.ampDAP:M0365:AthalianaCistrome XX NA DEL1.ampDAP XX DE DEL1.ampDAP XX OS Arabidopsis thaliana XX BF 7504; XX P0 A C G T 01 136 6 125 317 t 02 64 2 12 506 T 03 16 0 0 568 T 04 9 0 1 574 T 05 10 1 3 570 T 06 5 4 571 4 G 07 2 0 582 0 G 08 1 583 0 0 C 09 0 0 583 1 G 10 0 11 572 1 G 11 10 3 569 2 G 12 581 0 3 0 A 13 584 0 0 0 A 14 541 5 9 29 A 15 419 33 16 116 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEL1.ampDAP:M0365:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEL2.ampDAP/M0366/AthalianaCistrome XX ID DEL2.ampDAP:M0366:AthalianaCistrome XX NA DEL2.ampDAP XX DE DEL2.ampDAP XX OS Arabidopsis thaliana XX BF 3888; XX P0 A C G T 01 114 5 135 295 t 02 57 1 7 484 T 03 26 2 1 520 T 04 20 0 4 525 T 05 8 1 3 537 T 06 3 2 543 1 G 07 0 0 549 0 G 08 1 548 0 0 C 09 1 0 547 1 G 10 1 8 540 0 G 11 0 6 542 1 G 12 545 0 4 0 A 13 549 0 0 0 A 14 526 7 6 10 A 15 425 28 12 84 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEL2.ampDAP:M0366:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEL1.DAP/M0367/AthalianaCistrome XX ID DEL1.DAP:M0367:AthalianaCistrome XX NA DEL1.DAP XX DE DEL1.DAP XX OS Arabidopsis thaliana XX BF 7504; XX P0 A C G T 01 138 72 46 70 a 02 150 102 21 53 m 03 132 78 17 99 w 04 143 59 65 59 a 05 144 43 29 110 w 06 155 57 44 70 a 07 182 21 36 87 w 08 86 15 22 203 w 09 24 13 10 279 T 10 1 0 1 324 T 11 1 0 0 325 T 12 0 323 3 0 C 13 0 323 3 0 C 14 0 326 0 0 C 15 0 0 326 0 G 16 1 324 1 0 C 17 1 308 16 1 C 18 303 11 0 12 A 19 294 3 4 25 A 20 279 1 2 44 A 21 246 5 0 75 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEL1.DAP:M0367:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2FC.DAP/M0368/AthalianaCistrome XX ID E2FC.DAP:M0368:AthalianaCistrome XX NA E2FC.DAP XX DE E2FC.DAP XX OS Arabidopsis thaliana XX BF 7503; XX P0 A C G T 01 21 2 0 0 A 02 8 0 3 12 w 03 9 0 5 9 w 04 8 0 5 10 w 05 6 0 5 12 w 06 4 1 18 0 G 07 0 1 18 4 G 08 5 18 0 0 C 09 0 0 23 0 G 10 0 23 0 0 C 11 0 23 0 0 C 12 21 2 0 0 A 13 19 2 0 2 A 14 21 0 2 0 A 15 16 0 6 1 R XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2FC.DAP:M0368:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EIN3.DAP/M0369/AthalianaCistrome XX ID EIN3.DAP:M0369:AthalianaCistrome XX NA EIN3.DAP XX DE EIN3.DAP XX OS Arabidopsis thaliana XX BF 11028; XX P0 A C G T 01 91 29 418 62 G 02 145 48 124 283 t 03 114 363 40 83 c 04 57 225 10 308 y 05 461 46 31 62 A 06 161 111 247 81 r 07 382 5 211 2 r 08 7 1 9 583 T 09 168 24 57 351 w 10 27 564 5 4 C 11 498 9 60 33 A 12 249 40 66 245 w 13 78 43 35 444 T 14 5 49 508 38 G 15 285 99 28 188 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EIN3.DAP:M0369:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EIL3.DAP/M0370/AthalianaCistrome XX ID EIL3.DAP:M0370:AthalianaCistrome XX NA EIL3.DAP XX DE EIL3.DAP XX OS Arabidopsis thaliana XX BF 11026; XX P0 A C G T 01 25 20 30 19 r 02 9 32 3 50 y 03 3 0 90 1 G 04 7 0 13 74 T 05 1 86 7 0 C 06 4 39 0 51 y 07 79 5 0 10 A 08 6 7 76 5 G 09 43 0 46 5 r 10 0 0 0 94 T 11 20 4 8 62 t 12 0 94 0 0 C 13 80 3 2 9 A 14 26 10 9 49 w 15 24 10 16 44 w 16 27 12 34 21 r 17 37 10 10 37 w 18 42 21 11 20 a 19 23 13 20 38 t 20 26 34 9 25 h 21 17 16 9 52 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EIL3.DAP:M0370:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FAR1.ampDAP/M0372/AthalianaCistrome XX ID FAR1.ampDAP:M0372:AthalianaCistrome XX NA FAR1.ampDAP XX DE FAR1.ampDAP XX OS Arabidopsis thaliana XX BF 12403; XX P0 A C G T 01 95 63 12 45 m 02 60 15 130 10 r 03 0 0 215 0 G 04 0 215 0 0 C 05 0 0 214 1 G 06 0 215 0 0 C 07 0 0 215 0 G 08 0 0 0 215 T 09 6 5 202 2 G 10 94 4 78 39 r 11 92 17 79 27 r 12 69 38 66 42 r 13 50 38 42 85 t 14 67 52 24 72 w 15 58 78 40 39 m 16 128 35 23 29 a 17 50 100 47 18 c 18 29 51 76 59 k 19 27 92 67 29 s 20 36 59 83 37 s 21 37 85 55 38 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FAR1.ampDAP:M0372:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FHA2.DAP/M0373/AthalianaCistrome XX ID FHA2.DAP:M0373:AthalianaCistrome XX NA FHA2.DAP XX DE FHA2.DAP XX OS Arabidopsis thaliana XX BF 12405; XX P0 A C G T 01 11 0 1 39 T 02 28 1 19 3 r 03 20 8 10 13 w 04 0 49 0 2 C 05 0 0 26 25 k 06 0 0 0 51 T 07 4 13 34 0 s 08 0 4 1 46 T 09 10 10 10 21 t 10 10 23 11 7 c 11 11 12 8 20 t 12 31 0 17 3 r 13 0 29 3 19 y 14 51 0 0 0 A 15 11 40 0 0 C 16 0 1 50 0 G 17 7 34 1 9 c 18 5 1 3 42 T 19 30 0 0 21 w 20 14 26 1 10 m 21 5 22 5 19 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FHA2.DAP:M0373:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G45580.ampDAP/M0375/AthalianaCistrome XX ID AT5G45580.ampDAP:M0375:AthalianaCistrome XX NA AT5G45580.ampDAP XX DE AT5G45580.ampDAP XX OS Arabidopsis thaliana XX BF 17761; XX P0 A C G T 01 259 85 121 135 a 02 264 97 112 127 a 03 347 27 126 100 a 04 251 75 141 133 a 05 178 93 329 0 r 06 0 0 600 0 G 07 586 14 0 0 A 08 599 1 0 0 A 09 0 0 0 600 T 10 242 356 0 2 m 11 29 0 1 570 T 12 63 18 3 516 T 13 61 291 44 204 y 14 85 173 97 245 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G45580.ampDAP:M0375:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g24120.ampDAP/M0376/AthalianaCistrome XX ID At3g24120.ampDAP:M0376:AthalianaCistrome XX NA At3g24120.ampDAP XX DE At3g24120.ampDAP XX OS Arabidopsis thaliana XX BF 11456; XX P0 A C G T 01 219 114 153 110 r 02 312 60 144 80 a 03 147 21 367 61 g 04 456 52 13 75 A 05 584 0 0 12 A 06 0 0 196 400 k 07 596 0 0 0 A 08 0 0 0 596 T 09 0 0 10 586 T 10 0 596 0 0 C 11 0 258 165 173 b 12 181 120 68 227 w 13 207 106 29 254 w 14 127 78 103 288 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g24120.ampDAP:M0376:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G40260.ampDAP/M0379/AthalianaCistrome XX ID AT2G40260.ampDAP:M0379:AthalianaCistrome XX NA AT2G40260.ampDAP XX DE AT2G40260.ampDAP XX OS Arabidopsis thaliana XX BF 12284; XX P0 A C G T 01 263 79 88 169 w 02 235 79 146 139 a 03 256 63 166 114 r 04 250 72 131 146 a 05 239 77 54 229 w 06 214 115 55 215 w 07 160 113 44 282 w 08 200 122 85 192 w 09 256 73 94 176 w 10 238 67 123 171 w 11 394 53 24 128 a 12 502 0 0 97 A 13 100 303 33 163 y 14 598 0 0 1 A 15 0 0 0 599 T 16 1 0 0 598 T 17 0 599 0 0 C 18 2 230 11 356 y 19 112 150 45 292 y 20 76 87 21 415 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G40260.ampDAP:M0379:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G49560.ampDAP/M0382/AthalianaCistrome XX ID AT1G49560.ampDAP:M0382:AthalianaCistrome XX NA AT1G49560.ampDAP XX DE AT1G49560.ampDAP XX OS Arabidopsis thaliana XX BF 12268; XX P0 A C G T 01 231 91 168 110 r 02 99 52 421 28 G 03 273 59 124 144 a 04 474 21 28 77 A 05 46 81 13 460 T 06 62 428 25 85 C 07 219 150 102 129 m 08 320 65 114 101 a 09 486 3 34 77 A 10 1 0 570 29 G 11 599 0 0 1 A 12 6 0 0 594 T 13 41 43 6 510 T 14 1 599 0 0 C 15 106 194 61 239 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G49560.ampDAP:M0382:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g12730.ampDAP/M0384/AthalianaCistrome XX ID At3g12730.ampDAP:M0384:AthalianaCistrome XX NA At3g12730.ampDAP XX DE At3g12730.ampDAP XX OS Arabidopsis thaliana XX BF 12351; XX P0 A C G T 01 290 76 106 124 a 02 331 27 95 143 a 03 264 63 126 143 a 04 223 107 266 0 r 05 0 0 596 0 G 06 577 16 0 3 A 07 596 0 0 0 A 08 0 0 0 596 T 09 318 278 0 0 m 10 10 0 0 586 T 11 69 14 42 471 T 12 82 291 32 191 y 13 76 104 112 304 t 14 127 120 128 221 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g12730.ampDAP:M0384:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g01060.ampDAP/M0385/AthalianaCistrome XX ID At2g01060.ampDAP:M0385:AthalianaCistrome XX NA At2g01060.ampDAP XX DE At2g01060.ampDAP XX OS Arabidopsis thaliana XX BF 12341; XX P0 A C G T 01 226 101 135 134 a 02 218 124 93 161 w 03 275 98 80 143 a 04 271 57 108 160 w 05 220 96 107 173 w 06 261 144 190 1 r 07 0 0 595 1 G 08 497 66 5 28 A 09 591 0 0 5 A 10 0 0 0 596 T 11 346 250 0 0 m 12 12 0 0 584 T 13 112 75 81 328 t 14 79 320 52 145 c 15 139 164 74 219 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g01060.ampDAP:M0385:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G20400.ampDAP/M0389/AthalianaCistrome XX ID AT2G20400.ampDAP:M0389:AthalianaCistrome XX NA AT2G20400.ampDAP XX DE AT2G20400.ampDAP XX OS Arabidopsis thaliana XX BF 12278; XX P0 A C G T 01 354 52 121 51 a 02 316 38 136 88 a 03 288 41 227 22 r 04 0 0 571 7 G 05 465 56 8 49 A 06 578 0 0 0 A 07 0 0 12 566 T 08 578 0 0 0 A 09 0 0 0 578 T 10 35 33 35 475 T 11 0 578 0 0 C 12 12 210 187 169 b 13 197 107 147 127 r 14 271 46 63 198 w 15 147 64 109 258 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G20400.ampDAP:M0389:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g04030.ampDAP/M0390/AthalianaCistrome XX ID At3g04030.ampDAP:M0390:AthalianaCistrome XX NA At3g04030.ampDAP XX DE At3g04030.ampDAP XX OS Arabidopsis thaliana XX BF 11454; XX P0 A C G T 01 272 101 158 63 r 02 190 19 335 50 r 03 519 19 4 52 A 04 593 0 0 1 A 05 0 0 242 352 k 06 594 0 0 0 A 07 0 0 0 594 T 08 0 0 6 588 T 09 0 594 0 0 C 10 0 269 109 216 y 11 140 154 68 232 y 12 144 92 16 342 t 13 121 94 78 301 t 14 126 107 92 269 t 15 135 121 88 250 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g04030.ampDAP:M0390:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G37180.ampDAP/M0391/AthalianaCistrome XX ID AT4G37180.ampDAP:M0391:AthalianaCistrome XX NA AT4G37180.ampDAP XX DE AT4G37180.ampDAP XX OS Arabidopsis thaliana XX BF 12304; XX P0 A C G T 01 207 176 75 140 m 02 247 93 93 165 w 03 238 68 200 92 r 04 495 37 23 43 A 05 597 0 1 0 A 06 0 0 500 98 G 07 598 0 0 0 A 08 1 0 0 597 T 09 14 3 4 577 T 10 0 598 0 0 C 11 72 257 73 196 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G37180.ampDAP:M0391:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g25550.ampDAP/M0394/AthalianaCistrome XX ID At1g25550.ampDAP:M0394:AthalianaCistrome XX NA At1g25550.ampDAP XX DE At1g25550.ampDAP XX OS Arabidopsis thaliana XX BF 11450; XX P0 A C G T 01 153 120 165 160 d 02 239 95 85 179 w 03 281 63 90 164 w 04 161 129 50 258 w 05 189 175 91 143 m 06 123 82 309 84 g 07 459 29 45 65 A 08 589 0 4 5 A 09 0 0 365 233 k 10 598 0 0 0 A 11 0 0 0 598 T 12 14 9 1 574 T 13 0 598 0 0 C 14 32 277 37 252 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g25550.ampDAP:M0394:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN2.ampDAP/M0396/AthalianaCistrome XX ID KAN2.ampDAP:M0396:AthalianaCistrome XX NA KAN2.ampDAP XX DE KAN2.ampDAP XX OS Arabidopsis thaliana XX BF 12436; XX P0 A C G T 01 297 63 98 99 a 02 311 18 177 51 r 03 346 2 209 0 r 04 0 0 557 0 G 05 556 0 0 1 A 06 557 0 0 0 A 07 0 1 0 556 T 08 542 0 15 0 A 09 145 0 0 412 W 10 111 19 68 359 t 11 102 285 90 80 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN2.ampDAP:M0396:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G38300.DAP/M0397/AthalianaCistrome XX ID AT2G38300.DAP:M0397:AthalianaCistrome XX NA AT2G38300.DAP XX DE AT2G38300.DAP XX OS Arabidopsis thaliana XX BF 12283; XX P0 A C G T 01 318 64 80 138 a 02 416 9 86 89 A 03 263 33 171 133 r 04 395 5 200 0 r 05 0 0 600 0 G 06 600 0 0 0 A 07 599 1 0 0 A 08 1 2 0 597 T 09 164 38 227 171 d 10 83 5 12 500 T 11 141 15 56 388 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G38300.DAP:M0397:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g13040.DAP/M0399/AthalianaCistrome XX ID At3g13040.DAP:M0399:AthalianaCistrome XX NA At3g13040.DAP XX DE At3g13040.DAP XX OS Arabidopsis thaliana XX BF 11455; XX P0 A C G T 01 76 20 24 37 a 02 72 10 25 50 w 03 0 0 157 0 G 04 154 0 3 0 A 05 157 0 0 0 A 06 150 0 7 0 A 07 157 0 0 0 A 08 0 157 0 0 C 09 88 23 13 33 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g13040.DAP:M0399:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g03500.ampDAP/M0400/AthalianaCistrome XX ID At2g03500.ampDAP:M0400:AthalianaCistrome XX NA At2g03500.ampDAP XX DE At2g03500.ampDAP XX OS Arabidopsis thaliana XX BF 12342; XX P0 A C G T 01 1 1 96 0 G 02 69 0 11 18 A 03 89 0 9 0 A 04 0 0 0 98 T 05 2 89 0 7 C 06 14 1 0 83 T 07 16 7 13 62 t 08 27 5 39 27 d 09 0 0 98 0 G 10 98 0 0 0 A 11 0 0 6 92 T 12 11 7 3 77 T 13 0 98 0 0 C 14 3 48 11 36 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g03500.ampDAP:M0400:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G20400.DAP/M0402/AthalianaCistrome XX ID AT2G20400.DAP:M0402:AthalianaCistrome XX NA AT2G20400.DAP XX DE AT2G20400.DAP XX OS Arabidopsis thaliana XX BF 12278; XX P0 A C G T 01 18 35 14 1 m 02 0 0 68 0 G 03 56 4 5 3 A 04 68 0 0 0 A 05 0 0 0 68 T 06 66 0 2 0 A 07 1 0 0 67 T 08 9 1 22 36 k 09 12 56 0 0 C 10 0 46 3 19 y 11 22 9 3 34 w 12 0 11 3 54 T 13 19 8 17 24 d 14 28 9 10 21 w 15 9 9 21 29 k 16 16 17 17 18 b 17 24 10 8 26 w 18 16 24 8 20 y 19 29 13 5 21 w 20 6 17 14 31 y 21 15 21 20 12 s 22 18 11 16 23 w 23 21 8 28 11 r 24 18 13 9 28 w 25 27 19 6 16 m 26 18 9 12 29 w 27 22 13 18 15 r 28 29 11 3 25 w 29 9 14 9 36 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G20400.DAP:M0402:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G00250.DAP/M0403/AthalianaCistrome XX ID AT4G00250.DAP:M0403:AthalianaCistrome XX NA AT4G00250.DAP XX DE AT4G00250.DAP XX OS Arabidopsis thaliana XX BF 12299; XX P0 A C G T 01 291 76 61 164 w 02 327 31 85 149 w 03 52 320 48 172 y 04 113 368 62 49 c 05 5 33 0 554 T 06 8 5 14 565 T 07 592 0 0 0 A 08 0 0 0 592 T 09 0 592 0 0 C 10 0 544 0 48 C 11 432 1 119 40 A 12 164 126 31 271 w 13 244 18 12 318 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G00250.DAP:M0403:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G66420.DAP/M0404/AthalianaCistrome XX ID AT1G66420.DAP:M0404:AthalianaCistrome XX NA AT1G66420.DAP XX DE AT1G66420.DAP XX OS Arabidopsis thaliana XX BF 12269; XX P0 A C G T 01 39 2 4 8 A 02 30 4 11 8 a 03 10 35 3 5 c 04 17 28 8 0 m 05 0 1 0 52 T 06 6 10 0 37 T 07 52 0 0 1 A 08 0 0 0 53 T 09 0 52 0 1 C 10 1 52 0 0 C 11 41 0 7 5 A 12 7 7 2 37 T 13 28 2 0 23 w 14 18 1 3 31 w 15 15 23 4 11 m 16 4 12 6 31 t 17 11 3 9 30 t 18 24 9 13 7 a 19 11 5 18 19 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G66420.DAP:M0404:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtGRF6.DAP/M0405/AthalianaCistrome XX ID AtGRF6.DAP:M0405:AthalianaCistrome XX NA AtGRF6.DAP XX DE AtGRF6.DAP XX OS Arabidopsis thaliana XX BF 11810; XX P0 A C G T 01 139 154 163 140 s 02 176 111 134 175 w 03 216 78 159 143 r 04 235 92 138 131 a 05 228 117 94 157 w 06 150 117 74 255 w 07 106 75 251 164 k 08 3 111 0 482 T 09 2 1 593 0 G 10 2 0 2 592 T 11 1 595 0 0 C 12 595 0 0 1 A 13 0 0 595 1 G 14 479 1 48 68 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtGRF6.DAP:M0405:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GRF9.ampDAP/M0406/AthalianaCistrome XX ID GRF9.ampDAP:M0406:AthalianaCistrome XX NA GRF9.ampDAP XX DE GRF9.ampDAP XX OS Arabidopsis thaliana XX BF 17726; XX P0 A C G T 01 8 9 4 577 T 02 0 0 598 0 G 03 0 0 0 598 T 04 0 597 0 1 C 05 598 0 0 0 A 06 0 0 594 4 G 07 440 20 66 72 A 08 267 75 124 132 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GRF9.ampDAP:M0406:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GRF9.DAP/M0407/AthalianaCistrome XX ID GRF9.DAP:M0407:AthalianaCistrome XX NA GRF9.DAP XX DE GRF9.DAP XX OS Arabidopsis thaliana XX BF 17726; XX P0 A C G T 01 15 12 17 48 t 02 3 10 4 75 T 03 0 0 92 0 G 04 0 0 0 92 T 05 0 83 0 9 C 06 89 3 0 0 A 07 0 0 92 0 G 08 70 3 9 10 A 09 44 15 19 14 a 10 31 12 28 21 r 11 42 15 11 24 w 12 12 23 22 35 y 13 34 15 12 31 w 14 22 38 22 10 c 15 44 20 11 17 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GRF9.DAP:M0407:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB40.ampDAP/M0409/AthalianaCistrome XX ID ATHB40.ampDAP:M0409:AthalianaCistrome XX NA ATHB40.ampDAP XX DE ATHB40.ampDAP XX OS Arabidopsis thaliana XX BF 12328; XX P0 A C G T 01 226 78 150 145 r 02 189 203 108 99 m 03 351 56 59 133 a 04 137 197 71 194 y 05 14 520 1 64 C 06 599 0 0 0 A 07 599 0 0 0 A 08 0 0 0 599 T 09 291 47 40 221 w 10 599 0 0 0 A 11 0 0 0 599 T 12 90 9 58 442 T 13 176 35 209 179 d 14 173 69 196 161 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB40.ampDAP:M0409:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB5.DAP/M0410/AthalianaCistrome XX ID ATHB5.DAP:M0410:AthalianaCistrome XX NA ATHB5.DAP XX DE ATHB5.DAP XX OS Arabidopsis thaliana XX BF 3982; XX P0 A C G T 01 145 158 88 208 y 02 37 368 0 194 y 03 599 0 0 0 A 04 599 0 0 0 A 05 0 0 0 599 T 06 367 218 3 11 m 07 599 0 0 0 A 08 0 0 0 599 T 09 44 6 53 496 T 10 177 92 221 109 r 11 289 51 113 146 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB5.DAP:M0410:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LMI1.ampDAP/M0411/AthalianaCistrome XX ID LMI1.ampDAP:M0411:AthalianaCistrome XX NA LMI1.ampDAP XX DE LMI1.ampDAP XX OS Arabidopsis thaliana XX BF 8868; XX P0 A C G T 01 92 12 57 437 T 02 15 492 66 25 C 03 501 63 0 34 A 04 598 0 0 0 A 05 0 0 0 598 T 06 6 0 0 592 T 07 598 0 0 0 A 08 0 0 0 598 T 09 0 0 0 598 T 10 51 0 515 32 G 11 138 98 211 151 k 12 128 97 36 337 t 13 147 90 117 244 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LMI1.ampDAP:M0411:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB5.ampDAP/M0412/AthalianaCistrome XX ID ATHB5.ampDAP:M0412:AthalianaCistrome XX NA ATHB5.ampDAP XX DE ATHB5.ampDAP XX OS Arabidopsis thaliana XX BF 3982; XX P0 A C G T 01 133 259 78 130 c 02 494 69 3 34 A 03 595 0 0 5 A 04 0 0 0 600 T 05 27 8 312 253 k 06 599 1 0 0 A 07 0 0 0 600 T 08 0 0 2 598 T 09 190 5 405 0 r 10 209 110 159 122 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB5.ampDAP:M0412:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LMI1.DAP/M0413/AthalianaCistrome XX ID LMI1.DAP:M0413:AthalianaCistrome XX NA LMI1.DAP XX DE LMI1.DAP XX OS Arabidopsis thaliana XX BF 8868; XX P0 A C G T 01 138 188 50 224 y 02 94 28 47 431 T 03 51 404 72 73 c 04 490 70 5 35 A 05 597 1 0 2 A 06 1 0 0 599 T 07 16 2 0 582 T 08 598 0 2 0 A 09 1 0 1 598 T 10 0 0 0 600 T 11 72 1 461 66 G 12 156 98 180 166 d 13 139 97 37 327 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LMI1.DAP:M0413:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB21.ampDAP/M0414/AthalianaCistrome XX ID ATHB21.ampDAP:M0414:AthalianaCistrome XX NA ATHB21.ampDAP XX DE ATHB21.ampDAP XX OS Arabidopsis thaliana XX BF 12322; XX P0 A C G T 01 228 86 123 163 w 02 181 206 99 114 m 03 413 37 57 93 A 04 119 314 29 138 c 05 9 556 0 35 C 06 599 1 0 0 A 07 600 0 0 0 A 08 0 0 0 600 T 09 282 28 9 281 w 10 599 1 0 0 A 11 0 1 0 599 T 12 72 4 31 493 T 13 136 20 300 144 g 14 198 83 177 142 r 15 210 124 87 179 w 16 168 145 110 177 w 17 197 166 70 167 h 18 206 112 60 222 w 19 210 79 56 255 w 20 259 49 38 254 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB21.ampDAP:M0414:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHV.DAP/M0416/AthalianaCistrome XX ID PHV.DAP:M0416:AthalianaCistrome XX NA PHV.DAP XX DE PHV.DAP XX OS Arabidopsis thaliana XX BF 1707; XX P0 A C G T 01 184 66 213 135 r 02 0 83 4 511 T 03 399 195 0 4 m 04 598 0 0 0 A 05 0 0 0 598 T 06 33 455 56 54 C 07 598 0 0 0 A 08 0 0 0 598 T 09 0 45 16 537 T 10 496 1 76 25 A 11 21 304 59 214 y 12 173 130 45 250 w 13 213 55 44 286 w 14 114 71 39 374 t 15 130 153 45 270 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHV.DAP:M0416:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB53.ampDAP/M0420/AthalianaCistrome XX ID ATHB53.ampDAP:M0420:AthalianaCistrome XX NA ATHB53.ampDAP XX DE ATHB53.ampDAP XX OS Arabidopsis thaliana XX BF 12329; XX P0 A C G T 01 133 135 160 164 k 02 119 211 73 189 y 03 161 270 44 117 m 04 445 84 9 54 A 05 592 0 0 0 A 06 0 0 0 592 T 07 211 36 50 295 w 08 592 0 0 0 A 09 0 0 0 592 T 10 0 0 0 592 T 11 44 0 541 7 G 12 149 72 211 160 d 13 135 77 61 319 t 14 94 136 195 167 k 15 131 185 112 164 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB53.ampDAP:M0420:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANL2.ampDAP/M0421/AthalianaCistrome XX ID ANL2.ampDAP:M0421:AthalianaCistrome XX NA ANL2.ampDAP XX DE ANL2.ampDAP XX OS Arabidopsis thaliana XX BF 12250; XX P0 A C G T 01 102 22 251 94 g 02 0 459 0 10 C 03 468 0 0 1 A 04 0 0 0 469 T 05 0 0 0 469 T 06 371 0 2 96 A 07 466 0 3 0 A 08 157 1 0 311 w 09 18 0 46 405 T 10 207 2 241 19 r 11 70 241 38 120 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANL2.ampDAP:M0421:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WOX11.DAP/M0422/AthalianaCistrome XX ID WOX11.DAP:M0422:AthalianaCistrome XX NA WOX11.DAP XX DE WOX11.DAP XX OS Arabidopsis thaliana XX BF 17747; XX P0 A C G T 01 193 0 32 38 A 02 82 31 103 47 r 03 0 14 0 249 T 04 0 0 0 263 T 05 263 0 0 0 A 06 251 0 12 0 A 07 0 29 0 234 T 08 0 6 14 243 T 09 210 0 53 0 A 10 126 53 84 0 r 11 64 32 43 124 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WOX11.DAP:M0422:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HDG7.DAP/M0423/AthalianaCistrome XX ID HDG7.DAP:M0423:AthalianaCistrome XX NA HDG7.DAP XX DE HDG7.DAP XX OS Arabidopsis thaliana XX BF 4027; XX P0 A C G T 01 142 35 153 70 r 02 55 158 6 181 y 03 368 28 0 4 A 04 215 0 0 185 w 05 0 2 0 398 T 06 80 3 1 316 T 07 400 0 0 0 A 08 400 0 0 0 A 09 0 0 0 400 T 10 27 0 361 12 G 11 106 181 4 109 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HDG7.DAP:M0423:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 3XHMGBOX1.DAP/M0424/AthalianaCistrome XX ID 3XHMGBOX1.DAP:M0424:AthalianaCistrome XX NA 3XHMGBOX1.DAP XX DE 3XHMGBOX1.DAP XX OS Arabidopsis thaliana XX BF 12215; XX P0 A C G T 01 161 74 122 39 r 02 44 274 0 78 C 03 0 0 391 5 G 04 46 0 350 0 G 05 31 282 0 83 C 06 0 0 386 10 G 07 54 0 331 11 G 08 140 129 17 110 h 09 38 1 285 72 G 10 134 49 172 41 r 11 162 68 22 144 w 12 94 33 179 90 g 13 102 58 170 66 r 14 100 127 75 94 m 15 67 51 224 54 g 16 74 69 216 37 g 17 90 131 88 87 c 18 105 40 210 41 r 19 100 47 189 60 r 20 122 98 62 114 w 21 73 31 199 93 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=3XHMGBOX1.DAP:M0424:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC 3XHMGBOX1.ampDAP/M0425/AthalianaCistrome XX ID 3XHMGBOX1.ampDAP:M0425:AthalianaCistrome XX NA 3XHMGBOX1.ampDAP XX DE 3XHMGBOX1.ampDAP XX OS Arabidopsis thaliana XX BF 12215; XX P0 A C G T 01 166 55 67 128 w 02 3 316 3 94 C 03 9 407 0 0 C 04 229 0 84 103 a 05 7 353 6 50 C 06 17 377 1 21 C 07 261 0 86 69 a 08 49 290 12 65 C 09 38 349 8 21 C 10 220 8 108 80 r 11 10 303 35 68 C 12 42 339 0 35 C 13 202 0 77 137 w 14 13 346 16 41 C 15 38 335 4 39 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=3XHMGBOX1.ampDAP:M0425:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB6.DAP/M0430/AthalianaCistrome XX ID ATHB6.DAP:M0430:AthalianaCistrome XX NA ATHB6.DAP XX DE ATHB6.DAP XX OS Arabidopsis thaliana XX BF 11165; XX P0 A C G T 01 12 347 0 241 y 02 581 19 0 0 A 03 600 0 0 0 A 04 0 0 0 600 T 05 181 309 65 45 m 06 600 0 0 0 A 07 9 0 6 585 T 08 112 34 149 305 t 09 166 152 110 172 h 10 240 80 87 193 w 11 137 151 121 191 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB6.DAP:M0430:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB20.ampDAP/M0431/AthalianaCistrome XX ID ATHB20.ampDAP:M0431:AthalianaCistrome XX NA ATHB20.ampDAP XX DE ATHB20.ampDAP XX OS Arabidopsis thaliana XX BF 12321; XX P0 A C G T 01 82 86 59 369 t 02 61 318 43 174 y 03 549 20 0 27 A 04 596 0 0 0 A 05 0 0 0 596 T 06 0 0 176 420 K 07 596 0 0 0 A 08 0 0 0 596 T 09 3 1 0 592 T 10 208 0 349 39 r 11 279 59 161 97 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB20.ampDAP:M0431:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT2.ampDAP/M0432/AthalianaCistrome XX ID HAT2.ampDAP:M0432:AthalianaCistrome XX NA HAT2.ampDAP XX DE HAT2.ampDAP XX OS Arabidopsis thaliana XX BF 12419; XX P0 A C G T 01 147 150 107 196 y 02 20 272 0 308 y 03 581 19 0 0 A 04 599 1 0 0 A 05 0 0 0 600 T 06 11 450 38 101 C 07 599 1 0 0 A 08 8 4 0 588 T 09 106 15 23 456 T 10 184 38 141 237 w 11 199 121 135 145 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT2.ampDAP:M0432:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB18.ampDAP/M0433/AthalianaCistrome XX ID ATHB18.ampDAP:M0433:AthalianaCistrome XX NA ATHB18.ampDAP XX DE ATHB18.ampDAP XX OS Arabidopsis thaliana XX BF 12320; XX P0 A C G T 01 154 185 119 134 m 02 66 334 8 184 y 03 571 6 4 11 A 04 592 0 0 0 A 05 0 0 0 592 T 06 97 0 457 38 G 07 592 0 0 0 A 08 0 0 0 592 T 09 1 0 7 584 T 10 200 0 392 0 r 11 175 82 261 74 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB18.ampDAP:M0433:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PDF2.DAP/M0434/AthalianaCistrome XX ID PDF2.DAP:M0434:AthalianaCistrome XX NA PDF2.DAP XX DE PDF2.DAP XX OS Arabidopsis thaliana XX BF 4030; XX P0 A C G T 01 284 80 99 137 a 02 395 66 80 59 a 03 331 70 113 86 a 04 333 46 190 31 r 05 50 4 530 16 G 06 499 40 13 48 A 07 596 1 0 3 A 08 0 0 70 530 T 09 595 1 0 4 A 10 0 1 3 596 T 11 54 9 31 506 T 12 3 594 1 2 C 13 2 287 164 147 s 14 256 110 107 127 a 15 306 76 50 168 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PDF2.DAP:M0434:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EDT1.DAP/M0435/AthalianaCistrome XX ID EDT1.DAP:M0435:AthalianaCistrome XX NA EDT1.DAP XX DE EDT1.DAP XX OS Arabidopsis thaliana XX BF 11164; XX P0 A C G T 01 102 10 322 156 k 02 0 586 0 4 C 03 582 3 0 5 A 04 0 0 0 590 T 05 0 1 0 589 T 06 400 0 3 187 w 07 590 0 0 0 A 08 344 8 3 235 w 09 21 5 49 515 T 10 225 7 302 56 r 11 100 229 46 215 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EDT1.DAP:M0435:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WUS1.ampDAP/M0436/AthalianaCistrome XX ID WUS1.ampDAP:M0436:AthalianaCistrome XX NA WUS1.ampDAP XX DE WUS1.ampDAP XX OS Arabidopsis thaliana XX BF 17727; XX P0 A C G T 01 49 3 19 529 T 02 41 1 557 1 G 03 554 0 2 44 A 04 341 35 2 222 w 05 5 0 2 593 T 06 7 6 587 0 G 07 563 13 16 8 A 08 239 63 10 288 w 09 52 6 25 517 T 10 85 28 427 60 G 11 369 43 62 126 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WUS1.ampDAP:M0436:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HDG1.ampDAP/M0437/AthalianaCistrome XX ID HDG1.ampDAP:M0437:AthalianaCistrome XX NA HDG1.ampDAP XX DE HDG1.ampDAP XX OS Arabidopsis thaliana XX BF 12421; XX P0 A C G T 01 187 58 242 98 r 02 39 189 10 347 y 03 542 35 1 7 A 04 371 0 3 211 w 05 0 0 0 585 T 06 112 0 0 473 T 07 584 0 1 0 A 08 585 0 0 0 A 09 0 0 0 585 T 10 50 2 501 32 G 11 150 296 12 127 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HDG1.ampDAP:M0437:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB13.ampDAP/M0439/AthalianaCistrome XX ID ATHB13.ampDAP:M0439:AthalianaCistrome XX NA ATHB13.ampDAP XX DE ATHB13.ampDAP XX OS Arabidopsis thaliana XX BF 12319; XX P0 A C G T 01 123 142 82 224 t 02 68 312 6 185 y 03 571 0 0 0 A 04 571 0 0 0 A 05 0 0 0 571 T 06 514 7 50 0 A 07 571 0 0 0 A 08 0 0 0 571 T 09 18 0 43 510 T 10 143 56 322 50 r 11 347 57 64 103 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB13.ampDAP:M0439:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB6.ampDAP/M0440/AthalianaCistrome XX ID ATHB6.ampDAP:M0440:AthalianaCistrome XX NA ATHB6.ampDAP XX DE ATHB6.ampDAP XX OS Arabidopsis thaliana XX BF 11165; XX P0 A C G T 01 127 139 109 202 t 02 21 436 0 120 C 03 577 0 0 0 A 04 577 0 0 0 A 05 0 0 0 577 T 06 434 140 0 3 A 07 577 0 0 0 A 08 0 0 0 577 T 09 31 0 31 515 T 10 139 59 345 34 g 11 292 74 81 130 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB6.ampDAP:M0440:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT5.ampDAP/M0441/AthalianaCistrome XX ID HAT5.ampDAP:M0441:AthalianaCistrome XX NA HAT5.ampDAP XX DE HAT5.ampDAP XX OS Arabidopsis thaliana XX BF 3981; XX P0 A C G T 01 258 72 62 179 w 02 161 140 91 179 w 03 62 374 0 135 c 04 571 0 0 0 A 05 571 0 0 0 A 06 0 0 0 571 T 07 543 10 18 0 A 08 571 0 0 0 A 09 0 0 0 571 T 10 14 0 42 515 T 11 132 69 333 37 g 12 319 56 63 133 a 13 212 64 122 173 w 14 156 107 131 177 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT5.ampDAP:M0441:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT5.DAP/M0442/AthalianaCistrome XX ID HAT5.DAP:M0442:AthalianaCistrome XX NA HAT5.DAP XX DE HAT5.DAP XX OS Arabidopsis thaliana XX BF 3981; XX P0 A C G T 01 195 131 75 195 w 02 121 316 0 159 y 03 596 0 0 0 A 04 596 0 0 0 A 05 0 0 3 593 T 06 579 0 9 8 A 07 596 0 0 0 A 08 1 0 0 595 T 09 27 0 45 524 T 10 154 68 279 95 r 11 327 42 63 164 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT5.DAP:M0442:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT1.DAP/M0444/AthalianaCistrome XX ID HAT1.DAP:M0444:AthalianaCistrome XX NA HAT1.DAP XX DE HAT1.DAP XX OS Arabidopsis thaliana XX BF 11172; XX P0 A C G T 01 39 78 44 57 y 02 52 62 19 85 y 03 183 1 0 34 A 04 218 0 0 0 A 05 0 0 0 218 T 06 0 14 191 13 G 07 218 0 0 0 A 08 0 0 0 218 T 09 0 0 0 218 T 10 105 0 113 0 r 11 56 40 80 42 r 12 58 31 28 101 w 13 90 23 16 89 w 14 113 24 33 48 a 15 88 11 22 97 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT1.DAP:M0444:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAT1.ampDAP/M0445/AthalianaCistrome XX ID HAT1.ampDAP:M0445:AthalianaCistrome XX NA HAT1.ampDAP XX DE HAT1.ampDAP XX OS Arabidopsis thaliana XX BF 11172; XX P0 A C G T 01 24 50 27 29 c 02 23 54 10 43 y 03 118 1 0 11 A 04 130 0 0 0 A 05 0 0 0 130 T 06 1 0 129 0 G 07 130 0 0 0 A 08 0 0 0 130 T 09 0 0 1 129 T 10 66 0 63 1 r 11 43 26 40 21 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAT1.ampDAP:M0445:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WUS1.DAP/M0447/AthalianaCistrome XX ID WUS1.DAP:M0447:AthalianaCistrome XX NA WUS1.DAP XX DE WUS1.DAP XX OS Arabidopsis thaliana XX BF 17727; XX P0 A C G T 01 11 12 0 58 T 02 3 78 0 0 C 03 81 0 0 0 A 04 32 0 11 38 w 05 4 0 0 77 T 06 0 79 1 1 C 07 75 0 0 6 A 08 29 2 2 48 w 09 9 2 2 68 T 10 0 55 3 23 y 11 70 1 3 7 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WUS1.DAP:M0447:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFA6B.DAP/M0448/AthalianaCistrome XX ID HSFA6B.DAP:M0448:AthalianaCistrome XX NA HSFA6B.DAP XX DE HSFA6B.DAP XX OS Arabidopsis thaliana XX BF 12427; XX P0 A C G T 01 328 61 168 43 r 02 1 1 595 3 G 03 580 2 8 10 A 04 509 6 16 69 A 05 73 154 291 82 s 06 159 191 131 119 m 07 70 34 13 483 T 08 22 8 16 554 T 09 4 572 24 0 C 10 15 101 46 438 T 11 411 45 136 8 A 12 0 5 595 0 G 13 562 13 6 19 A 14 420 34 59 87 A 15 139 121 242 98 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFA6B.DAP:M0448:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFA6B.ampDAP/M0449/AthalianaCistrome XX ID HSFA6B.ampDAP:M0449:AthalianaCistrome XX NA HSFA6B.ampDAP XX DE HSFA6B.ampDAP XX OS Arabidopsis thaliana XX BF 12427; XX P0 A C G T 01 370 57 143 28 a 02 0 0 598 0 G 03 589 0 1 8 A 04 564 2 0 32 A 05 53 134 333 78 g 06 174 216 100 108 m 07 59 28 6 505 T 08 8 0 1 589 T 09 0 597 1 0 C 10 5 63 27 503 T 11 487 16 95 0 A 12 0 0 598 0 G 13 587 2 0 9 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFA6B.ampDAP:M0449:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSF3.DAP/M0450/AthalianaCistrome XX ID HSF3.DAP:M0450:AthalianaCistrome XX NA HSF3.DAP XX DE HSF3.DAP XX OS Arabidopsis thaliana XX BF 12423; XX P0 A C G T 01 1 0 598 1 G 02 580 2 7 11 A 03 538 5 20 37 A 04 95 90 332 83 g 05 134 244 140 82 c 06 97 28 29 446 T 07 24 2 13 561 T 08 0 594 6 0 C 09 18 115 39 428 T 10 428 44 112 16 A 11 1 2 596 1 G 12 547 18 17 18 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSF3.DAP:M0450:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFC1.DAP/M0451/AthalianaCistrome XX ID HSFC1.DAP:M0451:AthalianaCistrome XX NA HSFC1.DAP XX DE HSFC1.DAP XX OS Arabidopsis thaliana XX BF 8879; XX P0 A C G T 01 0 599 0 1 C 02 0 102 15 483 T 03 516 19 65 0 A 04 0 3 597 0 G 05 588 2 0 10 A 06 538 1 18 43 A 07 123 98 241 138 g 08 70 363 127 40 c 09 36 1 0 563 T 10 6 0 0 594 T 11 0 600 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFC1.DAP:M0451:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFC1.ampDAP/M0452/AthalianaCistrome XX ID HSFC1.ampDAP:M0452:AthalianaCistrome XX NA HSFC1.ampDAP XX DE HSFC1.ampDAP XX OS Arabidopsis thaliana XX BF 8879; XX P0 A C G T 01 98 25 23 78 w 02 24 34 88 78 k 03 32 111 35 46 c 04 13 6 2 203 T 05 0 0 0 224 T 06 0 224 0 0 C 07 0 21 2 201 T 08 210 5 9 0 A 09 0 0 224 0 G 10 223 0 0 1 A 11 203 0 4 17 A 12 44 47 97 36 g 13 25 143 42 14 c 14 7 0 0 217 T 15 0 0 0 224 T 16 0 224 0 0 C 17 9 61 16 138 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFC1.ampDAP:M0452:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSF7.ampDAP/M0453/AthalianaCistrome XX ID HSF7.ampDAP:M0453:AthalianaCistrome XX NA HSF7.ampDAP XX DE HSF7.ampDAP XX OS Arabidopsis thaliana XX BF 12424; XX P0 A C G T 01 364 53 148 33 a 02 0 5 588 5 G 03 576 3 6 13 A 04 561 0 3 34 A 05 77 116 328 77 g 06 107 249 123 119 c 07 54 16 4 524 T 08 13 0 0 585 T 09 0 597 1 0 C 10 4 79 29 486 T 11 481 15 99 3 A 12 12 4 581 1 G 13 585 3 3 7 A 14 481 27 35 55 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSF7.ampDAP:M0453:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSF6.DAP/M0454/AthalianaCistrome XX ID HSF6.DAP:M0454:AthalianaCistrome XX NA HSF6.DAP XX DE HSF6.DAP XX OS Arabidopsis thaliana XX BF 8878; XX P0 A C G T 01 12 3 574 11 G 02 578 0 10 12 A 03 573 0 6 21 A 04 81 78 352 89 g 05 99 274 132 95 c 06 46 4 3 547 T 07 10 0 3 587 T 08 0 598 0 2 C 09 5 157 35 403 y 10 461 6 97 36 A 11 111 17 429 43 G 12 507 11 39 43 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSF6.DAP:M0454:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFB3.ampDAP/M0455/AthalianaCistrome XX ID HSFB3.ampDAP:M0455:AthalianaCistrome XX NA HSFB3.ampDAP XX DE HSFB3.ampDAP XX OS Arabidopsis thaliana XX BF 12428; XX P0 A C G T 01 436 21 53 47 A 02 498 4 0 55 A 03 65 98 313 81 g 04 51 332 114 60 c 05 29 0 5 523 T 06 1 0 4 552 T 07 0 551 1 5 C 08 0 111 27 419 T 09 501 6 44 6 A 10 91 10 397 59 G 11 500 0 34 23 A 12 447 17 35 58 A 13 129 105 232 91 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFB3.ampDAP:M0455:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSF7.DAP/M0456/AthalianaCistrome XX ID HSF7.DAP:M0456:AthalianaCistrome XX NA HSF7.DAP XX DE HSF7.DAP XX OS Arabidopsis thaliana XX BF 12424; XX P0 A C G T 01 57 35 14 482 T 02 5 10 2 571 T 03 0 586 0 2 C 04 1 115 19 453 T 05 478 23 79 8 A 06 0 3 585 0 G 07 568 3 0 17 A 08 500 8 18 62 A 09 121 123 220 124 g 10 75 302 120 91 c 11 31 20 4 533 T 12 10 4 2 572 T 13 1 583 0 4 C 14 27 145 27 389 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSF7.DAP:M0456:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSF21.DAP/M0457/AthalianaCistrome XX ID HSF21.DAP:M0457:AthalianaCistrome XX NA HSF21.DAP XX DE HSF21.DAP XX OS Arabidopsis thaliana XX BF 12422; XX P0 A C G T 01 136 120 84 259 t 02 142 189 119 149 c 03 171 122 103 203 w 04 324 56 141 78 a 05 92 43 413 51 G 06 477 45 47 30 A 07 482 17 27 73 A 08 73 113 289 124 g 09 64 345 111 79 c 10 58 11 10 520 T 11 5 3 0 591 T 12 2 592 0 5 C 13 3 44 17 535 T 14 537 4 54 4 A 15 6 5 581 7 G 16 590 0 5 4 A 17 511 21 17 50 A 18 117 81 325 76 g 19 198 225 96 80 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSF21.DAP:M0457:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFA6A.DAP/M0458/AthalianaCistrome XX ID HSFA6A.DAP:M0458:AthalianaCistrome XX NA HSFA6A.DAP XX DE HSFA6A.DAP XX OS Arabidopsis thaliana XX BF 17764; XX P0 A C G T 01 0 0 580 0 G 02 577 0 0 3 A 03 545 4 4 27 A 04 41 140 332 67 g 05 185 153 108 134 m 06 50 20 2 508 T 07 3 0 2 575 T 08 0 579 1 0 C 09 1 80 22 477 T 10 456 17 107 0 A 11 0 1 579 0 G 12 572 0 0 8 A 13 451 16 50 63 A 14 138 117 223 102 g 15 186 190 87 117 m 16 198 66 73 243 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFA6A.DAP:M0458:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFA1E.DAP/M0459/AthalianaCistrome XX ID HSFA1E.DAP:M0459:AthalianaCistrome XX NA HSFA1E.DAP XX DE HSFA1E.DAP XX OS Arabidopsis thaliana XX BF 12425; XX P0 A C G T 01 324 30 130 24 r 02 0 0 504 4 G 03 502 0 2 4 A 04 473 1 14 20 A 05 76 85 281 66 g 06 97 202 121 88 c 07 61 20 7 420 T 08 9 0 2 497 T 09 1 505 2 0 C 10 1 64 22 421 T 11 405 15 86 2 A 12 6 0 501 1 G 13 497 5 4 2 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFA1E.DAP:M0459:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFA1E.ampDAP/M0460/AthalianaCistrome XX ID HSFA1E.ampDAP:M0460:AthalianaCistrome XX NA HSFA1E.ampDAP XX DE HSFA1E.ampDAP XX OS Arabidopsis thaliana XX BF 12425; XX P0 A C G T 01 305 31 109 16 a 02 5 0 455 1 G 03 455 0 6 0 A 04 433 2 12 14 A 05 57 92 271 41 g 06 97 194 94 76 c 07 57 15 5 384 T 08 18 0 5 438 T 09 1 445 15 0 C 10 22 39 6 394 T 11 393 18 50 0 A 12 1 3 452 5 G 13 451 3 3 4 A 14 357 14 40 50 A 15 88 88 195 90 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFA1E.ampDAP:M0460:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFA6A.ampDAP/M0461/AthalianaCistrome XX ID HSFA6A.ampDAP:M0461:AthalianaCistrome XX NA HSFA6A.ampDAP XX DE HSFA6A.ampDAP XX OS Arabidopsis thaliana XX BF 17764; XX P0 A C G T 01 28 19 11 292 T 02 0 0 0 350 T 03 1 349 0 0 C 04 0 27 2 321 T 05 326 6 18 0 A 06 0 0 350 0 G 07 348 0 0 2 A 08 297 0 12 41 A 09 64 69 113 104 k 10 39 201 82 28 c 11 16 0 1 333 T 12 6 0 0 344 T 13 0 349 0 1 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFA6A.ampDAP:M0461:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFB4.DAP/M0462/AthalianaCistrome XX ID HSFB4.DAP:M0462:AthalianaCistrome XX NA HSFB4.DAP XX DE HSFB4.DAP XX OS Arabidopsis thaliana XX BF 12429; XX P0 A C G T 01 140 11 41 8 A 02 0 1 199 0 G 03 197 0 1 2 A 04 193 1 3 3 A 05 24 31 126 19 g 06 38 102 34 26 c 07 22 5 2 171 T 08 3 2 4 191 T 09 0 197 3 0 C 10 5 26 9 160 T 11 163 3 34 0 A 12 0 0 200 0 G 13 196 0 0 4 A 14 184 0 7 9 A 15 46 29 99 26 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFB4.DAP:M0462:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFB3.DAP/M0463/AthalianaCistrome XX ID HSFB3.DAP:M0463:AthalianaCistrome XX NA HSFB3.DAP XX DE HSFB3.DAP XX OS Arabidopsis thaliana XX BF 12428; XX P0 A C G T 01 12 42 24 22 c 02 1 6 8 85 T 03 1 9 2 88 T 04 0 98 2 0 C 05 0 5 2 93 T 06 87 5 8 0 A 07 7 0 93 0 G 08 89 6 4 1 A 09 65 9 9 17 a 10 16 0 53 31 k 11 14 49 18 19 c 12 9 4 6 81 T 13 11 12 3 74 T 14 9 61 8 22 c 15 12 33 11 44 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFB3.DAP:M0463:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WLIM2A.DAP/M0464/AthalianaCistrome XX ID WLIM2A.DAP:M0464:AthalianaCistrome XX NA WLIM2A.DAP XX DE WLIM2A.DAP XX OS Arabidopsis thaliana XX BF 12540; XX P0 A C G T 01 0 0 0 167 T 02 0 167 0 0 C 03 167 0 0 0 A 04 157 0 0 10 A 05 152 0 15 0 A 06 0 0 0 167 T 07 35 56 46 30 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WLIM2A.DAP:M0464:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD2.DAP/M0465/AthalianaCistrome XX ID LBD2.DAP:M0465:AthalianaCistrome XX NA LBD2.DAP XX DE LBD2.DAP XX OS Arabidopsis thaliana XX BF 12440; XX P0 A C G T 01 61 290 203 46 s 02 28 568 2 2 C 03 9 0 555 36 G 04 445 11 97 47 A 05 238 118 102 142 a 06 318 40 185 57 r 07 432 15 53 100 A 08 271 50 51 228 w 09 248 74 135 143 a 10 117 88 101 294 t 11 47 544 0 9 C 12 0 0 600 0 G 13 24 101 432 43 G 14 313 147 45 95 a 15 145 49 323 83 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD2.DAP:M0465:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD18.ampDAP/M0466/AthalianaCistrome XX ID LBD18.ampDAP:M0466:AthalianaCistrome XX NA LBD18.ampDAP XX DE LBD18.ampDAP XX OS Arabidopsis thaliana XX BF 17723; XX P0 A C G T 01 16 581 0 0 C 02 122 40 298 137 g 03 65 92 329 111 g 04 273 56 135 133 a 05 157 1 25 414 W 06 70 24 8 495 T 07 49 90 2 456 T 08 54 99 21 423 T 09 126 351 86 34 c 10 101 357 43 96 c 11 0 0 597 0 G 12 1 171 425 0 S 13 222 221 63 91 m 14 199 44 278 76 r 15 265 83 162 87 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD18.ampDAP:M0466:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD19.DAP/M0467/AthalianaCistrome XX ID LBD19.DAP:M0467:AthalianaCistrome XX NA LBD19.DAP XX DE LBD19.DAP XX OS Arabidopsis thaliana XX BF 12439; XX P0 A C G T 01 15 447 129 9 C 02 11 586 3 0 C 03 68 47 376 109 g 04 45 70 378 107 g 05 434 3 129 34 A 06 475 0 79 46 A 07 542 5 26 27 A 08 400 17 11 172 w 09 86 139 43 332 t 10 105 395 69 31 c 11 107 376 26 91 c 12 0 0 595 5 G 13 7 140 430 23 G 14 277 123 93 107 a 15 209 40 226 125 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD19.DAP:M0467:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD2.ampDAP/M0468/AthalianaCistrome XX ID LBD2.ampDAP:M0468:AthalianaCistrome XX NA LBD2.ampDAP XX DE LBD2.ampDAP XX OS Arabidopsis thaliana XX BF 12440; XX P0 A C G T 01 34 390 163 13 s 02 3 597 0 0 C 03 4 0 557 39 G 04 512 7 47 34 A 05 284 91 99 126 a 06 478 17 67 38 A 07 527 4 24 45 A 08 311 37 43 209 w 09 229 81 110 180 w 10 75 77 47 401 t 11 58 538 2 2 C 12 0 0 593 7 G 13 7 110 456 27 G 14 331 58 89 122 a 15 173 77 222 128 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD2.ampDAP:M0468:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ASL18.ampDAP/M0469/AthalianaCistrome XX ID ASL18.ampDAP:M0469:AthalianaCistrome XX NA ASL18.ampDAP XX DE ASL18.ampDAP XX OS Arabidopsis thaliana XX BF 8883; XX P0 A C G T 01 36 404 157 3 s 02 13 586 1 0 C 03 94 25 382 99 g 04 47 107 340 106 g 05 262 57 137 144 a 06 138 0 29 433 T 07 7 44 9 540 T 08 56 92 5 447 T 09 39 110 43 408 T 10 126 309 114 51 c 11 84 385 69 62 c 12 0 0 584 16 G 13 8 154 416 22 S 14 206 226 71 97 m 15 216 44 246 94 r 16 210 111 168 111 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ASL18.ampDAP:M0469:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD18.DAP/M0470/AthalianaCistrome XX ID LBD18.DAP:M0470:AthalianaCistrome XX NA LBD18.DAP XX DE LBD18.DAP XX OS Arabidopsis thaliana XX BF 17723; XX P0 A C G T 01 167 120 84 229 w 02 133 171 60 236 y 03 145 79 130 246 t 04 105 248 87 160 y 05 90 346 16 148 c 06 71 41 232 256 k 07 17 403 170 10 s 08 19 580 1 0 C 09 104 38 365 93 g 10 62 103 297 138 g 11 293 74 131 102 a 12 154 11 49 386 w 13 46 76 7 471 T 14 55 127 2 416 T 15 63 117 6 414 T 16 85 409 65 41 C 17 77 407 47 69 c 18 0 0 571 29 G 19 20 204 352 24 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD18.DAP:M0470:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD13.ampDAP/M0471/AthalianaCistrome XX ID LBD13.ampDAP:M0471:AthalianaCistrome XX NA LBD13.ampDAP XX DE LBD13.ampDAP XX OS Arabidopsis thaliana XX BF 12437; XX P0 A C G T 01 34 494 4 66 C 02 34 6 507 51 G 03 4 210 384 0 s 04 17 581 0 0 C 05 23 0 560 15 G 06 116 110 280 92 g 07 298 94 106 100 a 08 245 14 170 169 d 09 225 35 115 223 w 10 188 88 18 304 w 11 109 86 141 262 t 12 150 113 256 79 r 13 45 498 1 54 C 14 0 0 598 0 G 15 1 40 555 2 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD13.ampDAP:M0471:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD23.ampDAP/M0472/AthalianaCistrome XX ID LBD23.ampDAP:M0472:AthalianaCistrome XX NA LBD23.ampDAP XX DE LBD23.ampDAP XX OS Arabidopsis thaliana XX BF 12441; XX P0 A C G T 01 241 69 203 87 r 02 33 23 542 2 G 03 35 565 0 0 C 04 50 14 462 74 G 05 162 70 145 223 w 06 313 63 142 82 a 07 370 46 101 83 a 08 376 20 172 32 r 09 337 60 72 131 a 10 136 122 110 232 t 11 178 146 176 100 r 12 61 447 19 73 C 13 0 2 585 13 G 14 6 472 32 90 C 15 144 159 87 210 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD23.ampDAP:M0472:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LOB.DAP/M0473/AthalianaCistrome XX ID LOB.DAP:M0473:AthalianaCistrome XX NA LOB.DAP XX DE LOB.DAP XX OS Arabidopsis thaliana XX BF 12445; XX P0 A C G T 01 138 50 127 258 t 02 44 407 28 94 C 03 34 473 1 65 C 04 81 17 321 154 k 05 5 492 55 21 C 06 15 557 1 0 C 07 53 3 398 119 G 08 16 386 57 114 c 09 121 316 31 105 c 10 154 6 213 200 d 11 63 288 36 186 y 12 86 351 3 133 c 13 84 45 202 242 k 14 56 446 20 51 C 15 26 526 2 19 C 16 13 0 507 53 G 17 5 428 115 25 C 18 42 471 7 53 C 19 61 4 452 56 G 20 46 296 114 117 c 21 157 229 72 115 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LOB.DAP:M0473:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD23.DAP/M0474/AthalianaCistrome XX ID LBD23.DAP:M0474:AthalianaCistrome XX NA LBD23.DAP XX DE LBD23.DAP XX OS Arabidopsis thaliana XX BF 12441; XX P0 A C G T 01 208 79 202 99 r 02 32 36 515 5 G 03 11 577 0 0 C 04 17 0 521 50 G 05 111 141 158 178 k 06 281 78 134 95 a 07 191 51 51 295 w 08 0 127 20 441 T 09 79 113 39 357 t 10 81 152 66 289 y 11 191 166 100 131 m 12 57 504 0 27 C 13 0 0 583 5 G 14 1 530 19 38 C 15 89 174 82 243 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD23.DAP:M0474:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD13.DAP/M0475/AthalianaCistrome XX ID LBD13.DAP:M0475:AthalianaCistrome XX NA LBD13.DAP XX DE LBD13.DAP XX OS Arabidopsis thaliana XX BF 12437; XX P0 A C G T 01 66 382 27 108 c 02 79 25 417 62 G 03 11 244 328 0 s 04 31 548 0 4 C 05 24 0 559 0 G 06 118 58 320 87 g 07 314 83 98 88 a 08 258 10 185 130 r 09 265 27 127 164 w 10 196 94 23 270 w 11 117 75 155 236 k 12 166 87 289 41 r 13 29 524 0 30 C 14 3 0 577 3 G 15 2 41 534 6 G 16 142 306 20 115 c 17 92 20 436 35 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD13.DAP:M0475:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ASL18.DAP/M0476/AthalianaCistrome XX ID ASL18.DAP:M0476:AthalianaCistrome XX NA ASL18.DAP XX DE ASL18.DAP XX OS Arabidopsis thaliana XX BF 8883; XX P0 A C G T 01 42 365 132 34 c 02 28 539 6 0 C 03 27 75 389 82 g 04 54 53 383 83 g 05 421 8 93 51 A 06 428 0 102 43 A 07 462 12 60 39 A 08 371 39 9 154 w 09 102 119 77 275 t 10 121 314 89 49 c 11 67 386 22 98 c 12 2 6 548 17 G 13 7 132 407 27 G 14 268 186 47 72 m 15 186 20 292 75 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ASL18.DAP:M0476:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AS2.DAP/M0477/AthalianaCistrome XX ID AS2.DAP:M0477:AthalianaCistrome XX NA AS2.DAP XX DE AS2.DAP XX OS Arabidopsis thaliana XX BF 12254; XX P0 A C G T 01 76 151 55 157 y 02 98 221 26 94 c 03 91 47 123 178 k 04 45 272 18 104 c 05 33 362 10 34 C 06 51 14 275 99 g 07 2 372 65 0 C 08 2 433 2 2 C 09 28 0 357 54 G 10 29 233 51 126 y 11 127 163 52 97 m 12 141 16 102 180 w 13 73 155 22 189 y 14 71 192 10 166 y 15 65 55 110 209 k 16 54 298 18 69 c 17 23 407 0 9 C 18 5 1 411 22 G 19 3 287 133 16 s 20 34 350 16 39 C 21 76 8 319 36 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AS2.DAP:M0477:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SVP.ampDAP/M0479/AthalianaCistrome XX ID SVP.ampDAP:M0479:AthalianaCistrome XX NA SVP.ampDAP XX DE SVP.ampDAP XX OS Arabidopsis thaliana XX BF 9989; XX P0 A C G T 01 95 16 126 344 t 02 180 23 148 230 d 03 39 531 0 11 C 04 0 540 0 41 C 05 179 223 123 56 m 06 419 8 94 60 A 07 546 0 13 22 A 08 421 0 0 160 W 09 428 65 33 55 A 10 170 123 146 142 r 11 21 0 560 0 G 12 0 0 581 0 G 13 310 97 5 169 w 14 525 27 0 29 A 15 505 14 30 32 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SVP.ampDAP:M0479:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SVP.DAP/M0480/AthalianaCistrome XX ID SVP.DAP:M0480:AthalianaCistrome XX NA SVP.DAP XX DE SVP.DAP XX OS Arabidopsis thaliana XX BF 9989; XX P0 A C G T 01 276 60 50 209 w 02 114 229 91 161 y 03 27 20 5 543 T 04 22 0 19 554 T 05 139 1 75 380 t 06 0 595 0 0 C 07 0 552 0 43 C 08 141 142 96 216 t 09 54 32 51 458 T 10 161 0 0 434 W 11 32 2 0 561 T 12 71 58 10 456 T 13 70 75 218 232 k 14 48 0 547 0 G 15 5 0 559 31 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SVP.DAP:M0480:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL15.ampDAP/M0482/AthalianaCistrome XX ID AGL15.ampDAP:M0482:AthalianaCistrome XX NA AGL15.ampDAP XX DE AGL15.ampDAP XX OS Arabidopsis thaliana XX BF 3011; XX P0 A C G T 01 225 64 76 219 w 02 262 46 82 194 w 03 117 235 139 93 c 04 49 38 6 491 T 05 16 0 2 566 T 06 89 11 27 457 T 07 1 583 0 0 C 08 0 427 0 157 Y 09 197 85 57 245 w 10 101 91 48 344 t 11 172 3 1 408 W 12 7 10 1 566 T 13 87 54 34 409 T 14 135 40 174 235 k 15 122 1 461 0 G 16 0 5 552 27 G 17 309 62 37 176 w 18 505 24 7 48 A 19 440 12 40 92 A 20 94 160 200 130 s 21 145 85 70 284 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL15.ampDAP:M0482:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL25.ampDAP/M0486/AthalianaCistrome XX ID AGL25.ampDAP:M0486:AthalianaCistrome XX NA AGL25.ampDAP XX DE AGL25.ampDAP XX OS Arabidopsis thaliana XX BF 9926; XX P0 A C G T 01 58 247 98 53 c 02 10 11 7 428 T 03 12 0 4 440 T 04 29 0 15 412 T 05 6 445 0 5 C 06 11 348 11 86 C 07 217 37 15 187 w 08 51 28 28 349 T 09 94 6 29 327 T 10 23 4 2 427 T 11 87 30 20 319 T 12 83 39 73 261 t 13 117 4 323 12 R 14 28 5 372 51 G 15 280 63 21 92 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL25.ampDAP:M0486:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL16.ampDAP/M0489/AthalianaCistrome XX ID AGL16.ampDAP:M0489:AthalianaCistrome XX NA AGL16.ampDAP XX DE AGL16.ampDAP XX OS Arabidopsis thaliana XX BF 12220; XX P0 A C G T 01 15 59 24 7 c 02 2 1 2 100 T 03 0 0 0 105 T 04 7 2 6 90 T 05 0 105 0 0 C 06 0 93 0 12 C 07 25 23 2 55 t 08 20 13 5 67 t 09 32 0 0 73 W 10 1 1 0 103 T 11 17 15 7 66 t 12 29 6 34 36 d 13 14 0 91 0 G 14 1 0 104 0 G 15 63 7 2 33 w 16 99 1 2 3 A 17 91 1 4 9 A 18 17 22 43 23 g 19 18 13 9 65 t 20 18 33 9 45 y 21 29 12 12 52 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL16.ampDAP:M0489:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FEM111.DAP/M0491/AthalianaCistrome XX ID FEM111.DAP:M0491:AthalianaCistrome XX NA FEM111.DAP XX DE FEM111.DAP XX OS Arabidopsis thaliana XX BF 12404; XX P0 A C G T 01 0 0 0 54 T 02 0 0 54 0 G 03 0 0 54 0 G 04 0 0 0 54 T 05 0 0 54 0 G 06 54 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FEM111.DAP:M0491:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G23930.DAP/M0492/AthalianaCistrome XX ID AT5G23930.DAP:M0492:AthalianaCistrome XX NA AT5G23930.DAP XX DE AT5G23930.DAP XX OS Arabidopsis thaliana XX BF 12309; XX P0 A C G T 01 127 272 69 123 c 02 165 75 201 150 d 03 79 349 42 121 c 04 108 332 53 98 c 05 136 60 292 103 g 06 59 388 52 92 c 07 88 378 47 78 c 08 183 50 251 107 r 09 50 358 44 139 c 10 96 372 6 117 c 11 200 30 200 161 d 12 24 387 56 124 c 13 138 430 12 11 C 14 36 1 509 45 G 15 0 585 3 3 C 16 31 558 0 2 C 17 62 0 514 15 G 18 0 524 5 62 C 19 8 572 0 11 C 20 205 0 322 64 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G23930.DAP:M0492:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB67.DAP/M0495/AthalianaCistrome XX ID MYB67.DAP:M0495:AthalianaCistrome XX NA MYB67.DAP XX DE MYB67.DAP XX OS Arabidopsis thaliana XX BF 12479; XX P0 A C G T 01 164 90 182 163 d 02 156 119 152 172 d 03 193 80 135 191 w 04 168 83 199 149 r 05 170 96 155 178 d 06 170 77 177 175 d 07 172 93 184 150 d 08 161 85 136 217 w 09 221 61 165 152 d 10 215 48 203 133 r 11 115 147 70 267 t 12 60 0 532 7 G 13 1 0 240 358 k 14 0 0 0 599 T 15 380 0 25 194 w 16 0 0 599 0 G 17 2 0 542 55 G 18 0 0 0 599 T 19 266 0 329 4 r 20 143 119 288 49 g 21 242 71 226 60 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB67.DAP:M0495:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATY13.DAP/M0496/AthalianaCistrome XX ID ATY13.DAP:M0496:AthalianaCistrome XX NA ATY13.DAP XX DE ATY13.DAP XX OS Arabidopsis thaliana XX BF 10125; XX P0 A C G T 01 103 299 26 164 y 02 455 67 12 58 A 03 331 169 14 78 m 04 0 446 6 140 C 05 98 145 18 331 t 06 288 179 45 80 m 07 63 478 0 51 C 08 16 453 0 123 C 09 592 0 0 0 A 10 436 153 2 1 M 11 0 592 0 0 C 12 118 221 17 236 y 13 450 27 95 20 A 14 171 312 11 98 m 15 156 260 0 176 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATY13.DAP:M0496:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB58.ampDAP/M0497/AthalianaCistrome XX ID MYB58.ampDAP:M0497:AthalianaCistrome XX NA MYB58.ampDAP XX DE MYB58.ampDAP XX OS Arabidopsis thaliana XX BF 17709; XX P0 A C G T 01 186 72 186 156 d 02 179 88 152 181 d 03 151 91 153 205 d 04 164 93 186 157 d 05 180 85 127 208 w 06 170 73 169 188 d 07 171 18 260 151 d 08 128 50 196 226 k 09 134 0 462 4 G 10 2 0 426 172 K 11 0 0 0 600 T 12 176 1 1 422 W 13 1 0 599 0 G 14 0 0 538 62 G 15 0 0 0 600 T 16 147 3 443 7 G 17 240 40 230 90 r 18 302 53 178 67 r 19 185 130 176 109 r 20 141 189 125 145 c 21 207 73 114 206 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB58.ampDAP:M0497:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB44.DAP/M0498/AthalianaCistrome XX ID MYB44.DAP:M0498:AthalianaCistrome XX NA MYB44.DAP XX DE MYB44.DAP XX OS Arabidopsis thaliana XX BF 7516; XX P0 A C G T 01 141 48 137 152 d 02 161 48 59 210 w 03 148 15 155 160 d 04 203 20 98 157 w 05 21 360 3 94 C 06 141 142 163 32 v 07 6 3 469 0 G 08 1 1 79 397 T 09 12 5 1 460 T 10 313 0 32 133 w 11 207 22 31 218 w 12 133 9 97 239 w 13 196 18 53 211 w 14 30 326 3 119 C 15 140 172 126 40 v 16 0 0 471 7 G 17 0 0 101 377 T 18 7 9 0 462 T 19 229 10 128 111 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB44.DAP:M0498:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB61.ampDAP/M0499/AthalianaCistrome XX ID MYB61.ampDAP:M0499:AthalianaCistrome XX NA MYB61.ampDAP XX DE MYB61.ampDAP XX OS Arabidopsis thaliana XX BF 17705; XX P0 A C G T 01 140 186 96 170 y 02 101 175 66 250 y 03 87 257 97 151 y 04 0 313 4 275 y 05 592 0 0 0 A 06 121 471 0 0 C 07 0 592 0 0 C 08 253 41 0 298 w 09 592 0 0 0 A 10 182 409 0 1 M 11 0 509 0 83 C 12 270 55 109 158 w 13 130 193 72 197 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB61.ampDAP:M0499:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB83.ampDAP/M0500/AthalianaCistrome XX ID MYB83.ampDAP:M0500:AthalianaCistrome XX NA MYB83.ampDAP XX DE MYB83.ampDAP XX OS Arabidopsis thaliana XX BF 12484; XX P0 A C G T 01 144 96 144 212 t 02 134 99 237 126 g 03 162 90 119 225 w 04 199 64 137 196 w 05 175 88 232 101 r 06 165 130 69 232 w 07 86 0 470 40 G 08 0 0 401 195 k 09 0 6 1 589 T 10 168 2 19 407 W 11 1 0 595 0 G 12 0 2 448 146 G 13 0 0 0 596 T 14 130 5 456 5 G 15 150 80 267 99 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB83.ampDAP:M0500:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB62.ampDAP/M0501/AthalianaCistrome XX ID MYB62.ampDAP:M0501:AthalianaCistrome XX NA MYB62.ampDAP XX DE MYB62.ampDAP XX OS Arabidopsis thaliana XX BF 12476; XX P0 A C G T 01 87 150 57 306 y 02 125 190 100 185 y 03 57 80 83 380 t 04 353 3 242 2 r 05 3 597 0 0 C 06 0 600 0 0 C 07 82 2 2 514 T 08 600 0 0 0 A 09 581 19 0 0 A 10 19 455 0 126 C 11 96 76 10 418 T 12 113 102 43 342 t 13 158 93 54 295 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB62.ampDAP:M0501:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB3R1.ampDAP/M0503/AthalianaCistrome XX ID MYB3R1.ampDAP:M0503:AthalianaCistrome XX NA MYB3R1.ampDAP XX DE MYB3R1.ampDAP XX OS Arabidopsis thaliana XX BF 17758; XX P0 A C G T 01 250 69 85 164 w 02 283 36 33 216 w 03 178 80 54 256 w 04 206 93 132 137 a 05 49 59 48 412 T 06 227 0 208 133 r 07 392 1 138 37 A 08 36 532 0 0 C 09 0 568 0 0 C 10 0 0 568 0 G 11 0 0 0 568 T 12 0 0 0 568 T 13 274 0 254 40 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB3R1.ampDAP:M0503:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB101.ampDAP/M0506/AthalianaCistrome XX ID MYB101.ampDAP:M0506:AthalianaCistrome XX NA MYB101.ampDAP XX DE MYB101.ampDAP XX OS Arabidopsis thaliana XX BF 12449; XX P0 A C G T 01 332 64 81 123 a 02 311 86 74 129 a 03 162 247 42 149 m 04 136 188 54 222 y 05 210 116 249 25 r 06 58 35 2 505 T 07 600 0 0 0 A 08 600 0 0 0 A 09 0 600 0 0 C 10 58 306 71 165 y 11 120 0 480 0 G 12 303 53 4 240 w 13 305 156 0 139 m 14 202 30 13 355 w 15 152 130 76 242 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB101.ampDAP:M0506:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB55.ampDAP/M0507/AthalianaCistrome XX ID MYB55.ampDAP:M0507:AthalianaCistrome XX NA MYB55.ampDAP XX DE MYB55.ampDAP XX OS Arabidopsis thaliana XX BF 8887; XX P0 A C G T 01 151 122 41 284 w 02 66 0 532 0 G 03 2 0 446 150 K 04 0 0 0 598 T 05 267 0 52 279 w 06 0 0 598 0 G 07 0 0 437 161 K 08 1 0 0 597 T 09 253 2 334 9 r 10 156 105 267 70 r 11 256 67 194 81 r 12 159 93 178 168 d 13 163 136 112 187 w 14 183 80 138 197 w 15 186 66 173 173 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB55.ampDAP:M0507:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB65.ampDAP/M0508/AthalianaCistrome XX ID MYB65.ampDAP:M0508:AthalianaCistrome XX NA MYB65.ampDAP XX DE MYB65.ampDAP XX OS Arabidopsis thaliana XX BF 12478; XX P0 A C G T 01 233 132 144 91 a 02 47 36 0 517 T 03 600 0 0 0 A 04 600 0 0 0 A 05 0 600 0 0 C 06 74 363 74 89 c 07 82 0 518 0 G 08 211 114 0 275 w 09 359 188 0 53 m 10 362 40 31 167 w 11 202 220 67 111 m 12 171 171 79 179 h 13 249 66 160 125 r 14 163 124 71 242 w 15 255 112 87 146 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB65.ampDAP:M0508:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB119.ampDAP/M0510/AthalianaCistrome XX ID MYB119.ampDAP:M0510:AthalianaCistrome XX NA MYB119.ampDAP XX DE MYB119.ampDAP XX OS Arabidopsis thaliana XX BF 12455; XX P0 A C G T 01 289 49 85 175 w 02 328 33 39 198 w 03 281 22 30 265 w 04 192 84 25 297 w 05 74 197 8 319 y 06 23 0 575 0 G 07 0 0 0 598 T 08 598 0 0 0 A 09 598 0 0 0 A 10 0 598 0 0 C 11 0 88 500 10 G 12 0 14 403 181 k 13 216 106 0 276 w 14 104 182 0 312 y 15 313 47 167 71 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB119.ampDAP:M0510:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB116.ampDAP/M0511/AthalianaCistrome XX ID MYB116.ampDAP:M0511:AthalianaCistrome XX NA MYB116.ampDAP XX DE MYB116.ampDAP XX OS Arabidopsis thaliana XX BF 12453; XX P0 A C G T 01 308 51 108 119 a 02 361 37 101 87 a 03 442 3 63 78 A 04 53 0 533 0 G 05 0 0 13 573 T 06 0 0 0 586 T 07 576 2 0 8 A 08 0 0 586 0 G 09 0 0 586 0 G 10 0 429 1 156 Y 11 401 63 90 32 A 12 161 128 181 116 r 13 267 70 157 92 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB116.ampDAP:M0511:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MS188.ampDAP/M0512/AthalianaCistrome XX ID MS188.ampDAP:M0512:AthalianaCistrome XX NA MS188.ampDAP XX DE MS188.ampDAP XX OS Arabidopsis thaliana XX BF 12447; XX P0 A C G T 01 228 95 149 119 r 02 268 77 119 127 a 03 308 85 105 93 a 04 364 16 66 145 a 05 465 2 26 98 A 06 286 6 286 13 r 07 0 0 255 336 k 08 0 0 0 591 T 09 540 3 1 47 A 10 0 0 591 0 G 11 1 0 502 88 G 12 0 0 0 591 T 13 255 7 303 26 r 14 253 54 224 60 r 15 283 45 225 38 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MS188.ampDAP:M0512:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB88.DAP/M0513/AthalianaCistrome XX ID MYB88.DAP:M0513:AthalianaCistrome XX NA MYB88.DAP XX DE MYB88.DAP XX OS Arabidopsis thaliana XX BF 17731; XX P0 A C G T 01 177 151 101 165 h 02 161 179 113 141 m 03 122 217 87 168 y 04 214 174 59 147 m 05 82 304 95 113 c 06 472 111 11 0 A 07 21 545 28 0 C 08 0 0 594 0 G 09 0 594 0 0 C 10 0 0 301 293 k 11 0 588 0 6 C 12 5 482 5 102 C 13 160 61 122 251 w 14 100 296 70 128 c 15 108 276 61 149 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB88.DAP:M0513:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB107.DAP/M0514/AthalianaCistrome XX ID MYB107.DAP:M0514:AthalianaCistrome XX NA MYB107.DAP XX DE MYB107.DAP XX OS Arabidopsis thaliana XX BF 12451; XX P0 A C G T 01 230 38 135 197 w 02 250 35 89 226 w 03 202 0 375 23 r 04 1 0 349 250 k 05 0 0 0 600 T 06 342 5 42 211 w 07 0 0 600 0 G 08 11 2 468 119 G 09 0 2 0 598 T 10 133 67 372 28 g 11 373 31 153 43 r 12 284 118 154 44 r 13 125 320 96 59 c 14 194 139 63 204 w 15 352 18 87 143 a 16 226 134 72 168 w 17 140 178 75 207 y 18 128 104 138 230 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB107.DAP:M0514:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MS188.DAP/M0515/AthalianaCistrome XX ID MS188.DAP:M0515:AthalianaCistrome XX NA MS188.DAP XX DE MS188.DAP XX OS Arabidopsis thaliana XX BF 12447; XX P0 A C G T 01 242 83 117 153 w 02 268 100 92 135 a 03 287 17 116 175 w 04 421 4 41 129 A 05 309 5 233 48 r 06 1 0 221 373 k 07 0 0 0 595 T 08 461 3 5 126 A 09 0 0 595 0 G 10 0 0 459 136 G 11 1 0 0 594 T 12 239 39 280 37 r 13 320 38 177 60 r 14 333 81 144 37 a 15 221 189 91 94 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MS188.DAP:M0515:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB88.ampDAP/M0516/AthalianaCistrome XX ID MYB88.ampDAP:M0516:AthalianaCistrome XX NA MYB88.ampDAP XX DE MYB88.ampDAP XX OS Arabidopsis thaliana XX BF 17731; XX P0 A C G T 01 177 87 182 131 r 02 162 98 204 113 r 03 280 66 87 144 a 04 122 16 430 9 G 05 3 3 571 0 G 06 459 118 0 0 A 07 0 0 577 0 G 08 0 577 0 0 C 09 0 95 454 28 G 10 34 30 87 426 T 11 153 103 168 153 d 12 140 87 119 231 t 13 151 99 179 148 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB88.ampDAP:M0516:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB49.DAP/M0518/AthalianaCistrome XX ID MYB49.DAP:M0518:AthalianaCistrome XX NA MYB49.DAP XX DE MYB49.DAP XX OS Arabidopsis thaliana XX BF 12469; XX P0 A C G T 01 146 124 18 310 t 02 213 71 88 226 w 03 72 81 282 163 k 04 46 165 98 289 y 05 39 152 33 374 y 06 23 323 61 191 y 07 588 0 9 1 A 08 79 510 6 3 C 09 0 598 0 0 C 10 170 8 3 417 W 11 598 0 0 0 A 12 292 299 0 7 m 13 60 313 3 222 y 14 187 31 0 380 w 15 190 94 37 277 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB49.DAP:M0518:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB107.ampDAP/M0520/AthalianaCistrome XX ID MYB107.ampDAP:M0520:AthalianaCistrome XX NA MYB107.ampDAP XX DE MYB107.ampDAP XX OS Arabidopsis thaliana XX BF 12451; XX P0 A C G T 01 193 88 18 296 w 02 191 87 135 182 w 03 68 113 279 135 g 04 40 178 80 297 y 05 45 169 39 342 y 06 23 363 51 158 y 07 595 0 0 0 A 08 101 486 5 3 C 09 0 595 0 0 C 10 215 35 3 342 w 11 594 0 1 0 A 12 243 352 0 0 m 13 10 407 0 178 Y 14 214 104 39 238 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB107.ampDAP:M0520:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB27.ampDAP/M0521/AthalianaCistrome XX ID MYB27.ampDAP:M0521:AthalianaCistrome XX NA MYB27.ampDAP XX DE MYB27.ampDAP XX OS Arabidopsis thaliana XX BF 12460; XX P0 A C G T 01 137 114 90 255 t 02 81 155 50 310 y 03 145 102 69 280 t 04 8 29 48 511 T 05 589 0 7 0 A 06 0 596 0 0 C 07 0 596 0 0 C 08 1 1 0 594 T 09 596 0 0 0 A 10 596 0 0 0 A 11 1 193 0 402 y 12 100 0 0 496 T 13 122 6 0 468 T 14 126 72 14 384 t 15 97 87 63 349 t 16 131 115 89 261 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB27.ampDAP:M0521:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB56.ampDAP/M0522/AthalianaCistrome XX ID MYB56.ampDAP:M0522:AthalianaCistrome XX NA MYB56.ampDAP XX DE MYB56.ampDAP XX OS Arabidopsis thaliana XX BF 12471; XX P0 A C G T 01 181 73 79 264 w 02 232 102 81 182 w 03 231 90 133 143 a 04 313 94 24 166 w 05 0 0 0 597 T 06 597 0 0 0 A 07 597 0 0 0 A 08 0 597 0 0 C 09 23 43 470 61 G 10 100 0 497 0 G 11 188 45 2 362 w 12 251 118 12 216 w 13 210 47 23 317 w 14 123 165 53 256 y 15 160 71 134 232 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB56.ampDAP:M0522:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB58.DAP/M0523/AthalianaCistrome XX ID MYB58.DAP:M0523:AthalianaCistrome XX NA MYB58.DAP XX DE MYB58.DAP XX OS Arabidopsis thaliana XX BF 17709; XX P0 A C G T 01 181 66 169 184 d 02 190 27 241 142 r 03 133 48 179 240 k 04 144 0 452 4 G 05 2 0 414 184 K 06 0 1 0 599 T 07 184 2 1 413 W 08 1 0 599 0 G 09 0 0 529 71 G 10 0 1 1 598 T 11 167 4 428 1 R 12 262 44 219 75 r 13 344 51 147 58 a 14 198 140 147 115 a 15 144 191 120 145 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB58.DAP:M0523:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB118.ampDAP/M0524/AthalianaCistrome XX ID MYB118.ampDAP:M0524:AthalianaCistrome XX NA MYB118.ampDAP XX DE MYB118.ampDAP XX OS Arabidopsis thaliana XX BF 12454; XX P0 A C G T 01 294 51 84 168 w 02 287 54 51 205 w 03 274 25 38 260 w 04 236 58 39 264 w 05 93 182 7 315 y 06 15 0 582 0 G 07 0 0 0 597 T 08 597 0 0 0 A 09 597 0 0 0 A 10 0 597 0 0 C 11 0 124 460 13 G 12 0 43 407 147 G 13 157 108 0 332 w 14 53 236 0 308 y 15 339 32 166 60 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB118.ampDAP:M0524:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB93.ampDAP/M0525/AthalianaCistrome XX ID MYB93.ampDAP:M0525:AthalianaCistrome XX NA MYB93.ampDAP XX DE MYB93.ampDAP XX OS Arabidopsis thaliana XX BF 17714; XX P0 A C G T 01 179 109 163 128 r 02 153 130 104 192 w 03 224 94 27 234 w 04 198 87 142 152 w 05 67 156 204 152 b 06 50 185 52 292 y 07 74 185 37 283 y 08 5 388 31 155 y 09 579 0 0 0 A 10 145 433 1 0 M 11 0 579 0 0 C 12 187 57 0 335 w 13 579 0 0 0 A 14 204 375 0 0 m 15 1 402 0 176 Y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB93.ampDAP:M0525:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB99.ampDAP/M0526/AthalianaCistrome XX ID MYB99.ampDAP:M0526:AthalianaCistrome XX NA MYB99.ampDAP XX DE MYB99.ampDAP XX OS Arabidopsis thaliana XX BF 12489; XX P0 A C G T 01 54 225 43 268 y 02 83 201 60 246 y 03 35 351 16 188 y 04 590 0 0 0 A 05 66 524 0 0 C 06 0 590 0 0 C 07 102 8 0 480 T 08 590 0 0 0 A 09 277 313 0 0 m 10 13 349 0 228 y 11 123 145 38 284 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB99.ampDAP:M0526:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB49.ampDAP/M0527/AthalianaCistrome XX ID MYB49.ampDAP:M0527:AthalianaCistrome XX NA MYB49.ampDAP XX DE MYB49.ampDAP XX OS Arabidopsis thaliana XX BF 12469; XX P0 A C G T 01 269 78 99 142 a 02 272 29 92 195 w 03 362 5 42 179 w 04 205 5 310 68 r 05 11 0 252 325 k 06 0 0 0 588 T 07 448 1 0 139 A 08 0 0 588 0 G 09 1 2 528 57 G 10 1 0 0 587 T 11 210 34 328 16 r 12 350 36 140 62 a 13 306 76 156 50 r 14 225 167 96 100 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB49.ampDAP:M0527:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB93.DAP/M0528/AthalianaCistrome XX ID MYB93.DAP:M0528:AthalianaCistrome XX NA MYB93.DAP XX DE MYB93.DAP XX OS Arabidopsis thaliana XX BF 17714; XX P0 A C G T 01 139 47 171 239 k 02 156 68 148 224 w 03 109 56 244 187 k 04 144 36 208 208 k 05 147 69 153 227 k 06 185 24 177 210 d 07 220 25 197 154 d 08 233 28 125 210 w 09 202 0 360 34 r 10 0 0 349 247 k 11 1 1 0 594 T 12 306 3 54 233 w 13 0 0 596 0 G 14 13 5 419 159 K 15 4 5 0 587 T 16 155 48 357 36 r 17 315 49 159 73 r 18 322 74 157 43 r 19 164 246 105 81 m 20 178 174 73 171 h 21 265 40 113 178 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB93.DAP:M0528:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB61.DAP/M0531/AthalianaCistrome XX ID MYB61.DAP:M0531:AthalianaCistrome XX NA MYB61.DAP XX DE MYB61.DAP XX OS Arabidopsis thaliana XX BF 17705; XX P0 A C G T 01 92 211 49 243 y 02 100 247 76 172 y 03 0 359 0 236 y 04 593 1 0 1 A 05 203 392 0 0 m 06 0 595 0 0 C 07 225 132 0 238 w 08 590 0 5 0 A 09 117 478 0 0 C 10 7 514 0 74 C 11 285 56 125 129 a 12 151 236 75 133 m 13 185 210 54 146 m 14 189 153 94 159 h 15 151 231 58 155 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB61.DAP:M0531:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB74.ampDAP/M0532/AthalianaCistrome XX ID MYB74.ampDAP:M0532:AthalianaCistrome XX NA MYB74.ampDAP XX DE MYB74.ampDAP XX OS Arabidopsis thaliana XX BF 12482; XX P0 A C G T 01 221 68 136 161 w 02 222 39 135 190 w 03 309 6 54 217 w 04 163 0 420 3 R 05 0 0 323 263 k 06 0 0 0 586 T 07 487 0 0 99 A 08 0 0 586 0 G 09 1 1 542 42 G 10 0 0 0 586 T 11 225 17 333 11 r 12 281 46 187 72 r 13 314 55 177 40 r 14 213 129 128 116 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB74.ampDAP:M0532:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB13.DAP/M0534/AthalianaCistrome XX ID MYB13.DAP:M0534:AthalianaCistrome XX NA MYB13.DAP XX DE MYB13.DAP XX OS Arabidopsis thaliana XX BF 17717; XX P0 A C G T 01 177 70 196 152 d 02 177 94 139 185 w 03 187 66 165 177 d 04 190 42 191 172 d 05 92 68 157 278 k 06 96 0 499 0 G 07 1 0 475 119 G 08 0 0 0 595 T 09 257 0 6 332 w 10 0 0 595 0 G 11 0 0 546 49 G 12 0 0 4 591 T 13 119 7 467 2 G 14 261 30 261 43 r 15 260 69 185 81 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB13.DAP:M0534:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB63.DAP/M0536/AthalianaCistrome XX ID MYB63.DAP:M0536:AthalianaCistrome XX NA MYB63.DAP XX DE MYB63.DAP XX OS Arabidopsis thaliana XX BF 17706; XX P0 A C G T 01 124 236 77 156 y 02 186 138 110 159 w 03 190 167 92 144 m 04 145 204 50 194 y 05 181 129 86 197 w 06 174 158 97 164 h 07 120 230 74 169 y 08 95 198 60 240 y 09 43 279 21 250 y 10 0 477 3 113 C 11 589 4 0 0 A 12 45 546 2 0 C 13 0 593 0 0 C 14 397 4 9 183 w 15 589 0 4 0 A 16 92 493 0 8 C 17 8 452 0 133 C 18 202 276 44 71 m 19 103 399 7 84 c 20 191 202 62 138 m 21 193 162 89 149 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB63.DAP:M0536:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATY13.ampDAP/M0537/AthalianaCistrome XX ID ATY13.ampDAP:M0537:AthalianaCistrome XX NA ATY13.ampDAP XX DE ATY13.ampDAP XX OS Arabidopsis thaliana XX BF 10125; XX P0 A C G T 01 101 307 24 132 c 02 401 73 27 63 A 03 282 185 18 79 m 04 0 426 9 129 C 05 123 147 32 262 y 06 280 157 49 78 m 07 57 447 0 60 C 08 12 480 2 70 C 09 564 0 0 0 A 10 421 136 2 5 A 11 0 564 0 0 C 12 104 221 19 220 y 13 409 23 86 46 A 14 141 305 9 109 m 15 113 273 8 170 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATY13.ampDAP:M0537:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB13.ampDAP/M0538/AthalianaCistrome XX ID MYB13.ampDAP:M0538:AthalianaCistrome XX NA MYB13.ampDAP XX DE MYB13.ampDAP XX OS Arabidopsis thaliana XX BF 17717; XX P0 A C G T 01 72 201 77 238 y 02 53 285 21 229 y 03 5 456 0 127 C 04 588 0 0 0 A 05 31 556 1 0 C 06 0 588 0 0 C 07 339 3 0 246 w 08 587 0 0 1 A 09 125 463 0 0 C 10 0 506 0 82 C 11 297 151 53 87 m 12 161 196 39 192 h 13 210 145 71 162 w 14 180 143 99 166 w 15 166 162 85 175 h 16 180 184 62 162 h 17 183 155 82 168 h 18 152 174 80 182 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB13.ampDAP:M0538:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB30.ampDAP/M0539/AthalianaCistrome XX ID MYB30.ampDAP:M0539:AthalianaCistrome XX NA MYB30.ampDAP XX DE MYB30.ampDAP XX OS Arabidopsis thaliana XX BF 17743; XX P0 A C G T 01 181 206 60 145 m 02 371 90 34 97 a 03 255 189 34 114 m 04 39 335 50 168 y 05 74 201 42 275 y 06 217 222 69 84 m 07 38 445 13 96 C 08 3 494 0 95 C 09 592 0 0 0 A 10 467 124 0 1 A 11 0 592 0 0 C 12 57 249 2 284 y 13 503 0 84 5 A 14 172 336 20 64 m 15 95 331 0 166 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB30.ampDAP:M0539:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BOS1.DAP/M0540/AthalianaCistrome XX ID BOS1.DAP:M0540:AthalianaCistrome XX NA BOS1.DAP XX DE BOS1.DAP XX OS Arabidopsis thaliana XX BF 12376; XX P0 A C G T 01 127 69 94 302 t 02 155 101 114 222 w 03 169 61 258 104 r 04 145 81 219 147 g 05 161 75 120 236 w 06 222 76 76 218 w 07 294 77 82 139 a 08 395 2 114 81 a 09 186 0 382 24 r 10 0 0 11 581 T 11 0 0 0 592 T 12 377 60 4 151 w 13 0 0 592 0 G 14 0 0 592 0 G 15 2 227 0 363 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BOS1.DAP:M0540:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB121.DAP/M0541/AthalianaCistrome XX ID MYB121.DAP:M0541:AthalianaCistrome XX NA MYB121.DAP XX DE MYB121.DAP XX OS Arabidopsis thaliana XX BF 12456; XX P0 A C G T 01 239 58 82 194 w 02 265 50 88 170 w 03 301 19 96 157 w 04 137 0 412 24 G 05 4 0 148 421 K 06 0 0 0 573 T 07 472 47 0 54 A 08 0 0 573 0 G 09 0 0 571 2 G 10 0 44 0 529 T 11 340 62 58 113 a 12 156 143 97 177 w 13 276 59 163 75 r 14 230 74 129 140 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB121.DAP:M0541:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB96.ampDAP/M0542/AthalianaCistrome XX ID MYB96.ampDAP:M0542:AthalianaCistrome XX NA MYB96.ampDAP XX DE MYB96.ampDAP XX OS Arabidopsis thaliana XX BF 12488; XX P0 A C G T 01 164 177 67 178 h 02 187 178 71 150 h 03 193 207 54 132 m 04 304 110 57 115 a 05 180 247 34 125 m 06 61 238 66 221 y 07 106 193 45 242 y 08 235 228 35 88 m 09 57 398 26 105 c 10 4 520 1 61 C 11 586 0 0 0 A 12 485 101 0 0 A 13 0 582 4 0 C 14 54 290 12 230 y 15 473 1 53 59 A 16 144 316 12 114 c 17 76 378 1 131 c 18 197 56 25 308 w 19 121 154 76 235 y 20 127 223 55 181 y 21 138 95 106 247 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB96.ampDAP:M0542:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB99.DAP/M0544/AthalianaCistrome XX ID MYB99.DAP:M0544:AthalianaCistrome XX NA MYB99.DAP XX DE MYB99.DAP XX OS Arabidopsis thaliana XX BF 12489; XX P0 A C G T 01 147 172 92 174 h 02 61 250 40 234 y 03 79 209 44 253 y 04 57 360 7 161 y 05 585 0 0 0 A 06 50 535 0 0 C 07 0 585 0 0 C 08 185 9 0 391 w 09 585 0 0 0 A 10 246 337 0 2 m 11 15 355 0 215 y 12 128 183 45 229 y 13 149 213 48 175 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB99.DAP:M0544:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB10.DAP/M0546/AthalianaCistrome XX ID MYB10.DAP:M0546:AthalianaCistrome XX NA MYB10.DAP XX DE MYB10.DAP XX OS Arabidopsis thaliana XX BF 17745; XX P0 A C G T 01 148 58 168 211 d 02 187 79 154 165 d 03 160 71 147 207 d 04 170 59 144 212 w 05 148 21 215 201 d 06 151 19 169 246 d 07 115 1 455 14 G 08 7 0 409 169 K 09 1 0 0 584 T 10 410 1 0 174 W 11 0 0 585 0 G 12 0 2 576 7 G 13 0 2 0 583 T 14 166 12 404 3 R 15 260 37 245 43 r 16 261 49 213 62 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB10.DAP:M0546:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB96.DAP/M0547/AthalianaCistrome XX ID MYB96.DAP:M0547:AthalianaCistrome XX NA MYB96.DAP XX DE MYB96.DAP XX OS Arabidopsis thaliana XX BF 12488; XX P0 A C G T 01 188 64 145 199 w 02 199 52 170 175 d 03 250 35 143 168 w 04 181 13 251 151 d 05 100 21 290 185 k 06 36 97 47 416 T 07 245 31 176 144 r 08 7 0 577 12 G 09 13 4 217 362 k 10 14 6 0 576 T 11 125 0 446 25 G 12 54 10 490 42 G 13 76 80 109 331 t 14 276 35 177 108 r 15 50 8 538 0 G 16 50 12 142 392 t 17 19 10 41 526 T 18 167 28 334 67 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB96.DAP:M0547:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB92.ampDAP/M0548/AthalianaCistrome XX ID MYB92.ampDAP:M0548:AthalianaCistrome XX NA MYB92.ampDAP XX DE MYB92.ampDAP XX OS Arabidopsis thaliana XX BF 12486; XX P0 A C G T 01 214 142 77 158 w 02 231 133 84 143 a 03 177 131 138 145 a 04 170 105 99 217 w 05 243 75 55 218 w 06 174 97 157 163 d 07 106 137 187 161 k 08 54 175 61 301 y 09 76 179 49 287 y 10 23 344 26 198 y 11 591 0 0 0 A 12 50 541 0 0 C 13 0 591 0 0 C 14 220 13 0 358 w 15 591 0 0 0 A 16 235 356 0 0 m 17 5 396 0 190 y 18 225 114 36 216 w 19 167 154 47 223 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB92.ampDAP:M0548:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB30.DAP/M0549/AthalianaCistrome XX ID MYB30.DAP:M0549:AthalianaCistrome XX NA MYB30.DAP XX DE MYB30.DAP XX OS Arabidopsis thaliana XX BF 17743; XX P0 A C G T 01 91 182 116 205 y 02 84 212 50 248 y 03 155 261 40 138 m 04 107 319 40 128 c 05 7 501 0 86 C 06 584 9 0 1 A 07 523 61 2 8 A 08 0 594 0 0 C 09 37 312 13 232 y 10 454 7 103 30 A 11 99 442 0 53 C 12 51 405 0 138 C 13 366 47 34 147 a 14 239 228 27 100 m 15 96 364 27 107 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB30.DAP:M0549:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB17.ampDAP/M0550/AthalianaCistrome XX ID MYB17.ampDAP:M0550:AthalianaCistrome XX NA MYB17.ampDAP XX DE MYB17.ampDAP XX OS Arabidopsis thaliana XX BF 17739; XX P0 A C G T 01 228 56 120 167 w 02 203 58 130 180 w 03 150 55 192 174 d 04 157 33 141 240 w 05 180 13 67 311 w 06 110 0 460 1 G 07 1 3 494 73 G 08 0 0 0 571 T 09 410 0 23 138 A 10 0 0 571 0 G 11 0 0 497 74 G 12 2 0 0 569 T 13 159 6 348 58 r 14 249 35 210 77 r 15 236 44 251 40 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB17.ampDAP:M0550:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB105.ampDAP/M0551/AthalianaCistrome XX ID MYB105.ampDAP:M0551:AthalianaCistrome XX NA MYB105.ampDAP XX DE MYB105.ampDAP XX OS Arabidopsis thaliana XX BF 12450; XX P0 A C G T 01 201 153 85 147 h 02 122 126 216 122 g 03 204 30 126 226 w 04 145 54 56 331 t 05 256 95 49 186 w 06 234 58 117 177 w 07 242 86 52 206 w 08 0 12 0 574 T 09 586 0 0 0 A 10 586 0 0 0 A 11 0 586 0 0 C 12 18 60 438 70 G 13 89 0 497 0 G 14 151 50 0 385 w 15 245 81 26 234 w 16 208 42 22 314 w 17 111 158 57 260 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB105.ampDAP:M0551:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB81.ampDAP/M0553/AthalianaCistrome XX ID MYB81.ampDAP:M0553:AthalianaCistrome XX NA MYB81.ampDAP XX DE MYB81.ampDAP XX OS Arabidopsis thaliana XX BF 12483; XX P0 A C G T 01 250 69 115 166 w 02 147 217 48 188 y 03 122 202 4 272 y 04 131 152 215 102 s 05 64 129 1 406 t 06 591 0 0 9 A 07 600 0 0 0 A 08 1 599 0 0 C 09 75 294 148 83 c 10 64 2 534 0 G 11 135 104 27 334 t 12 248 85 1 266 w 13 182 33 59 326 w 14 121 176 67 236 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB81.ampDAP:M0553:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB44.ampDAP/M0554/AthalianaCistrome XX ID MYB44.ampDAP:M0554:AthalianaCistrome XX NA MYB44.ampDAP XX DE MYB44.ampDAP XX OS Arabidopsis thaliana XX BF 7516; XX P0 A C G T 01 239 108 56 180 w 02 237 68 84 194 w 03 43 77 0 463 T 04 583 0 0 0 A 05 583 0 0 0 A 06 0 583 0 0 C 07 2 323 142 116 c 08 0 0 583 0 G 09 158 43 5 377 w 10 312 118 2 151 w 11 332 12 14 225 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB44.ampDAP:M0554:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB10.ampDAP/M0555/AthalianaCistrome XX ID MYB10.ampDAP:M0555:AthalianaCistrome XX NA MYB10.ampDAP XX DE MYB10.ampDAP XX OS Arabidopsis thaliana XX BF 17745; XX P0 A C G T 01 142 147 94 202 y 02 58 183 68 276 y 03 44 266 19 256 y 04 10 414 11 150 Y 05 583 0 1 1 A 06 5 580 0 0 C 07 0 585 0 0 C 08 205 2 0 378 w 09 585 0 0 0 A 10 195 388 2 0 m 11 8 482 1 94 C 12 267 97 30 191 w 13 207 138 33 207 w 14 192 125 64 204 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB10.ampDAP:M0555:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB94.DAP/M0556/AthalianaCistrome XX ID MYB94.DAP:M0556:AthalianaCistrome XX NA MYB94.DAP XX DE MYB94.DAP XX OS Arabidopsis thaliana XX BF 11457; XX P0 A C G T 01 165 78 149 175 d 02 190 78 146 153 d 03 180 58 205 124 r 04 215 49 151 152 d 05 309 25 46 187 w 06 208 0 330 29 r 07 13 0 483 71 G 08 4 10 0 553 T 09 285 1 257 24 r 10 0 0 567 0 G 11 0 0 120 447 T 12 0 0 1 566 T 13 39 0 528 0 G 14 151 31 324 61 r 15 143 60 258 106 r 16 263 62 171 71 r 17 194 93 171 109 r 18 196 56 148 167 d 19 160 60 120 227 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB94.DAP:M0556:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB39.DAP/M0557/AthalianaCistrome XX ID MYB39.DAP:M0557:AthalianaCistrome XX NA MYB39.DAP XX DE MYB39.DAP XX OS Arabidopsis thaliana XX BF 12462; XX P0 A C G T 01 255 54 128 148 w 02 301 32 121 131 a 03 391 0 46 148 w 04 283 0 275 27 r 05 4 0 257 324 k 06 0 0 0 585 T 07 486 0 0 99 A 08 0 0 585 0 G 09 3 0 501 81 G 10 0 4 0 581 T 11 163 10 392 20 r 12 297 43 206 39 r 13 320 55 181 29 r 14 279 115 99 92 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB39.DAP:M0557:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB39.ampDAP/M0559/AthalianaCistrome XX ID MYB39.ampDAP:M0559:AthalianaCistrome XX NA MYB39.ampDAP XX DE MYB39.ampDAP XX OS Arabidopsis thaliana XX BF 12462; XX P0 A C G T 01 154 40 149 224 d 02 125 81 110 251 t 03 190 47 137 193 w 04 186 60 155 166 d 05 116 66 187 198 k 06 177 64 118 208 w 07 199 66 136 166 w 08 227 46 156 138 r 09 264 35 107 161 w 10 348 7 64 148 w 11 229 0 294 44 r 12 1 2 260 304 k 13 0 0 0 567 T 14 395 3 5 164 W 15 0 0 567 0 G 16 7 1 483 76 G 17 0 0 0 567 T 18 172 20 319 56 r 19 287 40 174 66 r 20 265 54 176 72 r 21 191 143 100 133 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB39.ampDAP:M0559:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB51.DAP/M0560/AthalianaCistrome XX ID MYB51.DAP:M0560:AthalianaCistrome XX NA MYB51.DAP XX DE MYB51.DAP XX OS Arabidopsis thaliana XX BF 12470; XX P0 A C G T 01 148 165 73 167 h 02 160 110 59 224 w 03 152 157 72 172 h 04 145 178 67 163 h 05 210 108 65 170 w 06 197 99 96 161 w 07 189 134 58 172 w 08 211 108 82 152 w 09 145 147 89 172 h 10 158 125 86 184 w 11 46 206 53 248 y 12 55 213 50 235 y 13 58 277 8 210 y 14 552 1 0 0 A 15 0 553 0 0 C 16 0 553 0 0 C 17 251 1 2 299 w 18 552 0 1 0 A 19 113 427 8 5 C 20 46 326 11 170 y 21 232 50 13 258 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB51.DAP:M0560:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB4.DAP/M0561/AthalianaCistrome XX ID MYB4.DAP:M0561:AthalianaCistrome XX NA MYB4.DAP XX DE MYB4.DAP XX OS Arabidopsis thaliana XX BF 11461; XX P0 A C G T 01 208 134 64 166 w 02 217 90 60 205 w 03 196 92 85 199 w 04 205 60 111 196 w 05 269 33 83 187 w 06 186 10 270 106 r 07 20 10 259 283 k 08 0 2 0 570 T 09 274 2 0 296 w 10 0 0 572 0 G 11 0 0 551 21 G 12 0 0 0 572 T 13 292 16 237 27 r 14 252 52 204 64 r 15 217 85 169 101 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB4.DAP:M0561:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATY19.DAP/M0562/AthalianaCistrome XX ID ATY19.DAP:M0562:AthalianaCistrome XX NA ATY19.DAP XX DE ATY19.DAP XX OS Arabidopsis thaliana XX BF 9995; XX P0 A C G T 01 110 221 80 123 c 02 158 128 67 181 w 03 101 182 88 163 y 04 118 223 61 132 c 05 223 107 95 109 a 06 207 127 70 130 a 07 186 156 41 151 h 08 213 102 58 161 w 09 124 155 81 174 y 10 150 182 43 159 h 11 94 175 61 204 y 12 44 241 32 217 y 13 79 378 1 76 C 14 526 5 1 2 A 15 40 482 7 5 C 16 3 531 0 0 C 17 381 0 0 153 W 18 500 20 2 12 A 19 121 387 16 10 C 20 55 350 16 113 c 21 205 155 55 119 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATY19.DAP:M0562:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB60.DAP/M0563/AthalianaCistrome XX ID MYB60.DAP:M0563:AthalianaCistrome XX NA MYB60.DAP XX DE MYB60.DAP XX OS Arabidopsis thaliana XX BF 17718; XX P0 A C G T 01 123 139 49 131 h 02 145 84 67 146 w 03 111 80 75 176 w 04 64 160 38 180 y 05 49 162 40 191 y 06 38 227 23 154 y 07 0 431 0 11 C 08 439 2 1 0 A 09 385 56 0 1 A 10 0 442 0 0 C 11 29 234 0 179 y 12 431 0 11 0 A 13 57 369 0 16 C 14 56 227 0 159 y 15 108 38 29 267 t 16 97 132 32 181 y 17 109 126 45 162 y 18 136 82 84 140 w 19 83 150 59 150 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB60.DAP:M0563:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB55.DAP/M0564/AthalianaCistrome XX ID MYB55.DAP:M0564:AthalianaCistrome XX NA MYB55.DAP XX DE MYB55.DAP XX OS Arabidopsis thaliana XX BF 8887; XX P0 A C G T 01 76 178 59 116 y 02 40 219 40 130 y 03 102 128 56 143 y 04 49 265 16 99 c 05 398 30 0 1 A 06 235 188 2 4 m 07 0 429 0 0 C 08 139 189 1 100 m 09 406 0 21 2 A 10 0 428 0 1 C 11 6 423 0 0 C 12 279 6 77 67 a 13 91 192 42 104 c 14 114 217 32 66 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB55.DAP:M0564:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB83.DAP/M0565/AthalianaCistrome XX ID MYB83.DAP:M0565:AthalianaCistrome XX NA MYB83.DAP XX DE MYB83.DAP XX OS Arabidopsis thaliana XX BF 12484; XX P0 A C G T 01 80 28 236 79 g 02 102 81 107 133 k 03 86 7 207 123 k 04 0 6 339 78 G 05 0 22 53 348 T 06 55 3 6 359 T 07 3 0 420 0 G 08 0 4 321 98 G 09 0 0 0 423 T 10 32 2 343 46 G 11 112 41 215 55 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB83.DAP:M0565:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB116.DAP/M0568/AthalianaCistrome XX ID MYB116.DAP:M0568:AthalianaCistrome XX NA MYB116.DAP XX DE MYB116.DAP XX OS Arabidopsis thaliana XX BF 12453; XX P0 A C G T 01 106 36 40 58 a 02 125 36 40 39 a 03 80 70 41 49 m 04 129 19 33 59 a 05 114 47 31 48 a 06 133 12 26 69 w 07 181 7 22 30 A 08 53 30 152 5 g 09 0 0 0 240 T 10 0 0 0 240 T 11 239 0 0 1 A 12 0 0 240 0 G 13 1 0 238 1 G 14 3 140 6 91 y 15 110 33 36 61 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB116.DAP:M0568:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB40.DAP/M0569/AthalianaCistrome XX ID MYB40.DAP:M0569:AthalianaCistrome XX NA MYB40.DAP XX DE MYB40.DAP XX OS Arabidopsis thaliana XX BF 17762; XX P0 A C G T 01 10 83 30 114 y 02 4 73 9 151 y 03 6 102 0 129 y 04 236 0 1 0 A 05 2 235 0 0 C 06 0 236 1 0 C 07 96 0 0 141 w 08 236 1 0 0 A 09 95 140 0 2 m 10 8 137 0 92 y 11 88 35 21 93 w 12 57 54 15 111 t 13 58 62 23 94 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB40.DAP:M0569:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB92.DAP/M0570/AthalianaCistrome XX ID MYB92.DAP:M0570:AthalianaCistrome XX NA MYB92.DAP XX DE MYB92.DAP XX OS Arabidopsis thaliana XX BF 12486; XX P0 A C G T 01 38 12 120 17 g 02 0 0 56 131 K 03 0 0 0 187 T 04 165 0 0 22 A 05 0 0 187 0 G 06 0 0 187 0 G 07 0 0 6 181 T 08 76 13 71 27 r 09 69 22 57 39 r 10 73 28 49 37 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB92.DAP:M0570:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB23.DAP/M0571/AthalianaCistrome XX ID MYB23.DAP:M0571:AthalianaCistrome XX NA MYB23.DAP XX DE MYB23.DAP XX OS Arabidopsis thaliana XX BF 12459; XX P0 A C G T 01 76 20 54 57 d 02 96 15 32 64 w 03 43 19 93 52 k 04 28 21 71 87 k 05 0 0 0 207 T 06 83 0 2 122 w 07 0 0 207 0 G 08 0 0 0 207 T 09 0 0 0 207 T 10 3 0 204 0 G 11 62 25 72 48 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB23.DAP:M0571:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB41.DAP/M0572/AthalianaCistrome XX ID MYB41.DAP:M0572:AthalianaCistrome XX NA MYB41.DAP XX DE MYB41.DAP XX OS Arabidopsis thaliana XX BF 17751; XX P0 A C G T 01 46 20 46 72 d 02 37 34 16 97 t 03 57 17 39 71 w 04 19 26 96 43 g 05 12 44 37 91 t 06 14 33 13 124 t 07 19 84 20 61 y 08 184 0 0 0 A 09 10 174 0 0 C 10 0 184 0 0 C 11 17 3 0 164 T 12 184 0 0 0 A 13 114 68 0 2 m 14 18 99 4 63 y 15 40 25 2 117 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB41.DAP:M0572:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB74.DAP/M0574/AthalianaCistrome XX ID MYB74.DAP:M0574:AthalianaCistrome XX NA MYB74.DAP XX DE MYB74.DAP XX OS Arabidopsis thaliana XX BF 12482; XX P0 A C G T 01 12 38 27 53 y 02 6 53 13 58 y 03 28 35 13 54 y 04 12 54 6 58 y 05 130 0 0 0 A 06 0 128 0 2 C 07 0 130 0 0 C 08 2 0 0 128 T 09 130 0 0 0 A 10 65 65 0 0 m 11 12 80 4 34 y 12 43 19 8 60 w 13 56 27 4 43 w 14 42 35 11 42 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB74.DAP:M0574:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB77.ampDAP/M0576/AthalianaCistrome XX ID MYB77.ampDAP:M0576:AthalianaCistrome XX NA MYB77.ampDAP XX DE MYB77.ampDAP XX OS Arabidopsis thaliana XX BF 10005; XX P0 A C G T 01 6 34 27 28 b 02 10 4 43 38 k 03 4 1 18 72 T 04 29 0 5 61 w 05 33 1 15 46 w 06 25 0 44 26 d 07 63 7 1 24 w 08 16 3 2 74 T 09 70 17 5 3 A 10 4 69 22 0 C 11 12 0 75 8 G 12 8 4 83 0 G 13 0 0 5 90 T 14 2 0 1 92 T 15 66 3 19 7 A 16 5 70 4 16 C 17 10 2 76 7 G 18 5 1 84 5 G 19 14 4 3 74 T 20 5 4 15 71 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB77.ampDAP:M0576:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB43.DAP/M0578/AthalianaCistrome XX ID MYB43.DAP:M0578:AthalianaCistrome XX NA MYB43.DAP XX DE MYB43.DAP XX OS Arabidopsis thaliana XX BF 12468; XX P0 A C G T 01 47 2 14 20 a 02 44 2 13 24 w 03 27 1 55 0 r 04 0 0 50 33 k 05 0 0 0 83 T 06 54 0 0 29 w 07 0 0 83 0 G 08 0 0 81 2 G 09 0 0 0 83 T 10 35 1 45 2 r 11 49 4 18 12 a 12 46 7 30 0 r 13 27 18 27 11 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB43.DAP:M0578:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EPR1.ampDAP/M0582/AthalianaCistrome XX ID EPR1.ampDAP:M0582:AthalianaCistrome XX NA EPR1.ampDAP XX DE EPR1.ampDAP XX OS Arabidopsis thaliana XX BF 11447; XX P0 A C G T 01 237 119 101 141 a 02 268 86 119 125 a 03 368 24 39 167 w 04 574 0 3 21 A 05 598 0 0 0 A 06 597 1 0 0 A 07 2 0 0 596 T 08 598 0 0 0 A 09 0 0 0 598 T 10 0 598 0 0 C 11 82 43 11 462 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EPR1.ampDAP:M0582:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G56840.ampDAP/M0583/AthalianaCistrome XX ID AT5G56840.ampDAP:M0583:AthalianaCistrome XX NA AT5G56840.ampDAP XX DE AT5G56840.ampDAP XX OS Arabidopsis thaliana XX BF 12312; XX P0 A C G T 01 169 138 59 233 w 02 224 100 72 203 w 03 200 93 56 250 w 04 296 65 55 183 w 05 336 43 60 160 w 06 48 307 46 198 y 07 128 328 64 79 c 08 18 17 0 564 T 09 12 0 2 585 T 10 599 0 0 0 A 11 0 0 0 599 T 12 0 599 0 0 C 13 1 473 2 123 C 14 409 10 54 126 A 15 202 104 23 270 w 16 300 20 20 259 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G56840.ampDAP:M0583:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g58900.ampDAP/M0585/AthalianaCistrome XX ID At5g58900.ampDAP:M0585:AthalianaCistrome XX NA At5g58900.ampDAP XX DE At5g58900.ampDAP XX OS Arabidopsis thaliana XX BF 12366; XX P0 A C G T 01 277 80 61 182 w 02 264 53 60 223 w 03 58 231 68 243 y 04 190 284 68 58 m 05 17 1 0 582 T 06 7 67 7 519 T 07 600 0 0 0 A 08 0 0 0 600 T 09 0 600 0 0 C 10 108 226 16 250 y 11 205 62 57 276 w 12 164 195 80 161 h 13 324 29 30 217 w 14 198 83 16 303 w 15 183 181 72 164 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g58900.ampDAP:M0585:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g09600.ampDAP/M0586/AthalianaCistrome XX ID At3g09600.ampDAP:M0586:AthalianaCistrome XX NA At3g09600.ampDAP XX DE At3g09600.ampDAP XX OS Arabidopsis thaliana XX BF 12349; XX P0 A C G T 01 496 9 28 65 A 02 0 0 598 0 G 03 598 0 0 0 A 04 0 0 0 598 T 05 583 0 0 15 A 06 1 1 0 596 T 07 0 0 0 598 T 08 56 7 0 535 T 09 147 30 40 381 t 10 132 121 109 236 t 11 160 121 132 185 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g09600.ampDAP:M0586:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G72740.ampDAP/M0588/AthalianaCistrome XX ID AT1G72740.ampDAP:M0588:AthalianaCistrome XX NA AT1G72740.ampDAP XX DE AT1G72740.ampDAP XX OS Arabidopsis thaliana XX BF 12272; XX P0 A C G T 01 198 76 178 140 r 02 151 75 218 148 d 03 173 76 132 211 w 04 182 53 136 221 w 05 149 91 95 257 w 06 160 90 94 248 w 07 233 89 176 94 r 08 166 69 238 119 r 09 266 38 206 82 r 10 212 24 140 216 w 11 0 135 3 454 T 12 0 0 0 592 T 13 592 0 0 0 A 14 0 0 591 1 G 15 0 0 592 0 G 16 0 0 555 37 G 17 0 34 0 558 T 18 28 2 0 562 T 19 122 47 13 410 T 20 153 146 132 161 w 21 104 74 233 181 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G72740.ampDAP:M0588:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g19000.ampDAP/M0590/AthalianaCistrome XX ID At1g19000.ampDAP:M0590:AthalianaCistrome XX NA At1g19000.ampDAP XX DE At1g19000.ampDAP XX OS Arabidopsis thaliana XX BF 11448; XX P0 A C G T 01 303 73 61 162 w 02 280 52 95 172 w 03 53 309 58 179 y 04 102 340 81 76 c 05 5 14 0 580 T 06 5 6 1 587 T 07 599 0 0 0 A 08 0 0 0 599 T 09 0 599 0 0 C 10 0 568 0 31 C 11 493 0 71 35 A 12 148 129 32 290 t 13 243 23 12 321 w 14 242 69 21 267 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g19000.ampDAP:M0590:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g52660.ampDAP/M0591/AthalianaCistrome XX ID At5g52660.ampDAP:M0591:AthalianaCistrome XX NA At5g52660.ampDAP XX DE At5g52660.ampDAP XX OS Arabidopsis thaliana XX BF 12365; XX P0 A C G T 01 523 10 20 44 A 02 0 0 597 0 G 03 597 0 0 0 A 04 0 0 0 597 T 05 591 0 0 6 A 06 0 0 0 597 T 07 0 0 0 597 T 08 37 3 0 557 T 09 135 40 38 384 t 10 120 131 95 251 t 11 143 89 141 224 t 12 142 99 119 237 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g52660.ampDAP:M0591:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LHY1.ampDAP/M0592/AthalianaCistrome XX ID LHY1.ampDAP:M0592:AthalianaCistrome XX NA LHY1.ampDAP XX DE LHY1.ampDAP XX OS Arabidopsis thaliana XX BF 17711; XX P0 A C G T 01 443 10 48 95 A 02 0 0 596 0 G 03 596 0 0 0 A 04 0 0 0 596 T 05 576 1 0 19 A 06 0 6 16 574 T 07 1 9 0 586 T 08 63 14 6 513 T 09 153 52 80 311 w 10 140 107 104 245 t 11 184 108 141 163 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LHY1.ampDAP:M0592:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g01280.ampDAP/M0593/AthalianaCistrome XX ID At4g01280.ampDAP:M0593:AthalianaCistrome XX NA At4g01280.ampDAP XX DE At4g01280.ampDAP XX OS Arabidopsis thaliana XX BF 12354; XX P0 A C G T 01 494 15 33 55 A 02 0 0 597 0 G 03 597 0 0 0 A 04 0 0 0 597 T 05 548 0 0 49 A 06 0 1 0 596 T 07 2 4 0 591 T 08 57 15 8 517 T 09 128 49 46 374 t 10 105 126 118 248 t 11 149 113 131 204 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g01280.ampDAP:M0593:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RVE1.ampDAP/M0594/AthalianaCistrome XX ID RVE1.ampDAP:M0594:AthalianaCistrome XX NA RVE1.ampDAP XX DE RVE1.ampDAP XX OS Arabidopsis thaliana XX BF 8892; XX P0 A C G T 01 375 27 65 133 a 02 0 0 600 0 G 03 600 0 0 0 A 04 0 0 0 600 T 05 521 51 0 28 A 06 1 28 12 559 T 07 6 10 2 582 T 08 118 31 36 415 T 09 149 92 101 258 t 10 128 148 114 210 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RVE1.ampDAP:M0594:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G61620.ampDAP/M0596/AthalianaCistrome XX ID AT5G61620.ampDAP:M0596:AthalianaCistrome XX NA AT5G61620.ampDAP XX DE AT5G61620.ampDAP XX OS Arabidopsis thaliana XX BF 12315; XX P0 A C G T 01 73 219 70 236 y 02 106 332 53 107 c 03 11 26 0 561 T 04 10 8 1 579 T 05 598 0 0 0 A 06 0 0 0 598 T 07 0 598 0 0 C 08 0 528 0 70 C 09 454 2 59 83 A 10 206 162 46 184 h 11 337 23 10 228 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G61620.ampDAP:M0596:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g49010.ampDAP/M0601/AthalianaCistrome XX ID At1g49010.ampDAP:M0601:AthalianaCistrome XX NA At1g49010.ampDAP XX DE At1g49010.ampDAP XX OS Arabidopsis thaliana XX BF 17712; XX P0 A C G T 01 185 68 178 166 d 02 280 41 102 174 w 03 254 25 32 286 w 04 163 66 213 155 d 05 229 82 50 236 w 06 185 4 350 58 r 07 0 0 597 0 G 08 595 2 0 0 A 09 0 0 0 597 T 10 578 0 16 3 A 11 592 0 2 3 A 12 12 55 469 61 G 13 212 45 309 31 r 14 171 45 28 353 w 15 147 61 73 316 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g49010.ampDAP:M0601:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g08520.ampDAP/M0602/AthalianaCistrome XX ID At5g08520.ampDAP:M0602:AthalianaCistrome XX NA At5g08520.ampDAP XX DE At5g08520.ampDAP XX OS Arabidopsis thaliana XX BF 11465; XX P0 A C G T 01 40 283 40 234 y 02 91 409 72 25 C 03 0 2 0 595 T 04 1 36 0 560 T 05 597 0 0 0 A 06 0 0 0 597 T 07 0 597 0 0 C 08 74 301 4 218 y 09 226 54 67 250 w 10 161 195 36 205 h 11 301 19 24 253 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g08520.ampDAP:M0602:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G10580.ampDAP/M0606/AthalianaCistrome XX ID AT3G10580.ampDAP:M0606:AthalianaCistrome XX NA AT3G10580.ampDAP XX DE AT3G10580.ampDAP XX OS Arabidopsis thaliana XX BF 12288; XX P0 A C G T 01 12 300 65 0 C 02 0 377 0 0 C 03 0 0 356 21 G 04 328 3 28 18 A 05 225 31 50 71 a 06 337 4 15 21 A 07 347 2 7 21 A 08 217 16 15 129 w 09 155 56 61 105 w 10 28 66 13 270 T 11 26 351 0 0 C 12 0 0 377 0 G 13 0 49 324 4 G 14 201 26 85 65 a 15 130 40 114 93 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G10580.ampDAP:M0606:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LCL1.ampDAP/M0611/AthalianaCistrome XX ID LCL1.ampDAP:M0611:AthalianaCistrome XX NA LCL1.ampDAP XX DE LCL1.ampDAP XX OS Arabidopsis thaliana XX BF 12442; XX P0 A C G T 01 557 0 17 13 A 02 0 0 587 0 G 03 587 0 0 0 A 04 0 0 0 587 T 05 587 0 0 0 A 06 0 0 0 587 T 07 0 0 0 587 T 08 17 1 0 569 T 09 127 39 15 406 T 10 107 111 97 272 t 11 146 84 141 216 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LCL1.ampDAP:M0611:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRP2.ampDAP/M0612/AthalianaCistrome XX ID TRP2.ampDAP:M0612:AthalianaCistrome XX NA TRP2.ampDAP XX DE TRP2.ampDAP XX OS Arabidopsis thaliana XX BF 12528; XX P0 A C G T 01 90 3 2 9 A 02 85 2 4 13 A 03 87 1 1 15 A 04 0 85 5 14 C 05 9 88 5 2 C 06 7 75 5 17 C 07 12 2 1 89 T 08 103 0 1 0 A 09 104 0 0 0 A 10 101 3 0 0 A 11 2 102 0 0 C 12 1 103 0 0 C 13 0 102 0 2 C 14 5 0 0 99 T 15 99 0 4 1 A 16 99 0 3 2 A 17 97 0 2 5 A 18 7 80 1 16 C 19 14 75 1 14 C 20 4 76 1 23 C 21 11 10 5 78 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRP2.ampDAP:M0612:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g74840.ampDAP/M0615/AthalianaCistrome XX ID At1g74840.ampDAP:M0615:AthalianaCistrome XX NA At1g74840.ampDAP XX DE At1g74840.ampDAP XX OS Arabidopsis thaliana XX BF 11452; XX P0 A C G T 01 275 87 69 154 w 02 251 40 83 211 w 03 94 211 90 190 y 04 142 207 72 164 y 05 25 16 1 543 T 06 0 0 0 585 T 07 585 0 0 0 A 08 0 0 0 585 T 09 0 585 0 0 C 10 0 576 0 9 C 11 480 2 65 38 A 12 187 102 28 268 w 13 250 14 10 311 w 14 238 56 17 274 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g74840.ampDAP:M0615:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g47390.ampDAP/M0616/AthalianaCistrome XX ID At5g47390.ampDAP:M0616:AthalianaCistrome XX NA At5g47390.ampDAP XX DE At5g47390.ampDAP XX OS Arabidopsis thaliana XX BF 11469; XX P0 A C G T 01 280 18 59 225 w 02 265 6 12 299 w 03 215 29 123 215 w 04 65 49 0 468 T 05 67 1 513 1 G 06 0 0 582 0 G 07 582 0 0 0 A 08 0 0 0 582 T 09 567 8 4 3 A 10 530 1 18 33 A 11 107 67 266 142 g 12 206 64 229 83 r 13 176 71 33 302 w 14 170 47 61 304 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g47390.ampDAP:M0616:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g11280.ampDAP/M0619/AthalianaCistrome XX ID At3g11280.ampDAP:M0619:AthalianaCistrome XX NA At3g11280.ampDAP XX DE At3g11280.ampDAP XX OS Arabidopsis thaliana XX BF 12350; XX P0 A C G T 01 119 145 79 156 y 02 150 118 84 147 w 03 113 107 51 228 t 04 207 59 65 168 w 05 302 36 62 99 a 06 39 171 49 240 y 07 12 479 8 0 C 08 0 1 0 498 T 09 0 3 0 496 T 10 499 0 0 0 A 11 0 2 0 497 T 12 0 499 0 0 C 13 82 149 33 235 y 14 119 71 84 225 t 15 134 134 66 165 h 16 222 46 43 188 w 17 132 92 64 211 w 18 158 133 82 126 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g11280.ampDAP:M0619:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G18960.DAP/M0620/AthalianaCistrome XX ID AT1G18960.DAP:M0620:AthalianaCistrome XX NA AT1G18960.DAP XX DE AT1G18960.DAP XX OS Arabidopsis thaliana XX BF 12260; XX P0 A C G T 01 29 58 37 47 y 02 85 23 26 37 a 03 62 28 40 41 a 04 46 67 15 43 h 05 73 28 31 39 a 06 44 39 31 57 w 07 51 60 13 47 h 08 76 23 21 51 w 09 51 30 29 61 w 10 0 171 0 0 C 11 164 7 0 0 A 12 100 61 10 0 m 13 0 167 4 0 C 14 164 0 0 7 A 15 159 12 0 0 A 16 0 170 0 1 C 17 90 28 24 29 a 18 48 36 24 63 w 19 37 51 38 45 y 20 74 26 32 39 a 21 43 49 31 48 h 22 45 66 15 45 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G18960.DAP:M0620:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TBP3.ampDAP/M0621/AthalianaCistrome XX ID TBP3.ampDAP:M0621:AthalianaCistrome XX NA TBP3.ampDAP XX DE TBP3.ampDAP XX OS Arabidopsis thaliana XX BF 11471; XX P0 A C G T 01 85 24 95 51 r 02 154 7 71 23 r 03 96 9 57 93 w 04 2 21 1 231 T 05 0 1 3 251 T 06 232 5 18 0 A 07 3 13 239 0 G 08 10 3 237 5 G 09 4 1 239 11 G 10 0 66 3 186 Y 11 54 2 2 197 T 12 49 35 4 167 t 13 130 38 37 50 a 14 76 23 83 73 d 15 64 19 96 76 d 16 61 26 66 102 k 17 54 33 30 138 t 18 28 48 39 140 t 19 44 21 64 126 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TBP3.ampDAP:M0621:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT4G12670.ampDAP/M0623/AthalianaCistrome XX ID AT4G12670.ampDAP:M0623:AthalianaCistrome XX NA AT4G12670.ampDAP XX DE AT4G12670.ampDAP XX OS Arabidopsis thaliana XX BF 12300; XX P0 A C G T 01 21 40 0 1 m 02 0 61 1 0 C 03 0 0 0 62 T 04 45 15 0 2 A 05 62 0 0 0 A 06 61 0 1 0 A 07 0 43 1 18 Y 08 1 58 1 2 C 09 21 40 1 0 m 10 0 0 0 62 T 11 58 0 2 2 A 12 43 18 1 0 M 13 61 0 0 1 A 14 0 62 0 0 C 15 17 42 0 3 m 16 0 46 0 16 Y 17 0 0 17 45 K 18 61 0 0 1 A 19 44 15 2 1 A 20 61 0 1 0 A 21 3 41 0 18 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT4G12670.ampDAP:M0623:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SND3.ampDAP/M0626/AthalianaCistrome XX ID SND3.ampDAP:M0626:AthalianaCistrome XX NA SND3.ampDAP XX DE SND3.ampDAP XX OS Arabidopsis thaliana XX BF 12512; XX P0 A C G T 01 115 83 268 124 g 02 124 33 22 411 T 03 251 13 93 233 w 04 178 76 163 173 d 05 8 577 1 4 C 06 0 0 96 494 T 07 0 0 0 590 T 08 69 263 219 39 s 09 163 86 27 314 w 10 122 140 99 229 t 11 133 233 105 119 c 12 143 188 74 185 y 13 233 39 69 249 w 14 2 377 57 154 y 15 590 0 0 0 A 16 281 309 0 0 m 17 11 0 536 43 G 18 80 239 64 207 y 19 215 94 25 256 w 20 380 12 7 191 w 21 76 332 61 121 c 22 154 217 56 163 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SND3.ampDAP:M0626:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SMB.ampDAP/M0627/AthalianaCistrome XX ID SMB.ampDAP:M0627:AthalianaCistrome XX NA SMB.ampDAP XX DE SMB.ampDAP XX OS Arabidopsis thaliana XX BF 12510; XX P0 A C G T 01 53 517 0 21 C 02 0 0 412 179 K 03 0 0 0 591 T 04 224 13 354 0 r 05 200 118 88 185 w 06 206 89 202 94 r 07 169 106 160 156 d 08 202 103 79 207 w 09 176 75 102 238 w 10 59 262 174 96 s 11 577 10 1 3 A 12 417 167 7 0 M 13 3 0 572 16 G 14 96 245 103 147 c 15 360 61 41 129 a 16 524 2 0 65 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SMB.ampDAP:M0627:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SND2.ampDAP/M0628/AthalianaCistrome XX ID SND2.ampDAP:M0628:AthalianaCistrome XX NA SND2.ampDAP XX DE SND2.ampDAP XX OS Arabidopsis thaliana XX BF 12511; XX P0 A C G T 01 367 7 85 137 a 02 177 28 338 53 r 03 27 556 0 13 C 04 0 0 458 138 G 05 0 0 0 596 T 06 206 53 331 6 r 07 309 34 2 251 w 08 168 121 131 176 w 09 94 146 252 104 g 10 227 117 124 128 a 11 301 18 74 203 w 12 8 244 266 78 s 13 596 0 0 0 A 14 418 178 0 0 M 15 8 0 587 1 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SND2.ampDAP:M0628:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SND3.DAP/M0629/AthalianaCistrome XX ID SND3.DAP:M0629:AthalianaCistrome XX NA SND3.DAP XX DE SND3.DAP XX OS Arabidopsis thaliana XX BF 12512; XX P0 A C G T 01 320 10 79 189 w 02 204 18 353 23 r 03 24 564 0 10 C 04 0 0 388 210 k 05 0 0 0 598 T 06 160 68 370 0 r 07 251 53 24 270 w 08 159 123 164 152 d 09 94 131 277 96 g 10 198 129 144 127 a 11 301 28 76 193 w 12 13 307 222 56 s 13 598 0 0 0 A 14 419 179 0 0 M 15 0 0 595 3 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SND3.DAP:M0629:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SMB.DAP/M0630/AthalianaCistrome XX ID SMB.DAP:M0630:AthalianaCistrome XX NA SMB.DAP XX DE SMB.DAP XX OS Arabidopsis thaliana XX BF 12510; XX P0 A C G T 01 102 67 332 99 g 02 167 41 314 78 r 03 93 3 3 501 T 04 249 7 97 247 w 05 277 14 288 21 r 06 52 539 0 9 C 07 0 0 418 182 K 08 0 0 0 600 T 09 240 34 322 4 r 10 212 125 84 179 w 11 261 62 157 120 r 12 194 94 142 170 w 13 165 150 54 231 h 14 212 60 95 233 w 15 39 318 127 116 c 16 594 6 0 0 A 17 428 171 1 0 M 18 0 2 578 20 G 19 87 267 85 161 y 20 396 62 25 117 a 21 550 0 4 46 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SMB.DAP:M0630:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC016.DAP/M0631/AthalianaCistrome XX ID ANAC016.DAP:M0631:AthalianaCistrome XX NA ANAC016.DAP XX DE ANAC016.DAP XX OS Arabidopsis thaliana XX BF 17719; XX P0 A C G T 01 0 596 0 1 C 02 0 0 261 336 k 03 0 0 0 597 T 04 19 0 578 0 G 05 119 186 181 111 s 06 255 80 153 109 r 07 89 91 282 135 g 08 240 162 130 65 m 09 251 87 120 139 a 10 3 522 51 21 C 11 597 0 0 0 A 12 319 278 0 0 m 13 2 0 577 18 G 14 55 201 163 178 b 15 355 126 1 115 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC016.DAP:M0631:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC071.DAP/M0632/AthalianaCistrome XX ID ANAC071.DAP:M0632:AthalianaCistrome XX NA ANAC071.DAP XX DE ANAC071.DAP XX OS Arabidopsis thaliana XX BF 12244; XX P0 A C G T 01 124 0 50 420 T 02 300 39 202 53 r 03 18 575 0 1 C 04 0 0 218 376 k 05 0 0 0 594 T 06 50 87 440 17 G 07 319 73 113 89 a 08 267 74 184 69 r 09 179 80 226 109 r 10 248 75 135 136 a 11 208 61 79 246 w 12 64 201 302 27 s 13 592 0 2 0 A 14 512 80 2 0 A 15 0 0 591 3 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC071.DAP:M0632:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC070.ampDAP/M0633/AthalianaCistrome XX ID ANAC070.ampDAP:M0633:AthalianaCistrome XX NA ANAC070.ampDAP XX DE ANAC070.ampDAP XX OS Arabidopsis thaliana XX BF 12243; XX P0 A C G T 01 22 574 0 2 C 02 0 0 161 437 K 03 0 0 3 595 T 04 119 125 321 33 g 05 233 116 64 185 w 06 273 43 127 155 w 07 192 105 99 202 w 08 101 156 84 257 y 09 198 92 109 199 w 10 4 318 29 247 y 11 597 1 0 0 A 12 180 418 0 0 M 13 1 0 553 44 G 14 30 278 19 271 y 15 264 81 4 249 w 16 474 5 0 119 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC070.ampDAP:M0633:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC2.ampDAP/M0634/AthalianaCistrome XX ID NAC2.ampDAP:M0634:AthalianaCistrome XX NA NAC2.ampDAP XX DE NAC2.ampDAP XX OS Arabidopsis thaliana XX BF 11523; XX P0 A C G T 01 8 589 1 1 C 02 0 3 147 449 T 03 0 1 0 598 T 04 68 67 456 8 G 05 104 131 26 338 t 06 86 117 137 259 t 07 117 173 170 139 s 08 123 232 72 172 y 09 210 156 155 78 v 10 2 585 5 7 C 11 599 0 0 0 A 12 562 37 0 0 A 13 0 0 599 0 G 14 325 98 66 110 a 15 455 94 0 50 A 16 579 0 0 20 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC2.ampDAP:M0634:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NST1.ampDAP/M0635/AthalianaCistrome XX ID NST1.ampDAP:M0635:AthalianaCistrome XX NA NST1.ampDAP XX DE NST1.ampDAP XX OS Arabidopsis thaliana XX BF 11521; XX P0 A C G T 01 50 543 0 5 C 02 0 0 375 223 k 03 0 0 0 598 T 04 245 30 317 6 r 05 232 133 90 143 a 06 297 70 146 85 a 07 236 105 102 155 w 08 163 127 49 259 w 09 206 67 92 233 w 10 38 288 158 114 s 11 594 4 0 0 A 12 429 167 2 0 M 13 0 0 578 20 G 14 69 372 49 108 c 15 454 20 24 100 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NST1.ampDAP:M0635:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC058.DAP/M0636/AthalianaCistrome XX ID ANAC058.DAP:M0636:AthalianaCistrome XX NA ANAC058.DAP XX DE ANAC058.DAP XX OS Arabidopsis thaliana XX BF 8864; XX P0 A C G T 01 3 588 0 0 C 02 0 1 226 364 k 03 0 0 0 591 T 04 80 44 457 10 G 05 117 87 39 348 t 06 156 118 181 136 r 07 172 213 80 126 m 08 191 165 90 145 m 09 355 22 129 85 a 10 5 458 39 89 C 11 591 0 0 0 A 12 270 321 0 0 m 13 0 0 570 21 G 14 74 162 26 329 y 15 277 81 4 229 w 16 523 4 7 57 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC058.DAP:M0636:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC046.ampDAP/M0637/AthalianaCistrome XX ID ANAC046.ampDAP:M0637:AthalianaCistrome XX NA ANAC046.ampDAP XX DE ANAC046.ampDAP XX OS Arabidopsis thaliana XX BF 8862; XX P0 A C G T 01 14 571 8 7 C 02 4 15 181 400 k 03 20 4 6 570 T 04 88 114 372 26 g 05 112 105 36 347 t 06 146 143 129 182 t 07 142 203 91 164 y 08 143 205 68 184 y 09 380 25 90 105 a 10 1 484 6 109 C 11 600 0 0 0 A 12 184 416 0 0 M 13 0 0 595 5 G 14 42 184 50 324 y 15 235 98 7 260 w 16 529 0 2 69 A 17 98 261 58 183 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC046.ampDAP:M0637:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND6.DAP/M0638/AthalianaCistrome XX ID VND6.DAP:M0638:AthalianaCistrome XX NA VND6.DAP XX DE VND6.DAP XX OS Arabidopsis thaliana XX BF 12537; XX P0 A C G T 01 47 0 2 550 T 02 70 15 40 474 T 03 108 43 409 39 G 04 12 587 0 0 C 05 0 0 175 424 K 06 0 0 0 599 T 07 102 104 331 62 g 08 180 107 67 245 w 09 212 51 138 198 w 10 159 113 113 214 w 11 116 129 77 277 t 12 122 76 110 291 t 13 9 238 54 298 y 14 599 0 0 0 A 15 245 354 0 0 m 16 0 0 546 53 G 17 31 279 33 256 y 18 264 108 3 224 w 19 421 0 4 174 W 20 85 264 55 195 y 21 126 288 90 95 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND6.DAP:M0638:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC017.ampDAP/M0639/AthalianaCistrome XX ID ANAC017.ampDAP:M0639:AthalianaCistrome XX NA ANAC017.ampDAP XX DE ANAC017.ampDAP XX OS Arabidopsis thaliana XX BF 12231; XX P0 A C G T 01 81 8 4 400 T 02 113 0 82 298 t 03 213 105 85 90 a 04 0 493 0 0 C 05 0 0 208 285 k 06 0 0 0 493 T 07 15 0 478 0 G 08 107 116 190 80 g 09 183 63 147 100 r 10 81 67 263 82 g 11 208 134 111 40 m 12 225 79 127 62 r 13 0 468 12 13 C 14 493 0 0 0 A 15 326 167 0 0 m 16 0 0 484 9 G 17 77 106 198 112 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC017.ampDAP:M0639:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC083.DAP/M0640/AthalianaCistrome XX ID ANAC083.DAP:M0640:AthalianaCistrome XX NA ANAC083.DAP XX DE ANAC083.DAP XX OS Arabidopsis thaliana XX BF 11525; XX P0 A C G T 01 63 17 6 511 T 02 97 5 33 462 T 03 234 86 163 114 r 04 20 577 0 0 C 05 0 0 303 294 k 06 0 0 0 597 T 07 135 80 363 19 g 08 122 78 35 362 t 09 156 97 148 196 w 10 151 149 126 171 w 11 131 149 66 251 t 12 292 44 93 168 w 13 3 339 14 241 y 14 597 0 0 0 A 15 94 503 0 0 C 16 1 0 546 50 G 17 51 194 44 308 y 18 332 90 0 175 w 19 468 8 1 120 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC083.DAP:M0640:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC045.DAP/M0641/AthalianaCistrome XX ID ANAC045.DAP:M0641:AthalianaCistrome XX NA ANAC045.DAP XX DE ANAC045.DAP XX OS Arabidopsis thaliana XX BF 17741; XX P0 A C G T 01 2 593 0 0 C 02 0 17 258 320 k 03 0 1 0 594 T 04 93 55 437 10 G 05 152 142 72 229 w 06 192 83 183 137 r 07 147 111 196 141 g 08 190 143 111 151 w 09 273 53 116 153 w 10 33 362 178 22 s 11 595 0 0 0 A 12 494 94 7 0 A 13 0 0 594 1 G 14 119 243 83 150 y 15 429 72 2 92 A 16 585 0 0 10 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC045.DAP:M0641:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND2.DAP/M0642/AthalianaCistrome XX ID VND2.DAP:M0642:AthalianaCistrome XX NA VND2.DAP XX DE VND2.DAP XX OS Arabidopsis thaliana XX BF 17753; XX P0 A C G T 01 24 576 0 0 C 02 0 0 259 341 k 03 0 0 0 600 T 04 169 71 341 19 r 05 246 116 97 141 a 06 295 66 125 114 a 07 216 132 142 110 a 08 183 180 82 155 h 09 254 74 107 165 w 10 40 344 96 120 c 11 600 0 0 0 A 12 349 251 0 0 m 13 0 0 578 22 G 14 6 431 6 157 Y 15 436 43 1 120 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND2.DAP:M0642:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NST1.DAP/M0643/AthalianaCistrome XX ID NST1.DAP:M0643:AthalianaCistrome XX NA NST1.DAP XX DE NST1.DAP XX OS Arabidopsis thaliana XX BF 11521; XX P0 A C G T 01 117 3 0 476 T 02 268 3 93 232 w 03 283 21 254 38 r 04 54 542 0 0 C 05 0 0 378 218 k 06 0 0 2 594 T 07 291 50 252 3 r 08 271 121 88 116 a 09 315 57 130 94 a 10 240 80 105 171 w 11 164 119 43 270 w 12 220 54 89 233 w 13 47 301 148 100 c 14 596 0 0 0 A 15 421 175 0 0 M 16 3 0 571 22 G 17 62 378 56 100 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NST1.DAP:M0643:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC050.ampDAP/M0644/AthalianaCistrome XX ID ANAC050.ampDAP:M0644:AthalianaCistrome XX NA ANAC050.ampDAP XX DE ANAC050.ampDAP XX OS Arabidopsis thaliana XX BF 17748; XX P0 A C G T 01 97 0 93 407 T 02 235 108 114 140 a 03 1 595 0 1 C 04 0 0 115 482 T 05 0 0 0 597 T 06 20 0 577 0 G 07 128 145 154 170 k 08 198 75 273 51 r 09 151 78 177 191 d 10 236 106 112 143 a 11 285 38 171 103 r 12 17 418 98 64 C 13 597 0 0 0 A 14 477 120 0 0 A 15 1 0 595 1 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC050.ampDAP:M0644:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC096.DAP/M0645/AthalianaCistrome XX ID ANAC096.DAP:M0645:AthalianaCistrome XX NA ANAC096.DAP XX DE ANAC096.DAP XX OS Arabidopsis thaliana XX BF 12248; XX P0 A C G T 01 3 594 0 0 C 02 0 0 152 445 K 03 0 0 0 597 T 04 154 82 342 19 r 05 223 133 104 137 a 06 261 59 172 105 r 07 191 106 212 88 r 08 214 109 136 138 a 09 201 48 65 283 w 10 67 217 271 42 s 11 597 0 0 0 A 12 553 44 0 0 A 13 0 0 594 3 G 14 128 195 84 190 y 15 527 17 0 53 A 16 591 0 0 6 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC096.DAP:M0645:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTM1.DAP/M0646/AthalianaCistrome XX ID NTM1.DAP:M0646:AthalianaCistrome XX NA NTM1.DAP XX DE NTM1.DAP XX OS Arabidopsis thaliana XX BF 17755; XX P0 A C G T 01 392 95 112 0 a 02 0 599 0 0 C 03 0 0 5 594 T 04 0 0 0 599 T 05 122 217 253 7 s 06 59 129 40 371 t 07 112 126 140 221 t 08 71 246 90 192 y 09 204 175 122 98 m 10 180 167 86 166 h 11 0 180 28 391 y 12 599 0 0 0 A 13 599 0 0 0 A 14 0 0 599 0 G 15 7 114 66 412 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTM1.DAP:M0646:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC070.DAP/M0647/AthalianaCistrome XX ID ANAC070.DAP:M0647:AthalianaCistrome XX NA ANAC070.DAP XX DE ANAC070.DAP XX OS Arabidopsis thaliana XX BF 12243; XX P0 A C G T 01 99 72 312 116 g 02 192 44 261 102 r 03 107 3 2 487 T 04 271 4 88 236 w 05 295 18 272 14 r 06 60 534 0 5 C 07 0 0 439 160 K 08 0 0 0 599 T 09 289 38 270 2 r 10 250 116 71 162 w 11 300 63 124 112 a 12 239 89 89 182 w 13 177 108 44 270 w 14 229 50 95 225 w 15 32 315 118 134 c 16 598 1 0 0 A 17 413 186 0 0 M 18 0 1 569 29 G 19 84 309 52 154 y 20 418 49 11 121 A 21 556 0 1 42 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC070.DAP:M0647:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND4.DAP/M0648/AthalianaCistrome XX ID VND4.DAP:M0648:AthalianaCistrome XX NA VND4.DAP XX DE VND4.DAP XX OS Arabidopsis thaliana XX BF 12536; XX P0 A C G T 01 41 559 0 0 C 02 0 0 343 257 k 03 0 0 0 600 T 04 311 39 241 9 r 05 308 101 72 119 a 06 306 72 114 108 a 07 259 95 113 133 a 08 223 126 57 194 w 09 258 59 88 195 w 10 35 300 92 173 y 11 599 1 0 0 A 12 324 276 0 0 m 13 1 0 568 31 G 14 15 458 6 121 C 15 449 26 1 124 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND4.DAP:M0648:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC083.ampDAP/M0649/AthalianaCistrome XX ID ANAC083.ampDAP:M0649:AthalianaCistrome XX NA ANAC083.ampDAP XX DE ANAC083.ampDAP XX OS Arabidopsis thaliana XX BF 11525; XX P0 A C G T 01 25 571 2 2 C 02 0 0 439 161 K 03 0 0 0 600 T 04 219 13 367 1 r 05 182 105 46 267 w 06 263 77 163 97 r 07 202 134 160 104 r 08 224 132 88 156 w 09 378 34 69 119 a 10 25 360 85 130 c 11 599 0 1 0 A 12 253 347 0 0 m 13 1 0 548 51 G 14 68 250 49 233 y 15 515 10 0 75 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC083.ampDAP:M0649:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC050.DAP/M0650/AthalianaCistrome XX ID ANAC050.DAP:M0650:AthalianaCistrome XX NA ANAC050.DAP XX DE ANAC050.DAP XX OS Arabidopsis thaliana XX BF 17748; BF 13890; XX P0 A C G T 01 0 599 0 0 C 02 0 0 68 531 T 03 0 0 0 599 T 04 6 8 585 0 G 05 80 178 93 248 y 06 179 87 231 102 r 07 189 122 86 202 w 08 175 194 50 180 h 09 295 58 184 62 r 10 1 526 28 44 C 11 599 0 0 0 A 12 441 158 0 0 M 13 0 0 599 0 G 14 60 106 98 335 t 15 255 128 0 216 w 16 544 0 0 55 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC050.DAP:M0650:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC2.DAP/M0651/AthalianaCistrome XX ID NAC2.DAP:M0651:AthalianaCistrome XX NA NAC2.DAP XX DE NAC2.DAP XX OS Arabidopsis thaliana XX BF 11523; XX P0 A C G T 01 6 592 1 0 C 02 0 0 92 507 T 03 0 0 0 599 T 04 50 65 471 13 G 05 57 130 39 373 t 06 82 93 136 288 t 07 101 195 157 146 s 08 124 217 79 179 y 09 202 123 154 120 r 10 0 591 2 6 C 11 599 0 0 0 A 12 562 36 1 0 A 13 0 0 599 0 G 14 386 72 30 111 a 15 483 59 0 57 A 16 588 0 0 11 A 17 102 315 59 123 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC2.DAP:M0651:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATAF1.DAP/M0652/AthalianaCistrome XX ID ATAF1.DAP:M0652:AthalianaCistrome XX NA ATAF1.DAP XX DE ATAF1.DAP XX OS Arabidopsis thaliana XX BF 12318; XX P0 A C G T 01 69 11 230 285 k 02 337 118 103 37 a 03 0 593 2 0 C 04 7 1 577 10 G 05 7 0 2 586 T 06 211 11 364 9 r 07 207 78 43 267 w 08 193 127 101 174 w 09 143 144 152 156 k 10 208 109 160 118 r 11 331 35 86 143 a 12 122 181 74 218 y 13 213 62 6 314 w 14 96 194 46 259 y 15 61 32 379 123 g 16 129 114 159 193 k 17 178 258 21 138 m 18 193 120 41 241 w 19 224 71 39 261 w 20 57 325 73 140 c 21 84 146 89 276 t 22 141 68 131 255 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATAF1.DAP:M0652:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC071.ampDAP/M0653/AthalianaCistrome XX ID ANAC071.ampDAP:M0653:AthalianaCistrome XX NA ANAC071.ampDAP XX DE ANAC071.ampDAP XX OS Arabidopsis thaliana XX BF 12244; XX P0 A C G T 01 17 574 5 0 C 02 0 4 94 498 T 03 2 2 0 592 T 04 33 285 230 48 s 05 282 83 54 177 w 06 165 121 112 198 w 07 134 205 99 158 y 08 97 158 104 237 y 09 129 129 92 246 t 10 19 405 117 55 c 11 596 0 0 0 A 12 405 191 0 0 m 13 0 0 590 6 G 14 28 227 22 319 y 15 471 23 0 102 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC071.ampDAP:M0653:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC004.ampDAP/M0654/AthalianaCistrome XX ID ANAC004.ampDAP:M0654:AthalianaCistrome XX NA ANAC004.ampDAP XX DE ANAC004.ampDAP XX OS Arabidopsis thaliana XX BF 17708; XX P0 A C G T 01 269 24 69 238 w 02 265 121 176 38 r 03 0 597 2 1 C 04 0 0 0 600 T 05 0 0 0 600 T 06 141 197 253 9 s 07 8 155 15 422 Y 08 100 98 96 306 t 09 56 232 96 216 y 10 184 126 107 183 w 11 349 43 191 17 r 12 2 355 41 202 y 13 600 0 0 0 A 14 598 1 0 1 A 15 0 1 598 1 G 16 41 175 30 354 y 17 208 18 11 363 w 18 201 63 28 308 w 19 71 250 191 88 s 20 158 200 116 126 m 21 124 79 113 284 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC004.ampDAP:M0654:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC028.DAP/M0655/AthalianaCistrome XX ID ANAC028.DAP:M0655:AthalianaCistrome XX NA ANAC028.DAP XX DE ANAC028.DAP XX OS Arabidopsis thaliana XX BF 12233; XX P0 A C G T 01 0 596 0 0 C 02 0 0 81 515 T 03 0 0 0 596 T 04 21 188 352 35 s 05 144 115 54 283 t 06 135 121 155 185 k 07 148 198 94 156 y 08 119 189 67 221 y 09 215 59 159 163 d 10 4 437 72 83 C 11 596 0 0 0 A 12 359 237 0 0 m 13 0 0 584 12 G 14 80 184 51 281 y 15 307 92 0 197 w 16 506 0 1 89 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC028.DAP:M0655:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC020.DAP/M0656/AthalianaCistrome XX ID ANAC020.DAP:M0656:AthalianaCistrome XX NA ANAC020.DAP XX DE ANAC020.DAP XX OS Arabidopsis thaliana XX BF 12232; XX P0 A C G T 01 12 0 0 588 T 02 86 5 88 421 T 03 168 83 200 149 r 04 0 600 0 0 C 05 0 0 155 445 K 06 0 0 0 600 T 07 30 103 450 17 G 08 120 116 34 330 t 09 146 115 137 202 t 10 142 186 105 167 y 11 160 167 84 189 h 12 327 30 121 122 a 13 0 497 19 84 C 14 600 0 0 0 A 15 259 340 0 1 m 16 2 1 578 19 G 17 63 176 44 317 y 18 241 106 0 253 w 19 492 1 0 107 A 20 100 254 54 192 y 21 53 366 71 110 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC020.DAP:M0656:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND4.ampDAP/M0657/AthalianaCistrome XX ID VND4.ampDAP:M0657:AthalianaCistrome XX NA VND4.ampDAP XX DE VND4.ampDAP XX OS Arabidopsis thaliana XX BF 12536; XX P0 A C G T 01 45 552 0 0 C 02 0 0 418 179 K 03 0 0 0 597 T 04 319 25 253 0 r 05 273 100 95 129 a 06 273 92 141 91 a 07 218 97 136 146 a 08 218 120 55 204 w 09 242 55 95 205 w 10 36 325 109 127 c 11 595 2 0 0 A 12 406 191 0 0 M 13 0 0 575 22 G 14 63 371 34 129 c 15 433 55 9 100 A 16 544 0 0 53 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND4.ampDAP:M0657:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC047.DAP/M0658/AthalianaCistrome XX ID ANAC047.DAP:M0658:AthalianaCistrome XX NA ANAC047.DAP XX DE ANAC047.DAP XX OS Arabidopsis thaliana XX BF 17736; XX P0 A C G T 01 301 100 82 117 a 02 362 27 171 40 r 03 129 58 384 29 g 04 209 0 0 391 w 05 64 3 220 313 k 06 346 91 138 25 a 07 5 588 6 1 C 08 3 0 597 0 G 09 0 0 0 600 T 10 151 20 425 4 R 11 143 73 53 331 t 12 221 99 124 156 w 13 186 102 155 157 d 14 223 89 121 167 w 15 328 42 76 154 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC047.DAP:M0658:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC005.DAP/M0659/AthalianaCistrome XX ID ANAC005.DAP:M0659:AthalianaCistrome XX NA ANAC005.DAP XX DE ANAC005.DAP XX OS Arabidopsis thaliana XX BF 12227; XX P0 A C G T 01 131 35 16 408 T 02 213 46 54 277 w 03 245 108 160 77 r 04 0 589 0 1 C 05 0 0 2 588 T 06 0 0 0 590 T 07 139 222 169 60 s 08 74 88 55 373 t 09 112 88 101 289 t 10 106 204 37 243 y 11 189 124 68 209 w 12 292 90 105 103 a 13 12 291 37 250 y 14 589 0 1 0 A 15 587 3 0 0 A 16 0 0 590 0 G 17 37 93 69 391 t 18 166 39 12 373 w 19 273 11 12 294 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC005.DAP:M0659:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC092.ampDAP/M0660/AthalianaCistrome XX ID ANAC092.ampDAP:M0660:AthalianaCistrome XX NA ANAC092.ampDAP XX DE ANAC092.ampDAP XX OS Arabidopsis thaliana XX BF 11526; XX P0 A C G T 01 53 3 4 526 T 02 136 12 76 362 t 03 207 95 142 142 a 04 8 578 0 0 C 05 2 0 229 355 k 06 2 1 0 583 T 07 93 74 412 7 G 08 103 97 24 362 t 09 144 121 143 178 t 10 151 197 112 126 m 11 156 168 73 189 h 12 354 27 101 104 a 13 0 467 26 93 C 14 586 0 0 0 A 15 220 366 0 0 m 16 2 0 573 11 G 17 48 201 37 300 y 18 278 92 5 211 w 19 530 0 0 56 A 20 72 298 40 176 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC092.ampDAP:M0660:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC055.DAP/M0661/AthalianaCistrome XX ID ANAC055.DAP:M0661:AthalianaCistrome XX NA ANAC055.DAP XX DE ANAC055.DAP XX OS Arabidopsis thaliana XX BF 8863; XX P0 A C G T 01 213 39 119 223 w 02 143 18 150 283 k 03 111 121 127 235 t 04 82 372 20 120 c 05 175 88 173 158 d 06 289 22 68 215 w 07 203 96 157 138 r 08 124 70 38 362 t 09 158 136 90 210 w 10 156 156 100 182 h 11 159 113 113 209 w 12 305 29 90 170 w 13 1 430 3 160 Y 14 594 0 0 0 A 15 1 593 0 0 C 16 0 0 594 0 G 17 26 68 153 347 k 18 355 203 2 34 m 19 422 0 3 169 W 20 71 311 54 158 y 21 44 195 32 323 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC055.DAP:M0661:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC053.ampDAP/M0662/AthalianaCistrome XX ID ANAC053.ampDAP:M0662:AthalianaCistrome XX NA ANAC053.ampDAP XX DE ANAC053.ampDAP XX OS Arabidopsis thaliana XX BF 12240; XX P0 A C G T 01 4 590 0 0 C 02 0 1 102 491 T 03 0 0 0 594 T 04 43 79 458 14 G 05 56 144 19 375 t 06 58 110 112 314 t 07 97 216 147 134 c 08 84 234 81 195 y 09 172 170 141 111 m 10 0 591 0 3 C 11 594 0 0 0 A 12 545 47 2 0 A 13 0 0 594 0 G 14 349 80 41 124 a 15 459 70 0 65 A 16 572 0 0 22 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC053.ampDAP:M0662:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND1.DAP/M0663/AthalianaCistrome XX ID VND1.DAP:M0663:AthalianaCistrome XX NA VND1.DAP XX DE VND1.DAP XX OS Arabidopsis thaliana XX BF 17725; XX P0 A C G T 01 18 579 0 0 C 02 0 0 203 394 k 03 0 0 0 597 T 04 119 117 329 32 g 05 192 95 77 233 w 06 245 66 130 156 w 07 164 126 129 178 w 08 137 147 66 247 t 09 161 83 131 222 w 10 19 331 49 198 y 11 597 0 0 0 A 12 287 310 0 0 m 13 0 0 560 37 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND1.DAP:M0663:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC004.DAP/M0664/AthalianaCistrome XX ID ANAC004.DAP:M0664:AthalianaCistrome XX NA ANAC004.DAP XX DE ANAC004.DAP XX OS Arabidopsis thaliana XX BF 17708; XX P0 A C G T 01 0 598 0 0 C 02 0 0 0 598 T 03 0 0 0 598 T 04 143 222 220 13 s 05 14 154 3 427 Y 06 79 102 89 328 t 07 48 283 55 212 y 08 156 127 95 220 w 09 325 57 195 21 r 10 0 360 19 219 y 11 598 0 0 0 A 12 598 0 0 0 A 13 0 0 598 0 G 14 38 145 46 369 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC004.DAP:M0664:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC058.ampDAP/M0665/AthalianaCistrome XX ID ANAC058.ampDAP:M0665:AthalianaCistrome XX NA ANAC058.ampDAP XX DE ANAC058.ampDAP XX OS Arabidopsis thaliana XX BF 8864; XX P0 A C G T 01 68 4 52 451 T 02 171 35 101 268 w 03 6 569 0 0 C 04 0 0 172 403 K 05 0 0 0 575 T 06 42 54 443 36 G 07 88 138 34 315 t 08 144 108 155 168 d 09 129 162 113 171 y 10 145 161 77 192 h 11 317 38 97 123 a 12 0 408 52 115 C 13 573 1 1 0 A 14 348 226 1 0 m 15 0 2 545 28 G 16 120 125 57 273 t 17 251 99 8 217 w 18 479 2 4 90 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC058.ampDAP:M0665:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CUC3.DAP/M0666/AthalianaCistrome XX ID CUC3.DAP:M0666:AthalianaCistrome XX NA CUC3.DAP XX DE CUC3.DAP XX OS Arabidopsis thaliana XX BF 12388; XX P0 A C G T 01 284 54 188 43 r 02 23 542 0 4 C 03 0 0 443 126 G 04 0 0 0 569 T 05 144 6 417 2 R 06 175 75 25 294 w 07 235 66 153 115 r 08 192 103 146 128 r 09 210 135 89 135 a 10 394 20 81 74 A 11 7 400 77 85 C 12 565 4 0 0 A 13 317 249 0 3 m 14 5 0 552 12 G 15 113 214 71 171 y 16 367 76 11 115 a 17 554 2 1 12 A 18 135 204 86 144 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CUC3.DAP:M0666:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC038.DAP/M0667/AthalianaCistrome XX ID ANAC038.DAP:M0667:AthalianaCistrome XX NA ANAC038.DAP XX DE ANAC038.DAP XX OS Arabidopsis thaliana XX BF 12235; XX P0 A C G T 01 48 3 3 546 T 02 217 4 85 294 w 03 337 12 180 71 r 04 23 574 3 0 C 05 1 0 358 241 k 06 0 0 0 600 T 07 81 27 492 0 G 08 92 99 24 385 t 09 175 66 189 170 d 10 143 90 200 167 k 11 162 145 136 157 w 12 342 36 92 130 a 13 28 388 73 111 c 14 545 2 13 40 A 15 343 216 35 6 m 16 25 1 552 22 G 17 170 111 77 242 w 18 292 107 16 185 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC038.DAP:M0667:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC045.ampDAP/M0668/AthalianaCistrome XX ID ANAC045.ampDAP:M0668:AthalianaCistrome XX NA ANAC045.ampDAP XX DE ANAC045.ampDAP XX OS Arabidopsis thaliana XX BF 17741; XX P0 A C G T 01 4 586 0 0 C 02 0 23 246 321 k 03 0 2 0 588 T 04 81 71 419 19 G 05 144 155 64 227 y 06 190 93 182 125 r 07 142 99 218 131 g 08 197 145 99 149 w 09 263 68 112 147 a 10 20 369 176 25 s 11 590 0 0 0 A 12 468 107 15 0 A 13 0 0 590 0 G 14 102 234 93 161 y 15 420 81 6 83 A 16 576 0 0 14 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC045.ampDAP:M0668:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC042.DAP/M0669/AthalianaCistrome XX ID ANAC042.DAP:M0669:AthalianaCistrome XX NA ANAC042.DAP XX DE ANAC042.DAP XX OS Arabidopsis thaliana XX BF 12236; XX P0 A C G T 01 11 290 1 298 y 02 87 5 392 116 g 03 66 417 94 23 C 04 0 600 0 0 C 05 0 3 593 4 G 06 0 1 101 498 T 07 181 126 186 107 r 08 181 105 144 170 w 09 171 160 76 193 h 10 178 164 108 150 h 11 136 113 131 220 t 12 122 214 65 199 y 13 143 164 118 175 y 14 314 271 5 10 m 15 28 529 34 9 C 16 14 0 563 23 G 17 48 214 140 198 y 18 131 231 6 232 y 19 354 8 192 46 r 20 68 253 32 247 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC042.DAP:M0669:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC034.DAP/M0670/AthalianaCistrome XX ID ANAC034.DAP:M0670:AthalianaCistrome XX NA ANAC034.DAP XX DE ANAC034.DAP XX OS Arabidopsis thaliana XX BF 17729; XX P0 A C G T 01 2 596 0 0 C 02 4 265 204 125 s 03 10 61 29 498 T 04 157 141 201 99 r 05 174 107 88 229 w 06 136 156 87 219 y 07 113 167 110 208 y 08 181 135 82 200 w 09 293 62 106 137 a 10 38 329 37 194 y 11 587 9 2 0 A 12 15 479 102 2 C 13 0 0 598 0 G 14 22 60 328 188 k 15 180 340 0 78 m 16 553 2 19 24 A 17 188 161 53 196 h 18 136 217 65 180 y 19 107 113 123 255 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC034.DAP:M0670:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL8.DAP/M0671/AthalianaCistrome XX ID NTL8.DAP:M0671:AthalianaCistrome XX NA NTL8.DAP XX DE NTL8.DAP XX OS Arabidopsis thaliana XX BF 12494; XX P0 A C G T 01 136 116 189 150 k 02 23 4 21 543 T 03 86 5 10 490 T 04 101 184 87 219 y 05 0 591 0 0 C 06 0 71 0 520 T 07 0 5 0 586 T 08 36 456 46 53 C 09 291 67 81 152 w 10 121 162 71 237 y 11 78 236 110 167 y 12 146 151 96 198 y 13 104 116 145 226 t 14 95 184 168 144 s 15 524 5 45 17 A 16 402 7 181 1 R 17 0 3 588 0 G 18 200 78 74 239 w 19 453 25 0 113 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL8.DAP:M0671:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC062.ampDAP/M0672/AthalianaCistrome XX ID ANAC062.ampDAP:M0672:AthalianaCistrome XX NA ANAC062.ampDAP XX DE ANAC062.ampDAP XX OS Arabidopsis thaliana XX BF 17737; XX P0 A C G T 01 0 597 0 0 C 02 0 0 1 596 T 03 0 0 0 597 T 04 274 265 48 10 m 05 255 84 122 136 a 06 78 174 70 275 y 07 93 269 96 139 c 08 201 130 138 128 a 09 56 193 193 155 b 10 17 172 44 364 y 11 597 0 0 0 A 12 597 0 0 0 A 13 0 0 596 1 G 14 143 116 105 233 t 15 390 55 16 136 a 16 414 4 4 175 W 17 126 186 52 233 y 18 142 218 87 150 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC062.ampDAP:M0672:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC013.DAP/M0673/AthalianaCistrome XX ID ANAC013.DAP:M0673:AthalianaCistrome XX NA ANAC013.DAP XX DE ANAC013.DAP XX OS Arabidopsis thaliana XX BF 12229; XX P0 A C G T 01 0 598 0 1 C 02 0 0 132 467 T 03 0 0 0 599 T 04 14 0 585 0 G 05 133 151 195 120 s 06 169 113 210 107 r 07 136 109 262 92 g 08 344 70 115 70 a 09 316 40 198 45 r 10 28 492 66 13 C 11 599 0 0 0 A 12 507 90 2 0 A 13 0 0 593 6 G 14 104 164 140 191 y 15 351 121 12 115 a 16 532 9 13 45 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC013.DAP:M0673:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC053.DAP/M0674/AthalianaCistrome XX ID ANAC053.DAP:M0674:AthalianaCistrome XX NA ANAC053.DAP XX DE ANAC053.DAP XX OS Arabidopsis thaliana XX BF 12240; XX P0 A C G T 01 19 0 0 579 T 02 73 0 77 448 T 03 139 34 69 356 t 04 0 597 0 1 C 05 1 1 48 548 T 06 0 0 0 598 T 07 14 0 584 0 G 08 128 133 166 171 k 09 204 79 236 79 r 10 126 147 231 94 g 11 356 99 103 40 a 12 397 15 159 27 r 13 11 485 70 32 C 14 598 0 0 0 A 15 504 93 0 1 A 16 0 0 591 7 G 17 217 89 48 244 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC053.DAP:M0674:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC057.ampDAP/M0675/AthalianaCistrome XX ID ANAC057.ampDAP:M0675:AthalianaCistrome XX NA ANAC057.ampDAP XX DE ANAC057.ampDAP XX OS Arabidopsis thaliana XX BF 12241; XX P0 A C G T 01 352 86 70 91 a 02 60 43 456 40 G 03 168 39 327 65 r 04 29 0 0 570 T 05 129 6 106 358 t 06 219 70 240 70 r 07 18 581 0 0 C 08 0 0 259 340 k 09 0 0 0 599 T 10 48 37 514 0 G 11 119 122 50 308 t 12 196 66 163 174 d 13 126 127 182 164 k 14 154 176 105 164 h 15 287 52 95 165 w 16 7 467 74 51 C 17 599 0 0 0 A 18 412 187 0 0 M 19 0 0 598 1 G 20 89 197 82 231 y 21 361 77 8 153 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC057.ampDAP:M0675:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC103.DAP/M0676/AthalianaCistrome XX ID ANAC103.DAP:M0676:AthalianaCistrome XX NA ANAC103.DAP XX DE ANAC103.DAP XX OS Arabidopsis thaliana XX BF 17763; XX P0 A C G T 01 123 70 339 68 g 02 225 32 256 87 r 03 257 4 9 330 w 04 463 0 129 8 A 05 451 3 130 16 A 06 0 598 1 1 C 07 1 3 100 496 T 08 0 1 0 599 T 09 5 25 556 14 G 10 123 160 158 159 b 11 131 65 166 238 k 12 127 101 239 133 g 13 250 115 65 170 w 14 201 143 156 100 r 15 12 537 25 26 C 16 600 0 0 0 A 17 490 110 0 0 A 18 2 0 586 12 G 19 66 135 94 305 t 20 153 179 11 257 h 21 454 9 39 98 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC103.DAP:M0676:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTM2.DAP/M0677/AthalianaCistrome XX ID NTM2.DAP:M0677:AthalianaCistrome XX NA NTM2.DAP XX DE NTM2.DAP XX OS Arabidopsis thaliana XX BF 12496; XX P0 A C G T 01 227 0 73 287 w 02 264 221 74 28 m 03 0 587 0 0 C 04 0 0 41 546 T 05 0 0 0 587 T 06 99 267 211 10 s 07 42 104 28 413 T 08 82 126 110 269 t 09 79 230 110 168 y 10 210 145 123 109 a 11 215 144 101 127 a 12 0 254 35 298 y 13 587 0 0 0 A 14 507 80 0 0 A 15 0 0 587 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTM2.DAP:M0677:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC046.DAP/M0678/AthalianaCistrome XX ID ANAC046.DAP:M0678:AthalianaCistrome XX NA ANAC046.DAP XX DE ANAC046.DAP XX OS Arabidopsis thaliana XX BF 8862; XX P0 A C G T 01 91 2 1 482 T 02 271 1 112 192 w 03 331 58 151 36 r 04 9 567 0 0 C 05 0 0 398 178 K 06 0 0 0 576 T 07 119 15 439 3 G 08 134 105 22 315 t 09 201 86 165 124 r 10 158 106 177 135 r 11 187 148 125 116 m 12 393 26 86 71 A 13 5 407 89 75 C 14 575 0 1 0 A 15 353 221 1 1 m 16 1 0 571 4 G 17 142 159 83 192 y 18 358 68 16 134 a 19 562 0 0 14 A 20 147 180 92 157 h 21 96 262 85 133 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC046.DAP:M0678:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAM.DAP/M0679/AthalianaCistrome XX ID NAM.DAP:M0679:AthalianaCistrome XX NA NAM.DAP XX DE NAM.DAP XX OS Arabidopsis thaliana XX BF 12490; XX P0 A C G T 01 166 29 60 333 w 02 159 16 140 273 w 03 169 103 167 149 d 04 63 457 0 68 C 05 61 63 325 139 g 06 146 15 58 369 t 07 185 97 212 94 r 08 168 93 43 284 w 09 171 144 79 194 w 10 147 144 113 184 w 11 173 126 111 178 w 12 322 52 73 141 a 13 32 315 59 182 y 14 588 0 0 0 A 15 2 586 0 0 C 16 0 0 588 0 G 17 20 138 130 300 t 18 399 161 0 28 m 19 462 14 6 106 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAM.DAP:M0679:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND2.ampDAP/M0680/AthalianaCistrome XX ID VND2.ampDAP:M0680:AthalianaCistrome XX NA VND2.ampDAP XX DE VND2.ampDAP XX OS Arabidopsis thaliana XX BF 17753; XX P0 A C G T 01 22 1 2 348 T 02 28 9 39 297 T 03 65 25 254 29 G 04 7 365 0 1 C 05 0 0 115 258 K 06 1 0 2 370 T 07 71 81 199 22 g 08 110 65 45 153 w 09 123 47 83 120 w 10 92 96 62 123 y 11 67 104 45 157 y 12 99 52 99 123 d 13 6 221 20 126 y 14 372 0 1 0 A 15 137 236 0 0 m 16 1 1 356 15 G 17 15 162 31 165 y 18 143 62 4 164 w 19 279 4 0 90 A 20 55 164 42 112 y 21 48 182 70 73 c 22 81 51 53 188 t 23 90 111 48 124 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND2.ampDAP:M0680:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTM1.ampDAP/M0681/AthalianaCistrome XX ID NTM1.ampDAP:M0681:AthalianaCistrome XX NA NTM1.ampDAP XX DE NTM1.ampDAP XX OS Arabidopsis thaliana XX BF 17755; XX P0 A C G T 01 318 85 87 108 a 02 274 99 115 110 a 03 309 94 83 112 a 04 367 54 83 94 a 05 349 55 116 78 a 06 358 47 104 89 a 07 337 48 131 82 a 08 289 68 115 126 a 09 224 94 160 120 r 10 166 137 176 119 r 11 405 72 68 53 a 12 484 0 15 99 A 13 598 0 0 0 A 14 598 0 0 0 A 15 546 0 52 0 A 16 0 0 598 0 G 17 25 166 11 396 y 18 380 17 121 80 a 19 382 43 111 62 a 20 327 115 57 99 a 21 300 54 87 157 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTM1.ampDAP:M0681:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC057.DAP/M0682/AthalianaCistrome XX ID ANAC057.DAP:M0682:AthalianaCistrome XX NA ANAC057.DAP XX DE ANAC057.DAP XX OS Arabidopsis thaliana XX BF 12241; XX P0 A C G T 01 207 7 112 274 w 02 286 44 230 40 r 03 22 578 0 0 C 04 0 0 323 277 k 05 0 0 0 600 T 06 76 15 506 3 G 07 140 126 42 292 t 08 179 90 189 142 r 09 135 106 205 154 k 10 179 164 97 160 h 11 311 58 104 127 a 12 4 456 103 37 C 13 600 0 0 0 A 14 442 158 0 0 M 15 0 0 600 0 G 16 110 223 115 152 y 17 428 92 8 72 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC057.DAP:M0682:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAP.DAP/M0683/AthalianaCistrome XX ID NAP.DAP:M0683:AthalianaCistrome XX NA NAP.DAP XX DE NAP.DAP XX OS Arabidopsis thaliana XX BF 11520; XX P0 A C G T 01 364 31 76 125 a 02 7 364 70 155 y 03 596 0 0 0 A 04 0 596 0 0 C 05 0 0 596 0 G 06 22 158 110 306 y 07 389 169 0 38 m 08 487 0 0 109 A 09 46 319 64 167 y 10 46 242 39 269 y 11 116 70 115 295 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAP.DAP:M0683:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC062.DAP/M0684/AthalianaCistrome XX ID ANAC062.DAP:M0684:AthalianaCistrome XX NA ANAC062.DAP XX DE ANAC062.DAP XX OS Arabidopsis thaliana XX BF 17737; XX P0 A C G T 01 0 598 0 0 C 02 0 0 0 598 T 03 0 0 0 598 T 04 359 57 163 19 r 05 142 187 204 65 s 06 132 157 83 226 y 07 115 94 236 153 k 08 266 109 149 74 a 09 134 99 74 291 t 10 4 19 226 349 k 11 598 0 0 0 A 12 598 0 0 0 A 13 0 0 597 1 G 14 104 104 156 234 k 15 504 11 0 83 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC062.DAP:M0684:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC075.DAP/M0685/AthalianaCistrome XX ID ANAC075.DAP:M0685:AthalianaCistrome XX NA ANAC075.DAP XX DE ANAC075.DAP XX OS Arabidopsis thaliana XX BF 12245; XX P0 A C G T 01 433 0 101 65 A 02 165 0 369 65 r 03 34 542 0 23 C 04 0 0 363 236 k 05 0 0 0 599 T 06 148 76 369 6 g 07 291 52 6 250 w 08 196 97 136 170 w 09 127 134 255 83 g 10 214 117 139 129 a 11 327 9 63 200 w 12 15 253 299 32 s 13 596 0 3 0 A 14 456 143 0 0 A 15 0 0 599 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC075.DAP:M0685:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC087.ampDAP/M0686/AthalianaCistrome XX ID ANAC087.ampDAP:M0686:AthalianaCistrome XX NA ANAC087.ampDAP XX DE ANAC087.ampDAP XX OS Arabidopsis thaliana XX BF 12246; XX P0 A C G T 01 68 102 288 59 g 02 129 67 232 89 g 03 80 1 10 426 T 04 192 17 139 169 d 05 266 57 150 44 r 06 7 508 0 2 C 07 0 0 446 71 G 08 0 0 0 517 T 09 135 5 377 0 R 10 133 117 52 215 w 11 141 100 154 122 r 12 111 120 183 103 g 13 144 114 134 125 r 14 245 53 100 119 a 15 33 302 121 61 c 16 490 5 22 0 A 17 283 215 19 0 m 18 12 5 483 17 G 19 89 141 150 137 b 20 221 134 25 137 h 21 404 13 30 70 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC087.ampDAP:M0686:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC017.DAP/M0687/AthalianaCistrome XX ID ANAC017.DAP:M0687:AthalianaCistrome XX NA ANAC017.DAP XX DE ANAC017.DAP XX OS Arabidopsis thaliana XX BF 12231; XX P0 A C G T 01 253 119 80 145 a 02 163 73 205 156 d 03 145 103 193 156 k 04 17 0 0 580 T 05 22 1 24 550 T 06 187 125 84 201 w 07 0 597 0 0 C 08 0 0 129 468 T 09 0 0 0 597 T 10 3 4 590 0 G 11 70 152 160 215 b 12 162 99 141 195 w 13 131 159 193 114 s 14 218 163 113 103 m 15 234 109 142 112 a 16 1 575 2 19 C 17 597 0 0 0 A 18 372 225 0 0 m 19 0 0 583 14 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC017.DAP:M0687:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND6.ampDAP/M0688/AthalianaCistrome XX ID VND6.ampDAP:M0688:AthalianaCistrome XX NA VND6.ampDAP XX DE VND6.ampDAP XX OS Arabidopsis thaliana XX BF 12537; XX P0 A C G T 01 79 0 22 499 T 02 91 2 501 6 G 03 13 587 0 0 C 04 0 0 233 367 k 05 0 0 0 600 T 06 109 109 325 57 g 07 180 96 78 246 w 08 177 67 168 188 d 09 115 138 127 220 t 10 113 126 70 291 t 11 133 82 119 266 t 12 11 296 69 224 y 13 600 0 0 0 A 14 332 267 1 0 m 15 2 0 574 24 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND6.ampDAP:M0688:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CUC2.DAP/M0689/AthalianaCistrome XX ID CUC2.DAP:M0689:AthalianaCistrome XX NA CUC2.DAP XX DE CUC2.DAP XX OS Arabidopsis thaliana XX BF 12387; XX P0 A C G T 01 12 569 0 2 C 02 0 0 428 155 K 03 0 0 0 583 T 04 114 0 469 0 G 05 121 83 28 351 t 06 177 70 190 146 d 07 181 84 184 134 r 08 187 107 133 156 w 09 348 23 106 106 a 10 11 403 83 86 C 11 577 0 0 6 A 12 365 211 6 1 m 13 0 0 574 9 G 14 145 146 100 192 y 15 362 80 11 130 a 16 551 2 0 30 A 17 160 195 79 149 h 18 107 252 83 141 c 19 141 83 152 207 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CUC2.DAP:M0689:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND3.DAP/M0690/AthalianaCistrome XX ID VND3.DAP:M0690:AthalianaCistrome XX NA VND3.DAP XX DE VND3.DAP XX OS Arabidopsis thaliana XX BF 12535; XX P0 A C G T 01 10 578 0 0 C 02 0 0 262 326 k 03 0 0 0 588 T 04 246 39 290 13 r 05 237 128 92 131 a 06 280 58 138 112 a 07 206 106 147 129 r 08 204 118 82 184 w 09 237 60 94 197 w 10 62 281 158 87 s 11 587 1 0 0 A 12 482 106 0 0 A 13 0 0 584 4 G 14 50 425 38 75 C 15 503 15 5 65 A 16 571 0 0 17 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND3.DAP:M0690:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC103.ampDAP/M0691/AthalianaCistrome XX ID ANAC103.ampDAP:M0691:AthalianaCistrome XX NA ANAC103.ampDAP XX DE ANAC103.ampDAP XX OS Arabidopsis thaliana XX BF 17763; XX P0 A C G T 01 0 0 65 532 T 02 0 0 0 597 T 03 18 29 528 22 G 04 116 160 139 182 y 05 171 65 109 252 w 06 110 256 91 140 c 07 237 161 64 135 m 08 172 163 131 131 m 09 15 531 32 19 C 10 597 0 0 0 A 11 479 117 1 0 A 12 0 0 582 15 G 13 18 147 10 422 T 14 8 128 0 461 T 15 301 5 4 287 w 16 68 246 41 242 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC103.ampDAP:M0691:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC VND3.ampDAP/M0692/AthalianaCistrome XX ID VND3.ampDAP:M0692:AthalianaCistrome XX NA VND3.ampDAP XX DE VND3.ampDAP XX OS Arabidopsis thaliana XX BF 12535; XX P0 A C G T 01 7 580 0 0 C 02 0 0 239 348 k 03 0 0 0 587 T 04 221 42 304 20 r 05 236 124 95 132 a 06 272 68 146 101 a 07 204 109 150 124 r 08 197 114 80 196 w 09 225 76 104 182 w 10 56 295 155 81 s 11 584 3 0 0 A 12 475 112 0 0 A 13 0 0 583 4 G 14 35 435 32 85 C 15 500 18 14 55 A 16 569 0 0 18 A 17 97 222 97 171 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=VND3.ampDAP:M0692:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CUC1.DAP/M0693/AthalianaCistrome XX ID CUC1.DAP:M0693:AthalianaCistrome XX NA CUC1.DAP XX DE CUC1.DAP XX OS Arabidopsis thaliana XX BF 12386; XX P0 A C G T 01 6 571 0 0 C 02 0 0 345 232 k 03 0 0 0 577 T 04 125 25 427 0 G 05 96 117 31 333 t 06 163 95 152 167 d 07 146 107 180 144 r 08 203 129 115 130 a 09 325 46 96 110 a 10 14 387 90 86 c 11 571 2 0 4 A 12 393 182 1 1 M 13 0 0 577 0 G 14 127 143 86 221 t 15 364 81 7 125 a 16 544 1 0 32 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CUC1.DAP:M0693:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC079.DAP/M0694/AthalianaCistrome XX ID ANAC079.DAP:M0694:AthalianaCistrome XX NA ANAC079.DAP XX DE ANAC079.DAP XX OS Arabidopsis thaliana XX BF 12094; XX P0 A C G T 01 182 47 251 81 r 02 78 0 0 483 T 03 231 3 81 246 w 04 298 27 198 38 r 05 13 548 0 0 C 06 0 0 389 172 K 07 0 0 0 561 T 08 104 8 449 0 G 09 104 81 22 354 t 10 202 55 167 137 r 11 131 90 184 156 k 12 200 115 133 113 a 13 353 17 97 94 a 14 18 350 101 92 c 15 540 2 1 18 A 16 351 201 7 2 m 17 4 0 546 11 G 18 137 133 92 199 t 19 350 89 11 111 a 20 533 2 1 25 A 21 165 169 84 143 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC079.DAP:M0694:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAM.ampDAP/M0695/AthalianaCistrome XX ID NAM.ampDAP:M0695:AthalianaCistrome XX NA NAM.ampDAP XX DE NAM.ampDAP XX OS Arabidopsis thaliana XX BF 12490; XX P0 A C G T 01 351 45 86 112 a 02 17 362 58 157 y 03 594 0 0 0 A 04 0 594 0 0 C 05 0 0 594 0 G 06 20 170 116 288 y 07 390 172 0 32 m 08 471 0 0 123 A 09 49 339 66 140 c 10 43 241 34 276 y 11 130 71 135 258 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAM.ampDAP:M0695:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC092.DAP/M0696/AthalianaCistrome XX ID ANAC092.DAP:M0696:AthalianaCistrome XX NA ANAC092.DAP XX DE ANAC092.DAP XX OS Arabidopsis thaliana XX BF 11526; XX P0 A C G T 01 9 581 0 0 C 02 1 0 359 230 k 03 1 0 0 589 T 04 122 5 462 1 G 05 115 126 47 302 t 06 208 128 147 107 a 07 174 156 166 94 v 08 229 159 92 110 m 09 405 27 77 81 A 10 5 422 102 61 C 11 590 0 0 0 A 12 327 263 0 0 m 13 2 0 574 14 G 14 59 256 38 237 y 15 396 39 0 155 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC092.DAP:M0696:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CUC2.ampDAP/M0697/AthalianaCistrome XX ID CUC2.ampDAP:M0697:AthalianaCistrome XX NA CUC2.ampDAP XX DE CUC2.ampDAP XX OS Arabidopsis thaliana XX BF 12387; XX P0 A C G T 01 95 3 1 482 T 02 247 0 130 204 w 03 331 69 144 37 a 04 10 570 0 1 C 05 2 0 394 185 k 06 0 0 0 581 T 07 139 14 425 3 G 08 141 104 25 311 t 09 190 86 162 143 r 10 170 105 169 137 r 11 193 147 115 126 m 12 387 27 83 84 a 13 6 454 68 53 C 14 581 0 0 0 A 15 345 236 0 0 m 16 0 0 571 10 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CUC2.ampDAP:M0697:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC087.DAP/M0698/AthalianaCistrome XX ID ANAC087.DAP:M0698:AthalianaCistrome XX NA ANAC087.DAP XX DE ANAC087.DAP XX OS Arabidopsis thaliana XX BF 12246; XX P0 A C G T 01 85 2 1 487 T 02 240 5 101 229 w 03 309 59 163 44 r 04 11 564 0 0 C 05 0 0 415 160 K 06 0 0 0 575 T 07 122 6 447 0 G 08 114 112 23 326 t 09 184 95 177 119 r 10 162 94 181 138 r 11 186 144 112 133 m 12 376 22 78 99 a 13 10 399 91 75 C 14 569 0 1 5 A 15 385 190 0 0 m 16 0 0 573 2 G 17 137 141 82 215 t 18 349 73 9 144 w 19 555 0 0 20 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC087.DAP:M0698:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC096.ampDAP/M0699/AthalianaCistrome XX ID ANAC096.ampDAP:M0699:AthalianaCistrome XX NA ANAC096.ampDAP XX DE ANAC096.ampDAP XX OS Arabidopsis thaliana XX BF 12248; XX P0 A C G T 01 0 590 0 0 C 02 0 0 54 536 T 03 0 0 0 590 T 04 61 201 284 44 s 05 243 91 62 194 w 06 176 112 147 155 w 07 123 180 139 148 y 08 156 142 101 191 w 09 165 82 113 230 w 10 34 313 131 112 c 11 589 1 0 0 A 12 430 160 0 0 M 13 0 0 587 3 G 14 90 204 51 245 y 15 481 32 0 77 A 16 573 0 0 17 A 17 61 342 22 165 y 18 28 462 7 93 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC096.ampDAP:M0699:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CUC3.ampDAP/M0700/AthalianaCistrome XX ID CUC3.ampDAP:M0700:AthalianaCistrome XX NA CUC3.ampDAP XX DE CUC3.ampDAP XX OS Arabidopsis thaliana XX BF 12388; XX P0 A C G T 01 13 545 0 3 C 02 3 0 268 290 k 03 0 0 4 557 T 04 85 76 392 8 G 05 94 68 22 377 t 06 150 95 126 190 w 07 141 181 88 151 h 08 111 169 69 212 y 09 276 33 93 159 w 10 7 412 11 131 C 11 561 0 0 0 A 12 120 441 0 0 C 13 8 0 531 22 G 14 33 209 64 255 y 15 181 130 7 243 w 16 443 4 5 109 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CUC3.ampDAP:M0700:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC016.ampDAP/M0701/AthalianaCistrome XX ID ANAC016.ampDAP:M0701:AthalianaCistrome XX NA ANAC016.ampDAP XX DE ANAC016.ampDAP XX OS Arabidopsis thaliana XX BF 17719; XX P0 A C G T 01 0 593 0 0 C 02 0 0 205 388 k 03 0 0 0 593 T 04 0 0 593 0 G 05 83 196 197 117 s 06 238 101 118 136 a 07 96 116 269 112 g 08 258 160 128 47 m 09 235 90 123 145 a 10 1 566 9 17 C 11 593 0 0 0 A 12 302 291 0 0 m 13 1 0 576 16 G 14 36 181 155 221 b 15 416 117 0 60 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC016.ampDAP:M0701:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAP.ampDAP/M0702/AthalianaCistrome XX ID NAP.ampDAP:M0702:AthalianaCistrome XX NA NAP.ampDAP XX DE NAP.ampDAP XX OS Arabidopsis thaliana XX BF 11520; XX P0 A C G T 01 59 0 0 363 T 02 52 2 132 236 k 03 214 77 101 30 a 04 3 417 0 2 C 05 0 0 412 10 G 06 0 1 6 415 T 07 119 38 246 19 r 08 110 48 46 218 w 09 139 75 91 117 w 10 92 86 118 126 k 11 134 65 90 133 w 12 199 26 69 128 w 13 24 185 78 135 y 14 392 9 3 18 A 15 77 330 11 4 C 16 0 0 416 6 G 17 71 100 126 125 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAP.ampDAP:M0702:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC079.ampDAP/M0703/AthalianaCistrome XX ID ANAC079.ampDAP:M0703:AthalianaCistrome XX NA ANAC079.ampDAP XX DE ANAC079.ampDAP XX OS Arabidopsis thaliana XX BF 12094; XX P0 A C G T 01 87 391 26 87 c 02 63 78 168 282 k 03 153 31 29 378 w 04 178 115 223 75 r 05 160 135 56 240 w 06 153 131 90 217 w 07 148 138 102 203 w 08 190 166 56 179 h 09 476 11 39 65 A 10 18 518 15 40 C 11 574 17 0 0 A 12 89 502 0 0 C 13 1 0 587 3 G 14 20 359 36 176 y 15 380 83 3 125 a 16 558 2 0 31 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC079.ampDAP:M0703:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G19040.DAP/M0704/AthalianaCistrome XX ID AT1G19040.DAP:M0704:AthalianaCistrome XX NA AT1G19040.DAP XX DE AT1G19040.DAP XX OS Arabidopsis thaliana XX BF 12261; XX P0 A C G T 01 198 0 7 376 w 02 324 3 85 169 w 03 343 46 158 34 r 04 3 577 0 1 C 05 0 0 130 451 T 06 0 0 0 581 T 07 22 8 551 0 G 08 114 166 204 97 s 09 198 54 243 86 r 10 103 103 298 77 g 11 184 184 74 139 m 12 151 121 200 109 r 13 16 534 19 12 C 14 581 0 0 0 A 15 500 81 0 0 A 16 0 0 581 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G19040.DAP:M0704:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC038.ampDAP/M0705/AthalianaCistrome XX ID ANAC038.ampDAP:M0705:AthalianaCistrome XX NA ANAC038.ampDAP XX DE ANAC038.ampDAP XX OS Arabidopsis thaliana XX BF 12235; XX P0 A C G T 01 101 37 213 62 g 02 131 31 171 80 r 03 77 7 6 323 T 04 191 2 70 150 w 05 244 27 78 64 a 06 33 379 0 1 C 07 0 8 182 223 k 08 4 4 0 405 T 09 109 16 269 19 r 10 97 87 23 206 t 11 137 45 114 117 d 12 133 92 70 118 w 13 98 114 65 136 y 14 264 34 52 63 a 15 13 320 48 32 C 16 407 0 2 4 A 17 343 70 0 0 A 18 6 0 405 2 G 19 164 68 30 151 w 20 305 34 6 68 A 21 384 7 1 21 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC038.ampDAP:M0705:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC094.DAP/M0706/AthalianaCistrome XX ID ANAC094.DAP:M0706:AthalianaCistrome XX NA ANAC094.DAP XX DE ANAC094.DAP XX OS Arabidopsis thaliana XX BF 17765; XX P0 A C G T 01 20 255 12 264 y 02 112 4 301 134 g 03 80 378 55 38 C 04 0 551 0 0 C 05 0 0 547 4 G 06 0 5 35 511 T 07 160 105 210 76 r 08 169 98 125 159 w 09 136 164 76 175 y 10 116 178 105 152 y 11 121 104 125 201 t 12 105 192 59 195 y 13 108 244 81 118 c 14 421 130 0 0 A 15 2 544 5 0 C 16 0 0 549 2 G 17 30 162 154 205 b 18 120 197 15 219 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC094.DAP:M0706:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SND2.DAP/M0707/AthalianaCistrome XX ID SND2.DAP:M0707:AthalianaCistrome XX NA SND2.DAP XX DE SND2.DAP XX OS Arabidopsis thaliana XX BF 12511; XX P0 A C G T 01 2 588 0 7 C 02 3 0 119 475 T 03 0 4 1 592 T 04 80 270 232 15 s 05 191 61 24 321 w 06 107 143 113 234 t 07 111 237 130 119 c 08 146 155 75 221 y 09 252 16 28 301 w 10 12 350 71 164 y 11 588 5 0 4 A 12 264 333 0 0 m 13 40 0 500 57 G 14 48 343 32 174 y 15 150 132 2 313 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SND2.DAP:M0707:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC013.ampDAP/M0708/AthalianaCistrome XX ID ANAC013.ampDAP:M0708:AthalianaCistrome XX NA ANAC013.ampDAP XX DE ANAC013.ampDAP XX OS Arabidopsis thaliana XX BF 12229; XX P0 A C G T 01 149 29 118 148 d 02 80 11 3 350 T 03 112 2 84 246 w 04 183 89 102 70 a 05 0 444 0 0 C 06 0 0 89 355 T 07 0 0 0 444 T 08 2 0 442 0 G 09 77 117 155 95 s 10 137 97 128 82 r 11 91 42 227 84 g 12 249 71 81 43 a 13 209 37 146 52 r 14 18 375 38 13 C 15 444 0 0 0 A 16 362 80 2 0 A 17 0 0 441 3 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC013.ampDAP:M0708:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CUC1.ampDAP/M0709/AthalianaCistrome XX ID CUC1.ampDAP:M0709:AthalianaCistrome XX NA CUC1.ampDAP XX DE CUC1.ampDAP XX OS Arabidopsis thaliana XX BF 12386; XX P0 A C G T 01 134 28 21 44 a 02 28 23 148 28 g 03 62 31 95 39 r 04 22 2 2 201 T 05 89 3 49 86 w 06 107 24 86 10 r 07 1 226 0 0 C 08 0 0 199 28 G 09 0 0 0 227 T 10 42 0 185 0 G 11 33 43 2 149 t 12 65 23 63 76 d 13 69 43 71 44 r 14 76 50 49 52 a 15 111 26 37 53 a 16 5 141 40 41 c 17 227 0 0 0 A 18 159 68 0 0 M 19 0 0 225 2 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CUC1.ampDAP:M0709:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC011.DAP/M0710/AthalianaCistrome XX ID ANAC011.DAP:M0710:AthalianaCistrome XX NA ANAC011.DAP XX DE ANAC011.DAP XX OS Arabidopsis thaliana XX BF 17716; XX P0 A C G T 01 58 21 122 27 r 02 21 1 1 205 T 03 58 4 25 141 w 04 105 27 59 37 r 05 0 228 0 0 C 06 1 0 46 181 T 07 0 1 0 227 T 08 23 24 181 0 G 09 56 71 16 85 y 10 79 30 70 49 r 11 57 23 85 63 d 12 56 68 40 64 y 13 93 31 42 62 w 14 21 85 98 24 s 15 226 0 2 0 A 16 217 11 0 0 A 17 0 0 228 0 G 18 55 124 6 43 c 19 220 2 0 6 A 20 227 0 0 1 A 21 32 125 17 54 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC011.DAP:M0710:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G12910.DAP/M0711/AthalianaCistrome XX ID AT3G12910.DAP:M0711:AthalianaCistrome XX NA AT3G12910.DAP XX DE AT3G12910.DAP XX OS Arabidopsis thaliana XX BF 10126; XX P0 A C G T 01 0 43 0 54 y 02 8 0 79 10 G 03 0 60 35 2 s 04 0 94 0 3 C 05 0 0 95 2 G 06 0 0 26 71 K 07 25 23 34 15 r 08 44 10 26 17 r 09 41 15 19 22 a 10 25 10 27 35 d 11 31 12 21 33 w 12 23 36 6 32 y 13 16 24 35 22 g 14 65 32 0 0 m 15 0 96 1 0 C 16 0 0 97 0 G 17 3 20 43 31 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G12910.DAP:M0711:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FRS9.ampDAP/M0712/AthalianaCistrome XX ID FRS9.ampDAP:M0712:AthalianaCistrome XX NA FRS9.ampDAP XX DE FRS9.ampDAP XX OS Arabidopsis thaliana XX BF 12406; XX P0 A C G T 01 0 0 1 16 T 02 1 0 2 14 T 03 7 0 9 1 r 04 16 0 1 0 A 05 15 1 0 1 A 06 0 0 0 17 T 07 17 0 0 0 A 08 0 2 0 15 T 09 0 6 0 11 y 10 14 0 1 2 A 11 0 0 0 17 T 12 0 0 0 17 T 13 2 1 14 0 G 14 4 0 13 0 G 15 1 1 0 15 T 16 0 0 0 17 T 17 0 0 0 17 T 18 16 0 0 1 A 19 7 1 8 1 r 20 17 0 0 0 A 21 10 0 6 1 r 22 1 1 1 14 T 23 1 1 0 15 T 24 16 0 1 0 A 25 4 0 0 13 T 26 12 0 1 4 A 27 13 0 4 0 A 28 12 1 2 2 A 29 17 0 0 0 A 30 17 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FRS9.ampDAP:M0712:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FRS9.DAP/M0713/AthalianaCistrome XX ID FRS9.DAP:M0713:AthalianaCistrome XX NA FRS9.DAP XX DE FRS9.DAP XX OS Arabidopsis thaliana XX BF 12406; XX P0 A C G T 01 69 402 10 94 C 02 40 72 8 455 T 03 52 431 10 82 C 04 74 48 0 453 T 05 23 453 42 57 C 06 25 46 11 493 T 07 16 426 7 126 C 08 28 35 1 511 T 09 16 531 0 28 C 10 3 14 0 558 T 11 16 522 0 37 C 12 4 1 0 570 T 13 2 527 0 46 C 14 2 7 0 566 T 15 0 567 8 0 C 16 18 48 0 509 T 17 38 393 21 123 C 18 17 117 13 428 T 19 52 436 13 74 C 20 34 69 18 454 T 21 42 404 10 119 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FRS9.DAP:M0713:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G28920.DAP/M0714/AthalianaCistrome XX ID AT2G28920.DAP:M0714:AthalianaCistrome XX NA AT2G28920.DAP XX DE AT2G28920.DAP XX OS Arabidopsis thaliana XX BF 12280; XX P0 A C G T 01 224 119 125 116 a 02 320 45 49 170 w 03 545 0 11 28 A 04 580 0 0 4 A 05 580 0 4 0 A 06 1 0 0 583 T 07 584 0 0 0 A 08 0 0 0 584 T 09 0 584 0 0 C 10 59 45 5 475 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G28920.DAP:M0714:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL95.DAP/M0715/AthalianaCistrome XX ID AGL95.DAP:M0715:AthalianaCistrome XX NA AGL95.DAP XX DE AGL95.DAP XX OS Arabidopsis thaliana XX BF 12225; XX P0 A C G T 01 359 42 147 47 a 02 22 7 556 10 G 03 562 6 15 12 A 04 542 4 13 36 A 05 61 116 331 87 g 06 145 241 128 81 c 07 84 20 9 482 T 08 22 3 10 560 T 09 8 562 11 14 C 10 30 84 44 437 T 11 454 23 105 13 A 12 8 9 568 10 G 13 543 15 13 24 A 14 431 28 62 74 A 15 136 130 234 95 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL95.DAP:M0715:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ASHR1.DAP/M0716/AthalianaCistrome XX ID ASHR1.DAP:M0716:AthalianaCistrome XX NA ASHR1.DAP XX DE ASHR1.DAP XX OS Arabidopsis thaliana XX BF 12255; XX P0 A C G T 01 67 67 32 104 t 02 50 91 39 90 y 03 93 54 58 65 a 04 64 53 49 104 t 05 43 134 40 53 c 06 112 50 38 70 w 07 10 2 0 258 T 08 0 270 0 0 C 09 270 0 0 0 A 10 0 268 0 2 C 11 0 270 0 0 C 12 270 0 0 0 A 13 56 60 38 116 t 14 55 97 51 67 c 15 111 52 48 59 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ASHR1.DAP:M0716:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtNLP4.DAP/M0717/AthalianaCistrome XX ID AtNLP4.DAP:M0717:AthalianaCistrome XX NA AtNLP4.DAP XX DE AtNLP4.DAP XX OS Arabidopsis thaliana XX BF 12372; XX P0 A C G T 01 94 56 122 93 d 02 96 118 55 96 h 03 174 43 48 100 w 04 48 41 229 47 g 05 0 362 0 3 C 06 360 0 5 0 A 07 3 0 362 0 G 08 0 365 0 0 C 09 360 0 4 1 A 10 80 47 196 42 g 11 74 159 70 62 c 12 134 52 92 87 r 13 102 44 144 75 r 14 58 130 93 84 s 15 130 89 88 58 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtNLP4.DAP:M0717:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BBX31.DAP/M0718/AthalianaCistrome XX ID BBX31.DAP:M0718:AthalianaCistrome XX NA BBX31.DAP XX DE BBX31.DAP XX OS Arabidopsis thaliana XX BF 12374; XX P0 A C G T 01 477 26 66 31 A 02 483 1 1 115 A 03 600 0 0 0 A 04 600 0 0 0 A 05 548 0 52 0 A 06 0 0 600 0 G 07 118 94 66 322 t 08 342 23 95 140 a 09 464 1 114 21 A 10 460 27 51 62 A 11 426 25 44 105 A 12 374 15 120 91 a 13 279 54 149 118 a 14 232 75 131 162 w 15 301 31 112 156 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BBX31.DAP:M0718:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G24250.DAP/M0719/AthalianaCistrome XX ID AT1G24250.DAP:M0719:AthalianaCistrome XX NA AT1G24250.DAP XX DE AT1G24250.DAP XX OS Arabidopsis thaliana XX BF 12264; XX P0 A C G T 01 96 97 65 209 t 02 98 173 35 161 y 03 82 189 46 150 y 04 30 308 10 119 y 05 461 2 0 4 A 06 350 82 10 25 A 07 0 451 0 16 C 08 78 100 9 280 t 09 295 70 44 58 a 10 65 343 27 32 C 11 32 325 0 110 C 12 438 3 3 23 A 13 339 118 0 10 M 14 9 451 6 1 C 15 103 173 17 174 y 16 338 26 82 21 A 17 163 212 14 78 m 18 133 176 5 153 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G24250.DAP:M0719:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G23810.DAP/M0720/AthalianaCistrome XX ID AT1G23810.DAP:M0720:AthalianaCistrome XX NA AT1G23810.DAP XX DE AT1G23810.DAP XX OS Arabidopsis thaliana XX BF 12263; XX P0 A C G T 01 40 25 11 283 T 02 0 2 1 356 T 03 0 359 0 0 C 04 0 50 4 305 T 05 325 8 26 0 A 06 0 0 359 0 G 07 358 0 0 1 A 08 314 3 11 31 A 09 73 71 144 71 g 10 38 221 70 30 c 11 16 4 0 339 T 12 4 3 0 352 T 13 0 358 1 0 C 14 16 91 22 230 y 15 135 67 67 90 w 16 84 79 77 119 t 17 154 37 59 109 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G23810.DAP:M0720:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G01818.DAP/M0721/AthalianaCistrome XX ID AT2G01818.DAP:M0721:AthalianaCistrome XX NA AT2G01818.DAP XX DE AT2G01818.DAP XX OS Arabidopsis thaliana XX BF 12275; XX P0 A C G T 01 348 42 185 25 r 02 3 4 593 0 G 03 581 3 2 14 A 04 553 5 10 32 A 05 45 143 330 82 g 06 173 202 113 112 m 07 59 25 7 509 T 08 8 0 4 588 T 09 2 591 3 4 C 10 0 85 28 487 T 11 467 22 110 1 A 12 1 6 593 0 G 13 576 4 5 15 A 14 420 34 66 80 A 15 149 112 227 112 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G01818.DAP:M0721:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAV1.DAP/M0722/AthalianaCistrome XX ID RAV1.DAP:M0722:AthalianaCistrome XX NA RAV1.DAP XX DE RAV1.DAP XX OS Arabidopsis thaliana XX BF 1274; XX P0 A C G T 01 202 274 92 22 m 02 275 0 110 205 w 03 98 105 286 101 g 04 287 25 195 83 r 05 70 42 73 405 T 06 227 18 191 154 d 07 228 45 110 207 w 08 157 34 30 369 w 09 99 94 11 386 t 10 81 22 19 468 T 11 112 277 24 177 y 12 0 8 0 582 T 13 0 0 590 0 G 14 11 27 5 547 T 15 8 11 32 539 T 16 9 8 508 65 G 17 73 159 161 197 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAV1.DAP:M0722:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAV1.ampDAP/M0723/AthalianaCistrome XX ID RAV1.ampDAP:M0723:AthalianaCistrome XX NA RAV1.ampDAP XX DE RAV1.ampDAP XX OS Arabidopsis thaliana XX BF 1274; XX P0 A C G T 01 126 107 120 238 t 02 132 93 89 277 t 03 140 140 71 240 t 04 108 201 50 232 y 05 178 323 67 23 m 06 326 1 125 139 a 07 94 62 348 87 g 08 228 23 241 99 r 09 89 44 78 380 t 10 200 17 223 151 d 11 226 44 101 220 w 12 163 42 25 361 w 13 109 92 13 377 t 14 85 28 20 458 T 15 118 278 32 163 y 16 0 9 0 582 T 17 2 0 589 0 G 18 22 27 3 539 T 19 7 17 38 529 T 20 24 15 481 71 G 21 74 147 153 217 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAV1.ampDAP:M0723:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC REM19.ampDAP/M0724/AthalianaCistrome XX ID REM19.ampDAP:M0724:AthalianaCistrome XX NA REM19.ampDAP XX DE REM19.ampDAP XX OS Arabidopsis thaliana XX BF 12506; XX P0 A C G T 01 226 30 84 212 w 02 148 65 14 325 w 03 111 50 201 190 k 04 253 60 104 135 a 05 248 214 36 54 m 06 403 136 13 0 A 07 499 43 1 9 A 08 498 10 32 12 A 09 481 61 9 1 A 10 534 2 16 0 A 11 523 2 13 14 A 12 535 3 0 14 A 13 519 14 13 6 A 14 540 0 4 8 A 15 504 6 22 20 A 16 489 44 19 0 A 17 471 1 35 45 A 18 392 47 34 79 A 19 333 102 90 27 a 20 349 23 24 156 w 21 235 105 104 108 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=REM19.ampDAP:M0724:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC REM19.DAP/M0725/AthalianaCistrome XX ID REM19.DAP:M0725:AthalianaCistrome XX NA REM19.DAP XX DE REM19.DAP XX OS Arabidopsis thaliana XX BF 12506; XX P0 A C G T 01 287 90 186 10 r 02 333 139 46 55 a 03 289 221 63 0 m 04 476 31 66 0 A 05 451 26 96 0 A 06 569 3 0 1 A 07 480 61 7 25 A 08 571 1 0 1 A 09 523 44 0 6 A 10 549 0 3 21 A 11 490 16 9 58 A 12 526 6 41 0 A 13 387 32 34 120 a 14 394 120 59 0 A 15 383 51 87 52 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=REM19.DAP:M0725:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G31460.DAP/M0726/AthalianaCistrome XX ID AT2G31460.DAP:M0726:AthalianaCistrome XX NA AT2G31460.DAP XX DE AT2G31460.DAP XX OS Arabidopsis thaliana XX BF 12281; XX P0 A C G T 01 55 17 48 44 d 02 78 14 26 46 w 03 75 8 37 44 w 04 3 3 157 1 G 05 162 0 2 0 A 06 164 0 0 0 A 07 164 0 0 0 A 08 1 0 0 163 T 09 0 0 163 1 G 10 155 6 1 2 A 11 60 6 5 93 w 12 64 13 54 33 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G31460.DAP:M0726:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RKD2.ampDAP/M0727/AthalianaCistrome XX ID RKD2.ampDAP:M0727:AthalianaCistrome XX NA RKD2.ampDAP XX DE RKD2.ampDAP XX OS Arabidopsis thaliana XX BF 12507; XX P0 A C G T 01 136 1 454 9 G 02 13 1 575 11 G 03 474 9 83 34 A 04 590 4 0 6 A 05 74 17 400 109 g 06 240 149 56 155 w 07 0 223 38 339 y 08 40 101 446 13 G 09 561 0 28 11 A 10 588 0 8 4 A 11 251 105 170 74 r 12 226 269 104 1 m 13 1 0 599 0 G 14 130 31 63 376 t 15 0 518 0 82 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RKD2.ampDAP:M0727:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RKD2.DAP/M0728/AthalianaCistrome XX ID RKD2.DAP:M0728:AthalianaCistrome XX NA RKD2.DAP XX DE RKD2.DAP XX OS Arabidopsis thaliana XX BF 12507; XX P0 A C G T 01 145 123 206 113 g 02 121 168 73 225 y 03 108 1 468 10 G 04 358 79 38 112 a 05 0 584 0 3 C 06 2 114 266 205 k 07 76 155 118 238 y 08 9 10 0 568 T 09 9 30 0 548 T 10 13 448 87 39 C 11 310 40 233 4 r 12 141 65 143 238 t 13 106 403 18 60 C 14 0 0 9 578 T 15 41 97 9 440 T 16 11 559 5 12 C 17 12 426 4 145 C 18 92 217 53 225 y 19 133 210 91 153 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RKD2.DAP:M0728:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NLP7.DAP/M0729/AthalianaCistrome XX ID NLP7.DAP:M0729:AthalianaCistrome XX NA NLP7.DAP XX DE NLP7.DAP XX OS Arabidopsis thaliana XX BF 12493; XX P0 A C G T 01 266 65 70 194 w 02 203 77 98 217 w 03 178 53 109 255 w 04 6 108 1 480 T 05 39 0 556 0 G 06 196 104 202 93 r 07 0 595 0 0 C 08 0 264 24 307 y 09 11 232 13 339 y 10 6 48 0 541 T 11 23 9 0 563 T 12 59 281 192 63 s 13 238 67 247 43 r 14 182 73 209 131 r 15 206 73 167 149 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NLP7.DAP:M0729:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G09735.DAP/M0730/AthalianaCistrome XX ID AT3G09735.DAP:M0730:AthalianaCistrome XX NA AT3G09735.DAP XX DE AT3G09735.DAP XX OS Arabidopsis thaliana XX BF 12285; XX P0 A C G T 01 331 46 197 24 r 02 0 0 598 0 G 03 592 1 1 4 A 04 564 0 4 30 A 05 40 130 358 70 g 06 155 217 120 106 m 07 59 22 10 507 T 08 8 0 2 588 T 09 0 595 3 0 C 10 0 84 20 494 T 11 466 19 112 1 A 12 0 3 595 0 G 13 586 3 2 7 A 14 414 26 79 79 A 15 150 114 225 109 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G09735.DAP:M0730:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL5.ampDAP/M0731/AthalianaCistrome XX ID SPL5.ampDAP:M0731:AthalianaCistrome XX NA SPL5.ampDAP XX DE SPL5.ampDAP XX OS Arabidopsis thaliana XX BF 11682; XX P0 A C G T 01 137 100 129 234 t 02 75 110 94 321 t 03 1 0 599 0 G 04 2 0 0 598 T 05 600 0 0 0 A 06 0 600 0 0 C 07 41 0 558 1 G 08 46 0 457 97 G 09 402 48 5 145 a 10 148 187 73 192 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL5.ampDAP:M0731:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL9.ampDAP/M0733/AthalianaCistrome XX ID SPL9.ampDAP:M0733:AthalianaCistrome XX NA SPL9.ampDAP XX DE SPL9.ampDAP XX OS Arabidopsis thaliana XX BF 12515; XX P0 A C G T 01 267 79 90 164 w 02 240 72 127 161 w 03 124 106 87 283 t 04 25 104 50 421 T 05 0 0 600 0 G 06 1 2 0 597 T 07 599 0 0 1 A 08 0 600 0 0 C 09 0 1 476 123 G 10 38 3 450 109 G 11 436 48 24 92 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL9.ampDAP:M0733:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL15.ampDAP/M0734/AthalianaCistrome XX ID SPL15.ampDAP:M0734:AthalianaCistrome XX NA SPL15.ampDAP XX DE SPL15.ampDAP XX OS Arabidopsis thaliana XX BF 12514; XX P0 A C G T 01 228 81 74 205 w 02 176 102 94 216 w 03 141 122 102 223 t 04 109 127 109 243 t 05 148 9 248 183 d 06 51 0 7 530 T 07 7 580 0 1 C 08 8 580 0 0 C 09 0 0 588 0 G 10 0 0 0 588 T 11 588 0 0 0 A 12 0 588 0 0 C 13 459 20 87 22 A 14 296 77 122 93 a 15 148 98 53 289 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL15.ampDAP:M0734:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL1.ampDAP/M0735/AthalianaCistrome XX ID SPL1.ampDAP:M0735:AthalianaCistrome XX NA SPL1.ampDAP XX DE SPL1.ampDAP XX OS Arabidopsis thaliana XX BF 8893; XX P0 A C G T 01 226 59 152 161 d 02 143 24 71 360 t 03 126 400 0 72 c 04 84 507 0 7 C 05 0 0 598 0 G 06 0 0 0 598 T 07 598 0 0 0 A 08 0 597 0 1 C 09 325 81 101 91 a 10 240 117 94 147 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL1.ampDAP:M0735:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL1.DAP/M0737/AthalianaCistrome XX ID SPL1.DAP:M0737:AthalianaCistrome XX NA SPL1.DAP XX DE SPL1.DAP XX OS Arabidopsis thaliana XX BF 8893; XX P0 A C G T 01 254 97 90 156 w 02 232 87 98 180 w 03 133 112 103 249 t 04 63 121 85 328 t 05 4 1 592 0 G 06 0 0 0 597 T 07 597 0 0 0 A 08 1 596 0 0 C 09 9 5 564 19 G 10 65 0 484 48 G 11 381 79 1 136 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL1.DAP:M0737:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL3.ampDAP/M0740/AthalianaCistrome XX ID SPL3.ampDAP:M0740:AthalianaCistrome XX NA SPL3.ampDAP XX DE SPL3.ampDAP XX OS Arabidopsis thaliana XX BF 7519; XX P0 A C G T 01 253 75 95 154 w 02 255 69 94 159 w 03 108 129 109 231 t 04 39 89 49 400 T 05 0 0 577 0 G 06 0 0 0 577 T 07 577 0 0 0 A 08 0 577 0 0 C 09 0 0 576 1 G 10 12 0 547 18 G 11 484 33 5 55 A 12 136 220 56 165 y 13 222 93 144 118 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL3.ampDAP:M0740:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL11.DAP/M0741/AthalianaCistrome XX ID SPL11.DAP:M0741:AthalianaCistrome XX NA SPL11.DAP XX DE SPL11.DAP XX OS Arabidopsis thaliana XX BF 11680; XX P0 A C G T 01 199 52 84 107 a 02 162 52 112 116 d 03 188 97 41 116 w 04 212 117 12 101 m 05 353 84 5 0 A 06 0 0 442 0 G 07 0 0 0 442 T 08 442 0 0 0 A 09 0 442 0 0 C 10 373 12 29 28 A 11 261 50 68 63 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL11.DAP:M0741:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SRS7.ampDAP/M0744/AthalianaCistrome XX ID SRS7.ampDAP:M0744:AthalianaCistrome XX NA SRS7.ampDAP XX DE SRS7.ampDAP XX OS Arabidopsis thaliana XX BF 12516; XX P0 A C G T 01 1 30 0 4 C 02 3 31 0 1 C 03 1 33 0 1 C 04 1 1 3 30 T 05 34 0 0 1 A 06 31 0 0 4 A 07 34 0 0 1 A 08 1 32 2 0 C 09 1 32 0 2 C 10 1 31 1 2 C 11 0 0 0 35 T 12 32 0 1 2 A 13 28 0 4 3 A 14 30 2 0 3 A 15 2 27 2 4 C 16 3 30 0 2 C 17 0 32 2 1 C 18 1 0 0 34 T 19 34 1 0 0 A 20 24 2 3 6 A 21 32 2 0 1 A 22 2 32 0 1 C 23 0 35 0 0 C 24 0 33 0 2 C 25 3 0 0 32 T 26 35 0 0 0 A 27 31 0 1 3 A 28 29 5 1 0 A 29 2 21 4 8 c 30 3 29 0 3 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SRS7.ampDAP:M0744:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SRS7.DAP/M0745/AthalianaCistrome XX ID SRS7.DAP:M0745:AthalianaCistrome XX NA SRS7.DAP XX DE SRS7.DAP XX OS Arabidopsis thaliana XX BF 12516; XX P0 A C G T 01 24 0 0 1 A 02 22 0 1 2 A 03 25 0 0 0 A 04 0 22 1 2 C 05 0 24 1 0 C 06 2 23 0 0 C 07 0 0 0 25 T 08 23 0 0 2 A 09 21 0 1 3 A 10 22 0 1 2 A 11 1 22 1 1 C 12 2 21 0 2 C 13 0 21 1 3 C 14 0 0 0 25 T 15 24 0 0 1 A 16 17 0 4 4 A 17 23 1 0 1 A 18 2 21 0 2 C 19 0 22 0 3 C 20 0 23 0 2 C 21 2 0 0 23 T 22 25 0 0 0 A 23 22 0 2 1 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SRS7.DAP:M0745:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g72010.ampDAP/M0748/AthalianaCistrome XX ID At1g72010.ampDAP:M0748:AthalianaCistrome XX NA At1g72010.ampDAP XX DE At1g72010.ampDAP XX OS Arabidopsis thaliana XX BF 12336; XX P0 A C G T 01 251 75 100 170 w 02 154 74 107 261 w 03 2 0 594 0 G 04 0 3 0 593 T 05 11 0 585 0 G 06 0 0 596 0 G 07 40 0 537 19 G 08 154 227 79 136 m 09 0 585 0 11 C 10 7 589 0 0 C 11 78 389 14 115 c 12 427 32 71 66 A 13 59 294 74 169 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g72010.ampDAP:M0748:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP3.ampDAP/M0750/AthalianaCistrome XX ID TCP3.ampDAP:M0750:AthalianaCistrome XX NA TCP3.ampDAP XX DE TCP3.ampDAP XX OS Arabidopsis thaliana XX BF 11749; XX P0 A C G T 01 168 72 204 148 d 02 138 106 69 279 t 03 80 89 197 226 k 04 5 0 563 24 G 05 0 0 592 0 G 06 0 0 592 0 G 07 543 34 0 15 A 08 0 592 0 0 C 09 0 592 0 0 C 10 584 1 7 0 A 11 11 553 9 19 C 12 215 161 47 169 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP3.ampDAP:M0750:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP20.DAP/M0752/AthalianaCistrome XX ID TCP20.DAP:M0752:AthalianaCistrome XX NA TCP20.DAP XX DE TCP20.DAP XX OS Arabidopsis thaliana XX BF 3891; XX P0 A C G T 01 196 75 127 192 w 02 247 107 116 120 a 03 159 147 146 138 a 04 268 95 129 98 a 05 171 104 159 156 d 06 253 88 143 106 a 07 180 81 193 136 r 08 169 170 115 136 m 09 219 75 105 191 w 10 157 88 172 173 d 11 72 20 479 19 G 12 18 47 42 483 T 13 59 5 484 42 G 14 3 0 584 3 G 15 4 0 586 0 G 16 282 10 254 44 r 17 24 520 4 42 C 18 0 590 0 0 C 19 1 573 1 15 C 20 543 0 47 0 A 21 16 433 42 99 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP20.DAP:M0752:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP16.ampDAP/M0753/AthalianaCistrome XX ID TCP16.ampDAP:M0753:AthalianaCistrome XX NA TCP16.ampDAP XX DE TCP16.ampDAP XX OS Arabidopsis thaliana XX BF 9996; XX P0 A C G T 01 81 161 69 240 y 02 183 9 321 38 r 03 6 0 545 0 G 04 0 2 546 3 G 05 123 82 39 307 t 06 0 551 0 0 C 07 0 547 2 2 C 08 547 0 4 0 A 09 0 539 1 11 C 10 196 242 24 89 m 11 211 88 92 160 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP16.ampDAP:M0753:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g69690.DAP/M0755/AthalianaCistrome XX ID At1g69690.DAP:M0755:AthalianaCistrome XX NA At1g69690.DAP XX DE At1g69690.DAP XX OS Arabidopsis thaliana XX BF 5383; XX P0 A C G T 01 170 70 85 255 w 02 115 55 215 195 k 03 40 13 527 0 G 04 0 45 0 535 T 05 1 0 579 0 G 06 0 0 580 0 G 07 50 2 506 22 G 08 166 259 31 124 m 09 0 580 0 0 C 10 12 568 0 0 C 11 76 372 23 109 c 12 446 45 57 32 A 13 44 358 49 129 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g69690.DAP:M0755:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g69690.ampDAP/M0756/AthalianaCistrome XX ID At1g69690.ampDAP:M0756:AthalianaCistrome XX NA At1g69690.ampDAP XX DE At1g69690.ampDAP XX OS Arabidopsis thaliana XX BF 5383; XX P0 A C G T 01 179 52 80 276 w 02 110 44 243 190 k 03 0 0 587 0 G 04 0 10 0 577 T 05 4 0 583 0 G 06 0 0 587 0 G 07 37 2 523 25 G 08 175 221 76 115 m 09 2 575 0 10 C 10 15 572 0 0 C 11 83 364 20 120 c 12 445 36 61 45 A 13 54 320 66 147 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g69690.ampDAP:M0756:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g08330.ampDAP/M0757/AthalianaCistrome XX ID At5g08330.ampDAP:M0757:AthalianaCistrome XX NA At5g08330.ampDAP XX DE At5g08330.ampDAP XX OS Arabidopsis thaliana XX BF 12360; XX P0 A C G T 01 165 53 140 226 w 02 5 1 578 0 G 03 0 2 0 582 T 04 0 0 584 0 G 05 0 0 584 0 G 06 39 0 527 18 G 07 171 242 48 123 m 08 1 583 0 0 C 09 7 577 0 0 C 10 66 394 13 111 c 11 436 42 52 54 A 12 51 326 61 146 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g08330.ampDAP:M0757:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At2g45680.ampDAP/M0758/AthalianaCistrome XX ID At2g45680.ampDAP:M0758:AthalianaCistrome XX NA At2g45680.ampDAP XX DE At2g45680.ampDAP XX OS Arabidopsis thaliana XX BF 12347; XX P0 A C G T 01 7 3 518 0 G 02 0 0 0 528 T 03 3 0 525 0 G 04 0 0 528 0 G 05 46 1 464 17 G 06 193 177 50 108 m 07 0 528 0 0 C 08 2 523 0 3 C 09 43 399 5 81 C 10 409 23 62 34 A 11 39 304 60 125 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At2g45680.ampDAP:M0758:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP20.ampDAP/M0759/AthalianaCistrome XX ID TCP20.ampDAP:M0759:AthalianaCistrome XX NA TCP20.ampDAP XX DE TCP20.ampDAP XX OS Arabidopsis thaliana XX BF 3891; XX P0 A C G T 01 130 63 302 47 g 02 37 69 30 406 T 03 87 12 389 54 G 04 2 1 533 6 G 05 0 0 542 0 G 06 121 53 191 177 k 07 16 485 3 38 C 08 0 542 0 0 C 09 0 542 0 0 C 10 542 0 0 0 A 11 0 534 0 8 C 12 174 178 60 130 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP20.ampDAP:M0759:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PTF1.ampDAP/M0760/AthalianaCistrome XX ID PTF1.ampDAP:M0760:AthalianaCistrome XX NA PTF1.ampDAP XX DE PTF1.ampDAP XX OS Arabidopsis thaliana XX BF 12502; XX P0 A C G T 01 186 81 74 186 w 02 166 27 94 240 w 03 16 7 489 15 G 04 2 10 1 514 T 05 0 0 526 1 G 06 0 0 527 0 G 07 23 0 40 464 T 08 0 527 0 0 C 09 0 527 0 0 C 10 27 445 0 55 C 11 179 194 89 65 m 12 279 82 66 100 a 13 136 204 67 120 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PTF1.ampDAP:M0760:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP17.ampDAP/M0766/AthalianaCistrome XX ID TCP17.ampDAP:M0766:AthalianaCistrome XX NA TCP17.ampDAP XX DE TCP17.ampDAP XX OS Arabidopsis thaliana XX BF 12520; XX P0 A C G T 01 16 9 52 6 g 02 7 6 5 65 T 03 6 3 58 16 G 04 2 0 80 1 G 05 1 0 81 1 G 06 1 0 82 0 G 07 79 3 0 1 A 08 0 83 0 0 C 09 0 83 0 0 C 10 81 2 0 0 A 11 5 66 6 6 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP17.ampDAP:M0766:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP16.DAP/M0767/AthalianaCistrome XX ID TCP16.DAP:M0767:AthalianaCistrome XX NA TCP16.DAP XX DE TCP16.DAP XX OS Arabidopsis thaliana XX BF 9996; XX P0 A C G T 01 14 5 53 8 g 02 11 10 4 55 T 03 3 12 35 30 k 04 1 0 78 1 G 05 0 0 79 1 G 06 0 1 79 0 G 07 7 26 1 46 y 08 0 80 0 0 C 09 0 80 0 0 C 10 80 0 0 0 A 11 0 80 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP16.DAP:M0767:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP24.ampDAP/M0768/AthalianaCistrome XX ID TCP24.ampDAP:M0768:AthalianaCistrome XX NA TCP24.ampDAP XX DE TCP24.ampDAP XX OS Arabidopsis thaliana XX BF 11748; XX P0 A C G T 01 2 3 30 3 G 02 5 0 6 27 T 03 2 0 28 8 G 04 0 0 38 0 G 05 0 1 37 0 G 06 2 0 36 0 G 07 38 0 0 0 A 08 0 38 0 0 C 09 1 37 0 0 C 10 35 2 0 1 A 11 0 35 2 1 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP24.ampDAP:M0768:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GTL1.ampDAP/M0769/AthalianaCistrome XX ID GTL1.ampDAP:M0769:AthalianaCistrome XX NA GTL1.ampDAP XX DE GTL1.ampDAP XX OS Arabidopsis thaliana XX BF 17715; XX P0 A C G T 01 392 21 145 42 a 02 141 252 31 176 y 03 161 12 417 10 R 04 0 0 600 0 G 05 0 0 0 600 T 06 534 0 10 56 A 07 600 0 0 0 A 08 522 39 7 32 A 09 363 0 0 237 w 10 332 17 78 173 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GTL1.ampDAP:M0769:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G47660.ampDAP/M0770/AthalianaCistrome XX ID AT5G47660.ampDAP:M0770:AthalianaCistrome XX NA AT5G47660.ampDAP XX DE AT5G47660.ampDAP XX OS Arabidopsis thaliana XX BF 11391; XX P0 A C G T 01 199 61 64 276 w 02 263 93 67 177 w 03 287 103 66 144 a 04 167 220 47 166 h 05 211 177 52 160 h 06 383 5 203 9 r 07 36 463 20 81 C 08 215 0 379 6 r 09 0 0 600 0 G 10 0 0 0 600 T 11 387 10 10 193 w 12 592 8 0 0 A 13 487 40 12 61 A 14 386 23 2 189 w 15 354 67 45 134 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G47660.ampDAP:M0770:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GTL1.DAP/M0771/AthalianaCistrome XX ID GTL1.DAP:M0771:AthalianaCistrome XX NA GTL1.DAP XX DE GTL1.DAP XX OS Arabidopsis thaliana XX BF 17715; XX P0 A C G T 01 387 36 113 63 a 02 123 268 37 171 y 03 205 50 313 31 r 04 0 0 599 0 G 05 0 0 0 599 T 06 515 0 0 84 A 07 599 0 0 0 A 08 574 7 0 18 A 09 430 0 0 169 W 10 367 26 66 140 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GTL1.DAP:M0771:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G05550.DAP/M0772/AthalianaCistrome XX ID AT5G05550.DAP:M0772:AthalianaCistrome XX NA AT5G05550.DAP XX DE AT5G05550.DAP XX OS Arabidopsis thaliana XX BF 17766; XX P0 A C G T 01 181 152 71 192 h 02 192 81 98 225 w 03 123 62 45 366 t 04 7 355 3 231 y 05 86 9 123 378 t 06 1 595 0 0 C 07 0 596 0 0 C 08 0 0 596 0 G 09 52 68 451 25 G 10 0 496 0 100 C 11 35 17 543 1 G 12 394 27 115 60 a 13 96 213 71 216 y 14 184 75 259 78 r 15 231 61 124 180 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G05550.DAP:M0772:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G33550.ampDAP/M0774/AthalianaCistrome XX ID AT2G33550.ampDAP:M0774:AthalianaCistrome XX NA AT2G33550.ampDAP XX DE AT2G33550.ampDAP XX OS Arabidopsis thaliana XX BF 12282; XX P0 A C G T 01 236 113 144 106 a 02 279 109 74 137 a 03 337 78 53 131 a 04 283 50 95 171 w 05 206 72 171 150 d 06 110 0 61 428 T 07 252 0 347 0 r 08 36 485 0 78 C 09 0 599 0 0 C 10 0 536 0 63 C 11 9 62 6 522 T 12 284 17 0 298 w 13 389 99 19 92 a 14 374 47 47 131 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G33550.ampDAP:M0774:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G05550.ampDAP/M0775/AthalianaCistrome XX ID AT5G05550.ampDAP:M0775:AthalianaCistrome XX NA AT5G05550.ampDAP XX DE AT5G05550.ampDAP XX OS Arabidopsis thaliana XX BF 17766; XX P0 A C G T 01 176 151 71 192 h 02 222 56 105 207 w 03 137 69 47 337 t 04 7 363 14 206 y 05 59 7 103 421 T 06 0 589 0 1 C 07 0 590 0 0 C 08 0 0 590 0 G 09 29 50 501 10 G 10 0 480 0 110 C 11 45 8 537 0 G 12 396 23 115 56 a 13 116 192 94 188 y 14 185 50 278 77 r 15 214 62 128 186 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G05550.ampDAP:M0775:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT2.ampDAP/M0776/AthalianaCistrome XX ID GT2.ampDAP:M0776:AthalianaCistrome XX NA GT2.ampDAP XX DE GT2.ampDAP XX OS Arabidopsis thaliana XX BF 12415; XX P0 A C G T 01 373 0 195 30 r 02 88 391 27 92 c 03 183 0 376 39 r 04 0 0 598 0 G 05 0 0 0 598 T 06 495 0 9 94 A 07 598 0 0 0 A 08 519 24 7 48 A 09 411 0 0 187 W 10 387 27 46 138 a 11 280 65 54 199 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT2.ampDAP:M0776:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g14180.DAP/M0777/AthalianaCistrome XX ID At3g14180.DAP:M0777:AthalianaCistrome XX NA At3g14180.DAP XX DE At3g14180.DAP XX OS Arabidopsis thaliana XX BF 12352; XX P0 A C G T 01 33 80 34 451 T 02 23 490 23 62 C 03 194 0 404 0 r 04 11 556 1 30 C 05 0 598 0 0 C 06 0 0 598 0 G 07 0 0 598 0 G 08 533 32 8 25 A 09 304 6 273 15 r 10 418 32 47 101 A 11 303 90 37 168 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g14180.DAP:M0777:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G25990.ampDAP/M0778/AthalianaCistrome XX ID AT3G25990.ampDAP:M0778:AthalianaCistrome XX NA AT3G25990.ampDAP XX DE AT3G25990.ampDAP XX OS Arabidopsis thaliana XX BF 11390; XX P0 A C G T 01 201 23 128 248 w 02 130 82 126 262 t 03 99 84 65 352 t 04 100 28 43 429 T 05 399 8 98 95 a 06 460 19 59 62 A 07 64 378 70 88 c 08 27 223 12 338 y 09 368 68 74 90 a 10 28 148 97 327 t 11 158 0 437 5 R 12 3 0 597 0 G 13 0 2 0 598 T 14 0 8 0 592 T 15 481 2 58 59 A 16 327 70 190 13 r 17 118 116 226 140 g 18 79 44 170 307 k 19 143 49 81 327 t 20 181 46 78 295 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G25990.ampDAP:M0778:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G10030.ampDAP/M0779/AthalianaCistrome XX ID AT3G10030.ampDAP:M0779:AthalianaCistrome XX NA AT3G10030.ampDAP XX DE AT3G10030.ampDAP XX OS Arabidopsis thaliana XX BF 12286; XX P0 A C G T 01 277 147 41 132 a 02 159 62 241 135 r 03 53 58 57 429 T 04 6 0 0 591 T 05 533 3 58 3 A 06 596 0 1 0 A 07 0 597 0 0 C 08 32 4 559 2 G 09 45 30 477 45 G 10 112 392 5 88 c 11 68 42 391 96 g 12 92 27 167 311 k 13 63 122 28 384 t 14 270 21 92 214 w 15 336 28 115 118 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G10030.ampDAP:M0779:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G10030.DAP/M0781/AthalianaCistrome XX ID AT3G10030.DAP:M0781:AthalianaCistrome XX NA AT3G10030.DAP XX DE AT3G10030.DAP XX OS Arabidopsis thaliana XX BF 12286; XX P0 A C G T 01 265 139 56 138 a 02 172 92 183 151 d 03 77 89 101 331 t 04 23 0 0 575 T 05 512 9 76 1 A 06 598 0 0 0 A 07 1 597 0 0 C 08 3 0 594 1 G 09 5 32 548 13 G 10 122 413 0 63 C 11 94 12 481 11 G 12 105 62 94 337 t 13 59 194 47 298 y 14 297 29 139 133 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G10030.DAP:M0781:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G58630.DAP/M0782/AthalianaCistrome XX ID AT3G58630.DAP:M0782:AthalianaCistrome XX NA AT3G58630.DAP XX DE AT3G58630.DAP XX OS Arabidopsis thaliana XX BF 12297; XX P0 A C G T 01 207 115 132 101 a 02 200 140 64 151 h 03 215 41 99 200 w 04 115 63 58 319 t 05 17 389 15 134 C 06 43 16 56 440 T 07 0 555 0 0 C 08 0 555 0 0 C 09 0 0 555 0 G 10 12 0 527 16 G 11 0 477 1 77 C 12 63 25 446 21 G 13 385 33 83 54 A 14 129 202 120 104 c 15 162 64 199 130 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G58630.DAP:M0782:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G58630.ampDAP/M0783/AthalianaCistrome XX ID AT3G58630.ampDAP:M0783:AthalianaCistrome XX NA AT3G58630.ampDAP XX DE AT3G58630.ampDAP XX OS Arabidopsis thaliana XX BF 12297; XX P0 A C G T 01 189 113 116 114 a 02 198 123 64 147 w 03 192 43 79 218 w 04 107 58 64 303 t 05 16 367 8 141 Y 06 23 9 61 439 T 07 1 528 0 3 C 08 0 532 0 0 C 09 0 0 532 0 G 10 10 6 511 5 G 11 1 435 6 90 C 12 66 20 402 44 G 13 358 45 77 52 a 14 112 216 105 99 c 15 144 74 198 116 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G58630.ampDAP:M0783:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT1.DAP/M0784/AthalianaCistrome XX ID GT1.DAP:M0784:AthalianaCistrome XX NA GT1.DAP XX DE GT1.DAP XX OS Arabidopsis thaliana XX BF 7513; XX P0 A C G T 01 201 112 49 75 m 02 151 116 62 108 m 03 16 164 54 203 y 04 47 18 4 368 T 05 415 3 8 11 A 06 433 0 0 4 A 07 1 431 0 5 C 08 0 320 0 117 Y 09 256 37 116 28 r 10 25 73 39 300 T 11 176 3 258 0 r 12 90 19 300 28 G 13 11 56 8 362 T 14 22 87 0 328 T 15 280 30 68 59 a 16 287 19 51 80 a 17 192 78 89 78 a 18 185 82 25 145 w 19 84 147 55 151 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT1.DAP:M0784:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G33550.DAP/M0787/AthalianaCistrome XX ID AT2G33550.DAP:M0787:AthalianaCistrome XX NA AT2G33550.DAP XX DE AT2G33550.DAP XX OS Arabidopsis thaliana XX BF 12282; XX P0 A C G T 01 91 40 57 150 w 02 126 57 74 81 a 03 126 47 83 82 a 04 102 80 77 79 a 05 128 78 57 75 a 06 136 73 37 92 w 07 188 50 35 65 a 08 119 44 34 141 w 09 127 47 76 88 w 10 85 7 54 192 w 11 164 4 147 23 r 12 14 285 0 39 C 13 0 338 0 0 C 14 0 323 0 15 C 15 5 10 2 321 T 16 171 7 0 160 w 17 268 26 26 18 A 18 210 25 25 78 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G33550.DAP:M0787:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY15.DAP/M0791/AthalianaCistrome XX ID WRKY15.DAP:M0791:AthalianaCistrome XX NA WRKY15.DAP XX DE WRKY15.DAP XX OS Arabidopsis thaliana XX BF 11971; XX P0 A C G T 01 274 136 77 113 a 02 368 69 73 90 a 03 430 18 37 115 A 04 484 5 101 10 A 05 0 0 600 0 G 06 0 0 0 600 T 07 0 600 0 0 C 08 600 0 0 0 A 09 600 0 0 0 A 10 118 432 4 46 C 11 71 83 330 116 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY15.DAP:M0791:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY8.DAP/M0792/AthalianaCistrome XX ID WRKY8.DAP:M0792:AthalianaCistrome XX NA WRKY8.DAP XX DE WRKY8.DAP XX OS Arabidopsis thaliana XX BF 11830; XX P0 A C G T 01 186 104 173 137 r 02 275 98 108 119 a 03 363 79 90 68 a 04 528 8 37 27 A 05 566 0 7 27 A 06 575 0 24 1 A 07 0 0 600 0 G 08 0 0 0 600 T 09 0 600 0 0 C 10 600 0 0 0 A 11 600 0 0 0 A 12 58 527 0 15 C 13 87 72 376 65 g 14 191 146 117 146 a 15 176 132 63 229 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY8.DAP:M0792:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY27.ampDAP/M0793/AthalianaCistrome XX ID WRKY27.ampDAP:M0793:AthalianaCistrome XX NA WRKY27.ampDAP XX DE WRKY27.ampDAP XX OS Arabidopsis thaliana XX BF 11832; XX P0 A C G T 01 311 112 74 103 a 02 436 26 49 89 A 03 480 8 27 85 A 04 514 0 72 14 A 05 1 0 599 0 G 06 0 0 0 600 T 07 0 600 0 0 C 08 600 0 0 0 A 09 595 0 5 0 A 10 70 503 2 25 C 11 66 61 310 163 k 12 183 148 113 156 w 13 117 141 67 275 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY27.ampDAP:M0793:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY75.DAP/M0794/AthalianaCistrome XX ID WRKY75.DAP:M0794:AthalianaCistrome XX NA WRKY75.DAP XX DE WRKY75.DAP XX OS Arabidopsis thaliana XX BF 11828; XX P0 A C G T 01 281 113 97 109 a 02 424 43 63 70 A 03 432 36 31 101 A 04 489 5 101 5 A 05 0 0 600 0 G 06 0 2 0 598 T 07 0 600 0 0 C 08 600 0 0 0 A 09 599 0 0 1 A 10 91 471 6 32 C 11 93 57 403 47 g 12 166 141 146 147 a 13 164 187 73 176 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY75.DAP:M0794:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY18.DAP/M0795/AthalianaCistrome XX ID WRKY18.DAP:M0795:AthalianaCistrome XX NA WRKY18.DAP XX DE WRKY18.DAP XX OS Arabidopsis thaliana XX BF 7524; XX P0 A C G T 01 196 164 148 91 m 02 317 101 77 104 a 03 326 92 38 143 a 04 381 2 216 0 r 05 2 0 596 1 G 06 0 0 0 599 T 07 2 597 0 0 C 08 598 0 0 1 A 09 586 0 3 10 A 10 77 304 156 62 s 11 166 53 321 59 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY18.DAP:M0795:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY29.ampDAP/M0796/AthalianaCistrome XX ID WRKY29.ampDAP:M0796:AthalianaCistrome XX NA WRKY29.ampDAP XX DE WRKY29.ampDAP XX OS Arabidopsis thaliana XX BF 11825; XX P0 A C G T 01 269 140 67 123 a 02 360 70 67 102 a 03 410 9 64 116 A 04 459 5 104 31 A 05 0 0 598 1 G 06 0 0 2 597 T 07 0 599 0 0 C 08 596 2 0 1 A 09 588 0 11 0 A 10 133 411 1 54 C 11 101 72 248 178 k 12 188 140 114 157 w 13 138 135 76 250 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY29.ampDAP:M0796:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY25.ampDAP/M0797/AthalianaCistrome XX ID WRKY25.ampDAP:M0797:AthalianaCistrome XX NA WRKY25.ampDAP XX DE WRKY25.ampDAP XX OS Arabidopsis thaliana XX BF 11818; XX P0 A C G T 01 268 58 122 152 w 02 149 137 171 143 g 03 51 385 64 100 c 04 7 0 494 99 G 05 0 0 0 600 T 06 0 0 0 600 T 07 0 0 599 1 G 08 600 0 0 0 A 09 0 600 0 0 C 10 0 208 0 392 y 11 197 34 76 293 w 12 137 39 93 331 t 13 122 76 127 275 t 14 145 110 133 212 t 15 162 163 81 194 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY25.ampDAP:M0797:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY22.ampDAP/M0798/AthalianaCistrome XX ID WRKY22.ampDAP:M0798:AthalianaCistrome XX NA WRKY22.ampDAP XX DE WRKY22.ampDAP XX OS Arabidopsis thaliana XX BF 11823; XX P0 A C G T 01 294 64 115 127 a 02 148 98 159 195 k 03 198 288 65 49 m 04 25 1 518 56 G 05 0 0 0 600 T 06 0 0 0 600 T 07 0 0 600 0 G 08 600 0 0 0 A 09 0 600 0 0 C 10 9 23 0 568 T 11 42 7 2 549 T 12 39 21 14 526 T 13 61 61 87 391 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY22.ampDAP:M0798:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY18.ampDAP/M0801/AthalianaCistrome XX ID WRKY18.ampDAP:M0801:AthalianaCistrome XX NA WRKY18.ampDAP XX DE WRKY18.ampDAP XX OS Arabidopsis thaliana XX BF 7524; XX P0 A C G T 01 57 294 62 187 y 02 77 105 309 109 g 03 4 1 1 594 T 04 5 0 0 595 T 05 0 0 597 3 G 06 594 1 4 1 A 07 0 598 0 2 C 08 1 146 2 451 T 09 113 38 54 395 t 10 100 68 81 351 t 11 87 121 140 252 t 12 132 103 130 235 t 13 140 164 91 205 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY18.ampDAP:M0801:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY65.ampDAP/M0802/AthalianaCistrome XX ID WRKY65.ampDAP:M0802:AthalianaCistrome XX NA WRKY65.ampDAP XX DE WRKY65.ampDAP XX OS Arabidopsis thaliana XX BF 12555; XX P0 A C G T 01 135 129 183 152 k 02 81 455 34 29 C 03 12 0 582 5 G 04 0 0 0 599 T 05 0 0 0 599 T 06 0 0 599 0 G 07 599 0 0 0 A 08 0 599 0 0 C 09 3 69 0 527 T 10 85 20 3 491 T 11 75 56 20 448 T 12 93 92 112 302 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY65.ampDAP:M0802:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY24.ampDAP/M0803/AthalianaCistrome XX ID WRKY24.ampDAP:M0803:AthalianaCistrome XX NA WRKY24.ampDAP XX DE WRKY24.ampDAP XX OS Arabidopsis thaliana XX BF 12544; XX P0 A C G T 01 231 57 161 151 d 02 127 126 169 178 k 03 35 458 25 82 C 04 10 0 559 31 G 05 0 0 0 600 T 06 0 0 0 600 T 07 0 0 600 0 G 08 598 0 2 0 A 09 0 600 0 0 C 10 0 122 0 478 T 11 127 28 37 408 T 12 103 52 31 414 T 13 103 98 100 299 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY24.ampDAP:M0803:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY75.ampDAP/M0804/AthalianaCistrome XX ID WRKY75.ampDAP:M0804:AthalianaCistrome XX NA WRKY75.ampDAP XX DE WRKY75.ampDAP XX OS Arabidopsis thaliana XX BF 11828; XX P0 A C G T 01 212 70 152 166 d 02 163 112 139 186 w 03 73 351 66 110 c 04 37 4 453 106 G 05 2 0 0 598 T 06 0 0 1 599 T 07 0 0 600 0 G 08 596 2 2 0 A 09 0 600 0 0 C 10 3 47 0 550 T 11 76 16 4 504 T 12 59 40 20 481 T 13 71 83 99 347 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY75.ampDAP:M0804:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY45.DAP/M0805/AthalianaCistrome XX ID WRKY45.DAP:M0805:AthalianaCistrome XX NA WRKY45.DAP XX DE WRKY45.DAP XX OS Arabidopsis thaliana XX BF 8902; XX P0 A C G T 01 91 297 74 138 c 02 34 1 383 182 k 03 1 2 0 597 T 04 0 0 0 600 T 05 0 1 599 0 G 06 599 0 1 0 A 07 0 600 0 0 C 08 1 16 0 583 T 09 26 8 8 558 T 10 27 25 15 533 T 11 58 69 82 391 t 12 106 92 130 272 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY45.DAP:M0805:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY14.ampDAP/M0809/AthalianaCistrome XX ID WRKY14.ampDAP:M0809:AthalianaCistrome XX NA WRKY14.ampDAP XX DE WRKY14.ampDAP XX OS Arabidopsis thaliana XX BF 11811; XX P0 A C G T 01 300 121 92 86 a 02 423 37 54 85 A 03 463 23 22 91 A 04 503 0 88 8 A 05 0 0 599 0 G 06 0 0 0 599 T 07 0 599 0 0 C 08 599 0 0 0 A 09 599 0 0 0 A 10 29 556 0 14 C 11 48 35 426 90 G 12 153 178 132 136 m 13 137 145 70 247 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY14.ampDAP:M0809:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY40.DAP/M0812/AthalianaCistrome XX ID WRKY40.DAP:M0812:AthalianaCistrome XX NA WRKY40.DAP XX DE WRKY40.DAP XX OS Arabidopsis thaliana XX BF 11814; XX P0 A C G T 01 192 69 173 166 d 02 174 136 125 165 w 03 61 291 77 171 y 04 71 89 279 161 k 05 6 0 0 594 T 06 0 0 0 600 T 07 0 0 599 1 G 08 597 0 3 0 A 09 0 600 0 0 C 10 0 125 0 475 T 11 108 19 40 433 T 12 67 37 97 399 t 13 66 90 129 315 t 14 138 131 82 249 t 15 149 163 98 190 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY40.DAP:M0812:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY15.ampDAP/M0813/AthalianaCistrome XX ID WRKY15.ampDAP:M0813:AthalianaCistrome XX NA WRKY15.ampDAP XX DE WRKY15.ampDAP XX OS Arabidopsis thaliana XX BF 11971; XX P0 A C G T 01 142 105 183 167 k 02 109 378 69 41 c 03 9 0 528 60 G 04 0 0 0 597 T 05 0 0 0 597 T 06 0 0 596 1 G 07 597 0 0 0 A 08 0 597 0 0 C 09 3 16 0 578 T 10 43 7 3 544 T 11 39 39 10 509 T 12 71 66 78 382 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY15.ampDAP:M0813:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY25.DAP/M0814/AthalianaCistrome XX ID WRKY25.DAP:M0814:AthalianaCistrome XX NA WRKY25.DAP XX DE WRKY25.DAP XX OS Arabidopsis thaliana XX BF 11818; XX P0 A C G T 01 306 109 67 117 a 02 358 89 27 125 a 03 294 82 39 184 w 04 417 0 182 0 R 05 0 0 599 0 G 06 0 0 0 599 T 07 0 599 0 0 C 08 599 0 0 0 A 09 599 0 0 0 A 10 150 436 0 13 M 11 93 66 392 48 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY25.DAP:M0814:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY6.ampDAP/M0816/AthalianaCistrome XX ID WRKY6.ampDAP:M0816:AthalianaCistrome XX NA WRKY6.ampDAP XX DE WRKY6.ampDAP XX OS Arabidopsis thaliana XX BF 12554; XX P0 A C G T 01 211 64 178 146 r 02 134 127 174 164 k 03 99 377 55 68 c 04 22 1 526 50 G 05 0 0 0 599 T 06 0 0 0 599 T 07 0 0 599 0 G 08 598 0 1 0 A 09 0 599 0 0 C 10 3 188 6 402 y 11 158 70 61 310 w 12 148 75 90 286 t 13 113 68 178 240 k 14 141 87 141 230 t 15 125 148 84 242 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY6.ampDAP:M0816:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY30.ampDAP/M0818/AthalianaCistrome XX ID WRKY30.ampDAP:M0818:AthalianaCistrome XX NA WRKY30.ampDAP XX DE WRKY30.ampDAP XX OS Arabidopsis thaliana XX BF 11829; XX P0 A C G T 01 214 180 86 118 m 02 358 77 87 76 a 03 465 24 52 57 A 04 520 4 74 0 A 05 0 0 598 0 G 06 0 0 0 598 T 07 0 598 0 0 C 08 598 0 0 0 A 09 598 0 0 0 A 10 2 591 0 5 C 11 23 48 460 67 G 12 111 219 141 127 c 13 131 177 62 228 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY30.ampDAP:M0818:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY31.ampDAP/M0819/AthalianaCistrome XX ID WRKY31.ampDAP:M0819:AthalianaCistrome XX NA WRKY31.ampDAP XX DE WRKY31.ampDAP XX OS Arabidopsis thaliana XX BF 12548; XX P0 A C G T 01 207 63 166 162 d 02 142 129 176 151 k 03 94 393 46 65 c 04 14 0 538 46 G 05 0 0 0 598 T 06 0 0 0 598 T 07 0 0 598 0 G 08 598 0 0 0 A 09 0 598 0 0 C 10 3 193 2 400 y 11 162 72 72 292 w 12 143 67 99 289 t 13 125 76 164 233 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY31.ampDAP:M0819:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY8.ampDAP/M0820/AthalianaCistrome XX ID WRKY8.ampDAP:M0820:AthalianaCistrome XX NA WRKY8.ampDAP XX DE WRKY8.ampDAP XX OS Arabidopsis thaliana XX BF 11830; XX P0 A C G T 01 228 73 73 225 w 02 254 57 88 200 w 03 146 107 141 205 t 04 65 340 74 120 c 05 4 0 556 39 G 06 0 0 0 599 T 07 0 0 0 599 T 08 0 0 599 0 G 09 598 0 1 0 A 10 0 599 0 0 C 11 0 4 0 595 T 12 9 1 0 589 T 13 13 6 1 579 T 14 47 55 46 451 T 15 112 90 81 316 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY8.ampDAP:M0820:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY45.ampDAP/M0821/AthalianaCistrome XX ID WRKY45.ampDAP:M0821:AthalianaCistrome XX NA WRKY45.ampDAP XX DE WRKY45.ampDAP XX OS Arabidopsis thaliana XX BF 8902; XX P0 A C G T 01 355 97 65 66 a 02 526 7 29 21 A 03 545 0 7 31 A 04 576 0 6 1 A 05 1 0 582 0 G 06 0 5 1 577 T 07 0 583 0 0 C 08 581 2 0 0 A 09 581 0 2 0 A 10 169 390 1 23 m 11 139 88 289 67 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY45.ampDAP:M0821:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY50.ampDAP/M0824/AthalianaCistrome XX ID WRKY50.ampDAP:M0824:AthalianaCistrome XX NA WRKY50.ampDAP XX DE WRKY50.ampDAP XX OS Arabidopsis thaliana XX BF 12551; XX P0 A C G T 01 278 104 87 122 a 02 369 73 69 80 a 03 409 33 43 106 A 04 483 0 102 6 A 05 0 0 591 0 G 06 0 6 1 584 T 07 0 591 0 0 C 08 539 29 0 23 A 09 511 8 28 44 A 10 233 155 86 117 m 11 194 110 196 91 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY50.ampDAP:M0824:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY21.DAP/M0827/AthalianaCistrome XX ID WRKY21.DAP:M0827:AthalianaCistrome XX NA WRKY21.DAP XX DE WRKY21.DAP XX OS Arabidopsis thaliana XX BF 11819; XX P0 A C G T 01 345 108 59 82 a 02 470 31 39 54 A 03 505 7 23 59 A 04 526 0 54 14 A 05 0 0 594 0 G 06 0 0 0 594 T 07 0 594 0 0 C 08 594 0 0 0 A 09 594 0 0 0 A 10 80 501 0 13 C 11 58 75 352 109 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY21.DAP:M0827:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY43.ampDAP/M0828/AthalianaCistrome XX ID WRKY43.ampDAP:M0828:AthalianaCistrome XX NA WRKY43.ampDAP XX DE WRKY43.ampDAP XX OS Arabidopsis thaliana XX BF 12057; XX P0 A C G T 01 242 119 75 153 w 02 225 104 125 135 a 03 251 110 115 113 a 04 321 89 88 91 a 05 423 33 42 91 A 06 423 41 21 104 A 07 467 0 122 0 A 08 0 0 589 0 G 09 0 0 0 589 T 10 0 589 0 0 C 11 589 0 0 0 A 12 589 0 0 0 A 13 71 498 0 20 C 14 83 42 419 45 G 15 188 160 118 123 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY43.ampDAP:M0828:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY43.DAP/M0831/AthalianaCistrome XX ID WRKY43.DAP:M0831:AthalianaCistrome XX NA WRKY43.DAP XX DE WRKY43.DAP XX OS Arabidopsis thaliana XX BF 12057; XX P0 A C G T 01 142 65 165 134 d 02 105 120 119 162 t 03 37 359 42 68 C 04 25 6 387 88 G 05 0 0 0 506 T 06 0 0 0 506 T 07 0 0 506 0 G 08 483 0 23 0 A 09 0 506 0 0 C 10 0 90 0 416 T 11 73 22 38 373 T 12 51 50 30 375 T 13 84 72 94 256 t 14 91 95 105 215 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY43.DAP:M0831:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY30.DAP/M0832/AthalianaCistrome XX ID WRKY30.DAP:M0832:AthalianaCistrome XX NA WRKY30.DAP XX DE WRKY30.DAP XX OS Arabidopsis thaliana XX BF 11829; XX P0 A C G T 01 357 66 81 79 a 02 459 15 41 68 A 03 514 2 67 0 A 04 0 0 583 0 G 05 0 0 0 583 T 06 0 583 0 0 C 07 583 0 0 0 A 08 583 0 0 0 A 09 3 576 0 4 C 10 31 64 404 84 G 11 125 219 129 110 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY30.DAP:M0832:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY26.ampDAP/M0833/AthalianaCistrome XX ID WRKY26.ampDAP:M0833:AthalianaCistrome XX NA WRKY26.ampDAP XX DE WRKY26.ampDAP XX OS Arabidopsis thaliana XX BF 12545; XX P0 A C G T 01 51 382 65 90 c 02 12 0 423 153 K 03 0 0 0 588 T 04 5 0 0 583 T 05 0 0 588 0 G 06 562 0 24 2 A 07 0 586 2 0 C 08 0 128 0 460 T 09 132 40 64 352 t 10 72 62 90 364 t 11 82 63 155 288 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY26.ampDAP:M0833:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY21.ampDAP/M0834/AthalianaCistrome XX ID WRKY21.ampDAP:M0834:AthalianaCistrome XX NA WRKY21.ampDAP XX DE WRKY21.ampDAP XX OS Arabidopsis thaliana XX BF 11819; XX P0 A C G T 01 209 71 155 143 r 02 130 100 189 159 k 03 116 314 75 73 c 04 21 1 463 93 G 05 0 1 1 576 T 06 0 0 0 578 T 07 0 0 577 1 G 08 568 0 10 0 A 09 0 577 1 0 C 10 14 17 0 547 T 11 35 17 0 526 T 12 44 56 20 458 T 13 80 68 112 318 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY21.ampDAP:M0834:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY40.ampDAP/M0835/AthalianaCistrome XX ID WRKY40.ampDAP:M0835:AthalianaCistrome XX NA WRKY40.ampDAP XX DE WRKY40.ampDAP XX OS Arabidopsis thaliana XX BF 11814; XX P0 A C G T 01 190 105 146 120 r 02 231 83 126 121 a 03 291 111 87 72 a 04 385 84 47 45 A 05 421 43 12 85 A 06 477 0 84 0 A 07 0 0 561 0 G 08 0 5 0 556 T 09 0 561 0 0 C 10 561 0 0 0 A 11 561 0 0 0 A 12 150 281 82 48 m 13 196 75 241 49 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY40.ampDAP:M0835:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY47.ampDAP/M0836/AthalianaCistrome XX ID WRKY47.ampDAP:M0836:AthalianaCistrome XX NA WRKY47.ampDAP XX DE WRKY47.ampDAP XX OS Arabidopsis thaliana XX BF 11824; XX P0 A C G T 01 233 111 95 112 a 02 228 121 71 131 a 03 133 142 92 184 y 04 150 135 86 180 w 05 211 53 150 137 r 06 122 102 163 164 k 07 100 349 43 59 c 08 19 0 461 71 G 09 10 0 0 541 T 10 3 5 0 543 T 11 0 2 545 4 G 12 529 0 21 1 A 13 3 544 2 2 C 14 5 168 5 373 y 15 166 49 59 277 w 16 143 52 88 268 w 17 120 75 142 214 k 18 127 77 117 230 t 19 102 123 100 226 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY47.ampDAP:M0836:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY17.ampDAP/M0837/AthalianaCistrome XX ID WRKY17.ampDAP:M0837:AthalianaCistrome XX NA WRKY17.ampDAP XX DE WRKY17.ampDAP XX OS Arabidopsis thaliana XX BF 11816; XX P0 A C G T 01 172 69 62 86 a 02 246 66 44 33 a 03 353 3 22 11 A 04 383 0 1 5 A 05 386 0 3 0 A 06 0 0 389 0 G 07 0 20 0 369 T 08 0 389 0 0 C 09 389 0 0 0 A 10 388 0 0 1 A 11 29 359 0 1 C 12 3 35 305 46 G 13 110 118 80 81 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY17.ampDAP:M0837:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY42.ampDAP/M0838/AthalianaCistrome XX ID WRKY42.ampDAP:M0838:AthalianaCistrome XX NA WRKY42.ampDAP XX DE WRKY42.ampDAP XX OS Arabidopsis thaliana XX BF 12549; XX P0 A C G T 01 153 106 48 137 w 02 175 74 83 112 w 03 188 55 97 104 a 04 127 110 77 130 w 05 151 119 74 100 m 06 184 66 64 130 w 07 209 51 52 132 w 08 268 8 150 18 r 09 0 0 444 0 G 10 0 0 0 444 T 11 2 442 0 0 C 12 444 0 0 0 A 13 444 0 0 0 A 14 7 431 0 6 C 15 57 28 286 73 g 16 123 132 88 101 m 17 123 118 54 149 h 18 138 58 130 118 d 19 134 51 129 130 d 20 80 54 111 199 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY42.ampDAP:M0838:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY7.ampDAP/M0843/AthalianaCistrome XX ID WRKY7.ampDAP:M0843:AthalianaCistrome XX NA WRKY7.ampDAP XX DE WRKY7.ampDAP XX OS Arabidopsis thaliana XX BF 12556; XX P0 A C G T 01 47 21 21 74 w 02 77 21 29 36 a 03 55 12 54 42 d 04 82 18 25 38 a 05 83 19 22 39 a 06 43 29 51 40 r 07 64 31 29 39 a 08 49 46 27 41 h 09 84 33 24 22 a 10 104 39 11 9 a 11 157 0 3 3 A 12 163 0 0 0 A 13 162 0 1 0 A 14 2 0 159 2 G 15 0 25 1 137 T 16 0 163 0 0 C 17 162 0 1 0 A 18 162 0 0 1 A 19 31 130 1 1 C 20 3 10 138 12 G 21 59 50 37 17 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY7.ampDAP:M0843:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY28.ampDAP/M0844/AthalianaCistrome XX ID WRKY28.ampDAP:M0844:AthalianaCistrome XX NA WRKY28.ampDAP XX DE WRKY28.ampDAP XX OS Arabidopsis thaliana XX BF 12546; XX P0 A C G T 01 71 25 16 16 a 02 120 0 7 1 A 03 128 0 0 0 A 04 127 0 1 0 A 05 0 0 128 0 G 06 0 14 0 114 T 07 0 128 0 0 C 08 123 0 0 5 A 09 128 0 0 0 A 10 34 88 1 5 M 11 16 13 82 17 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY28.ampDAP:M0844:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY46.ampDAP/M0845/AthalianaCistrome XX ID WRKY46.ampDAP:M0845:AthalianaCistrome XX NA WRKY46.ampDAP XX DE WRKY46.ampDAP XX OS Arabidopsis thaliana XX BF 12550; XX P0 A C G T 01 49 44 14 23 m 02 79 14 24 13 a 03 93 5 15 17 A 04 111 3 15 1 A 05 0 1 129 0 G 06 1 17 0 112 T 07 0 130 0 0 C 08 124 0 0 6 A 09 130 0 0 0 A 10 21 105 0 4 C 11 1 4 107 18 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY46.ampDAP:M0845:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G42860.DAP/M0850/AthalianaCistrome XX ID AT3G42860.DAP:M0850:AthalianaCistrome XX NA AT3G42860.DAP XX DE AT3G42860.DAP XX OS Arabidopsis thaliana XX BF 17738; XX P0 A C G T 01 226 178 82 113 m 02 360 77 88 74 a 03 441 27 67 64 A 04 529 2 67 1 A 05 0 0 599 0 G 06 0 0 0 599 T 07 1 598 0 0 C 08 599 0 0 0 A 09 599 0 0 0 A 10 2 583 0 14 C 11 41 50 427 81 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G42860.DAP:M0850:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB25.ampDAP/M0853/AthalianaCistrome XX ID ATHB25.ampDAP:M0853:AthalianaCistrome XX NA ATHB25.ampDAP XX DE ATHB25.ampDAP XX OS Arabidopsis thaliana XX BF 12325; XX P0 A C G T 01 134 205 95 163 y 02 178 64 198 157 d 03 0 24 0 573 T 04 381 42 174 0 r 05 593 3 1 0 A 06 0 0 0 597 T 07 0 0 0 597 T 08 597 0 0 0 A 09 320 9 237 31 r 10 12 178 149 258 y 11 168 95 203 131 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB25.ampDAP:M0853:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB34.ampDAP/M0854/AthalianaCistrome XX ID ATHB34.ampDAP:M0854:AthalianaCistrome XX NA ATHB34.ampDAP XX DE ATHB34.ampDAP XX OS Arabidopsis thaliana XX BF 12327; XX P0 A C G T 01 234 55 14 292 w 02 327 30 29 209 w 03 355 45 60 135 a 04 277 85 60 173 w 05 232 102 117 144 a 06 147 179 109 160 y 07 196 100 126 173 w 08 86 31 32 446 T 09 269 21 305 0 r 10 588 0 7 0 A 11 0 0 0 595 T 12 0 0 0 595 T 13 595 0 0 0 A 14 341 9 245 0 r 15 68 150 131 246 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB34.ampDAP:M0854:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB23.ampDAP/M0855/AthalianaCistrome XX ID ATHB23.ampDAP:M0855:AthalianaCistrome XX NA ATHB23.ampDAP XX DE ATHB23.ampDAP XX OS Arabidopsis thaliana XX BF 12323; XX P0 A C G T 01 144 167 90 163 h 02 173 36 94 261 w 03 0 16 0 548 T 04 467 0 97 0 A 05 564 0 0 0 A 06 0 0 0 564 T 07 0 0 0 564 T 08 564 0 0 0 A 09 354 0 210 0 r 10 52 97 78 337 t 11 127 90 138 209 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB23.ampDAP:M0855:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtHB32.DAP/M0856/AthalianaCistrome XX ID AtHB32.DAP:M0856:AthalianaCistrome XX NA AtHB32.DAP XX DE AtHB32.DAP XX OS Arabidopsis thaliana XX BF 12370; XX P0 A C G T 01 368 34 22 176 w 02 361 19 20 200 w 03 211 82 47 260 w 04 14 519 20 47 C 05 59 0 533 8 G 06 194 237 2 167 h 07 509 0 91 0 A 08 0 0 0 600 T 09 250 15 24 311 w 10 429 4 0 167 W 11 18 19 11 552 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtHB32.DAP:M0856:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB24.ampDAP/M0858/AthalianaCistrome XX ID ATHB24.ampDAP:M0858:AthalianaCistrome XX NA ATHB24.ampDAP XX DE ATHB24.ampDAP XX OS Arabidopsis thaliana XX BF 12324; XX P0 A C G T 01 400 48 28 124 a 02 354 53 47 146 a 03 295 53 47 205 w 04 236 111 82 171 w 05 240 39 200 121 r 06 6 14 0 580 T 07 496 10 94 0 A 08 592 0 8 0 A 09 0 0 0 600 T 10 0 0 0 600 T 11 597 0 2 1 A 12 451 0 134 15 A 13 67 101 136 296 t 14 182 69 123 226 w 15 340 38 62 160 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB24.ampDAP:M0858:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB33.ampDAP/M0859/AthalianaCistrome XX ID ATHB33.ampDAP:M0859:AthalianaCistrome XX NA ATHB33.ampDAP XX DE ATHB33.ampDAP XX OS Arabidopsis thaliana XX BF 12326; XX P0 A C G T 01 281 46 35 223 w 02 321 71 46 147 w 03 289 66 55 175 w 04 229 98 86 172 w 05 220 126 102 137 a 06 147 180 104 154 h 07 227 30 254 74 r 08 0 14 0 571 T 09 331 72 182 0 r 10 580 0 5 0 A 11 0 0 0 585 T 12 0 0 0 585 T 13 585 0 0 0 A 14 352 22 194 17 r 15 42 153 137 253 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB33.ampDAP:M0859:AthalianaCistrome XX RN [1]; RX PUBMED: 27203113 RL O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PROTEIN/1vol_AB/3D-footprint XX ID PROTEIN:1vol_AB:3D-footprint XX NA PROTEIN XX DE TFIIB (HUMAN CORE DOMAIN)/TBP (A.THALIANA)/TATA ELEMENT TERNARY COMPLEX XX BF 9320; XX P0 A C G T 01 0 64 16 16 c 02 0 0 0 96 T 03 16 16 16 48 t 04 0 0 0 96 T 05 0 0 0 96 T 06 96 0 0 0 A 07 0 0 0 96 T 08 96 0 0 0 A XX BS 26614; BS 26615; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PROTEIN:1vol_AB:3D-footprint XX RN [1]; RX PUBMED: 7675079 RL Nikolov D.B, Chen H, Halay E.D, Usheva A.A, Hisatake K, Lee D.K, Roeder R.G, Burley S.K. Crystal structure of a TFIIB-TBP-TATA-element ternary complex. Nature 377:119-28 (1995). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Lysine-specific/6jnl_A/3D-footprint XX ID Lysine-specific:6jnl_A:3D-footprint XX NA Lysine-specific XX DE REF6 ZnF2-4-NAC004 complex XX BF 17851; XX P0 A C G T 01 48 16 16 16 a 02 0 80 0 16 C 03 96 0 0 0 A 04 16 0 80 0 G 05 96 0 0 0 A 06 0 0 96 0 G XX BS 61248; BS 61249; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Lysine-specific:6jnl_A:3D-footprint XX RN [1]; RX PUBMED: 31048693 RL Qiu Q, Mei H, Deng X, He K, Wu B, Yao Q, Zhang J, Lu F, Ma J, Cao X. DNA methylation repels targeting of Arabidopsis REF6. Nat Commun 10:2063 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TATA/1vtl_E/3D-footprint XX ID TATA:1vtl_E:3D-footprint XX NA TATA XX DE CO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT XX BF 9364; XX P0 A C G T 01 0 0 0 96 T 02 96 0 0 0 A 03 0 0 0 96 T 04 96 0 0 0 A 05 96 0 0 0 A 06 48 16 16 16 a 07 96 0 0 0 A 08 16 16 64 0 g XX BS 26561; BS 26562; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TATA:1vtl_E:3D-footprint XX RN [1]; RX PUBMED: 8413605 RL Kim J.L, Nikolov D.B, Burley S.K. Co-crystal structure of TBP recognizing the minor groove of a TATA element. Nature 365:520-7 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Transcription/5gnj_AB/3D-footprint XX ID Transcription:5gnj_AB:3D-footprint XX NA Transcription XX DE Structure of a transcription factor and DNA complex XX BF 17573; BF 17574; XX P0 A C G T 01 12 12 12 60 t 02 60 12 12 12 a 03 0 96 0 0 C 04 96 0 0 0 A 05 12 84 0 0 C 06 0 0 96 0 G 07 0 0 0 96 T 08 0 0 96 0 G XX BS 60750; BS 60751; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Transcription:5gnj_AB:3D-footprint XX RN [1]; RX PUBMED: 28514654 RL Lian TF, Xu YP, Li LF, Su XD. Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA. Cell Rep 19:1334-1342 (2017). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B3/6j9a_A/3D-footprint XX ID B3:6j9a_A:3D-footprint XX NA B3 XX DE Crystal structure of Arabidopsis thaliana VAL1 in complex with FLC DNA fragment XX BF 17875; XX P0 A C G T 01 7 81 4 4 C 02 85 3 3 5 A 03 8 7 7 74 T 04 0 0 96 0 G 05 2 88 2 4 C 06 42 18 18 18 a XX BS 60955; BS 60956; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B3:6j9a_A:3D-footprint XX RN [1]; RX PUBMED: 30962525 RL Tao Z, Hu H, Luo X, Jia B, Du J, He Y. Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis. Nat Plants 5:424-435 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B3/6j9b_A/3D-footprint XX ID B3:6j9b_A:3D-footprint XX NA B3 XX DE Arabidopsis FUS3-DNA complex XX BF 17876; XX P0 A C G T 01 12 60 12 12 c 02 96 0 0 0 A 03 0 0 0 96 T 04 0 12 84 0 G 05 0 96 0 0 C 06 60 12 12 12 a XX BS 60955; BS 60956; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B3:6j9b_A:3D-footprint XX RN [1]; RX PUBMED: 30962525 RL Tao Z, Hu H, Luo X, Jia B, Du J, He Y. Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis. Nat Plants 5:424-435 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B3/6j9c_D/3D-footprint XX ID B3:6j9c_D:3D-footprint XX NA B3 XX DE Crystal structure of Arabidopsis thaliana transcription factor LEC2-DNA complex XX BF 17877; XX P0 A C G T 01 16 16 16 48 t 02 0 0 96 0 G 03 0 96 0 0 C 04 96 0 0 0 A 05 16 0 0 80 T 06 16 0 80 0 G XX BS 60955; BS 60956; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B3:6j9c_D:3D-footprint XX RN [1]; RX PUBMED: 30962525 RL Tao Z, Hu H, Luo X, Jia B, Du J, He Y. Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis. Nat Plants 5:424-435 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Lysine-specific/6jnn_B/3D-footprint XX ID Lysine-specific:6jnn_B:3D-footprint XX NA Lysine-specific XX DE REF6 ZnF2-4-NAC004-mC1 complex XX BF 17851; XX P0 A C G T 01 39 19 19 19 a 02 96 0 0 0 A 03 0 96 0 0 C 04 96 0 0 0 A 05 3 3 85 5 G 06 72 8 8 8 A XX BS 61248; BS 61382; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Lysine-specific:6jnn_B:3D-footprint XX RN [1]; RX PUBMED: 31048693 RL Qiu Q, Mei H, Deng X, He K, Wu B, Yao Q, Zhang J, Lu F, Ma J, Cao X. DNA methylation repels targeting of Arabidopsis REF6. Nat Commun 10:2063 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAV1/RAV1/1)(Athamap XX ID RAV1:RAV1:1)(Athamap XX NA RAV1 XX DE 5'-part of bipartite RAV1 binding site, interacting with AP2 domain XX OS Arabidopsis thaliana XX BF 1274; XX P0 A C G T 01 14 17 12 6 m 02 16 11 10 14 w 03 7 14 35 1 g 04 0 62 0 0 C 05 47 12 9 0 A 06 62 4 3 0 A 07 0 69 0 0 C 08 69 0 0 0 A 09 9 7 32 21 k 10 41 4 4 20 w 11 34 6 10 19 w 12 27 9 17 16 a XX BS 54699; BS 54700; BS 54701; BS 54702; BS 54703; BS 54704; BS 54705; BS 54706; BS 54707; BS 54708; BS 54709; BS 54710; BS 54711; BS 54712; BS 54713; BS 54714; BS 54715; BS 54716; BS 54717; BS 54718; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAV1:RAV1:1)(Athamap XX CC sequences selected with recombinant RAV1 from a pool of double-stranded oligonucleotides containing a core of 30 random nucleotides; 6 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 9862967 RL Kagaya Y., Ohmiya K., Hattori T. RAV1, a Novel DNA-Binding Protein, Binds to Bipartite Recognition Sequence through Two Distinct DNA-Binding Domains Uniquely Found in Higher Plants. Nucleic Acids Res. 27:470-478 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-5/MA0110.3/JASPAR XX ID ATHB-5:MA0110.3:JASPAR XX NA ATHB-5 XX DE ATHB-5 XX OS Arabidopsis thaliana XX BF 3982; XX P0 A C G T 01 3639 1914 1346 3223 w 02 2718 2228 1336 3840 w 03 1051 7517 386 1168 C 04 9632 197 74 219 A 05 9563 154 50 355 A 06 230 98 59 9735 T 07 841 8049 254 978 C 08 9809 48 51 214 A 09 648 178 175 9121 T 10 633 312 394 8783 T 11 3099 1661 2309 3053 w 12 3606 1561 1609 3346 w XX BS 61761; BS 61762; BS 61763; BS 61764; BS 61765; BS 61766; BS 61767; BS 61768; BS 61769; BS 61770; BS 61771; BS 61772; BS 61773; BS 61774; BS 61775; BS 61776; BS 61777; BS 61778; BS 61779; BS 61780; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-5:MA0110.3:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FUS3/MA0565.2/JASPAR XX ID FUS3:MA0565.2:JASPAR XX NA FUS3 XX DE FUS3 XX OS Arabidopsis thaliana XX BF 7508; XX P0 A C G T 01 469 152 218 307 w 02 355 309 143 339 h 03 1146 0 0 0 A 04 0 1146 0 0 C 05 1141 2 2 1 A 06 3 5 1 1137 T 07 0 1 1145 0 G 08 0 1146 0 0 C 09 1055 18 28 45 A 10 446 125 98 477 w XX BS 62303; BS 62304; BS 62305; BS 62306; BS 62307; BS 62308; BS 62309; BS 62310; BS 62311; BS 62312; BS 62313; BS 62314; BS 62315; BS 62316; BS 62317; BS 62318; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FUS3:MA0565.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF1/MA0570.2/JASPAR XX ID ABF1:MA0570.2:JASPAR XX NA ABF1 XX DE ABF1 XX OS Arabidopsis thaliana XX BF 3856; XX P0 A C G T 01 593 284 60 204 a 02 83 793 124 141 C 03 1123 4 11 3 A 04 10 1099 15 17 C 05 16 9 1107 9 G 06 4 8 1 1128 T 07 9 3 1123 6 G 08 39 11 707 384 k 09 81 999 28 33 C 10 909 36 117 79 A 11 348 195 234 364 w 12 358 213 225 345 w XX BS 62319; BS 62320; BS 62321; BS 62322; BS 62323; BS 62324; BS 62325; BS 62326; BS 62327; BS 62328; BS 62329; BS 62330; BS 62331; BS 62332; BS 62333; BS 62334; BS 62335; BS 62336; BS 62337; BS 62338; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF1:MA0570.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAV1/RAV1/2)(Athamap XX ID RAV1:RAV1:2)(Athamap XX NA RAV1 XX DE 3'-part of bipartite RAV1 binding site, interacting with AP2 domain XX OS Arabidopsis thaliana XX BF 1274; XX P0 A C G T 01 22 12 10 18 w 02 13 15 8 28 t 03 8 49 1 7 C 04 40 6 8 11 a 05 1 56 3 5 C 06 0 65 0 0 C 07 0 0 0 65 T 08 0 0 58 0 G 09 24 7 19 5 r 10 12 15 18 9 s 11 12 14 16 10 s 12 8 20 5 13 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAV1:RAV1:2)(Athamap XX CC sequences selected with recombinant RAV1 from a pool of double-stranded oligonucleotides containing a core of 30 random nucleotides; 6 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 9862967 RL Kagaya Y., Ohmiya K., Hattori T. RAV1, a Novel DNA-Binding Protein, Binds to Bipartite Recognition Sequence through Two Distinct DNA-Binding Domains Uniquely Found in Higher Plants. Nucleic Acids Res. 27:470-478 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDF3/MA0974.2/JASPAR XX ID CDF3:MA0974.2:JASPAR XX NA CDF3 XX DE CDF3 XX OS Arabidopsis thaliana XX BF 11002; XX P0 A C G T 01 396 166 213 382 w 02 337 214 256 350 w 03 879 63 79 136 A 04 964 24 29 140 A 05 1143 2 7 5 A 06 1133 4 11 9 A 07 1125 3 19 10 A 08 1 0 1154 2 G 09 29 44 37 1047 T 10 86 7 1038 26 G 11 430 210 104 413 w 12 519 186 130 322 w XX BS 62890; BS 62891; BS 62892; BS 62893; BS 62894; BS 62895; BS 62896; BS 62897; BS 62898; BS 62899; BS 62900; BS 62901; BS 62902; BS 62903; BS 62904; BS 62905; BS 62906; BS 62907; BS 62908; BS 62909; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDF3:MA0974.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CRF4/MA0976.2/JASPAR XX ID CRF4:MA0976.2:JASPAR XX NA CRF4 XX DE CRF4 XX OS Arabidopsis thaliana XX BF 10425; XX P0 A C G T 01 165 1167 247 321 c 02 249 1377 111 163 C 03 89 4 1744 63 G 04 4 1865 22 9 C 05 10 1866 15 9 C 06 113 2 1734 51 G 07 10 1794 9 87 C 08 55 1804 16 25 C 09 1104 12 653 131 r 10 67 1659 40 134 C 11 331 1002 198 369 c 12 612 168 757 363 r XX BS 62910; BS 62911; BS 62912; BS 62913; BS 62914; BS 62915; BS 62916; BS 62917; BS 62918; BS 62919; BS 62920; BS 62921; BS 62922; BS 62923; BS 62924; BS 62925; BS 62926; BS 62927; BS 62928; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CRF4:MA0976.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2-10/MA0980.2/JASPAR XX ID RAP2-10:MA0980.2:JASPAR XX NA RAP2-10 XX DE RAP2-10 XX OS Arabidopsis thaliana XX BF 5593; XX P0 A C G T 01 477 694 291 1106 y 02 467 733 280 1088 y 03 1041 48 1374 105 r 04 16 2516 6 30 C 05 9 2544 9 6 C 06 16 6 2534 12 G 07 2503 19 10 36 A 08 10 2539 7 12 C 09 2443 29 65 31 A 10 1212 510 306 540 a 11 933 458 409 768 w 12 906 381 545 736 w XX BS 62929; BS 62930; BS 62931; BS 62932; BS 62933; BS 62934; BS 62935; BS 62936; BS 62937; BS 62938; BS 62939; BS 62940; BS 62941; BS 62942; BS 62943; BS 62944; BS 62945; BS 62946; BS 62947; BS 62948; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2-10:MA0980.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF4/MA0992.2/JASPAR XX ID ERF4:MA0992.2:JASPAR XX NA ERF4 XX DE ERF4 XX OS Arabidopsis thaliana XX BF 7507; XX P0 A C G T 01 227 109 368 319 k 02 88 644 165 126 c 03 11 1005 2 5 C 04 24 1 979 19 G 05 5 992 9 17 C 06 5 1015 2 1 C 07 9 0 1006 8 G 08 34 349 13 627 y 09 42 900 25 56 C 10 827 19 91 86 A 11 253 306 101 363 y 12 318 287 113 305 h XX BS 62949; BS 62950; BS 62951; BS 62952; BS 62953; BS 62954; BS 62955; BS 62956; BS 62957; BS 62958; BS 62959; BS 62960; BS 62961; BS 62962; BS 62963; BS 62964; BS 62965; BS 62966; BS 62967; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF4:MA0992.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF039/MA0995.2/JASPAR XX ID ERF039:MA0995.2:JASPAR XX NA ERF039 XX DE ERF039 XX OS Arabidopsis thaliana XX BF 2592; XX P0 A C G T 01 282 574 258 530 y 02 285 875 168 316 c 03 679 23 864 78 r 04 3 1617 23 1 C 05 11 1605 10 18 C 06 19 13 1605 7 G 07 1381 137 45 81 A 08 1 1615 15 13 C 09 1521 21 72 30 A 10 495 533 236 380 m 11 484 420 278 462 h XX BS 62968; BS 62969; BS 62970; BS 62971; BS 62972; BS 62973; BS 62974; BS 62975; BS 62976; BS 62977; BS 62978; BS 62979; BS 62980; BS 62981; BS 62982; BS 62983; BS 62984; BS 62985; BS 62986; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF039:MA0995.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF11/MA1001.2/JASPAR XX ID ERF11:MA1001.2:JASPAR XX NA ERF11 XX DE ERF11 XX OS Arabidopsis thaliana XX BF 10415; XX P0 A C G T 01 312 136 455 377 k 02 151 728 203 198 c 03 19 1243 8 10 C 04 30 1 1218 31 G 05 8 1230 23 19 C 06 7 1269 2 2 C 07 16 0 1252 12 G 08 33 331 22 894 Y 09 63 1081 40 96 C 10 998 28 134 120 A 11 323 407 136 414 h 12 373 391 160 356 h XX BS 62949; BS 62987; BS 62988; BS 62989; BS 62967; BS 62950; BS 62951; BS 62952; BS 62990; BS 62953; BS 62954; BS 62991; BS 62955; BS 62992; BS 62993; BS 62959; BS 62964; BS 62965; BS 62994; BS 62995; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF11:MA1001.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF3/MA1005.2/JASPAR XX ID ERF3:MA1005.2:JASPAR XX NA ERF3 XX DE ERF3 XX OS Arabidopsis thaliana XX BF 7506; XX P0 A C G T 01 519 229 644 491 d 02 162 1145 257 319 c 03 113 1713 16 41 C 04 186 8 1658 31 G 05 0 1878 3 2 C 06 30 1844 1 8 C 07 149 2 1697 35 G 08 2 1852 7 22 C 09 12 1852 1 18 C 10 658 48 925 252 r 11 239 887 194 563 y XX BS 62996; BS 62997; BS 62998; BS 62999; BS 63000; BS 63001; BS 63002; BS 63003; BS 63004; BS 63005; BS 63006; BS 63007; BS 63008; BS 63009; BS 63010; BS 63011; BS 63012; BS 63013; BS 63014; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF3:MA1005.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA5/MA1047.2/JASPAR XX ID TGA5:MA1047.2:JASPAR XX NA TGA5 XX DE TGA5 XX OS Arabidopsis thaliana XX BF 10645; XX P0 A C G T 01 1135 511 554 912 w 02 818 560 537 1197 w 03 648 382 1574 508 g 04 1934 540 474 164 a 05 19 57 10 3026 T 06 41 26 2769 276 G 07 3036 11 23 42 A 08 4 2802 22 284 C 09 288 16 2804 4 G 10 28 23 16 3045 T 11 273 2650 140 49 C 12 2907 9 147 49 A 13 206 973 612 1321 y 14 669 1257 443 743 c 15 1121 530 603 858 w XX BS 63015; BS 63016; BS 63017; BS 63018; BS 63019; BS 63020; BS 63021; BS 63022; BS 63023; BS 63024; BS 63025; BS 63026; BS 63027; BS 63028; BS 63029; BS 63030; BS 63031; BS 63032; BS 63033; BS 63034; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA5:MA1047.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP15/MA1062.2/JASPAR XX ID TCP15:MA1062.2:JASPAR XX NA TCP15 XX DE TCP15 XX OS Arabidopsis thaliana XX BF 5383; XX P0 A C G T 01 280 141 171 235 w 02 254 182 159 232 w 03 366 127 128 206 a 04 286 141 158 242 w 05 99 43 660 25 G 06 11 41 10 765 T 07 77 4 736 10 G 08 2 1 823 1 G 09 24 3 788 12 G 10 317 134 135 241 w 11 11 785 4 27 C 12 3 821 1 2 C 13 8 732 5 82 C 14 762 6 48 11 A 15 27 654 46 100 C 16 246 157 137 287 w 17 212 133 116 366 w 18 246 156 170 255 w 19 237 175 140 275 w XX BS 63035; BS 63036; BS 63037; BS 63038; BS 63039; BS 63040; BS 63041; BS 63042; BS 63043; BS 63044; BS 63045; BS 63046; BS 63047; BS 63048; BS 63049; BS 63050; BS 63051; BS 63052; BS 63053; BS 63054; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP15:MA1062.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP20/MA1065.2/JASPAR XX ID TCP20:MA1065.2:JASPAR XX NA TCP20 XX DE TCP20 XX OS Arabidopsis thaliana XX BF 3891; XX P0 A C G T 01 328 170 215 257 w 02 303 228 187 252 w 03 406 165 156 243 w 04 332 176 198 264 w 05 106 52 767 45 G 06 19 53 12 886 T 07 77 7 877 9 G 08 4 1 962 3 G 09 37 3 914 16 G 10 379 158 159 274 w 11 13 915 4 38 C 12 4 962 0 4 C 13 9 876 4 81 C 14 887 8 61 14 A 15 35 769 60 106 C 16 358 181 172 259 w 17 272 145 157 396 w 18 277 181 215 297 w 19 271 222 158 319 w XX BS 63035; BS 63055; BS 63054; BS 63036; BS 63037; BS 63038; BS 63056; BS 63057; BS 63039; BS 63040; BS 63041; BS 63046; BS 63042; BS 63058; BS 63059; BS 63050; BS 63051; BS 63052; BS 63053; BS 63060; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP20:MA1065.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY15/MA1076.2/JASPAR XX ID WRKY15:MA1076.2:JASPAR XX NA WRKY15 XX DE WRKY15 XX OS Arabidopsis thaliana XX BF 11971; XX P0 A C G T 01 403 201 271 365 w 02 395 254 197 394 w 03 426 250 201 363 w 04 489 192 175 384 w 05 521 127 163 429 w 06 583 58 515 84 r 07 15 7 1210 8 G 08 2 8 3 1227 T 09 9 1222 2 7 C 10 1221 8 4 7 A 11 1218 3 11 8 A 12 65 1088 8 79 C 13 100 88 893 159 G 14 330 246 338 326 d 15 309 305 189 437 t 16 350 182 296 412 w XX BS 63061; BS 63062; BS 63063; BS 63064; BS 63065; BS 63066; BS 63067; BS 63068; BS 63069; BS 63070; BS 63071; BS 63072; BS 63073; BS 63074; BS 63075; BS 63076; BS 63077; BS 63078; BS 63079; BS 63080; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY15:MA1076.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF027/MA1227.2/JASPAR XX ID ERF027:MA1227.2:JASPAR XX NA ERF027 XX DE ERF027 XX OS Arabidopsis thaliana XX BF 12259; XX P0 A C G T 01 2281 2065 1253 2566 h 02 2124 1440 1886 2715 w 03 1537 1971 999 3658 t 04 1018 2217 799 4131 y 05 2993 257 4656 259 r 06 59 7829 39 238 C 07 49 8069 15 32 C 08 38 30 8067 30 G 09 7473 249 83 360 A 10 27 8089 22 27 C 11 7176 100 562 327 A 12 2884 1583 1063 2635 w 13 2750 1629 1362 2424 w 14 2824 1225 1823 2293 w 15 2512 1635 1448 2570 w XX BS 63239; BS 63240; BS 63241; BS 63242; BS 63243; BS 63244; BS 63245; BS 63246; BS 63247; BS 63248; BS 63249; BS 63250; BS 63251; BS 63252; BS 63253; BS 63254; BS 63255; BS 63256; BS 63257; BS 63258; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF027:MA1227.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF021/MA1233.2/JASPAR XX ID ERF021:MA1233.2:JASPAR XX NA ERF021 XX DE ERF021 XX OS Arabidopsis thaliana XX BF 12271; XX P0 A C G T 01 723 1062 509 865 y 02 777 1231 362 789 c 03 756 363 1265 775 g 04 424 1691 388 656 c 05 186 2340 102 531 C 06 889 15 2078 177 r 07 38 3024 76 21 C 08 19 3113 14 13 C 09 56 8 3076 19 G 10 2213 500 104 342 A 11 27 3048 44 40 C 12 2867 54 158 80 A 13 1271 837 299 752 m 14 1020 831 545 763 m 15 1024 461 885 789 r XX BS 63259; BS 63260; BS 63261; BS 63262; BS 63263; BS 63264; BS 63265; BS 63266; BS 63267; BS 63268; BS 63269; BS 63270; BS 63271; BS 63272; BS 63273; BS 63274; BS 63275; BS 63276; BS 63277; BS 63278; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF021:MA1233.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF38/MA1238.2/JASPAR XX ID ERF38:MA1238.2:JASPAR XX NA ERF38 XX DE ERF38 XX OS Arabidopsis thaliana XX BF 5578; XX P0 A C G T 01 575 277 497 561 d 02 259 811 246 594 y 03 123 1622 64 101 C 04 1691 0 197 22 A 05 7 1892 4 7 C 06 11 1895 1 3 C 07 17 5 1882 6 G 08 1631 120 30 129 A 09 16 1883 4 7 C 10 1588 35 202 85 A 11 673 562 280 395 m 12 621 465 272 552 w 13 608 277 494 531 d XX BS 63279; BS 63280; BS 63281; BS 63282; BS 63283; BS 63284; BS 63285; BS 63286; BS 63287; BS 63288; BS 63289; BS 63290; BS 63291; BS 63292; BS 63293; BS 63294; BS 63295; BS 63296; BS 63297; BS 63298; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF38:MA1238.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT2G33710/MA1245.2/JASPAR XX ID AT2G33710:MA1245.2:JASPAR XX NA AT2G33710 XX DE AT2G33710 XX OS Arabidopsis thaliana XX BF 10420; XX P0 A C G T 01 641 302 895 657 d 02 217 1507 361 410 c 03 168 2246 33 48 C 04 253 20 2173 49 G 05 1 2454 37 3 C 06 38 2449 1 7 C 07 219 3 2236 37 G 08 7 2446 14 28 C 09 38 2406 3 48 C 10 831 73 1264 327 r 11 304 1165 243 783 y XX BS 63299; BS 63009; BS 63300; BS 63301; BS 63302; BS 63303; BS 63012; BS 63304; BS 63305; BS 63014; BS 62997; BS 63306; BS 62998; BS 63307; BS 63308; BS 63309; BS 63310; BS 63010; BS 63011; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT2G33710:MA1245.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF015/MA1265.2/JASPAR XX ID ERF015:MA1265.2:JASPAR XX NA ERF015 XX DE ERF015 XX OS Arabidopsis thaliana XX BF 12357; XX P0 A C G T 01 375 146 356 341 d 02 130 594 153 341 y 03 26 1145 18 29 C 04 1121 0 73 24 A 05 3 1209 2 4 C 06 6 1209 0 3 C 07 9 1 1205 3 G 08 897 141 24 156 A 09 11 1201 3 3 C 10 1001 30 132 55 A 11 438 361 181 238 m 12 384 330 147 357 h XX BS 63311; BS 63312; BS 63313; BS 63314; BS 63315; BS 62990; BS 63316; BS 63317; BS 63318; BS 63319; BS 63320; BS 63321; BS 63322; BS 63323; BS 63324; BS 63325; BS 63326; BS 63327; BS 63328; BS 63329; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF015:MA1265.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY28/MA1311.2/JASPAR XX ID WRKY28:MA1311.2:JASPAR XX NA WRKY28 XX DE WRKY28 XX OS Arabidopsis thaliana XX BF 12546; XX P0 A C G T 01 929 287 243 633 w 02 901 240 240 711 w 03 919 67 924 182 r 04 21 11 2047 13 G 05 6 8 1 2077 T 06 12 2062 8 10 C 07 2059 17 6 10 A 08 2050 7 18 17 A 09 158 1730 55 149 C 10 596 254 740 502 r 11 694 436 330 632 w XX BS 63330; BS 63331; BS 63332; BS 63333; BS 63334; BS 63335; BS 63336; BS 63337; BS 63338; BS 63339; BS 63340; BS 63341; BS 63342; BS 63343; BS 63344; BS 63345; BS 63346; BS 63347; BS 63348; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY28:MA1311.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB23/MA1327.2/JASPAR XX ID ATHB23:MA1327.2:JASPAR XX NA ATHB23 XX DE ATHB23 XX OS Arabidopsis thaliana XX BF 14247; XX P0 A C G T 01 660 381 278 1113 w 02 466 226 103 1637 t 03 2432 0 0 0 A 04 2432 0 0 0 A 05 0 0 0 2432 T 06 0 0 0 2432 T 07 2432 0 0 0 A 08 2432 0 0 0 A 09 646 310 374 1102 w 10 670 397 302 1063 w XX BS 63349; BS 63350; BS 63351; BS 63352; BS 63353; BS 63354; BS 63355; BS 63356; BS 63357; BS 63358; BS 63359; BS 63360; BS 63361; BS 63362; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB23:MA1327.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZHD1/MA1329.2/JASPAR XX ID ZHD1:MA1329.2:JASPAR XX NA ZHD1 XX DE ZHD1 XX OS Arabidopsis thaliana XX BF 18201; XX P0 A C G T 01 834 351 309 978 w 02 967 422 333 750 w 03 1813 246 193 220 A 04 386 1155 193 738 y 05 47 24 9 2392 T 06 2412 14 26 20 A 07 2417 15 18 22 A 08 25 29 9 2409 T 09 19 43 12 2398 T 10 2382 14 25 51 A 11 2233 73 60 106 A 12 562 402 473 1035 t 13 691 423 370 988 w XX BS 63363; BS 63364; BS 63365; BS 63366; BS 63367; BS 63368; BS 63369; BS 63370; BS 63371; BS 63372; BS 63373; BS 63374; BS 63375; BS 63376; BS 63377; BS 63378; BS 63379; BS 63380; BS 63381; BS 63382; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZHD1:MA1329.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRP1/MA1352.1/JASPAR XX ID TRP1:MA1352.1:JASPAR XX NA TRP1 XX DE TRP1 XX OS Arabidopsis thaliana XX BF 12527; XX P0 A C G T 01 253 4 8 42 A 02 19 250 11 27 C 03 17 263 14 13 C 04 30 218 11 48 C 05 29 0 3 275 T 06 302 0 2 3 A 07 304 0 1 2 A 08 307 0 0 0 A 09 4 302 0 1 C 10 13 290 0 4 C 11 1 296 6 4 C 12 3 2 2 300 T 13 296 2 2 7 A 14 295 9 2 1 A 15 306 0 0 1 A 16 3 288 1 15 C 17 6 292 4 5 C 18 24 272 0 11 C 19 13 8 1 285 T 20 290 4 6 7 A 21 263 8 28 8 A XX BS 58522; BS 58523; BS 58524; BS 58525; BS 58526; BS 58527; BS 58528; BS 58529; BS 58530; BS 58531; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRP1:MA1352.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G72740/MA1353.1/JASPAR XX ID AT1G72740:MA1353.1:JASPAR XX NA AT1G72740 XX DE AT1G72740 XX OS Arabidopsis thaliana XX BF 12272; XX P0 A C G T 01 187 94 223 96 r 02 187 71 242 100 r 03 278 23 230 69 r 04 254 10 77 259 w 05 2 107 1 490 T 06 3 1 0 596 T 07 595 0 4 1 A 08 0 1 599 0 G 09 0 0 597 3 G 10 0 3 566 31 G 11 1 28 0 571 T 12 22 1 0 577 T 13 77 33 19 471 T 14 229 120 73 178 w 15 76 82 281 161 k XX BS 58532; BS 58533; BS 58534; BS 58535; BS 58536; BS 58537; BS 58538; BS 58539; BS 58540; BS 58541; BS 58542; BS 58543; BS 58544; BS 58545; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G72740:MA1353.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TBP3/MA1355.1/JASPAR XX ID TBP3:MA1355.1:JASPAR XX NA TBP3 XX DE TBP3 XX OS Arabidopsis thaliana XX BF 17518; XX P0 A C G T 01 275 91 69 163 w 02 247 122 50 179 w 03 183 146 50 219 w 04 120 85 93 300 t 05 320 8 90 180 w 06 399 3 1 195 w 07 353 0 245 0 r 08 45 553 0 0 C 09 0 598 0 0 C 10 0 598 0 0 C 11 0 0 0 598 T 12 598 0 0 0 A 13 505 0 91 2 A 14 197 92 11 298 w 15 92 121 28 357 t XX BS 58546; BS 58547; BS 58548; BS 58549; BS 58550; BS 58551; BS 58552; BS 58553; BS 58554; BS 58555; BS 58556; BS 58557; BS 58558; BS 58559; BS 58560; BS 58561; BS 58562; BS 58563; BS 58564; BS 58565; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TBP3:MA1355.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRP2/MA1356.1/JASPAR XX ID TRP2:MA1356.1:JASPAR XX NA TRP2 XX DE TRP2 XX OS Arabidopsis thaliana XX BF 12528; XX P0 A C G T 01 335 34 21 35 A 02 317 24 18 66 A 03 44 303 22 56 C 04 23 344 28 30 C 05 47 272 15 91 c 06 72 0 4 349 T 07 423 0 1 1 A 08 419 1 2 3 A 09 422 2 0 1 A 10 7 416 0 2 C 11 6 414 2 3 C 12 0 416 0 9 C 13 4 3 0 418 T 14 407 2 13 3 A 15 422 1 2 0 A 16 409 4 2 10 A 17 27 350 1 47 C 18 18 383 0 24 C 19 54 303 7 61 C 20 37 43 7 338 T 21 337 28 15 45 A XX BS 58566; BS 58567; BS 58568; BS 58569; BS 58570; BS 58571; BS 58572; BS 58573; BS 58574; BS 58575; BS 58576; BS 58577; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRP2:MA1356.1:JASPAR XX CC DAP-seq XX RN [1]; RX PUBMED: 22197883 RL Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G47660/MA1365.2/JASPAR XX ID AT5G47660:MA1365.2:JASPAR XX NA AT5G47660 XX DE AT5G47660 XX OS Arabidopsis thaliana XX BF 11391; XX P0 A C G T 01 2448 540 1096 1345 a 02 1466 1149 808 2006 w 03 549 76 4639 165 G 04 0 0 5429 0 G 05 0 14 0 5415 T 06 5302 30 38 59 A 07 5236 8 50 135 A 08 4920 23 104 382 A 09 4790 1 34 604 A 10 2233 631 685 1880 w 11 2014 822 679 1914 w XX BS 63383; BS 63384; BS 63385; BS 63386; BS 63387; BS 63388; BS 63389; BS 63390; BS 63391; BS 63392; BS 63393; BS 63394; BS 63395; BS 63396; BS 63397; BS 63398; BS 63399; BS 63400; BS 63401; BS 63402; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G47660:MA1365.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT-4/MA1368.2/JASPAR XX ID GT-4:MA1368.2:JASPAR XX NA GT-4 XX DE GT-4 XX OS Arabidopsis thaliana XX BF 11390; XX P0 A C G T 01 209 130 110 197 w 02 77 157 89 323 t 03 111 55 37 443 T 04 516 20 44 66 A 05 621 6 4 15 A 06 10 612 9 15 C 07 8 181 2 455 Y 08 571 24 28 23 A 09 20 26 33 567 T 10 87 1 552 6 G 11 20 5 618 3 G 12 9 5 3 629 T 13 63 36 11 536 T 14 396 41 63 146 a XX BS 63403; BS 63404; BS 63405; BS 63406; BS 63407; BS 63408; BS 63409; BS 63410; BS 63411; BS 63412; BS 63413; BS 63414; BS 63415; BS 63416; BS 63417; BS 63418; BS 63419; BS 63420; BS 63421; BS 63422; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT-4:MA1368.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB33/MA1391.2/JASPAR XX ID MYB33:MA1391.2:JASPAR XX NA MYB33 XX DE MYB33 XX OS Arabidopsis thaliana XX BF 11464; XX P0 A C G T 01 192 147 70 213 w 02 217 126 75 204 w 03 341 75 85 121 a 04 20 11 2 589 T 05 614 3 3 2 A 06 613 0 7 2 A 07 0 615 0 7 C 08 12 569 6 35 C 09 31 1 586 4 G 10 148 35 15 424 T 11 370 87 16 149 a 12 268 51 61 242 w 13 199 135 107 181 w XX BS 63423; BS 63424; BS 63425; BS 63426; BS 63427; BS 63428; BS 63429; BS 63430; BS 63431; BS 63432; BS 63433; BS 63434; BS 63435; BS 63436; BS 63437; BS 63438; BS 63439; BS 63440; BS 63441; BS 63442; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB33:MA1391.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB70/MA1393.2/JASPAR XX ID MYB70:MA1393.2:JASPAR XX NA MYB70 XX DE MYB70 XX OS Arabidopsis thaliana XX BF 17728; XX P0 A C G T 01 671 278 309 612 w 02 454 299 181 936 t 03 1560 29 116 165 A 04 1708 7 100 55 A 05 0 1848 6 16 C 06 66 1736 0 68 C 07 18 1 1849 2 G 08 137 112 71 1550 T 09 164 95 19 1592 T 10 814 179 377 500 w 11 594 364 305 607 w XX BS 63443; BS 63444; BS 63445; BS 63446; BS 63447; BS 63448; BS 63449; BS 63450; BS 63451; BS 63452; BS 63453; BS 63454; BS 63455; BS 63456; BS 63457; BS 63458; BS 63459; BS 63460; BS 63461; BS 63462; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB70:MA1393.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB73/MA1394.2/JASPAR XX ID MYB73:MA1394.2:JASPAR XX NA MYB73 XX DE MYB73 XX OS Arabidopsis thaliana XX BF 12481; XX P0 A C G T 01 298 222 192 354 w 02 274 268 46 478 h 03 1056 0 6 4 A 04 1024 36 1 5 A 05 5 1047 2 12 C 06 19 102 847 98 G 07 19 4 1026 17 G 08 16 27 4 1019 T 09 191 614 24 237 c 10 963 32 36 35 A 11 411 231 130 294 w 12 355 199 184 328 w XX BS 63463; BS 63464; BS 63465; BS 63466; BS 63467; BS 63468; BS 63469; BS 63470; BS 63471; BS 63472; BS 63473; BS 63474; BS 63475; BS 63476; BS 63477; BS 63478; BS 63479; BS 63480; BS 63481; BS 63482; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB73:MA1394.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KUA1/MA1398.2/JASPAR XX ID KUA1:MA1398.2:JASPAR XX NA KUA1 XX DE KUA1 XX OS Arabidopsis thaliana XX BF 11469; XX P0 A C G T 01 873 194 273 477 w 02 328 600 211 678 y 03 69 1567 112 69 C 04 127 61 18 1611 T 05 107 40 41 1629 T 06 1751 29 11 26 A 07 14 14 9 1780 T 08 15 1771 17 14 C 09 35 1502 27 253 C 10 943 102 335 437 a 11 633 377 174 633 w XX BS 63483; BS 63484; BS 63485; BS 63486; BS 63487; BS 63488; BS 63489; BS 63490; BS 63491; BS 63492; BS 63493; BS 63494; BS 63495; BS 63496; BS 63497; BS 63498; BS 63499; BS 63500; BS 63501; BS 63502; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KUA1:MA1398.2:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF019/MA1424.1/JASPAR XX ID ERF019:MA1424.1:JASPAR XX NA ERF019 XX DE ERF019 XX OS Arabidopsis thaliana XX BF 12332; XX P0 A C G T 01 192 468 120 218 c 02 275 97 328 298 d 03 63 528 144 263 y 04 30 949 3 16 C 05 902 0 97 0 A 06 0 1000 0 0 C 07 0 1000 0 0 C 08 0 0 1000 0 G 09 796 127 5 70 A 10 0 1000 0 0 C 11 741 90 132 35 A 12 320 359 90 229 m 13 293 288 152 265 h 14 285 172 293 248 r 15 275 330 191 203 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF019:MA1424.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HYH/MA1425.1/JASPAR XX ID HYH:MA1425.1:JASPAR XX NA HYH XX DE HYH XX OS Arabidopsis thaliana XX BF 18157; XX P0 A C G T 01 201 201 396 201 g 02 372 152 321 152 r 03 283 72 72 571 w 04 23 350 523 102 s 05 999 0 0 0 A 06 0 999 0 0 C 07 0 0 999 0 G 08 0 0 0 999 T 09 48 154 747 48 G 10 203 97 392 306 k 11 177 466 177 177 c 12 321 226 226 226 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HYH:MA1425.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB124/MA1426.1/JASPAR XX ID MYB124:MA1426.1:JASPAR XX NA MYB124 XX DE MYB124 XX OS Arabidopsis thaliana XX BF 18163; XX P0 A C G T 01 324 230 221 223 a 02 200 284 183 330 y 03 546 266 178 8 m 04 40 799 124 36 C 05 36 0 963 0 G 06 0 999 0 0 C 07 1 0 680 318 K 08 61 718 119 100 C 09 80 610 159 149 c 10 271 222 197 309 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB124:MA1426.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC028/MA1427.1/JASPAR XX ID NAC028:MA1427.1:JASPAR XX NA NAC028 XX DE NAC028 XX OS Arabidopsis thaliana XX BF 12233; XX P0 A C G T 01 273 181 364 181 r 02 0 0 0 999 T 03 0 0 95 903 T 04 90 0 909 0 G 05 0 999 0 0 C 06 0 0 899 100 G 07 0 0 0 999 T 08 480 100 419 0 r 09 171 159 69 600 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC028:MA1427.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP8/MA1428.1/JASPAR XX ID TCP8:MA1428.1:JASPAR XX NA TCP8 XX DE TCP8 XX OS Arabidopsis thaliana XX BF 18183; XX P0 A C G T 01 172 240 373 213 g 02 41 15 801 140 G 03 143 29 725 101 G 04 150 255 433 161 s 05 160 652 63 122 c 06 32 963 2 0 C 07 20 902 0 76 C 08 864 1 113 20 A 09 32 725 97 145 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP8:MA1428.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TB1/MA1430.1/JASPAR XX ID TB1:MA1430.1:JASPAR XX NA TB1 XX DE TB1 XX OS Oryza sativa XX BF 18131; XX P0 A C G T 01 0 0 999 0 G 02 0 0 999 0 G 03 84 308 518 88 s 04 0 998 0 0 C 05 0 999 0 0 C 06 41 958 0 0 C 07 37 953 0 7 C 08 153 839 4 3 C 09 143 648 13 195 c 10 385 405 119 89 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TB1:MA1430.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF4/MA1659.1/JASPAR XX ID ABF4:MA1659.1:JASPAR XX NA ABF4 XX DE ABF4 XX OS Arabidopsis thaliana XX BF 14081; XX P0 A C G T 01 1452 1325 1105 2164 t 02 970 689 2625 1762 k 03 660 5169 62 155 C 04 135 5763 86 62 C 05 5906 20 47 73 A 06 175 5666 44 161 C 07 210 166 5470 200 G 08 121 58 52 5815 T 09 610 3358 1825 253 s 10 2322 583 1360 1781 w 11 1460 1865 928 1793 y 12 1630 1901 849 1666 h XX BS 64868; BS 64869; BS 64870; BS 64871; BS 64872; BS 64873; BS 64874; BS 64875; BS 64876; BS 64877; BS 64878; BS 64879; BS 64880; BS 64881; BS 64882; BS 64883; BS 64884; BS 64885; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF4:MA1659.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC13/MA1660.1/JASPAR XX ID ANAC13:MA1660.1:JASPAR XX NA ANAC13 XX DE ANAC13 XX OS Arabidopsis thaliana XX BF 12229; XX P0 A C G T 01 398 261 175 362 w 02 303 217 306 370 d 03 223 130 229 614 t 04 101 22 24 1049 T 05 195 29 128 844 T 06 631 144 182 239 a 07 16 1172 0 8 C 08 2 9 81 1104 T 09 1 2 0 1193 T 10 41 131 964 60 G 11 134 180 101 781 t 12 164 164 224 644 t 13 207 558 198 233 c 14 240 293 138 525 t 15 295 529 197 175 c 16 23 1125 28 20 C 17 1195 0 0 1 A 18 1094 98 1 3 A 19 9 0 1181 6 G 20 250 148 120 678 t 21 875 108 15 198 A 22 1016 19 16 145 A 23 380 309 164 343 h 24 338 352 177 329 h XX BS 64886; BS 64887; BS 64888; BS 64889; BS 64890; BS 64891; BS 64892; BS 64893; BS 64894; BS 64895; BS 64896; BS 64897; BS 64898; BS 64899; BS 64900; BS 64901; BS 64902; BS 64903; BS 64904; BS 64905; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC13:MA1660.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT-GTL1/MA1661.1/JASPAR XX ID AT-GTL1:MA1661.1:JASPAR XX NA AT-GTL1 XX DE AT-GTL1 XX OS Arabidopsis thaliana XX BF 17920; XX P0 A C G T 01 492 95 203 283 w 02 314 253 127 379 w 03 24 7 1023 19 G 04 42 5 1020 6 G 05 48 3 93 929 T 06 300 17 74 682 w 07 1038 5 12 18 A 08 1033 13 10 17 A 09 996 11 13 53 A 10 954 18 23 78 A 11 409 126 138 400 w 12 356 124 193 400 w XX BS 64906; BS 64907; BS 64908; BS 64909; BS 64910; BS 64911; BS 64912; BS 64913; BS 64914; BS 64915; BS 64916; BS 64917; BS 64918; BS 64919; BS 64920; BS 64921; BS 64922; BS 64923; BS 64924; BS 64925; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT-GTL1:MA1661.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G10030/MA1662.1/JASPAR XX ID AT3G10030:MA1662.1:JASPAR XX NA AT3G10030 XX DE AT3G10030 XX OS Arabidopsis thaliana XX BF 12286; XX P0 A C G T 01 335 254 122 299 h 02 296 117 316 281 d 03 66 60 55 829 T 04 30 12 4 964 T 05 965 12 22 11 A 06 972 11 16 11 A 07 22 958 8 22 C 08 765 20 199 26 A 09 16 8 962 24 G 10 873 53 9 75 A 11 378 182 234 216 a 12 300 188 225 297 w 13 274 212 124 400 w XX BS 64926; BS 64927; BS 64928; BS 64929; BS 64930; BS 64931; BS 64932; BS 64933; BS 64934; BS 64935; BS 64936; BS 64937; BS 64938; BS 64939; BS 64940; BS 64941; BS 64942; BS 64943; BS 64944; BS 64945; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G10030:MA1662.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DPBF3/MA1668.1/JASPAR XX ID DPBF3:MA1668.1:JASPAR XX NA DPBF3 XX DE DPBF3 XX OS Arabidopsis thaliana XX BF 12251; XX P0 A C G T 01 586 245 275 539 w 02 534 282 329 500 w 03 453 369 284 539 w 04 121 197 145 1182 T 05 23 10 1489 123 G 06 227 1399 7 12 C 07 8 1633 1 3 C 08 1628 0 5 12 A 09 13 1603 15 14 C 10 17 15 1611 2 G 11 3 6 5 1631 T 12 143 929 550 23 s 13 991 18 298 338 a 14 219 461 383 582 y 15 324 914 141 266 c 16 674 253 261 457 w 17 511 316 240 578 w XX BS 64946; BS 64947; BS 64948; BS 64949; BS 64950; BS 64951; BS 64952; BS 64953; BS 64954; BS 64955; BS 64956; BS 64957; BS 64958; BS 64959; BS 64960; BS 64961; BS 64962; BS 64963; BS 64964; BS 64965; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DPBF3:MA1668.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB1B/MA1669.1/JASPAR XX ID DREB1B:MA1669.1:JASPAR XX NA DREB1B XX DE DREB1B XX OS Arabidopsis thaliana XX BF 7499; XX P0 A C G T 01 718 486 667 865 w 02 527 726 396 1087 y 03 417 789 445 1085 y 04 756 33 1879 68 R 05 15 2617 21 83 C 06 13 2711 4 8 C 07 8 14 2708 6 G 08 2607 44 34 51 A 09 10 2697 12 17 C 10 2232 108 235 161 A 11 293 194 102 2147 T 12 742 879 576 539 m 13 945 389 746 656 r 14 817 570 512 837 w XX BS 64966; BS 64967; BS 64968; BS 64969; BS 64970; BS 64971; BS 64972; BS 64973; BS 64974; BS 64975; BS 64976; BS 64977; BS 64978; BS 64979; BS 64980; BS 64981; BS 64982; BS 64983; BS 64984; BS 64985; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB1B:MA1669.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB1C/MA1670.1/JASPAR XX ID DREB1C:MA1670.1:JASPAR XX NA DREB1C XX DE DREB1C XX OS Arabidopsis thaliana XX BF 7500; XX P0 A C G T 01 2439 2044 1220 2749 w 02 2252 1566 1900 2734 w 03 1988 1872 1172 3420 t 04 1562 1719 1265 3906 t 05 2243 45 6059 105 R 06 59 7517 35 841 C 07 43 8357 15 37 C 08 43 38 8333 38 G 09 8318 50 48 36 A 10 28 8363 26 35 C 11 6267 594 647 944 A 12 1931 855 561 5105 t 13 2883 1880 1687 2002 a 14 2984 1292 1942 2234 w 15 2781 1613 1517 2541 w XX BS 64986; BS 64987; BS 63243; BS 64988; BS 64989; BS 64990; BS 63246; BS 63247; BS 64991; BS 63248; BS 63249; BS 63252; BS 63251; BS 63256; BS 63257; BS 64992; BS 64993; BS 64994; BS 63258; BS 63240; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB1C:MA1670.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF118/MA1671.1/JASPAR XX ID ERF118:MA1671.1:JASPAR XX NA ERF118 XX DE ERF118 XX OS Arabidopsis thaliana XX BF 12385; XX P0 A C G T 01 703 1819 234 643 c 02 977 385 1143 894 d 03 254 2309 354 482 c 04 30 3343 0 26 C 05 195 8 3186 10 G 06 0 3396 2 1 C 07 19 3370 3 7 C 08 170 9 3190 30 G 09 2 3338 11 48 C 10 593 1903 286 617 c 11 931 292 1537 639 r XX BS 64995; BS 64996; BS 64997; BS 64998; BS 64999; BS 65000; BS 65001; BS 65002; BS 65003; BS 65004; BS 65005; BS 65006; BS 65007; BS 65008; BS 65009; BS 65010; BS 65011; BS 65012; BS 65013; BS 65014; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF118:MA1671.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GBF2/MA1672.1/JASPAR XX ID GBF2:MA1672.1:JASPAR XX NA GBF2 XX DE GBF2 XX OS Arabidopsis thaliana XX BF 496; XX P0 A C G T 01 2246 1574 2262 1840 r 02 2324 2084 679 2835 h 03 560 2988 3420 954 s 04 7479 101 145 197 A 05 223 7122 221 356 C 06 319 107 7275 221 G 07 227 127 77 7491 T 08 174 83 7553 112 G 09 333 153 6028 1408 G 10 1027 6254 282 359 C 11 5558 596 891 877 A 12 2457 1420 1653 2392 w 13 2559 1516 1488 2359 w XX BS 65015; BS 65016; BS 65017; BS 65018; BS 65019; BS 65020; BS 65021; BS 65022; BS 65023; BS 65024; BS 65025; BS 65026; BS 65027; BS 65028; BS 65029; BS 65030; BS 65031; BS 65032; BS 65033; BS 65034; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GBF2:MA1672.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD18/MA1673.1/JASPAR XX ID LBD18:MA1673.1:JASPAR XX NA LBD18 XX DE LBD18 XX OS Arabidopsis thaliana XX BF 17723; XX P0 A C G T 01 1364 1402 922 2177 t 02 1382 2201 833 1449 c 03 501 245 4833 286 G 04 122 5323 290 130 C 05 228 5168 316 153 C 06 128 40 5531 166 G 07 105 171 5338 251 G 08 5373 93 159 240 A 09 3997 191 1009 668 A 10 4330 472 384 679 A 11 2258 1201 671 1735 w 12 1519 1189 1247 1910 w XX BS 65035; BS 65036; BS 65037; BS 65038; BS 65039; BS 65040; BS 65041; BS 65042; BS 65043; BS 65044; BS 65045; BS 65046; BS 65047; BS 65048; BS 65049; BS 65050; BS 65051; BS 65052; BS 65053; BS 65054; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD18:MA1673.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC017/MA1674.1/JASPAR XX ID NAC017:MA1674.1:JASPAR XX NA NAC017 XX DE NAC017 XX OS Arabidopsis thaliana XX BF 12231; XX P0 A C G T 01 502 268 243 450 w 02 438 189 435 401 d 03 332 212 582 337 g 04 117 16 11 1319 T 05 201 7 112 1143 T 06 658 232 157 416 w 07 3 1454 0 6 C 08 0 0 158 1305 T 09 0 2 0 1461 T 10 19 39 1398 7 G 11 215 273 226 749 t 12 323 225 363 552 t 13 341 399 389 334 s 14 554 378 211 320 m 15 756 206 274 227 a 16 9 1397 42 15 C 17 1460 1 2 0 A 18 1292 171 0 0 A 19 4 0 1454 5 G 20 393 167 239 664 w 21 1131 124 9 199 A 22 1302 17 18 126 A 23 399 419 247 398 h 24 419 429 199 416 h XX BS 64886; BS 65055; BS 65056; BS 65057; BS 65058; BS 65059; BS 65060; BS 65061; BS 65062; BS 65063; BS 65064; BS 64897; BS 65065; BS 64904; BS 64905; BS 64887; BS 64888; BS 64889; BS 64890; BS 65066; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC017:MA1674.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC029/MA1675.1/JASPAR XX ID NAC029:MA1675.1:JASPAR XX NA NAC029 XX DE NAC029 XX OS Arabidopsis thaliana XX BF 11520; XX P0 A C G T 01 116 93 78 159 w 02 235 50 54 107 a 03 41 211 81 113 y 04 444 1 0 1 A 05 11 429 4 2 C 06 6 4 428 8 G 07 22 294 42 88 c 08 421 11 5 9 A 09 422 2 2 20 A 10 7 388 22 29 C 11 30 66 16 334 T 12 103 75 93 175 t 13 148 106 74 118 w XX BS 65067; BS 65068; BS 65069; BS 65070; BS 65071; BS 65072; BS 65073; BS 65074; BS 65075; BS 65076; BS 65077; BS 65078; BS 65079; BS 65080; BS 65081; BS 65082; BS 65083; BS 65084; BS 65085; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC029:MA1675.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC062/MA1676.1/JASPAR XX ID NAC062:MA1676.1:JASPAR XX NA NAC062 XX DE NAC062 XX OS Arabidopsis thaliana XX BF 17737; XX P0 A C G T 01 216 94 166 230 w 02 215 105 150 236 w 03 108 24 21 553 T 04 112 20 46 528 T 05 167 302 86 151 c 06 8 694 1 3 C 07 1 2 5 698 T 08 2 1 0 703 T 09 495 102 86 23 A 10 386 97 92 131 a 11 170 170 142 224 t 12 195 182 140 189 h 13 240 150 139 177 w 14 132 89 106 379 t 15 21 78 76 531 T 16 700 2 0 4 A 17 702 0 0 4 A 18 1 2 696 7 G 19 141 73 67 425 t 20 541 45 13 107 A 21 565 17 16 108 A 22 177 267 61 201 h 23 192 185 90 239 h 24 243 102 126 235 w XX BS 65086; BS 65087; BS 65088; BS 65089; BS 65090; BS 65091; BS 65092; BS 65093; BS 65094; BS 65095; BS 65096; BS 65097; BS 65098; BS 65099; BS 65100; BS 65101; BS 65102; BS 65103; BS 65104; BS 65105; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC062:MA1676.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC078/MA1677.1/JASPAR XX ID NAC078:MA1677.1:JASPAR XX NA NAC078 XX DE NAC078 XX OS Arabidopsis thaliana XX BF 11523; XX P0 A C G T 01 1698 1538 929 1671 h 02 1965 1228 1361 1282 a 03 9 5734 9 84 C 04 5690 18 58 70 A 05 5496 255 22 63 A 06 1 9 5745 81 G 07 4732 228 142 734 A 08 5341 98 35 362 A 09 5581 49 57 149 A 10 1103 2610 757 1366 c 11 1772 1650 1053 1361 m 12 1780 951 1146 1959 w XX BS 65106; BS 65107; BS 65108; BS 65109; BS 65110; BS 65111; BS 65112; BS 65113; BS 65114; BS 65115; BS 65116; BS 65117; BS 65118; BS 65119; BS 65120; BS 65121; BS 65122; BS 65123; BS 65124; BS 65125; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC078:MA1677.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NTL8/MA1678.1/JASPAR XX ID NTL8:MA1678.1:JASPAR XX NA NTL8 XX DE NTL8 XX OS Arabidopsis thaliana XX BF 12494; XX P0 A C G T 01 241 143 307 228 r 02 238 157 336 188 r 03 66 21 27 805 T 04 136 7 41 735 T 05 418 120 134 247 w 06 4 913 1 1 C 07 2 38 14 865 T 08 3 3 1 912 T 09 109 526 209 75 c 10 500 131 115 173 a 11 227 269 186 237 y 12 218 246 238 217 s 13 225 190 281 223 g 14 166 111 121 521 t 15 70 203 528 118 g 16 907 3 3 6 A 17 857 17 43 2 A 18 0 1 913 5 G 19 280 146 98 395 w 20 792 24 2 101 A 21 840 19 15 45 A 22 104 586 100 129 c 23 240 306 113 260 h 24 230 129 154 406 w XX BS 65126; BS 65127; BS 65088; BS 65089; BS 65128; BS 65129; BS 65130; BS 65131; BS 65132; BS 65133; BS 65134; BS 65135; BS 65136; BS 65137; BS 65138; BS 65139; BS 65140; BS 65141; BS 65142; BS 65143; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NTL8:MA1678.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2-1/MA1679.1/JASPAR XX ID RAP2-1:MA1679.1:JASPAR XX NA RAP2-1 XX DE RAP2-1 XX OS Arabidopsis thaliana XX BF 2585; XX P0 A C G T 01 216 345 123 215 c 02 266 114 272 247 d 03 98 389 186 226 y 04 46 810 17 26 C 05 810 2 78 9 A 06 4 890 3 2 C 07 5 890 0 4 C 08 5 2 890 2 G 09 738 106 10 45 A 10 2 892 1 4 C 11 739 67 44 49 A 12 229 237 71 362 h 13 214 221 121 343 t 14 254 137 239 269 d 15 236 265 154 244 h XX BS 64990; BS 65144; BS 65145; BS 65146; BS 65147; BS 65148; BS 65149; BS 65150; BS 65151; BS 65152; BS 65153; BS 63248; BS 65154; BS 63249; BS 65155; BS 65156; BS 65157; BS 65158; BS 65159; BS 65160; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2-1:MA1679.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RVE7/MA1680.1/JASPAR XX ID RVE7:MA1680.1:JASPAR XX NA RVE7 XX DE RVE7 XX OS Arabidopsis thaliana XX BF 11447; XX P0 A C G T 01 658 423 318 488 w 02 857 277 397 356 a 03 1074 92 118 603 w 04 1822 11 15 39 A 05 1850 12 11 14 A 06 1856 5 10 16 A 07 26 5 11 1845 T 08 1874 4 2 7 A 09 4 3 2 1878 T 10 10 1863 3 11 C 11 113 109 18 1647 T 12 496 252 189 950 w 13 843 327 317 400 a 14 690 334 272 591 w XX BS 65161; BS 65162; BS 65163; BS 65164; BS 65165; BS 65166; BS 65167; BS 65168; BS 65169; BS 65170; BS 65171; BS 65172; BS 65173; BS 65174; BS 65175; BS 65176; BS 65177; BS 65178; BS 65179; BS 65180; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RVE7:MA1680.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SRM1/MA1681.1/JASPAR XX ID SRM1:MA1681.1:JASPAR XX NA SRM1 XX DE SRM1 XX OS Arabidopsis thaliana XX BF 11465; XX P0 A C G T 01 1356 254 290 1250 w 02 1153 375 709 913 w 03 1274 358 443 1075 w 04 2050 135 631 334 a 05 11 4 3125 10 G 06 3062 44 19 25 A 07 20 10 13 3107 T 08 3017 21 25 87 A 09 3005 27 41 77 A 10 90 128 2774 158 G 11 913 246 1692 299 r 12 743 264 234 1909 t 13 958 357 390 1445 w 14 1245 392 543 970 w XX BS 65181; BS 65182; BS 65183; BS 65184; BS 65185; BS 65186; BS 65187; BS 65188; BS 65189; BS 65190; BS 65191; BS 65192; BS 65193; BS 65194; BS 65195; BS 65196; BS 65197; BS 65198; BS 65199; BS 65200; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SRM1:MA1681.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCX3/MA1682.1/JASPAR XX ID TCX3:MA1682.1:JASPAR XX NA TCX3 XX DE TCX3 XX OS Arabidopsis thaliana XX BF 10946; XX P0 A C G T 01 314 154 90 413 w 02 457 127 91 296 w 03 701 48 63 159 A 04 751 37 46 137 A 05 782 10 36 143 A 06 22 6 11 932 T 07 24 1 2 944 T 08 0 971 0 0 C 09 940 2 11 18 A 10 943 0 3 25 A 11 955 2 3 11 A 12 182 60 16 713 T 13 316 97 62 496 w 14 244 154 60 513 w XX BS 65201; BS 65202; BS 65203; BS 65204; BS 65205; BS 65206; BS 65207; BS 65208; BS 65209; BS 65210; BS 65211; BS 65212; BS 65213; BS 65214; BS 65215; BS 65216; BS 65217; BS 65218; BS 65219; BS 65220; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCX3:MA1682.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF10/MA1685.1/JASPAR XX ID ARF10:MA1685.1:JASPAR XX NA ARF10 XX DE ARF10 XX OS Zea mays XX BF 17960; XX P0 A C G T 01 6226 10279 1870 1383 m 02 5611 5964 2004 6179 h 03 14080 1960 1922 1796 A 04 8441 2941 7020 1356 r 05 5069 5484 3268 5937 h 06 1319 649 17180 610 G 07 264 167 19132 195 G 08 186 250 19192 130 G 09 13662 268 5695 133 R 10 388 375 18929 66 G 11 18959 144 605 50 A 12 113 19406 147 92 C 13 14594 443 4553 168 A 14 6191 8527 1711 3329 m 15 1672 6272 6594 5220 b XX BS 65234; BS 65235; BS 65236; BS 65237; BS 65238; BS 65239; BS 65240; BS 65241; BS 65242; BS 65243; BS 65244; BS 65245; BS 65246; BS 65247; BS 65248; BS 65249; BS 65250; BS 65251; BS 65252; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF10:MA1685.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF13/MA1686.1/JASPAR XX ID ARF13:MA1686.1:JASPAR XX NA ARF13 XX DE ARF13 XX OS Zea mays XX BF 17961; XX P0 A C G T 01 5788 794 652 1172 A 02 3446 543 4009 408 r 03 569 6725 463 649 C 04 576 145 7420 265 G 05 328 29 8001 48 G 06 55 55 8271 25 G 07 268 67 8022 49 G 08 118 86 8175 27 G 09 7344 111 943 8 A 10 36 8284 55 31 C 11 7953 33 393 27 A 12 749 4283 214 3160 y 13 532 518 6710 646 G 14 745 516 875 6270 T XX BS 65253; BS 65254; BS 65255; BS 65256; BS 65257; BS 65258; BS 65259; BS 65260; BS 65261; BS 65262; BS 65263; BS 65264; BS 65265; BS 65266; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF13:MA1686.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF14/MA1687.1/JASPAR XX ID ARF14:MA1687.1:JASPAR XX NA ARF14 XX DE ARF14 XX OS Zea mays XX BF 17962; XX P0 A C G T 01 862 8235 681 1307 C 02 2403 571 7563 548 G 03 498 2616 7532 439 g 04 417 2651 7664 353 G 05 702 2221 7827 335 G 06 350 187 10466 82 G 07 10113 158 747 67 A 08 63 10858 94 70 C 09 10769 60 195 61 A 10 245 3731 97 7012 y 11 233 95 10683 74 G 12 234 291 150 10410 T 13 233 10042 177 633 C 14 593 2808 6490 1194 s 15 995 2579 6910 601 g 16 719 2592 6957 817 g XX BS 65267; BS 65268; BS 65269; BS 65270; BS 65271; BS 65272; BS 65273; BS 65274; BS 65275; BS 65276; BS 65277; BS 65278; BS 65279; BS 65280; BS 65281; BS 65282; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF14:MA1687.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF16/MA1688.1/JASPAR XX ID ARF16:MA1688.1:JASPAR XX NA ARF16 XX DE ARF16 XX OS Zea mays XX BF 17980; XX P0 A C G T 01 2470 1473 2135 1754 r 02 3249 1643 1614 1326 a 03 980 5307 965 580 c 04 5651 950 578 653 A 05 6555 574 511 192 A 06 302 374 6749 407 G 07 7230 142 359 101 A 08 357 6981 283 211 C 09 7198 220 214 200 A 10 6756 261 338 477 A 11 687 565 6061 519 G 12 5396 697 942 797 A 13 2328 2087 1543 1874 m 14 2681 1648 1781 1722 a XX BS 65283; BS 65284; BS 65285; BS 65286; BS 65287; BS 65288; BS 65289; BS 65290; BS 65291; BS 65292; BS 65293; BS 65294; BS 65295; BS 65296; BS 65297; BS 65298; BS 65299; BS 65300; BS 65301; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF16:MA1688.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF18/MA1689.1/JASPAR XX ID ARF18:MA1689.1:JASPAR XX NA ARF18 XX DE ARF18 XX OS Zea mays XX BF 17916; XX P0 A C G T 01 985 580 588 644 a 02 700 897 751 449 v 03 77 2334 50 336 C 04 346 2297 91 63 C 05 60 16 2698 23 G 06 2735 13 39 10 A 07 9 2746 25 17 C 08 2672 108 12 5 A 09 2292 154 209 142 A 10 2075 277 321 124 A 11 889 665 746 497 r 12 998 533 549 717 w 13 729 603 632 833 w XX BS 65302; BS 65303; BS 65304; BS 65305; BS 65306; BS 65307; BS 65308; BS 65309; BS 65310; BS 65311; BS 65312; BS 65313; BS 65314; BS 65315; BS 65316; BS 65317; BS 65318; BS 65319; BS 65320; BS 65321; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF18:MA1689.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF25/MA1690.1/JASPAR XX ID ARF25:MA1690.1:JASPAR XX NA ARF25 XX DE ARF25 XX OS Zea mays XX BF 17939; XX P0 A C G T 01 7526 7690 1231 2993 m 02 13488 1748 1955 2249 A 03 9458 2342 6525 1115 r 04 4788 8051 3997 2604 c 05 1286 638 16922 594 G 06 490 134 18723 93 G 07 179 121 19073 67 G 08 7031 261 11973 175 r 09 602 171 18527 140 G 10 18246 140 1021 33 A 11 119 19053 197 71 C 12 18584 96 704 56 A 13 9076 6075 978 3311 m 14 1349 2535 8454 7102 k 15 1956 2345 8006 7133 k XX BS 65322; BS 65323; BS 65324; BS 65325; BS 65326; BS 65327; BS 65328; BS 65329; BS 65330; BS 65331; BS 65332; BS 65333; BS 65334; BS 65335; BS 65336; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF25:MA1690.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF27/MA1691.1/JASPAR XX ID ARF27:MA1691.1:JASPAR XX NA ARF27 XX DE ARF27 XX OS Zea mays XX BF 17963; XX P0 A C G T 01 1524 2266 1789 1251 s 02 1928 2049 1322 1531 m 03 2684 860 1857 1429 r 04 700 671 4962 497 G 05 173 6134 279 244 C 06 5932 635 115 148 A 07 163 93 6412 162 G 08 6497 133 160 40 A 09 92 6539 89 110 C 10 6652 76 55 47 A 11 782 467 596 4985 T 12 1645 1498 2355 1332 g 13 1969 1600 1667 1594 a XX BS 65337; BS 65338; BS 65339; BS 65340; BS 65341; BS 65342; BS 65343; BS 65344; BS 65345; BS 65346; BS 65347; BS 65348; BS 65349; BS 65350; BS 65351; BS 65352; BS 65353; BS 65354; BS 65355; BS 65356; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF27:MA1691.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF29/MA1692.1/JASPAR XX ID ARF29:MA1692.1:JASPAR XX NA ARF29 XX DE ARF29 XX OS Zea mays XX BF 17964; XX P0 A C G T 01 1242 1455 1310 1234 c 02 1450 1357 1244 1190 m 03 1269 1239 1117 1616 t 04 1475 1102 1278 1386 w 05 468 468 3994 311 G 06 200 4649 147 245 C 07 576 4459 116 90 C 08 83 16 5091 51 G 09 5053 43 120 25 A 10 16 5154 36 35 C 11 4801 289 121 30 A 12 3983 329 602 327 A 13 1531 1370 1531 809 v 14 1598 1242 1396 1005 r 15 1622 1206 988 1425 w XX BS 65357; BS 65358; BS 65359; BS 65360; BS 65361; BS 65362; BS 65363; BS 65364; BS 65365; BS 65366; BS 65367; BS 65368; BS 65369; BS 65370; BS 65371; BS 65372; BS 65373; BS 65374; BS 65375; BS 65376; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF29:MA1692.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF34/MA1693.1/JASPAR XX ID ARF34:MA1693.1:JASPAR XX NA ARF34 XX DE ARF34 XX OS Zea mays XX BF 17917; XX P0 A C G T 01 4678 2573 3827 3172 r 02 3908 3118 3747 3477 r 03 388 13025 544 293 C 04 11877 1396 585 392 A 05 363 174 13571 142 G 06 13106 391 622 131 A 07 146 13756 233 115 C 08 13693 172 181 204 A 09 1458 607 10249 1936 G 10 1230 11608 825 587 C 11 5728 3751 2708 2063 m 12 4406 3332 3589 2923 r 13 3224 3521 4418 3087 g XX BS 65377; BS 65378; BS 65379; BS 65380; BS 65381; BS 65382; BS 65383; BS 65384; BS 65385; BS 65386; BS 65387; BS 65388; BS 65389; BS 65390; BS 65391; BS 65392; BS 65393; BS 65394; BS 65395; BS 65396; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF34:MA1693.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF4/MA1697.1/JASPAR XX ID ARF4:MA1697.1:JASPAR XX NA ARF4 XX DE ARF4 XX OS Zea mays XX BF 17958; XX P0 A C G T 01 2014 1950 1732 970 v 02 1712 2246 1795 913 v 03 5236 734 356 340 A 04 375 5738 334 219 C 05 335 143 6073 115 G 06 6453 57 112 44 A 07 35 6524 74 33 C 08 6158 155 271 82 A 09 5261 667 243 495 A 10 316 516 5584 250 G 11 1927 1481 1918 1340 r 12 1751 1750 1555 1610 m XX BS 65450; BS 65451; BS 65452; BS 65453; BS 65454; BS 65455; BS 65456; BS 65457; BS 65458; BS 65459; BS 65460; BS 65461; BS 65462; BS 65463; BS 65464; BS 65465; BS 65466; BS 65467; BS 65468; BS 65469; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF4:MA1697.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF7/MA1698.1/JASPAR XX ID ARF7:MA1698.1:JASPAR XX NA ARF7 XX DE ARF7 XX OS Zea mays XX BF 17959; XX P0 A C G T 01 1740 1003 752 570 a 02 775 1727 745 818 c 03 1321 502 463 1779 w 04 251 317 3325 172 G 05 113 3717 135 100 C 06 141 3801 64 59 C 07 83 120 3799 63 G 08 3801 46 176 42 A 09 18 3917 76 54 C 10 2657 173 1196 39 r 11 3150 457 229 229 A 12 419 529 2904 213 G 13 771 970 1756 568 g 14 798 1001 735 1531 t XX BS 65470; BS 65471; BS 65472; BS 65473; BS 65474; BS 65475; BS 65476; BS 65477; BS 65412; BS 65478; BS 65479; BS 65480; BS 65481; BS 65482; BS 65397; BS 65483; BS 65484; BS 65485; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF7:MA1698.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G14600/UN0079.1/JASPAR XX ID AT1G14600:UN0079.1:JASPAR XX NA AT1G14600 XX DE AT1G14600 XX OS Arabidopsis thaliana XX BF 18103; XX P0 A C G T 01 301 195 306 195 r 02 358 48 48 543 w 03 806 0 94 99 A 04 94 596 0 309 y 05 905 0 0 93 A 06 0 0 0 999 T 07 200 0 93 705 T 08 0 798 0 200 C 09 147 260 54 537 y 10 299 201 201 297 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G14600:UN0079.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHL3/UN0080.1/JASPAR XX ID PHL3:UN0080.1:JASPAR XX NA PHL3 XX DE PHL3 XX OS Arabidopsis thaliana XX BF 18130; XX P0 A C G T 01 389 161 203 245 a 02 587 81 101 229 a 03 48 37 518 395 k 04 929 2 60 7 A 05 37 0 0 962 T 06 91 45 139 724 T 07 0 988 0 11 C 08 48 364 298 289 b 09 212 310 223 254 y 10 216 267 190 326 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHL3:UN0080.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CEG01538.1/UN0275.1/JASPAR XX ID CEG01538.1:UN0275.1:JASPAR XX NA CEG01538.1 XX DE CEG01538.1 XX OS Ostreococcus tauri XX BF 17918; XX P0 A C G T 01 69 241 34 654 t 02 112 112 687 87 G 03 999 0 0 0 A 04 0 0 0 999 T 05 0 0 0 999 T 06 0 0 999 0 G 07 111 49 0 839 T 08 138 103 17 741 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CEG01538.1:UN0275.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PNRC2/UN0276.1/JASPAR XX ID PNRC2:UN0276.1:JASPAR XX NA PNRC2 XX DE PNRC2 XX OS Ostreococcus tauri XX BF 17969; XX P0 A C G T 01 725 182 91 0 A 02 873 0 0 125 A 03 686 0 0 312 W 04 312 686 0 0 M 05 0 998 0 0 C 06 0 935 0 62 C 07 62 0 0 935 T 08 997 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PNRC2:UN0276.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC016/UN0342.1/JASPAR XX ID ANAC016:UN0342.1:JASPAR XX NA ANAC016 XX DE ANAC016 XX OS Arabidopsis thaliana XX BF 17955; XX P0 A C G T 01 853 869 617 926 h 02 996 733 819 717 r 03 17 3090 33 125 C 04 3073 61 63 68 A 05 2869 279 33 84 A 06 24 21 3176 44 G 07 91 2392 72 710 C 08 2866 140 72 187 A 09 2960 68 48 189 A 10 777 800 707 981 t 11 932 779 611 943 w XX BS 67588; BS 67589; BS 67590; BS 67591; BS 67592; BS 67593; BS 67594; BS 67595; BS 67596; BS 67597; BS 67598; BS 67599; BS 67600; BS 67601; BS 67602; BS 67603; BS 67604; BS 67605; BS 67606; BS 67607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC016:UN0342.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC020/UN0343.1/JASPAR XX ID ANAC020:UN0343.1:JASPAR XX NA ANAC020 XX DE ANAC020 XX OS Arabidopsis thaliana XX BF 12232; XX P0 A C G T 01 263 143 214 302 w 02 378 151 139 254 w 03 149 77 550 146 g 04 161 84 541 136 g 05 45 7 2 868 T 06 147 11 78 686 T 07 198 62 463 199 g 08 27 885 1 9 C 09 2 2 448 470 k 10 1 1 1 919 T 11 70 66 769 17 G 12 105 94 49 674 T 13 228 112 384 198 g 14 255 210 201 256 w 15 208 379 147 188 c 16 578 61 145 138 a 17 35 734 100 53 C 18 921 0 1 0 A 19 849 69 3 1 A 20 2 1 910 9 G 21 200 133 89 500 t 22 585 105 14 218 a 23 767 6 13 136 A 24 207 312 143 260 y XX BS 67608; BS 67609; BS 67610; BS 67611; BS 67612; BS 67613; BS 67614; BS 67615; BS 67616; BS 67617; BS 67618; BS 67619; BS 67620; BS 67621; BS 67622; BS 67623; BS 67624; BS 67625; BS 67626; BS 67627; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC020:UN0343.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC028/UN0344.1/JASPAR XX ID ANAC028:UN0344.1:JASPAR XX NA ANAC028 XX DE ANAC028 XX OS Arabidopsis thaliana XX BF 12233; XX P0 A C G T 01 347 371 214 370 h 02 481 212 311 298 a 03 31 1188 34 49 C 04 1279 4 7 12 A 05 1202 71 10 19 A 06 13 2 1281 6 G 07 97 90 48 1067 T 08 1103 64 7 128 A 09 1266 9 3 24 A 10 198 301 138 665 t 11 195 824 117 166 c 12 365 189 230 518 w 13 420 303 197 382 w XX BS 67628; BS 67629; BS 67630; BS 67631; BS 67632; BS 67633; BS 67634; BS 67635; BS 67636; BS 67637; BS 67638; BS 67639; BS 67640; BS 67641; BS 67642; BS 67643; BS 67644; BS 67645; BS 67646; BS 67647; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC028:UN0344.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC038/UN0345.1/JASPAR XX ID ANAC038:UN0345.1:JASPAR XX NA ANAC038 XX DE ANAC038 XX OS Arabidopsis thaliana XX BF 12235; XX P0 A C G T 01 195 72 51 112 w 02 89 53 199 89 g 03 86 46 222 76 g 04 30 2 5 393 T 05 98 9 51 272 t 06 153 21 165 91 r 07 6 423 0 1 C 08 0 2 255 173 k 09 2 0 0 428 T 10 35 16 378 1 G 11 42 44 10 334 T 12 176 57 103 94 a 13 117 102 103 108 w 14 96 161 70 103 c 15 294 17 58 61 A 16 6 337 40 47 C 17 420 2 2 6 A 18 358 65 5 2 A 19 1 1 422 6 G 20 79 51 29 271 t 21 177 51 7 195 w 22 384 4 2 40 A 23 102 148 48 132 y 24 81 182 70 97 c XX BS 67648; BS 67649; BS 67650; BS 67651; BS 67652; BS 67653; BS 67654; BS 67655; BS 67656; BS 67657; BS 67658; BS 67659; BS 67660; BS 64895; BS 64896; BS 64898; BS 67661; BS 67662; BS 67663; BS 67664; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC038:UN0345.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC057/UN0346.1/JASPAR XX ID ANAC057:UN0346.1:JASPAR XX NA ANAC057 XX DE ANAC057 XX OS Arabidopsis thaliana XX BF 12241; XX P0 A C G T 01 781 692 453 826 h 02 1038 495 656 563 a 03 0 2727 0 25 C 04 2674 6 22 50 A 05 2614 105 7 26 A 06 0 2 2711 39 G 07 2048 96 43 565 A 08 2515 36 15 186 A 09 2679 14 9 50 A 10 538 993 450 771 y 11 700 946 478 628 m XX BS 67665; BS 67666; BS 67605; BS 67606; BS 67590; BS 67591; BS 67667; BS 67593; BS 67594; BS 67597; BS 67668; BS 67669; BS 67670; BS 67671; BS 67599; BS 67672; BS 67673; BS 67602; BS 67674; BS 67604; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC057:UN0346.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC075/UN0347.1/JASPAR XX ID ANAC075:UN0347.1:JASPAR XX NA ANAC075 XX DE ANAC075 XX OS Arabidopsis thaliana XX BF 12245; XX P0 A C G T 01 249 151 168 225 w 02 297 148 162 186 a 03 404 80 174 135 a 04 113 41 585 54 G 05 455 30 30 278 w 06 591 12 73 117 A 07 163 40 476 114 g 08 17 766 2 8 C 09 1 3 113 676 T 10 0 0 1 792 T 11 71 164 543 15 G 12 177 74 26 516 t 13 238 145 185 225 w 14 163 230 241 159 s 15 237 176 139 241 w 16 510 23 83 177 a 17 13 516 188 76 c 18 788 1 3 1 A 19 677 112 0 4 A 20 8 1 770 14 G 21 110 459 65 159 c 22 142 83 19 549 T 23 412 52 68 261 w 24 147 339 85 222 y XX BS 67675; BS 67612; BS 67676; BS 67677; BS 67678; BS 67679; BS 67680; BS 67681; BS 67682; BS 67683; BS 67684; BS 67685; BS 67686; BS 67621; BS 67622; BS 67687; BS 67688; BS 67689; BS 67690; BS 67611; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC075:UN0347.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC076/UN0348.1/JASPAR XX ID ANAC076:UN0348.1:JASPAR XX NA ANAC076 XX DE ANAC076 XX OS Arabidopsis thaliana XX BF 17753; XX P0 A C G T 01 914 802 497 1034 w 02 1056 615 667 909 w 03 408 1879 539 421 c 04 3171 22 20 34 A 05 2963 216 16 52 A 06 7 18 3193 29 G 07 16 3023 23 185 C 08 2965 81 55 146 A 09 3088 19 17 123 A 10 775 931 615 926 y 11 871 1018 682 676 m 12 960 566 616 1105 w XX BS 65117; BS 65113; BS 67691; BS 67692; BS 67693; BS 65116; BS 65118; BS 67694; BS 67695; BS 67696; BS 67697; BS 67698; BS 67699; BS 67700; BS 67701; BS 65122; BS 67702; BS 67703; BS 65107; BS 65112; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC076:UN0348.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC096/UN0349.1/JASPAR XX ID ANAC096:UN0349.1:JASPAR XX NA ANAC096 XX DE ANAC096 XX OS Arabidopsis thaliana XX BF 12248; XX P0 A C G T 01 513 233 170 328 w 02 321 134 526 263 r 03 216 96 748 184 g 04 26 5 2 1211 T 05 153 2 55 1034 T 06 682 115 192 255 a 07 7 1234 0 3 C 08 0 0 75 1169 T 09 0 3 1 1240 T 10 95 176 890 83 G 11 265 206 126 647 t 12 319 192 445 288 r 13 339 278 290 337 w 14 285 449 171 339 y 15 653 111 212 268 a 16 77 873 190 104 C 17 1242 0 1 1 A 18 1173 70 0 1 A 19 2 0 1237 5 G 20 226 191 131 696 t 21 1030 58 4 152 A 22 1206 3 5 30 A 23 280 471 157 336 y 24 243 516 179 306 c XX BS 67704; BS 64889; BS 64890; BS 67705; BS 67706; BS 64893; BS 64894; BS 64895; BS 64896; BS 64898; BS 67661; BS 67707; BS 67708; BS 67709; BS 67710; BS 67711; BS 64904; BS 64905; BS 67648; BS 67659; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC096:UN0349.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC103/UN0350.1/JASPAR XX ID ANAC103:UN0350.1:JASPAR XX NA ANAC103 XX DE ANAC103 XX OS Arabidopsis thaliana XX BF 17763; XX P0 A C G T 01 545 286 205 383 w 02 397 217 457 348 r 03 310 183 689 237 g 04 298 62 56 1003 T 05 965 28 165 261 A 06 1006 104 170 139 A 07 12 1400 0 7 C 08 3 5 103 1308 T 09 1 2 1 1415 T 10 49 114 1195 61 G 11 226 193 217 783 t 12 257 170 294 698 t 13 345 369 382 323 s 14 661 271 156 331 a 15 343 228 613 235 g 16 64 1205 91 59 C 17 1412 2 3 2 A 18 1294 113 7 5 A 19 5 0 1395 19 G 20 134 174 104 1007 T 21 264 151 29 975 T 22 1061 65 53 240 A 23 307 450 241 421 y 24 326 444 295 354 c XX BS 67710; BS 67712; BS 67713; BS 67714; BS 67715; BS 67716; BS 67717; BS 67718; BS 67719; BS 67720; BS 67721; BS 67711; BS 67722; BS 64899; BS 64900; BS 67723; BS 67724; BS 67725; BS 67726; BS 67727; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC103:UN0350.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARID6/UN0351.1/JASPAR XX ID ARID6:UN0351.1:JASPAR XX NA ARID6 XX DE ARID6 XX OS Arabidopsis thaliana XX BF 17707; XX P0 A C G T 01 297 71 78 292 w 02 328 58 69 283 w 03 246 39 57 396 w 04 199 47 43 449 w 05 49 10 14 665 T 06 55 19 24 640 T 07 686 1 20 31 A 08 704 5 9 20 A 09 13 5 4 716 T 10 21 14 4 699 T 11 18 0 701 19 G 12 642 10 27 59 A 13 587 23 32 96 A 14 288 60 56 334 w 15 272 72 57 337 w XX BS 67728; BS 67729; BS 67730; BS 67731; BS 67732; BS 67733; BS 67734; BS 67735; BS 67736; BS 67737; BS 67738; BS 67739; BS 67740; BS 67741; BS 67742; BS 67743; BS 67744; BS 67745; BS 67746; BS 67747; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARID6:UN0351.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ASIL2/UN0352.1/JASPAR XX ID ASIL2:UN0352.1:JASPAR XX NA ASIL2 XX DE ASIL2 XX OS Arabidopsis thaliana XX BF 12352; XX P0 A C G T 01 480 168 281 470 w 02 297 210 210 682 t 03 33 1089 33 244 C 04 74 10 147 1168 T 05 12 1367 14 6 C 06 6 1391 0 2 C 07 14 2 1382 1 G 08 63 61 1244 31 G 09 25 1233 7 134 C 10 83 59 1217 40 G 11 853 144 228 174 a 12 393 419 252 335 m 13 393 188 449 369 d XX BS 67748; BS 67749; BS 67750; BS 67751; BS 67752; BS 67753; BS 67754; BS 67755; BS 67756; BS 67757; BS 67758; BS 67759; BS 67760; BS 67761; BS 67762; BS 67763; BS 67764; BS 67765; BS 67766; BS 67767; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ASIL2:UN0352.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G11100/UN0353.1/JASPAR XX ID AT3G11100:UN0353.1:JASPAR XX NA AT3G11100 XX DE AT3G11100 XX OS Arabidopsis thaliana XX BF 18156; XX P0 A C G T 01 479 1021 300 696 y 02 615 330 1002 549 g 03 1432 652 254 158 m 04 16 2413 6 61 C 05 24 13 2445 14 G 06 57 26 2394 19 G 07 102 2298 12 84 C 08 73 55 2311 57 G 09 2127 58 198 113 A 10 355 653 886 602 s 11 760 289 875 572 r 12 810 396 698 592 r XX BS 67768; BS 67769; BS 67770; BS 67771; BS 67772; BS 67773; BS 67774; BS 67775; BS 67776; BS 67777; BS 67778; BS 67779; BS 67780; BS 67781; BS 67782; BS 67783; BS 67784; BS 67785; BS 67786; BS 67787; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G11100:UN0353.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G42860/UN0354.1/JASPAR XX ID AT3G42860:UN0354.1:JASPAR XX NA AT3G42860 XX DE AT3G42860 XX OS Arabidopsis thaliana XX BF 17738; XX P0 A C G T 01 626 198 199 264 a 02 804 100 170 213 a 03 1072 26 166 23 A 04 9 6 1268 4 G 05 0 2 2 1283 T 06 10 1271 1 5 C 07 1277 5 2 3 A 08 1279 1 3 4 A 09 66 1136 6 79 C 10 122 114 871 180 g 11 339 305 301 342 w 12 334 357 165 431 h XX BS 67788; BS 67789; BS 67790; BS 67791; BS 67792; BS 67793; BS 67794; BS 67795; BS 67796; BS 67797; BS 67798; BS 67799; BS 67800; BS 67801; BS 67802; BS 67803; BS 67804; BS 67805; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G42860:UN0354.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G49930/UN0355.1/JASPAR XX ID AT3G49930:UN0355.1:JASPAR XX NA AT3G49930 XX DE AT3G49930 XX OS Arabidopsis thaliana XX BF 12293; XX P0 A C G T 01 222 290 146 466 y 02 294 286 131 413 h 03 44 90 39 951 T 04 1068 10 17 29 A 05 35 1013 42 34 C 06 23 1078 11 12 C 07 40 5 30 1049 T 08 1077 7 14 26 A 09 887 139 19 79 A 10 234 362 74 454 y 11 325 205 119 475 w XX BS 67806; BS 67807; BS 67808; BS 67809; BS 67810; BS 67811; BS 67812; BS 67813; BS 67814; BS 67815; BS 67816; BS 67817; BS 67818; BS 67819; BS 67820; BS 67821; BS 67822; BS 67823; BS 67824; BS 67825; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G49930:UN0355.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G05550/UN0356.1/JASPAR XX ID AT5G05550:UN0356.1:JASPAR XX NA AT5G05550 XX DE AT5G05550 XX OS Arabidopsis thaliana XX BF 18184; XX P0 A C G T 01 845 280 463 710 w 02 482 390 327 1099 t 03 41 1863 43 351 C 04 160 13 328 1797 T 05 24 2244 15 15 C 06 7 2283 0 8 C 07 13 0 2281 4 G 08 105 119 2017 57 G 09 59 2038 10 191 C 10 128 68 2037 65 G 11 1363 208 428 299 a 12 597 641 377 683 h 13 707 289 796 506 r XX BS 67826; BS 67765; BS 67766; BS 67827; BS 67828; BS 67829; BS 67830; BS 67831; BS 67832; BS 67750; BS 67751; BS 67833; BS 67834; BS 67835; BS 67759; BS 67761; BS 67836; BS 67837; BS 67763; BS 67764; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G05550:UN0356.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G23930/UN0357.1/JASPAR XX ID AT5G23930:UN0357.1:JASPAR XX NA AT5G23930 XX DE AT5G23930 XX OS Arabidopsis thaliana XX BF 12309; XX P0 A C G T 01 228 1033 293 520 y 02 535 1323 91 125 m 03 0 0 2074 0 G 04 0 2074 0 0 C 05 0 2074 0 0 C 06 0 0 2074 0 G 07 0 2074 0 0 C 08 0 2074 0 0 C 09 600 43 1135 296 r 10 191 1036 249 598 y XX BS 67838; BS 67839; BS 67840; BS 67841; BS 67842; BS 67843; BS 67844; BS 67845; BS 67846; BS 67847; BS 67848; BS 67849; BS 67850; BS 67851; BS 67852; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G23930:UN0357.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATMYB13/UN0358.1/JASPAR XX ID ATMYB13:UN0358.1:JASPAR XX NA ATMYB13 XX DE ATMYB13 XX OS Arabidopsis thaliana XX BF 17717; XX P0 A C G T 01 348 300 168 332 h 02 324 265 214 345 w 03 349 320 157 322 h 04 215 472 147 314 y 05 140 581 70 357 y 06 60 914 36 138 C 07 1107 5 11 25 A 08 107 1022 8 11 C 09 10 1117 6 15 C 10 905 46 17 180 A 11 1106 11 22 9 A 12 90 1034 5 19 C 13 35 1016 16 81 C 14 728 191 95 134 a 15 390 360 106 292 h 16 375 313 153 307 h XX BS 67853; BS 67854; BS 67855; BS 67856; BS 67857; BS 67858; BS 67859; BS 67860; BS 67861; BS 67862; BS 67863; BS 67864; BS 67865; BS 67866; BS 67867; BS 67868; BS 67869; BS 67870; BS 67871; BS 67872; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATMYB13:UN0358.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BHLH28/UN0359.1/JASPAR XX ID BHLH28:UN0359.1:JASPAR XX NA BHLH28 XX DE BHLH28 XX OS Arabidopsis thaliana XX BF 12567; XX P0 A C G T 01 806 581 525 836 w 02 740 657 481 870 w 03 716 514 610 908 w 04 688 548 559 953 w 05 734 287 1141 586 r 06 394 51 291 2012 T 07 117 2536 12 83 C 08 22 2660 16 50 C 09 16 5 2716 11 G 10 10 4 9 2725 T 11 2714 12 12 10 A 12 8 2699 19 22 C 13 1731 261 509 247 a 14 1043 455 581 669 a 15 823 489 436 1000 w XX BS 67873; BS 67874; BS 67875; BS 67876; BS 67877; BS 67878; BS 67879; BS 67880; BS 67881; BS 67882; BS 67883; BS 67884; BS 67885; BS 67886; BS 67887; BS 67888; BS 67889; BS 67890; BS 67891; BS 67892; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BHLH28:UN0359.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDF5/UN0360.1/JASPAR XX ID CDF5:UN0360.1:JASPAR XX NA CDF5 XX DE CDF5 XX OS Arabidopsis thaliana XX BF 12270; XX P0 A C G T 01 1306 482 645 1388 w 02 826 900 926 1169 t 03 3821 0 0 0 A 04 3802 0 0 19 A 05 3820 0 0 1 A 06 3820 0 0 1 A 07 3821 0 0 0 A 08 0 0 3821 0 G 09 941 510 724 1646 t 10 1597 325 985 914 r XX BS 67893; BS 67894; BS 67895; BS 67896; BS 67897; BS 67898; BS 67899; BS 67900; BS 67901; BS 67902; BS 67903; BS 67904; BS 67905; BS 67906; BS 67907; BS 67908; BS 67909; BS 67910; BS 67911; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDF5:UN0360.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2FD/UN0361.1/JASPAR XX ID E2FD:UN0361.1:JASPAR XX NA E2FD XX DE E2FD XX OS Arabidopsis thaliana XX BF 3888; XX P0 A C G T 01 121 20 47 589 T 02 94 26 47 610 T 03 48 29 52 648 T 04 64 25 636 52 G 05 27 18 726 6 G 06 105 599 17 56 C 07 11 3 760 3 G 08 25 2 744 6 G 09 9 3 760 5 G 10 768 1 2 6 A 11 757 3 10 7 A 12 751 1 9 16 A 13 563 56 31 127 A 14 183 64 42 488 t 15 183 109 122 363 t 16 281 58 144 294 w XX BS 67912; BS 67913; BS 67914; BS 67915; BS 67916; BS 67917; BS 67918; BS 67919; BS 67920; BS 67921; BS 67922; BS 67923; BS 67924; BS 67925; BS 5858; BS 67926; BS 67927; BS 67928; BS 67929; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2FD:UN0361.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC EICBP-B/UN0362.1/JASPAR XX ID EICBP-B:UN0362.1:JASPAR XX NA EICBP-B XX DE EICBP-B XX OS Arabidopsis thaliana XX BF 17771; XX P0 A C G T 01 302 175 186 243 w 02 291 180 169 266 w 03 224 292 224 166 c 04 644 65 84 113 A 05 762 30 48 66 A 06 791 23 47 45 A 07 610 97 182 17 a 08 7 888 3 8 C 09 28 9 861 8 G 10 18 839 6 43 C 11 9 3 889 5 G 12 10 10 21 865 T 13 95 53 596 162 g 14 530 52 143 181 a 15 343 153 200 210 a 16 281 168 225 232 w XX BS 67930; BS 67931; BS 67932; BS 67933; BS 67934; BS 67935; BS 67936; BS 67937; BS 67938; BS 67939; BS 67940; BS 67941; BS 67942; BS 67943; BS 67944; BS 67945; BS 67946; BS 67947; BS 67948; BS 67949; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=EICBP-B:UN0362.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF003/UN0363.1/JASPAR XX ID ERF003:UN0363.1:JASPAR XX NA ERF003 XX DE ERF003 XX OS Arabidopsis thaliana XX BF 12402; XX P0 A C G T 01 375 1104 174 524 c 02 583 277 480 837 w 03 171 1383 224 399 c 04 67 1992 23 95 C 05 253 19 463 1442 t 06 20 2112 31 14 C 07 29 2127 4 17 C 08 253 9 1796 119 G 09 16 2086 52 23 C 10 1 2165 4 7 C 11 68 4 2055 50 G 12 191 1288 214 484 c 13 489 1095 166 427 c XX BS 67950; BS 67951; BS 67952; BS 67953; BS 67954; BS 67955; BS 67956; BS 67957; BS 67958; BS 67959; BS 67960; BS 67961; BS 67962; BS 67963; BS 67964; BS 67965; BS 67966; BS 67967; BS 67968; BS 67969; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF003:UN0363.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF011/UN0364.1/JASPAR XX ID ERF011:UN0364.1:JASPAR XX NA ERF011 XX DE ERF011 XX OS Arabidopsis thaliana XX BF 5585; XX P0 A C G T 01 732 765 349 600 m 02 811 393 524 718 w 03 412 807 326 901 y 04 139 2130 96 81 C 05 2305 7 98 36 A 06 13 2411 10 12 C 07 8 2427 5 6 C 08 23 12 2401 10 G 09 2115 74 47 210 A 10 10 2394 14 28 C 11 841 1106 275 224 m 12 1197 437 268 544 a 13 733 629 367 717 h 14 749 508 526 663 w XX BS 67970; BS 67971; BS 67972; BS 67973; BS 67974; BS 67975; BS 67976; BS 67977; BS 67978; BS 67979; BS 67980; BS 67981; BS 67982; BS 67983; BS 67984; BS 67985; BS 67986; BS 67987; BS 67988; BS 67989; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF011:UN0364.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT-2/UN0365.1/JASPAR XX ID GT-2:UN0365.1:JASPAR XX NA GT-2 XX DE GT-2 XX OS Arabidopsis thaliana XX BF 12415; XX P0 A C G T 01 1752 404 784 905 a 02 1190 854 587 1214 w 03 126 22 3652 45 G 04 148 18 3664 15 G 05 49 24 19 3753 T 06 3227 67 202 349 A 07 3723 25 49 48 A 08 3530 63 96 156 A 09 3348 52 47 398 A 10 3027 173 209 436 A 11 1494 467 543 1341 w 12 1449 437 680 1279 w XX BS 67990; BS 67991; BS 67992; BS 67993; BS 67994; BS 67995; BS 64917; BS 67996; BS 67997; BS 64919; BS 64920; BS 67998; BS 67999; BS 64906; BS 68000; BS 68001; BS 68002; BS 68003; BS 68004; BS 68005; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT-2:UN0365.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB107/UN0366.1/JASPAR XX ID MYB107:UN0366.1:JASPAR XX NA MYB107 XX DE MYB107 XX OS Arabidopsis thaliana XX BF 12451; XX P0 A C G T 01 116 151 97 216 y 02 89 192 43 256 y 03 57 441 25 57 C 04 564 1 7 8 A 05 32 532 3 13 C 06 7 563 3 7 C 07 473 12 3 92 A 08 571 7 1 1 A 09 454 106 8 12 A 10 23 525 5 27 C 11 227 133 42 178 w 12 178 155 60 187 h 13 224 115 85 156 w XX BS 68006; BS 68007; BS 68008; BS 68009; BS 68010; BS 68011; BS 68012; BS 68013; BS 68014; BS 68015; BS 68016; BS 68017; BS 68018; BS 68019; BS 68020; BS 68021; BS 68022; BS 68023; BS 68024; BS 68025; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB107:UN0366.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB58/UN0367.1/JASPAR XX ID MYB58:UN0367.1:JASPAR XX NA MYB58 XX DE MYB58 XX OS Arabidopsis thaliana XX BF 17709; XX P0 A C G T 01 563 303 205 480 w 02 406 402 311 432 h 03 335 590 202 424 y 04 294 310 165 782 t 05 163 861 98 429 y 06 35 1368 14 134 C 07 1500 8 21 22 A 08 163 1361 12 15 C 09 9 1520 7 15 C 10 1374 21 23 133 A 11 1440 59 30 22 A 12 209 1291 11 40 C 13 91 1185 35 240 C 14 466 688 138 259 m 15 355 798 105 293 c 16 529 352 213 457 w 17 498 411 234 408 h XX BS 68026; BS 68027; BS 68028; BS 68029; BS 68030; BS 68031; BS 68032; BS 68033; BS 68034; BS 68035; BS 68036; BS 68037; BS 68038; BS 68039; BS 68040; BS 68041; BS 68042; BS 68043; BS 68044; BS 68045; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB58:UN0367.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB99/UN0368.1/JASPAR XX ID MYB99:UN0368.1:JASPAR XX NA MYB99 XX DE MYB99 XX OS Arabidopsis thaliana XX BF 12489; XX P0 A C G T 01 154 332 106 431 y 02 168 312 90 453 y 03 0 1023 0 0 C 04 987 1 26 9 A 05 0 1004 11 8 C 06 0 1022 1 0 C 07 1 0 12 1010 T 08 1020 3 0 0 A 09 535 372 32 84 m 10 140 471 35 377 y XX BS 68046; BS 68047; BS 68048; BS 68049; BS 68050; BS 68051; BS 68052; BS 68053; BS 68054; BS 68055; BS 68056; BS 68057; BS 68058; BS 68059; BS 68060; BS 68061; BS 68062; BS 68063; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB99:UN0368.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC004/UN0369.1/JASPAR XX ID NAC004:UN0369.1:JASPAR XX NA NAC004 XX DE NAC004 XX OS Arabidopsis thaliana XX BF 17708; XX P0 A C G T 01 163 121 162 166 d 02 177 89 88 258 w 03 129 29 25 429 T 04 130 43 370 69 g 05 3 600 5 4 C 06 2 0 4 606 T 07 3 0 4 605 T 08 347 110 139 16 a 09 48 93 42 429 T 10 166 120 132 194 w 11 174 118 151 169 w 12 184 83 226 119 r 13 463 39 59 51 A 14 19 129 330 134 g 15 604 3 3 2 A 16 601 2 3 6 A 17 5 1 603 3 G 18 29 68 50 465 T 19 83 28 20 481 T 20 140 62 58 352 t 21 131 303 86 92 c 22 156 98 68 290 w 23 163 105 128 216 w 24 181 118 129 184 w XX BS 68064; BS 68065; BS 68066; BS 68067; BS 68068; BS 68069; BS 68070; BS 68071; BS 68072; BS 68073; BS 68074; BS 68075; BS 68076; BS 68077; BS 68078; BS 68079; BS 68080; BS 68081; BS 68082; BS 68083; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC004:UN0369.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC007/UN0370.1/JASPAR XX ID NAC007:UN0370.1:JASPAR XX NA NAC007 XX DE NAC007 XX OS Arabidopsis thaliana XX BF 12536; XX P0 A C G T 01 613 525 325 710 w 02 721 368 473 611 w 03 285 1236 361 291 c 04 2117 13 19 24 A 05 1962 161 11 39 A 06 4 7 2144 18 G 07 3 2037 9 124 C 08 1974 60 40 99 A 09 2067 15 13 78 A 10 542 624 413 594 y 11 607 686 437 443 m XX BS 67665; BS 67668; BS 68084; BS 68085; BS 68086; BS 68087; BS 68088; BS 68089; BS 68090; BS 68091; BS 68092; BS 68093; BS 68094; BS 68095; BS 67602; BS 67605; BS 67606; BS 67607; BS 67592; BS 68096; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC007:UN0370.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC010/UN0371.1/JASPAR XX ID NAC010:UN0371.1:JASPAR XX NA NAC010 XX DE NAC010 XX OS Arabidopsis thaliana XX BF 12512; XX P0 A C G T 01 263 147 182 282 w 02 320 165 146 243 w 03 157 85 482 150 g 04 142 70 558 104 g 05 125 22 33 694 T 06 501 31 99 243 w 07 212 64 492 106 g 08 29 824 5 16 C 09 0 2 558 314 k 10 3 4 2 865 T 11 136 61 658 19 G 12 151 62 33 628 T 13 255 145 228 246 d 14 224 189 237 224 d 15 211 324 134 205 c 16 591 47 80 156 a 17 31 638 121 84 C 18 869 1 4 0 A 19 759 110 2 3 A 20 7 2 846 19 G 21 144 150 90 490 t 22 215 100 29 530 t 23 547 44 55 228 w 24 206 300 137 231 y XX BS 68097; BS 68098; BS 67615; BS 67616; BS 67617; BS 67618; BS 67620; BS 68099; BS 68100; BS 67677; BS 67678; BS 68101; BS 67679; BS 67621; BS 67622; BS 67689; BS 68102; BS 68103; BS 68104; BS 68105; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC010:UN0371.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC031/UN0372.1/JASPAR XX ID NAC031:UN0372.1:JASPAR XX NA NAC031 XX DE NAC031 XX OS Arabidopsis thaliana XX BF 12388; XX P0 A C G T 01 269 142 221 281 w 02 378 169 127 239 w 03 161 82 513 157 g 04 200 93 464 156 g 05 69 5 10 829 T 06 173 18 95 627 T 07 261 64 449 139 r 08 18 882 3 10 C 09 1 4 599 309 k 10 0 2 2 909 T 11 115 56 734 8 G 12 119 95 40 659 T 13 406 112 188 207 a 14 274 200 193 246 w 15 245 298 138 232 h 16 635 44 99 135 A 17 34 665 105 109 C 18 883 7 4 19 A 19 750 145 10 8 A 20 11 1 880 21 G 21 153 146 96 518 t 22 382 120 23 388 w 23 748 19 13 133 A 24 217 302 134 260 y XX BS 67608; BS 68106; BS 67681; BS 67682; BS 67683; BS 67684; BS 67686; BS 68107; BS 68108; BS 68109; BS 68110; BS 67619; BS 68111; BS 67625; BS 67626; BS 67613; BS 67614; BS 67615; BS 67616; BS 68112; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC031:UN0372.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC035/UN0373.1/JASPAR XX ID NAC035:UN0373.1:JASPAR XX NA NAC035 XX DE NAC035 XX OS Arabidopsis thaliana XX BF 17729; XX P0 A C G T 01 230 184 148 251 w 02 191 187 185 250 t 03 329 143 156 185 a 04 431 109 112 161 a 05 41 632 36 104 C 06 800 4 3 6 A 07 43 736 24 10 C 08 10 8 787 8 G 09 41 29 649 94 G 10 45 720 7 41 C 11 755 4 29 25 A 12 235 253 104 221 h 13 181 274 112 246 y 14 195 133 226 259 k XX BS 68113; BS 68114; BS 68115; BS 68116; BS 68117; BS 68118; BS 68119; BS 68120; BS 68121; BS 68122; BS 68123; BS 68124; BS 68125; BS 68126; BS 68127; BS 68128; BS 68129; BS 68130; BS 68131; BS 68132; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC035:UN0373.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC037/UN0374.1/JASPAR XX ID NAC037:UN0374.1:JASPAR XX NA NAC037 XX DE NAC037 XX OS Arabidopsis thaliana XX BF 17725; XX P0 A C G T 01 543 530 269 645 h 02 690 347 462 488 a 03 25 1779 32 151 C 04 1919 22 17 29 A 05 1709 217 14 47 A 06 6 24 1928 29 G 07 4 1727 32 224 C 08 1725 85 56 121 A 09 1827 16 24 120 A 10 450 601 330 606 y 11 496 643 438 410 c XX BS 67665; BS 67589; BS 67590; BS 67591; BS 67592; BS 67593; BS 67594; BS 68096; BS 68133; BS 68134; BS 68135; BS 68136; BS 68137; BS 67588; BS 68138; BS 68139; BS 67602; BS 67605; BS 67606; BS 67607; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC037:UN0374.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC045/UN0375.1/JASPAR XX ID NAC045:UN0375.1:JASPAR XX NA NAC045 XX DE NAC045 XX OS Arabidopsis thaliana XX BF 17741; XX P0 A C G T 01 446 353 263 342 m 02 531 193 304 376 w 03 112 367 814 111 s 04 1389 4 5 6 A 05 1327 52 16 9 A 06 23 11 1354 16 G 07 84 1158 41 121 C 08 1328 17 11 48 A 09 1352 3 10 39 A 10 148 917 142 197 c 11 287 695 172 250 c 12 364 238 263 539 w 13 444 330 250 380 w XX BS 68140; BS 67629; BS 68141; BS 67631; BS 68142; BS 68143; BS 68144; BS 67633; BS 68145; BS 68146; BS 68147; BS 67642; BS 68148; BS 68149; BS 68150; BS 67643; BS 67645; BS 67646; BS 68151; BS 68152; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC045:UN0375.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC053/UN0376.1/JASPAR XX ID NAC053:UN0376.1:JASPAR XX NA NAC053 XX DE NAC053 XX OS Arabidopsis thaliana XX BF 12240; XX P0 A C G T 01 1157 1073 639 1093 h 02 1383 799 960 820 a 03 2 3931 2 27 C 04 3873 8 38 43 A 05 3762 161 8 31 A 06 1 2 3927 32 G 07 3241 134 50 537 A 08 3640 56 17 249 A 09 3814 31 21 96 A 10 819 1483 640 1020 y 11 1125 1249 687 901 m 12 1168 634 812 1348 w XX BS 65121; BS 65113; BS 65114; BS 65115; BS 65116; BS 65118; BS 68153; BS 67694; BS 67695; BS 67696; BS 68154; BS 65122; BS 68155; BS 65123; BS 65124; BS 65107; BS 65108; BS 65109; BS 65111; BS 65112; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC053:UN0376.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC101/UN0377.1/JASPAR XX ID NAC101:UN0377.1:JASPAR XX NA NAC101 XX DE NAC101 XX OS Arabidopsis thaliana XX BF 12537; XX P0 A C G T 01 908 833 506 1115 w 02 1079 626 684 973 w 03 368 2059 479 456 c 04 3269 26 28 39 A 05 3029 251 16 66 A 06 9 17 3299 37 G 07 4 3117 23 218 C 08 3064 92 62 144 A 09 3143 30 27 162 A 10 843 933 621 965 h 11 937 1002 708 715 m XX BS 67665; BS 67606; BS 67607; BS 68156; BS 67589; BS 67590; BS 67591; BS 67592; BS 67593; BS 67594; BS 68096; BS 68136; BS 67597; BS 68093; BS 68157; BS 67599; BS 67601; BS 68095; BS 67602; BS 67605; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC101:UN0377.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC68/UN0378.1/JASPAR XX ID NAC68:UN0378.1:JASPAR XX NA NAC68 XX DE NAC68 XX OS Arabidopsis thaliana XX BF 17755; XX P0 A C G T 01 320 177 156 321 w 02 320 149 232 273 w 03 213 164 389 208 g 04 154 67 53 700 T 05 206 31 67 670 T 06 772 74 101 27 A 07 8 962 1 3 C 08 5 4 29 936 T 09 0 2 2 970 T 10 552 129 248 45 r 11 177 163 351 283 k 12 256 207 215 296 w 13 265 228 212 269 w 14 234 418 131 191 c 15 719 87 100 68 A 16 53 681 100 140 C 17 971 1 2 0 A 18 927 38 7 2 A 19 8 3 953 10 G 20 20 97 70 787 T 21 218 92 35 629 t 22 661 55 81 177 a 23 292 230 159 293 w 24 274 233 201 266 w XX BS 68158; BS 68159; BS 68160; BS 68161; BS 67727; BS 67712; BS 68162; BS 68163; BS 67717; BS 67718; BS 67662; BS 68164; BS 67663; BS 67710; BS 67711; BS 64899; BS 64900; BS 68165; BS 68166; BS 68167; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC68:UN0378.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC S1FA3/UN0379.1/JASPAR XX ID S1FA3:UN0379.1:JASPAR XX NA S1FA3 XX DE S1FA3 XX OS Arabidopsis thaliana XX BF 12285; XX P0 A C G T 01 410 371 703 496 k 02 476 573 418 513 y 03 97 81 34 1768 T 04 39 9 5 1927 T 05 17 1915 23 25 C 06 58 1078 118 726 y 07 1842 16 102 20 A 08 38 30 1892 20 G 09 1943 4 15 18 A 10 1800 19 69 92 A 11 513 379 627 461 r 12 462 759 365 394 c XX BS 68168; BS 68169; BS 68170; BS 68171; BS 68172; BS 68173; BS 68174; BS 68175; BS 68176; BS 68177; BS 68178; BS 68179; BS 68180; BS 68181; BS 68182; BS 68183; BS 68184; BS 68185; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=S1FA3:UN0379.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SMB/UN0380.1/JASPAR XX ID SMB:UN0380.1:JASPAR XX NA SMB XX DE SMB XX OS Arabidopsis thaliana XX BF 12510; XX P0 A C G T 01 1022 851 488 1241 w 02 1139 616 758 1089 w 03 418 2165 553 466 c 04 3480 45 35 42 A 05 3246 251 25 80 A 06 6 21 3530 45 G 07 8 3329 33 232 C 08 3245 115 64 178 A 09 3387 33 29 153 A 10 869 1004 716 1013 y 11 998 1078 740 786 m XX BS 67665; BS 67606; BS 67607; BS 68186; BS 68156; BS 67589; BS 67590; BS 67592; BS 67593; BS 67594; BS 68096; BS 68136; BS 68187; BS 68093; BS 68157; BS 67599; BS 67601; BS 68095; BS 67602; BS 67605; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SMB:UN0380.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAT6/UN0381.1/JASPAR XX ID ZAT6:UN0381.1:JASPAR XX NA ZAT6 XX DE ZAT6 XX OS Arabidopsis thaliana XX BF 8908; XX P0 A C G T 01 2817 1418 1391 2958 w 02 2604 1840 1459 2681 w 03 7234 393 310 647 A 04 7675 170 164 575 A 05 210 82 45 8247 T 06 342 40 7885 317 G 07 8264 56 82 182 A 08 290 37 173 8084 T 09 214 77 213 8080 T 10 1185 410 5912 1077 G 11 3267 1175 1824 2318 w 12 2603 1165 1611 3205 w XX BS 68188; BS 68189; BS 68190; BS 68191; BS 68192; BS 68193; BS 68194; BS 68195; BS 68196; BS 68197; BS 68198; BS 68199; BS 68200; BS 68201; BS 68202; BS 68203; BS 68204; BS 68205; BS 68206; BS 68207; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAT6:UN0381.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC105/UN0382.1/JASPAR XX ID NAC105:UN0382.1:JASPAR XX NA NAC105 XX DE NAC105 XX OS Arabidopsis thaliana XX BF 12535; XX P0 A C G T 01 333 313 166 389 h 02 389 209 257 346 w 03 128 680 214 179 c 04 1178 10 5 8 A 05 1122 69 3 7 A 06 9 12 1176 4 G 07 73 990 37 101 C 08 1136 20 14 31 A 09 1172 4 2 23 A 10 107 825 87 182 C 11 239 699 108 155 c 12 331 180 205 485 w 13 390 297 186 328 w XX BS 68208; BS 68145; BS 68147; BS 67637; BS 68209; BS 68210; BS 68211; BS 68212; BS 68213; BS 68214; BS 68215; BS 67628; BS 68216; BS 67643; BS 67645; BS 67646; BS 68217; BS 68151; BS 68218; BS 67633; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC105:UN0382.1:JASPAR XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ETHYLENE/1gcc_A/3D-footprint XX ID ETHYLENE:1gcc_A:3D-footprint XX NA ETHYLENE XX DE SOLUTION NMR STRUCTURE OF THE COMPLEX OF GCC-BOX BINDING DOMAIN OF ATERF1 AND GCC-BOX DNA, MINIMIZED AVERAGE STRUCTURE XX BF 10211; XX P0 A C G T 01 8 8 8 72 T 02 0 0 96 0 G 03 8 8 72 8 G 04 0 96 0 0 C 05 0 0 96 0 G 06 0 0 96 0 G 07 0 96 0 0 C 08 8 0 8 80 T 09 72 8 8 8 A XX BS 34906; BS 34907; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ETHYLENE:1gcc_A:3D-footprint XX RN [1]; RX PUBMED: 9736626 RL Allen M.D, Yamasaki K, Ohme-Takagi M, Tateno M, Suzuki M. A novel mode of DNA recognition by a beta-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA. The EMBO journal 17:5484-96 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qn3_B/3D-footprint XX ID TRANSCRIPTION:1qn3_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the C(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9320; XX P0 A C G T 01 0 0 0 96 T 02 96 0 0 0 A 03 0 0 0 96 T 04 96 0 0 0 A 05 96 0 0 0 A 06 54 16 13 13 a 07 0 96 0 0 C 08 13 16 54 13 g XX BS 26543; BS 26544; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qn3_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qn4_B/3D-footprint XX ID TRANSCRIPTION:1qn4_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the T(-24) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9320; XX P0 A C G T 01 54 16 13 13 a 02 0 0 0 96 T 03 16 13 13 54 t 04 0 0 0 96 T 05 0 0 0 96 T 06 96 0 0 0 A 07 0 0 0 96 T 08 96 0 0 0 A XX BS 26545; BS 26546; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qn4_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qn5_B/3D-footprint XX ID TRANSCRIPTION:1qn5_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the G(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9321; XX P0 A C G T 01 14 52 16 14 c 02 0 0 0 96 T 03 9 67 11 9 C 04 2 2 4 88 T 05 0 0 0 96 T 06 67 9 9 11 A 07 0 0 0 96 T 08 85 3 3 5 A XX BS 26547; BS 26548; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qn5_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qn6_B/3D-footprint XX ID TRANSCRIPTION:1qn6_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the T(-26) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9320; XX P0 A C G T 01 0 0 0 96 T 02 96 0 0 0 A 03 0 0 0 96 T 04 96 0 0 0 A 05 96 0 0 0 A 06 13 13 16 54 t 07 96 0 0 0 A 08 13 13 54 16 g XX BS 26549; BS 26550; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qn6_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qn7_B/3D-footprint XX ID TRANSCRIPTION:1qn7_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the T(-27) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9321; XX P0 A C G T 01 12 64 10 10 c 02 0 0 0 96 T 03 12 10 10 64 t 04 96 0 0 0 A 05 0 0 0 96 T 06 85 1 10 0 A 07 0 0 0 96 T 08 86 10 0 0 A XX BS 26551; BS 26552; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qn7_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qn8_B/3D-footprint XX ID TRANSCRIPTION:1qn8_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the T(-28) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9320; XX P0 A C G T 01 9 67 9 11 C 02 0 0 0 96 T 03 11 9 9 67 T 04 0 0 0 96 T 05 96 0 0 0 A 06 67 11 9 9 A 07 0 0 0 96 T 08 96 0 0 0 A XX BS 26553; BS 26554; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qn8_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qn9_B/3D-footprint XX ID TRANSCRIPTION:1qn9_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the C(-29) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9321; XX P0 A C G T 01 11 8 8 69 T 02 96 0 0 0 A 03 0 96 0 0 C 04 96 0 0 0 A 05 96 0 0 0 A 06 63 17 8 8 a 07 96 0 0 0 A 08 11 8 69 8 G XX BS 26555; BS 26556; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qn9_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qna_B/3D-footprint XX ID TRANSCRIPTION:1qna_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the T(-30) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9321; XX P0 A C G T 01 10 64 10 12 c 02 0 0 0 96 T 03 10 12 10 64 t 04 0 0 0 96 T 05 0 0 0 96 T 06 85 0 1 10 A 07 96 0 0 0 A 08 85 0 10 1 A XX BS 34932; BS 34933; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qna_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qnb_B/3D-footprint XX ID TRANSCRIPTION:1qnb_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the T(-25) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9320; XX P0 A C G T 01 96 0 0 0 A 02 16 16 16 48 t 03 0 0 0 96 T 04 0 0 0 96 T 05 80 0 16 0 A 06 0 0 0 96 T 07 80 0 16 0 A XX BS 26557; BS 26558; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qnb_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qnc_B/3D-footprint XX ID TRANSCRIPTION:1qnc_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the A(-31) Adenovirus major late promoter TATA box variant bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. XX BF 9320; XX P0 A C G T 01 2 54 27 13 s 02 0 0 0 96 T 03 13 13 27 43 k 04 0 0 0 96 T 05 0 0 0 96 T 06 96 0 0 0 A 07 0 0 0 96 T 08 0 0 0 96 T XX BS 26559; BS 26560; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qnc_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TRANSCRIPTION/1qne_B/3D-footprint XX ID TRANSCRIPTION:1qne_B:3D-footprint XX NA TRANSCRIPTION XX DE Crystal structure of the Adenovirus major late promoter TATA box bound to wild-type TBP (Arabidopsis thaliana TBP isoform 2). XX BF 9322; XX P0 A C G T 01 13 57 13 13 c 02 0 0 0 96 T 03 16 13 13 54 t 04 0 0 0 96 T 05 0 0 0 96 T 06 96 0 0 0 A 07 0 0 0 96 T 08 96 0 0 0 A XX BS 26561; BS 26562; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TRANSCRIPTION:1qne_B:3D-footprint XX RN [1]; RX PUBMED: 10617571 RL Patikoglou G.A, Kim J.L, Sun L, Yang S.H, Kodadek T, Burley S.K. TATA element recognition by the TATA box-binding protein has been conserved throughout evolution. Genes & development 13:3217-30 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TATA/1vto_B/3D-footprint XX ID TATA:1vto_B:3D-footprint XX NA TATA XX DE 1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG XX BF 9322; XX P0 A C G T 01 0 0 0 96 T 02 96 0 0 0 A 03 0 0 0 96 T 04 96 0 0 0 A 05 96 0 0 0 A 06 54 16 13 13 a 07 96 0 0 0 A 08 13 13 57 13 g XX BS 26561; BS 26562; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TATA:1vto_B:3D-footprint XX RN [1]; RX PUBMED: 7634103 RL Kim J.L, Burley S.K. 1.9 A resolution refined structure of TBP recognizing the minor groove of TATAAAAG. Nature structural biology 1:638-53 (1994). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Probable/2lex_A/3D-footprint XX ID Probable:2lex_A:3D-footprint XX NA Probable XX DE Complex of the C-terminal WRKY domain of AtWRKY4 and a W-box DNA XX BF 10249; XX P0 A C G T 01 7 7 9 73 T 02 24 24 24 24 n 03 7 9 7 73 T 04 24 24 24 24 n 05 73 7 7 9 A 06 9 73 7 7 C XX BS 34984; BS 34985; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Probable:2lex_A:3D-footprint XX RN [1]; RX PUBMED: 22219184 RL Yamasaki K, Kigawa T, Watanabe S, Inoue M, Yamasaki T, Seki M, Shinozaki K, Yokoyama S. Structural basis for sequence-specific DNA recognition by an Arabidopsis WRKY transcription factor. The Journal of biological chemistry 287:7683-91 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PROTEIN/2vy1_A/3D-footprint XX ID PROTEIN:2vy1_A:3D-footprint XX NA PROTEIN XX DE Structure of LEAFY transcription factor from Arabidopsis thaliana in complex with DNA from AP1 promoter XX BF 9458; XX P0 A C G T 01 9 11 9 67 T 02 0 0 96 0 G 03 0 0 96 0 G 04 0 0 0 96 T 05 24 24 24 24 n 06 24 24 24 24 n 07 24 24 24 24 n 08 11 9 9 67 T 09 67 11 9 9 A XX BS 34997; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PROTEIN:2vy1_A:3D-footprint XX RN [1]; RX PUBMED: 18784751 RL Hamès C, Ptchelkine D, Grimm C, Thevenon E, Moyroud E, Gérard F, Martiel J.L, Benlloch R, Parcy F, Müller C.W. Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins. The EMBO journal 27:2628-37 (2008). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PROTEIN/2vy2_A/3D-footprint XX ID PROTEIN:2vy2_A:3D-footprint XX NA PROTEIN XX DE Structure of LEAFY transcription factor from Arabidopsis thaliana in complex with DNA from AG-I promoter XX BF 9458; XX P0 A C G T 01 13 13 13 57 t 02 0 0 96 0 G 03 0 0 96 0 G 04 13 13 16 54 t 05 24 24 24 24 n 06 24 24 24 24 n 07 24 24 24 24 n 08 24 24 24 24 n 09 96 0 0 0 A XX BS 26723; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PROTEIN:2vy2_A:3D-footprint XX RN [1]; RX PUBMED: 18784751 RL Hamès C, Ptchelkine D, Grimm C, Thevenon E, Moyroud E, Gérard F, Martiel J.L, Benlloch R, Parcy F, Müller C.W. Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins. The EMBO journal 27:2628-37 (2008). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC/3swm_ABD/3D-footprint XX ID NAC:3swm_ABD:3D-footprint XX NA NAC XX DE The NAC domain of ANAC019 in complex with DNA, gold derivative XX BF 9574; BF 9575; XX P0 A C G T 01 3 3 3 87 T 02 3 3 87 3 G 03 3 87 3 3 C 04 24 24 24 24 n 05 3 3 3 87 T 06 0 0 96 0 G 07 24 24 24 24 n 08 24 24 24 24 n 09 24 24 24 24 n 10 24 24 24 24 n 11 24 24 24 24 n 12 24 24 24 24 n 13 60 12 9 15 a 14 3 87 3 3 C 15 0 0 96 0 G 16 15 66 3 12 C 17 96 0 0 0 A 18 96 0 0 0 A XX BS 26866; BS 26867; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC:3swm_ABD:3D-footprint XX RN [1]; RX PUBMED: 22455904 RL Welner D.H, Lindemose S, Grossmann J.G, Møllegaard N.E, Olsen A.N, Helgstrand C, Skriver K, Lo Leggio L. DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. The Biochemical journal 444:395-404 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC/3swm_B/3D-footprint XX ID NAC:3swm_B:3D-footprint XX NA NAC XX DE The NAC domain of ANAC019 in complex with DNA, gold derivative XX BF 9575; XX P0 A C G T 01 0 89 1 6 C 02 75 9 6 6 A 03 24 24 24 24 n 04 6 6 78 6 G 05 6 75 6 9 C 06 75 6 9 6 A XX BS 26866; BS 26867; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC:3swm_B:3D-footprint XX RN [1]; RX PUBMED: 22455904 RL Welner D.H, Lindemose S, Grossmann J.G, Møllegaard N.E, Olsen A.N, Helgstrand C, Skriver K, Lo Leggio L. DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. The Biochemical journal 444:395-404 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC/3swp_A/3D-footprint XX ID NAC:3swp_A:3D-footprint XX NA NAC XX DE ANAC019 NAC domain in complex with DNA XX BF 9574; XX P0 A C G T 01 9 67 11 9 C 02 0 0 96 0 G 03 67 9 11 9 A 04 67 9 11 9 A 05 0 0 96 0 G XX BS 26868; BS 26869; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC:3swp_A:3D-footprint XX RN [1]; RX PUBMED: 22455904 RL Welner D.H, Lindemose S, Grossmann J.G, Møllegaard N.E, Olsen A.N, Helgstrand C, Skriver K, Lo Leggio L. DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. The Biochemical journal 444:395-404 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NAC/3swp_ABCD/3D-footprint XX ID NAC:3swp_ABCD:3D-footprint XX NA NAC XX DE ANAC019 NAC domain in complex with DNA XX BF 9574; BF 9575; BF 9576; XX P0 A C G T 01 0 96 0 0 C 02 13 14 56 13 g 03 24 24 24 24 n 04 0 0 0 96 T 05 15 8 4 69 T 06 13 67 8 8 C 07 24 24 24 24 n 08 96 0 0 0 A 09 24 24 24 24 n 10 24 24 24 24 n 11 24 24 24 24 n 12 6 82 4 4 C 13 0 0 96 0 G 14 87 4 5 0 A 15 92 4 0 0 A 16 0 0 96 0 G XX BS 26868; BS 26869; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NAC:3swp_ABCD:3D-footprint XX RN [1]; RX PUBMED: 22455904 RL Welner D.H, Lindemose S, Grossmann J.G, Møllegaard N.E, Olsen A.N, Helgstrand C, Skriver K, Lo Leggio L. DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. The Biochemical journal 444:395-404 (2012). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP910/bZIP910/1)(Athamap XX ID bZIP910:bZIP910:1)(Athamap XX NA bZIP910 XX DE bZIP transcription factor from Antirrhinum majus XX OS Antirrhinum majus XX BF 1339; XX P0 A C G T 01 0 0 18 0 G 02 14 0 4 0 A 03 0 0 0 18 T 04 0 0 18 0 G 05 18 0 0 0 A 06 0 18 0 0 C 07 0 0 18 0 G 08 0 0 0 18 T 09 0 0 18 0 G 10 0 0 17 1 G 11 0 18 0 0 C 12 10 8 0 0 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP910:bZIP910:1)(Athamap XX CC sequences selected with recombinant bZIP910 from a pool of double-stranded oligonucleotides containing a core of 12 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FLORICAULA/LEAFY/4bhk_A/3D-footprint XX ID FLORICAULA/LEAFY:4bhk_A:3D-footprint XX NA FLORICAULA/LEAFY XX DE Crystal Structure of Moss Leafy bound to DNA XX BF 9624; XX P0 A C G T 01 0 0 96 0 G 02 0 0 96 0 G 03 72 0 24 0 R 04 24 54 6 12 m 05 0 0 96 0 G 06 24 12 54 6 r 07 0 18 6 72 T XX BS 26898; BS 26899; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FLORICAULA/LEAFY:4bhk_A:3D-footprint XX RN [1]; RX PUBMED: 24436181 RL Sayou C, Monniaux M, Nanao M.H, Moyroud E, Brockington S.F, Thévenon E, Chahtane H, Warthmann N, Melkonian M, Zhang Y, Wong G.K, Weigel D, Parcy F, Dumas R. A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity. Science (New York, N.Y.) 343:645-8 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FLORICAULA/LEAFY/4bhk_AB/3D-footprint XX ID FLORICAULA/LEAFY:4bhk_AB:3D-footprint XX NA FLORICAULA/LEAFY XX DE Crystal Structure of Moss Leafy bound to DNA XX BF 9624; XX P0 A C G T 01 7 3 81 5 G 02 3 2 86 5 G 03 24 24 24 24 n 04 0 96 0 0 C 05 1 1 77 17 G 06 72 10 7 7 A 07 0 96 0 0 C 08 0 96 0 0 C 09 24 24 24 24 n 10 24 24 24 24 n 11 24 24 24 24 n 12 0 0 96 0 G 13 0 0 96 0 G 14 49 0 47 0 r 15 21 69 3 3 C 16 0 0 96 0 G 17 13 5 65 13 g 18 4 5 5 82 T XX BS 26898; BS 26899; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FLORICAULA/LEAFY:4bhk_AB:3D-footprint XX RN [1]; RX PUBMED: 24436181 RL Sayou C, Monniaux M, Nanao M.H, Moyroud E, Brockington S.F, Thévenon E, Chahtane H, Warthmann N, Melkonian M, Zhang Y, Wong G.K, Weigel D, Parcy F, Dumas R. A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity. Science (New York, N.Y.) 343:645-8 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP910/bZIP910/2)(Athamap XX ID bZIP910:bZIP910:2)(Athamap XX NA bZIP910 XX DE bZIP transcription factor from Antirrhinum majus XX OS Antirrhinum majus XX BF 1339; XX P0 A C G T 01 0 0 17 0 G 02 1 4 10 2 g 03 6 1 9 1 r 04 2 1 2 12 T 05 0 1 16 0 G 06 1 15 1 0 C 07 0 0 0 17 T 08 0 0 17 0 G 09 17 0 0 0 A 10 0 17 0 0 C 11 0 0 17 0 G 12 0 0 0 17 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP910:bZIP910:2)(Athamap XX CC sequences selected with recombinant bZIP910 from a pool of double-stranded oligonucleotides containing a core of 12 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Auxin/4ldx_A/3D-footprint XX ID Auxin:4ldx_A:3D-footprint XX NA Auxin XX DE Crystal structure of the DNA binding domain of arabidopsis thaliana auxin response factor 1 (ARF1) in complex with protomor-like sequence ER7 XX BF 9693; XX P0 A C G T 01 0 0 96 0 G 02 0 0 96 0 G 03 7 9 73 7 G 04 73 7 7 9 A 05 24 24 24 24 n 06 73 7 9 7 A 07 0 96 0 0 C 08 96 0 0 0 A 09 73 9 7 7 A XX BS 26971; BS 26972; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Auxin:4ldx_A:3D-footprint XX RN [1]; RX PUBMED: 24485461 RL Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Auxin/4ldx_AB/3D-footprint XX ID Auxin:4ldx_AB:3D-footprint XX NA Auxin XX DE Crystal structure of the DNA binding domain of arabidopsis thaliana auxin response factor 1 (ARF1) in complex with protomor-like sequence ER7 XX BF 9693; BF 9694; XX P0 A C G T 01 0 0 0 96 T 02 0 0 0 96 T 03 0 0 96 0 G 04 3 16 1 76 T 05 24 24 24 24 n 06 17 11 11 57 t 07 13 69 3 11 C 08 0 96 0 0 C 09 1 84 8 3 C 10 24 24 24 24 n 11 24 24 24 24 n 12 24 24 24 24 n 13 1 1 93 1 G 14 0 0 96 0 G 15 6 3 84 3 G 16 72 16 3 5 A 17 24 24 24 24 n 18 94 1 0 1 A 19 0 94 2 0 C 20 96 0 0 0 A XX BS 26971; BS 26972; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Auxin:4ldx_AB:3D-footprint XX RN [1]; RX PUBMED: 24485461 RL Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP911/bZIP911/1)(Athamap XX ID bZIP911:bZIP911:1)(Athamap XX NA bZIP911 XX DE bZIP transcription factor from Antirrhinum majus XX OS Antirrhinum majus XX BF 1340; XX P0 A C G T 01 1 0 21 0 G 02 10 0 12 0 r 03 0 0 0 22 T 04 0 0 22 0 G 05 22 0 0 0 A 06 0 22 0 0 C 07 0 0 22 0 G 08 0 0 0 22 T 09 0 0 22 0 G 10 0 0 22 0 G 11 4 18 0 0 C 12 1 21 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP911:bZIP911:1)(Athamap XX CC sequences selected with recombinant bZIP911 from a pool of double-stranded oligonucleotides containing a core of 12 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP911/bZIP911/2)(Athamap XX ID bZIP911:bZIP911:2)(Athamap XX NA bZIP911 XX DE bZIP transcription factor from Antirrhinum majus XX OS Antirrhinum majus XX BF 1340; XX P0 A C G T 01 0 0 10 0 G 02 6 0 4 0 r 03 0 0 0 10 T 04 0 0 10 0 G 05 10 0 0 0 A 06 0 10 0 0 C 07 0 0 10 0 G 08 0 0 0 10 T 09 0 0 10 0 G 10 0 0 0 10 T 11 8 1 1 0 A 12 0 10 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP911:bZIP911:2)(Athamap XX CC sequences selected with recombinant bZIP911 from a pool of double-stranded oligonucleotides containing a core of 12 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 9680995 RL Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Transcription/5gnj_GIN/3D-footprint XX ID Transcription:5gnj_GIN:3D-footprint XX NA Transcription XX DE Structure of a transcription factor and DNA complex XX BF 17575; BF 17576; XX P0 A C G T 01 0 92 3 1 C 02 59 13 8 16 a 03 4 80 4 8 C 04 3 19 67 7 G 05 13 8 13 62 t 06 0 2 93 1 G 07 19 20 19 38 t XX BS 60750; BS 60751; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Transcription:5gnj_GIN:3D-footprint XX RN [1]; RX PUBMED: 28514654 RL Lian TF, Xu YP, Li LF, Su XD. Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA. Cell Rep 19:1334-1342 (2017). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Transcription/5gnj_I/3D-footprint XX ID Transcription:5gnj_I:3D-footprint XX NA Transcription XX DE Structure of a transcription factor and DNA complex XX BF 17576; XX P0 A C G T 01 67 11 9 9 A 02 0 96 0 0 C 03 96 0 0 0 A 04 9 67 11 9 C 05 9 9 67 11 G XX BS 60750; BS 60751; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Transcription:5gnj_I:3D-footprint XX RN [1]; RX PUBMED: 28514654 RL Lian TF, Xu YP, Li LF, Su XD. Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA. Cell Rep 19:1334-1342 (2017). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Ethylene-responsive/5wx9_A/3D-footprint XX ID Ethylene-responsive:5wx9_A:3D-footprint XX NA Ethylene-responsive XX DE Crystal Structure of AtERF96 with GCC-box XX BF 10427; XX P0 A C G T 01 0 96 0 0 C 02 0 0 0 96 T 03 0 0 96 0 G 04 0 0 96 0 G 05 13 57 13 13 c 06 0 0 96 0 G 07 0 0 96 0 G 08 0 96 0 0 C 09 0 0 0 96 T 10 54 13 16 13 a XX BS 34906; BS 34907; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Ethylene-responsive:5wx9_A:3D-footprint XX RN [1]; RX PUBMED: 32813232 RL Chen CY, Lin PH, Chen KH, Cheng YS. Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box. Plant Mol Biol : (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B3/5yzy_C/3D-footprint XX ID B3:5yzy_C:3D-footprint XX NA B3 XX DE AtVAL1 B3 domain in complex with 13bp-DNA XX BF 17674; XX P0 A C G T 01 13 57 13 13 c 02 96 0 0 0 A 03 0 0 0 96 T 04 0 0 96 0 G 05 0 96 0 0 C 06 57 13 13 13 a XX BS 60953; BS 60954; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B3:5yzy_C:3D-footprint XX RN [1]; RX PUBMED: 29733847 RL Wu B, Zhang M, Su S, Liu H, Gan J, Ma J. Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana. Biochem Biophys Res Commun 501:415-422 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B3/5yzz_C/3D-footprint XX ID B3:5yzz_C:3D-footprint XX NA B3 XX DE AtVAL1 B3 domain in complex with 13bp-DNA XX BF 17674; XX P0 A C G T 01 9 67 9 11 C 02 87 3 3 3 A 03 7 7 7 75 T 04 0 0 96 0 G 05 7 75 7 7 C 06 52 14 16 14 a XX BS 60953; BS 60954; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B3:5yzz_C:3D-footprint XX RN [1]; RX PUBMED: 29733847 RL Wu B, Zhang M, Su S, Liu H, Gan J, Ma J. Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana. Biochem Biophys Res Commun 501:415-422 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B3/5z00_K/3D-footprint XX ID B3:5z00_K:3D-footprint XX NA B3 XX DE AtVAL1 B3 domain in complex with 15bp-DNA XX BF 17674; XX P0 A C G T 01 13 16 54 13 g 02 0 96 0 0 C 03 96 0 0 0 A 04 0 0 0 96 T 05 13 13 57 13 g XX BS 60955; BS 60956; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B3:5z00_K:3D-footprint XX RN [1]; RX PUBMED: 29733847 RL Wu B, Zhang M, Su S, Liu H, Gan J, Ma J. Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana. Biochem Biophys Res Commun 501:415-422 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Lysine-specific/6a57_A/3D-footprint XX ID Lysine-specific:6a57_A:3D-footprint XX NA Lysine-specific XX DE Structure of histone demethylase REF6 complexed with DNA XX BF 17860; XX P0 A C G T 01 69 9 9 9 A 02 10 86 0 0 C 03 69 9 9 9 A 04 10 0 86 0 G 05 86 0 10 0 A 06 0 0 96 0 G XX BS 61351; BS 61352; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Lysine-specific:6a57_A:3D-footprint XX RN [1]; RX PUBMED: 32257379 RL Tian Z, Li X, Li M, Wu W, Zhang M, Tang C, Li Z, Liu Y, Chen Z, Yang M, Ma L, Caba C, Tong Y, Lam HM, Dai S, Chen Z. Crystal structures of REF6 and its complex with DNA reveal diverse recognition mechanisms. Cell Discov : (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CDC5/CDC5/Athamap XX ID CDC5:CDC5:Athamap XX NA CDC5 XX DE transcriptional activator XX OS Arabidopsis thaliana XX BF 4767; BF 17387; XX P0 A C G T 01 28 24 32 15 r 02 17 26 55 2 s 03 0 92 4 4 C 04 2 2 0 96 T 05 6 85 0 8 C 06 91 2 2 4 A 07 2 0 93 4 G 08 2 93 5 0 C 09 4 4 91 0 G 10 2 55 27 16 s 11 18 23 45 14 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CDC5:CDC5:Athamap XX CC sequences selected with recombinant CDC5 from a pool of double-stranded oligonucleotides containing a core of 26 and 14 random nucleotides; 8-10 rounds of selection and amplification; figures are percentages; SELEX XX RN [1]; RX PUBMED: 8917598 RL Hirayama T., Shinozaki K. A cdc5+ homolog of a higher plant, Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 93:13371-13376 (1996). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B3/6fas_B/3D-footprint XX ID B3:6fas_B:3D-footprint XX NA B3 XX DE Crystal structure of VAL1 B3 domain in complex with cognate DNA XX BF 17704; XX P0 A C G T 01 1 76 0 19 C 02 96 0 0 0 A 03 0 0 0 96 T 04 19 19 39 19 g 05 0 96 0 0 C XX BS 60994; BS 60995; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B3:6fas_B:3D-footprint XX RN [1]; RX PUBMED: 29660015 RL Sasnauskas G, Kauneckaite K, Siksnys V. Structural basis of DNA target recognition by the B3 domain of Arabidopsis epigenome reader VAL1. Nucleic Acids Res 46:4316-4324 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC OsWRKY45/6ir8_A/3D-footprint XX ID OsWRKY45:6ir8_A:3D-footprint XX NA OsWRKY45 XX DE Rice WRKY/DNA complex XX BF 17850; XX P0 A C G T 01 19 19 19 39 t 02 24 24 24 24 n 03 24 24 24 24 n 04 24 24 24 24 n 05 96 0 0 0 A 06 0 96 0 0 C 07 0 77 0 19 C XX BS 61246; BS 61247; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=OsWRKY45:6ir8_A:3D-footprint XX RN [1]; RX PUBMED: 30783673 RL Cheng X, Zhao Y, Jiang Q, Yang J, Zhao W, Taylor IA, Peng YL, Wang D, Liu J. Structural basis of dimerization and dual W-box DNA recognition by rice WRKY domain. Nucleic Acids Res 47:4308-4318 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Probable/6j4f_F/3D-footprint XX ID Probable:6j4f_F:3D-footprint XX NA Probable XX DE Crystal structure of the AtWRKY2 domain XX BF 18224; XX P0 A C G T 01 0 0 96 0 G 02 0 0 96 0 G 03 0 0 0 96 T 04 24 24 24 24 n 05 24 24 24 24 n 06 67 9 11 9 A 07 67 9 9 11 A 08 9 9 67 11 G XX BS 68347; BS 68348; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Probable:6j4f_F:3D-footprint XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Lysine-specific/6jnm_A/3D-footprint XX ID Lysine-specific:6jnm_A:3D-footprint XX NA Lysine-specific XX DE REF6 ZnF2-4-NAC004-mC3 complex XX BF 17851; XX P0 A C G T 01 0 96 0 0 C 02 7 4 4 81 T 03 24 24 24 24 n 04 0 0 0 96 T 05 0 0 96 0 G 06 1 1 1 93 T 07 20 19 19 38 t XX BS 61248; BS 68351; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Lysine-specific:6jnm_A:3D-footprint XX RN [1]; RX PUBMED: 31048693 RL Qiu Q, Mei H, Deng X, He K, Wu B, Yao Q, Zhang J, Lu F, Ma J, Cao X. DNA methylation repels targeting of Arabidopsis REF6. Nat Commun 10:2063 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Lysine-specific/6jnn_AN/3D-footprint XX ID Lysine-specific:6jnn_AN:3D-footprint XX NA Lysine-specific XX DE REF6 ZnF2-4-NAC004-mC1 complex XX BF 17851; XX P0 A C G T 01 96 0 0 0 A 02 0 41 0 55 y 03 46 10 10 30 w 04 5 0 90 1 G 05 96 0 0 0 A 06 10 13 43 30 k 07 24 24 24 24 n 08 24 24 24 24 n 09 24 24 24 24 n 10 24 24 24 24 n 11 0 0 0 96 T 12 8 76 2 10 C 13 0 0 0 96 T 14 0 0 96 0 G 15 0 0 0 96 T 16 74 0 1 21 A XX BS 68352; BS 68353; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Lysine-specific:6jnn_AN:3D-footprint XX RN [1]; RX PUBMED: 31048693 RL Qiu Q, Mei H, Deng X, He K, Wu B, Yao Q, Zhang J, Lu F, Ma J, Cao X. DNA methylation repels targeting of Arabidopsis REF6. Nat Commun 10:2063 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TATA-box-binding/6njq_A/3D-footprint XX ID TATA-box-binding:6njq_A:3D-footprint XX NA TATA-box-binding XX DE Structure of TBP-Hoogsteen containing DNA complex XX BF 9320; XX P0 A C G T 01 9 9 69 9 G 02 11 9 9 67 T 03 0 0 0 96 T 04 0 0 0 96 T 05 67 9 11 9 A 06 0 0 0 96 T 07 96 0 0 0 A XX BS 26543; BS 26544; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TATA-box-binding:6njq_A:3D-footprint XX RN [1]; RX PUBMED: 31268220 RL Stelling AL, Liu AY, Zeng W, Salinas R, Schumacher MA, Al-Hashimi HM. Infrared Spectroscopic Observation of a G-C(+) Hoogsteen Base Pair in the DNA:TATA-Box Binding Protein Complex Under Solution Conditions. Angew Chem Int Ed Engl 58:12010-12013 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Nuclear/6r2v_A/3D-footprint XX ID Nuclear:6r2v_A:3D-footprint XX NA Nuclear XX DE Arabidopsis NF-Y/CCAAT-box complex XX BF 18244; XX P0 A C G T 01 0 96 0 0 C 02 0 96 0 0 C 03 96 0 0 0 A 04 96 0 0 0 A 05 0 0 0 96 T 06 13 54 13 16 c 07 13 54 16 13 c XX BS 68380; BS 68381; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Nuclear:6r2v_A:3D-footprint XX RN [1]; RX PUBMED: 33098724 RL Chaves-Sanjuan A, Gnesutta N, Gobbini A, Martignago D, Bernardini A, Fornara F, Mantovani R, Nardini M. Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants. Plant J : (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryd_EF/3D-footprint XX ID Protein:6ryd_EF:3D-footprint XX NA Protein XX DE WUS-HD bound to TGAA DNA XX BF 18245; BF 18246; XX P0 A C G T 01 8 8 72 8 G 02 0 8 0 88 T 03 0 0 0 96 T 04 0 96 0 0 C 05 80 0 8 8 A 06 1 8 0 87 T 07 0 0 0 96 T 08 0 96 0 0 C 09 96 0 0 0 A 10 11 8 8 69 T XX BS 68382; BS 68383; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryd_EF:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryd_F/3D-footprint XX ID Protein:6ryd_F:3D-footprint XX NA Protein XX DE WUS-HD bound to TGAA DNA XX BF 18246; XX P0 A C G T 01 67 9 11 9 A 02 0 0 0 96 T 03 0 0 96 0 G 04 96 0 0 0 A 05 96 0 0 0 A 06 9 11 9 67 T 07 9 9 57 21 g XX BS 68382; BS 68383; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryd_F:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryi_AB/3D-footprint XX ID Protein:6ryi_AB:3D-footprint XX NA Protein XX DE WUS-HD bound to G-Box DNA XX BF 18247; XX P0 A C G T 01 7 73 7 9 C 02 7 73 9 7 C 03 73 7 9 7 A 04 0 0 0 96 T 05 0 96 0 0 C 06 96 0 0 0 A 07 9 73 7 7 C 08 0 0 96 0 G 09 0 0 0 96 T 10 0 0 96 0 G 11 96 0 0 0 A 12 0 96 0 0 C 13 24 24 24 24 n 14 96 0 0 0 A XX BS 68384; BS 68385; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryi_AB:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryi_DE/3D-footprint XX ID Protein:6ryi_DE:3D-footprint XX NA Protein XX DE WUS-HD bound to G-Box DNA XX BF 18248; XX P0 A C G T 01 72 8 8 8 A 02 0 0 0 96 T 03 0 96 0 0 C 04 96 0 0 0 A 05 16 48 16 16 c 06 8 16 56 16 g 07 0 0 0 96 T 08 0 0 96 0 G 09 96 0 0 0 A XX BS 68386; BS 68387; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryi_DE:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryi_E/3D-footprint XX ID Protein:6ryi_E:3D-footprint XX NA Protein XX DE WUS-HD bound to G-Box DNA XX BF 18248; XX P0 A C G T 01 49 16 16 15 a 02 3 5 4 84 T 03 0 95 0 1 C 04 68 8 14 6 A XX BS 68386; BS 68387; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryi_E:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryl_ABC/3D-footprint XX ID Protein:6ryl_ABC:3D-footprint XX NA Protein XX DE WUS-HD bound to TAAT DNA XX BF 18249; BF 18250; XX P0 A C G T 01 8 76 8 4 C 02 76 8 4 8 A 03 96 0 0 0 A 04 8 72 12 4 C 05 92 4 0 0 A 06 12 64 8 12 c 07 24 24 24 24 n 08 4 0 4 88 T 09 0 0 0 96 T 10 96 0 0 0 A 11 96 0 0 0 A 12 0 96 0 0 C 13 24 24 24 24 n 14 84 8 0 4 A XX BS 68388; BS 68389; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryl_ABC:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryl_DE/3D-footprint XX ID Protein:6ryl_DE:3D-footprint XX NA Protein XX DE WUS-HD bound to TAAT DNA XX BF 18251; BF 18250; XX P0 A C G T 01 3 0 1 92 T 02 1 32 1 62 y 03 90 1 1 4 A 04 96 0 0 0 A 05 7 8 7 74 T 06 7 1 81 7 G 07 1 90 5 0 C 08 0 0 95 1 G 09 0 0 0 96 T 10 1 1 1 93 T 11 1 29 53 13 s 12 7 7 6 76 T XX BS 68388; BS 68389; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryl_DE:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Protein/6ryl_E/3D-footprint XX ID Protein:6ryl_E:3D-footprint XX NA Protein XX DE WUS-HD bound to TAAT DNA XX BF 18250; XX P0 A C G T 01 11 67 9 9 C 02 69 9 9 9 A 03 0 0 0 96 T 04 0 0 0 96 T 05 69 9 9 9 A 06 96 0 0 0 A XX BS 68388; BS 68389; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Protein:6ryl_E:3D-footprint XX RN [1]; RX PUBMED: 32376862 RL Sloan J, Hakenjos JP, Gebert M, Ermakova O, Gumiero A, Stier G, Wild K, Sinning I, Lohmann JU. Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL. Nat Commun 11:2223 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Auxin/6sdg_AB/3D-footprint XX ID Auxin:6sdg_AB:3D-footprint XX NA Auxin XX DE Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA XX BF 18252; BF 18253; XX P0 A C G T 01 15 16 15 50 t 02 0 0 0 96 T 03 0 0 96 0 G 04 0 0 0 96 T 05 11 60 15 10 c 06 0 0 96 0 G 07 0 0 96 0 G 08 0 96 0 0 C 09 24 24 24 24 n 10 24 24 24 24 n 11 24 24 24 24 n 12 24 24 24 24 n 13 24 24 24 24 n 14 0 0 96 0 G 15 0 96 0 0 C 16 15 65 10 6 c 17 24 24 24 24 n 18 80 5 6 5 A 19 0 96 0 0 C 20 96 0 0 0 A XX BS 68390; BS 68391; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Auxin:6sdg_AB:3D-footprint XX RN [1]; RX PUBMED: 32415296 RL Kato H, Mutte SK, Suzuki H, Crespo I, Das S, Radoeva T, Fontana M, Yoshitake Y, Hainiwa E, van den Berg W, Lindhoud S, Ishizaki K, Hohlbein J, Borst JW, Boer DR, Nishihama R, Kohchi T, Weijers D. Design principles of a minimal auxin response system. Nat Plants 6:473-482 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Auxin/6sdg_B/3D-footprint XX ID Auxin:6sdg_B:3D-footprint XX NA Auxin XX DE Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA XX BF 18253; XX P0 A C G T 01 21 21 21 33 t 02 0 0 0 96 T 03 0 0 96 0 G 04 0 0 0 96 T 05 23 42 21 10 c 06 0 0 96 0 G 07 0 0 96 0 G 08 0 96 0 0 C XX BS 68390; BS 68391; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Auxin:6sdg_B:3D-footprint XX RN [1]; RX PUBMED: 32415296 RL Kato H, Mutte SK, Suzuki H, Crespo I, Das S, Radoeva T, Fontana M, Yoshitake Y, Hainiwa E, van den Berg W, Lindhoud S, Ishizaki K, Hohlbein J, Borst JW, Boer DR, Nishihama R, Kohchi T, Weijers D. Design principles of a minimal auxin response system. Nat Plants 6:473-482 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TATA-box-binding/6ueo_G/3D-footprint XX ID TATA-box-binding:6ueo_G:3D-footprint XX NA TATA-box-binding XX DE Structure of A. thaliana TBP-AC mismatch DNA site XX BF 9320; XX P0 A C G T 01 0 0 0 96 T 02 96 0 0 0 A 03 0 0 0 96 T 04 96 0 0 0 A 05 96 0 0 0 A 06 67 11 9 9 A 07 67 9 11 9 A 08 11 9 67 9 G XX BS 26561; BS 68399; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TATA-box-binding:6ueo_G:3D-footprint XX RN [1]; RX PUBMED: 33087930 RL Afek A, Shi H, Rangadurai A, Sahay H, Senitzki A, Xhani S, Fang M, Salinas R, Mielko Z, Pufall MA, Poon GMK, Haran TE, Schumacher MA, Al-Hashimi HM, Gordân R. DNA mismatches reveal conformational penalties in protein-DNA recognition. Nature 587:291-296 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TATA-box-binding/6uep_B/3D-footprint XX ID TATA-box-binding:6uep_B:3D-footprint XX NA TATA-box-binding XX DE Structure of A. thaliana TBP bound to a DNA site with a C-C mismatch XX BF 18259; XX P0 A C G T 01 13 54 13 16 c 02 0 96 0 0 C 03 16 13 13 54 t 04 0 0 0 96 T 05 0 0 0 96 T 06 96 0 0 0 A 07 0 0 0 96 T 08 96 0 0 0 A XX BS 26543; BS 68399; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TATA-box-binding:6uep_B:3D-footprint XX RN [1]; RX PUBMED: 33087930 RL Afek A, Shi H, Rangadurai A, Sahay H, Senitzki A, Xhani S, Fang M, Salinas R, Mielko Z, Pufall MA, Poon GMK, Haran TE, Schumacher MA, Al-Hashimi HM, Gordân R. DNA mismatches reveal conformational penalties in protein-DNA recognition. Nature 587:291-296 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TATA-box-binding/6ueq_B/3D-footprint XX ID TATA-box-binding:6ueq_B:3D-footprint XX NA TATA-box-binding XX DE Structure of TBP bound to C-C mismatch containing TATA site XX BF 9320; XX P0 A C G T 01 0 85 10 1 C 02 0 0 0 96 T 03 12 10 10 64 t 04 1 0 10 85 T 05 0 0 0 96 T 06 96 0 0 0 A 07 0 0 0 96 T 08 64 10 12 10 a XX BS 68400; BS 26562; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TATA-box-binding:6ueq_B:3D-footprint XX RN [1]; RX PUBMED: 33087930 RL Afek A, Shi H, Rangadurai A, Sahay H, Senitzki A, Xhani S, Fang M, Salinas R, Mielko Z, Pufall MA, Poon GMK, Haran TE, Schumacher MA, Al-Hashimi HM, Gordân R. DNA mismatches reveal conformational penalties in protein-DNA recognition. Nature 587:291-296 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TATA-box-binding/6uer_A/3D-footprint XX ID TATA-box-binding:6uer_A:3D-footprint XX NA TATA-box-binding XX DE Crystal form 2: Structure of TBP bound to C-C mismatch at pH 7 XX BF 9320; XX P0 A C G T 01 16 54 13 13 c 02 0 96 0 0 C 03 16 13 13 54 t 04 0 0 0 96 T 05 0 0 0 96 T 06 96 0 0 0 A 07 0 0 0 96 T 08 96 0 0 0 A XX BS 26543; BS 68399; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TATA-box-binding:6uer_A:3D-footprint XX RN [1]; RX PUBMED: 33087930 RL Afek A, Shi H, Rangadurai A, Sahay H, Senitzki A, Xhani S, Fang M, Salinas R, Mielko Z, Pufall MA, Poon GMK, Haran TE, Schumacher MA, Al-Hashimi HM, Gordân R. DNA mismatches reveal conformational penalties in protein-DNA recognition. Nature 587:291-296 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Auxin/6ycq_A/3D-footprint XX ID Auxin:6ycq_A:3D-footprint XX NA Auxin XX DE Crystal structure of the DNA binding domain of Arabidopsis thaliana Auxin Response Factor 1 (AtARF1) in complex with High Affinity DNA XX BF 18279; XX P0 A C G T 01 0 0 0 96 T 02 0 0 0 96 T 03 0 0 96 0 G 04 12 12 12 60 t 05 0 96 0 0 C 06 0 0 96 0 G 07 12 12 60 12 g 08 0 84 12 0 C XX BS 68424; BS 68425; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Auxin:6ycq_A:3D-footprint XX RN [1]; RX PUBMED: 32929017 RL Freire-Rios A, Tanaka K, Crespo I, van der Wijk E, Sizentsova Y, Levitsky V, Lindhoud S, Fontana M, Hohlbein J, Boer DR, Mironova V, Weijers D. Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis. Proc Natl Acad Sci U S A 117:24557-24566 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Auxin/6ycq_AB/3D-footprint XX ID Auxin:6ycq_AB:3D-footprint XX NA Auxin XX DE Crystal structure of the DNA binding domain of Arabidopsis thaliana Auxin Response Factor 1 (AtARF1) in complex with High Affinity DNA XX BF 18279; BF 18280; XX P0 A C G T 01 0 0 0 96 T 02 0 0 96 0 G 03 4 12 4 76 T 04 0 96 0 0 C 05 0 0 96 0 G 06 4 7 76 9 G 07 6 19 9 62 t 08 24 24 24 24 n 09 24 24 24 24 n 10 24 24 24 24 n 11 24 24 24 24 n 12 24 24 24 24 n 13 0 0 96 0 G 14 4 76 9 7 C 15 0 96 0 0 C 16 0 0 96 0 G 17 72 9 9 6 A 18 0 96 0 0 C 19 96 0 0 0 A 20 96 0 0 0 A XX BS 68424; BS 68425; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Auxin:6ycq_AB:3D-footprint XX RN [1]; RX PUBMED: 32929017 RL Freire-Rios A, Tanaka K, Crespo I, van der Wijk E, Sizentsova Y, Levitsky V, Lindhoud S, Fontana M, Hohlbein J, Boer DR, Mironova V, Weijers D. Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis. Proc Natl Acad Sci U S A 117:24557-24566 (2020). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6N2H0_MAIZE/ARF10/EEADannot XX ID A0A1D6N2H0_MAIZE:ARF10:EEADannot XX NA A0A1D6N2H0_MAIZE XX DE A0A1D6N2H0_MAIZE XX OS Zea mays XX BF 18306; XX P0 A C G T 01 290 153 1981 110 G 02 126 144 2172 91 G 03 93 170 2203 68 G 04 731 143 1589 71 r 05 222 84 2162 65 G 06 1894 124 455 62 A 07 71 2307 82 74 C 08 2126 87 270 51 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6N2H0_MAIZE:ARF10:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC K7U085_MAIZE/ARF13/EEADannot XX ID K7U085_MAIZE:ARF13:EEADannot XX NA K7U085_MAIZE XX DE K7U085_MAIZE XX OS Zea mays XX BF 18307; XX P0 A C G T 01 153 47 2552 41 G 02 67 47 2659 21 G 03 30 47 2696 21 G 04 597 27 2150 19 G 05 110 21 2645 17 G 06 2278 34 463 18 A 07 19 2724 28 22 C 08 2587 34 158 14 A 09 667 1360 19 748 y 10 99 51 2037 606 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=K7U085_MAIZE:ARF13:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC C4JAZ4_MAIZE/ARF14/EEADannot XX ID C4JAZ4_MAIZE:ARF14:EEADannot XX NA C4JAZ4_MAIZE XX DE C4JAZ4_MAIZE XX OS Zea mays XX BF 18308; XX P0 A C G T 01 196 133 1205 127 G 02 0 0 1659 0 G 03 103 0 1556 0 G 04 166 0 1465 28 G 05 101 34 1524 0 G 06 1565 0 94 0 A 07 0 1635 24 0 C 08 1611 0 49 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=C4JAZ4_MAIZE:ARF14:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6GSS0_MAIZE/ARF18/EEADannot XX ID A0A1D6GSS0_MAIZE:ARF18:EEADannot XX NA A0A1D6GSS0_MAIZE XX DE A0A1D6GSS0_MAIZE XX OS Zea mays XX BF 18309; XX P0 A C G T 01 179 3178 162 327 C 02 1431 2414 0 0 m 03 0 0 3845 0 G 04 3845 0 0 0 A 05 0 3845 0 0 C 06 3845 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6GSS0_MAIZE:ARF18:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6GSS0_MAIZE/ARF18_DYAD13/EEADannot XX ID A0A1D6GSS0_MAIZE:ARF18_DYAD13:EEADannot XX NA A0A1D6GSS0_MAIZE XX DE A0A1D6GSS0_MAIZE XX OS Zea mays XX BF 18309; XX P0 A C G T 01 52 135 81 56 s 02 270 321 179 104 m 03 171 42 622 39 G 04 874 0 0 0 A 05 0 874 0 0 C 06 777 44 39 14 A 07 289 139 200 246 w 08 229 191 266 188 r 09 262 178 215 219 w 10 240 170 199 265 w 11 211 184 225 254 k 12 202 184 239 249 k 13 223 214 214 223 w 14 249 239 184 202 m 15 254 225 184 211 m 16 265 199 170 240 w 17 219 215 178 262 w 18 188 266 191 229 y 19 246 200 139 289 w 20 14 39 44 777 T 21 0 0 874 0 G 22 0 0 0 874 T 23 39 622 42 171 C 24 104 179 321 270 k 25 56 81 135 52 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6GSS0_MAIZE:ARF18_DYAD13:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6GSS0_MAIZE/ARF18_DYAD6/EEADannot XX ID A0A1D6GSS0_MAIZE:ARF18_DYAD6:EEADannot XX NA A0A1D6GSS0_MAIZE XX DE A0A1D6GSS0_MAIZE XX OS Zea mays XX BF 18309; XX P0 A C G T 01 63 139 56 45 c 02 378 339 170 75 m 03 229 73 603 57 g 04 962 0 0 0 A 05 0 962 0 0 C 06 849 67 34 12 A 07 289 212 235 226 a 08 274 233 281 174 r 09 384 195 185 198 a 10 365 259 163 175 m 11 241 360 134 227 m 12 401 326 144 91 m 13 236 74 600 52 g 14 962 0 0 0 A 15 0 962 0 0 C 16 878 50 21 13 A 17 343 169 199 251 w 18 243 140 159 117 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6GSS0_MAIZE:ARF18_DYAD6:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6GSS0_MAIZE/ARF18_DYAD7/EEADannot XX ID A0A1D6GSS0_MAIZE:ARF18_DYAD7:EEADannot XX NA A0A1D6GSS0_MAIZE XX DE A0A1D6GSS0_MAIZE XX OS Zea mays XX BF 18309; XX P0 A C G T 01 367 152 100 36 a 02 183 58 369 45 r 03 655 0 0 0 A 04 0 655 0 0 C 05 655 0 0 0 A 06 192 86 98 279 w 07 169 117 292 77 r 08 195 106 225 129 r 09 189 101 94 271 w 10 303 108 137 107 a 11 133 169 123 230 y 12 348 162 99 46 a 13 178 46 388 43 r 14 655 0 0 0 A 15 0 655 0 0 C 16 655 0 0 0 A 17 341 68 104 142 a 18 288 118 149 100 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6GSS0_MAIZE:ARF18_DYAD7:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC C0PH36_MAIZE/ARF25/EEADannot XX ID C0PH36_MAIZE:ARF25:EEADannot XX NA C0PH36_MAIZE XX DE C0PH36_MAIZE XX OS Zea mays XX BF 17939; XX P0 A C G T 01 285 159 2019 168 G 02 111 126 2250 144 G 03 111 120 2328 71 G 04 1140 112 1323 55 r 05 118 34 2460 19 G 06 2450 67 93 20 A 07 22 2555 30 23 C 08 2422 30 158 20 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=C0PH36_MAIZE:ARF25:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC D9HNV4_MAIZE/ARF27/EEADannot XX ID D9HNV4_MAIZE:ARF27:EEADannot XX NA D9HNV4_MAIZE XX DE D9HNV4_MAIZE XX OS Zea mays XX BF 17963; XX P0 A C G T 01 298 2831 358 388 C 02 977 2898 0 0 M 03 0 0 3874 0 G 04 3874 0 0 0 A 05 0 3874 0 0 C 06 3451 423 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=D9HNV4_MAIZE:ARF27:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6JH51_MAIZE/ARF29/EEADannot XX ID A0A1D6JH51_MAIZE:ARF29:EEADannot XX NA A0A1D6JH51_MAIZE XX DE A0A1D6JH51_MAIZE XX OS Zea mays XX BF 18310; XX P0 A C G T 01 1 1 74 4367 T 02 0 0 4442 0 G 03 0 0 0 4442 T 04 0 4442 0 0 C 05 124 221 2370 1729 k 06 605 547 2866 426 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6JH51_MAIZE:ARF29:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A060D7X7_MAIZE/ARF34/EEADannot XX ID A0A060D7X7_MAIZE:ARF34:EEADannot XX NA A0A060D7X7_MAIZE XX DE A0A060D7X7_MAIZE XX OS Zea mays XX BF 17917; XX P0 A C G T 01 2916 1126 328 156 a 02 0 0 4525 0 G 03 4525 0 0 0 A 04 0 4525 0 0 C 05 4525 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A060D7X7_MAIZE:ARF34:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A060D7X7_MAIZE/ARF34_DYAD3/EEADannot XX ID A0A060D7X7_MAIZE:ARF34_DYAD3:EEADannot XX NA A0A060D7X7_MAIZE XX DE A0A060D7X7_MAIZE XX OS Zea mays XX BF 17917; XX P0 A C G T 01 3550 2107 2349 900 r 02 3272 674 4207 753 r 03 8906 0 0 0 A 04 0 8906 0 0 C 05 8906 0 0 0 A 06 2071 1647 1176 4012 t 07 2179 2274 2274 2179 s 08 4012 1176 1647 2071 a 09 0 0 0 8906 T 10 0 0 8906 0 G 11 0 0 0 8906 T 12 753 4207 674 3272 y 13 900 2349 2107 3550 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A060D7X7_MAIZE:ARF34_DYAD3:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6GVF5_MAIZE/ARF35/EEADannot XX ID A0A1D6GVF5_MAIZE:ARF35:EEADannot XX NA A0A1D6GVF5_MAIZE XX DE A0A1D6GVF5_MAIZE XX OS Zea mays XX BF 18311; XX P0 A C G T 01 0 0 471 3932 T 02 0 0 4403 0 G 03 0 34 0 4369 T 04 0 4403 0 0 C 05 0 26 3586 792 G 06 241 166 3720 277 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6GVF5_MAIZE:ARF35:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC C0PAG5_MAIZE/ARF36/EEADannot XX ID C0PAG5_MAIZE:ARF36:EEADannot XX NA C0PAG5_MAIZE XX DE C0PAG5_MAIZE XX OS Zea mays XX BF 18312; XX P0 A C G T 01 236 1216 194 292 c 02 250 106 1481 100 G 03 111 106 1634 86 G 04 70 134 1675 59 G 05 284 92 1499 62 G 06 150 67 1664 57 G 07 1624 94 185 35 A 08 54 1772 58 55 C 09 1722 66 111 39 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=C0PAG5_MAIZE:ARF36:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC C0PAG5_MAIZE/ARF36_DYAD11/EEADannot XX ID C0PAG5_MAIZE:ARF36_DYAD11:EEADannot XX NA C0PAG5_MAIZE XX DE C0PAG5_MAIZE XX OS Zea mays XX BF 18312; XX P0 A C G T 01 706 754 591 345 m 02 895 374 901 226 r 03 2396 0 0 0 A 04 0 2396 0 0 C 05 2396 0 0 0 A 06 856 460 383 697 w 07 635 602 728 431 v 08 597 474 616 709 k 09 576 583 694 543 g 10 611 615 453 717 h 11 602 596 596 602 w 12 717 453 615 611 d 13 543 694 583 576 c 14 709 616 474 597 m 15 431 728 602 635 b 16 697 383 460 856 w 17 0 0 0 2396 T 18 0 0 2396 0 G 19 0 0 0 2396 T 20 226 901 374 895 y 21 345 591 754 706 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=C0PAG5_MAIZE:ARF36_DYAD11:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6E9Y1_MAIZE/ARF39/EEADannot XX ID A0A1D6E9Y1_MAIZE:ARF39:EEADannot XX NA A0A1D6E9Y1_MAIZE XX DE A0A1D6E9Y1_MAIZE XX OS Zea mays XX BF 18313; XX P0 A C G T 01 0 0 2594 0 G 02 136 0 2458 0 G 03 283 0 2311 0 G 04 118 0 2476 0 G 05 2594 0 0 0 A 06 0 2573 21 0 C 07 2574 0 20 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6E9Y1_MAIZE:ARF39:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6E9Y1_MAIZE/ARF39_DYAD11/EEADannot XX ID A0A1D6E9Y1_MAIZE:ARF39_DYAD11:EEADannot XX NA A0A1D6E9Y1_MAIZE XX DE A0A1D6E9Y1_MAIZE XX OS Zea mays XX BF 18313; XX P0 A C G T 01 306 206 172 278 w 02 15 32 53 862 T 03 0 0 962 0 G 04 0 0 0 962 T 05 35 620 61 246 y 06 61 245 355 301 b 07 85 368 365 144 s 08 202 334 182 244 y 09 214 260 176 312 y 10 286 215 205 256 w 11 293 188 188 293 w 12 256 205 215 286 w 13 312 176 260 214 r 14 244 182 334 202 r 15 144 365 368 85 s 16 301 355 245 61 v 17 246 61 620 35 r 18 962 0 0 0 A 19 0 962 0 0 C 20 862 53 32 15 A 21 278 172 206 306 w 22 166 139 221 128 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6E9Y1_MAIZE:ARF39_DYAD11:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6E9Y1_MAIZE/ARF39_DYAD12/EEADannot XX ID A0A1D6E9Y1_MAIZE:ARF39_DYAD12:EEADannot XX NA A0A1D6E9Y1_MAIZE XX DE A0A1D6E9Y1_MAIZE XX OS Zea mays XX BF 18313; XX P0 A C G T 01 12 433 50 1383 T 02 0 0 1878 0 G 03 0 0 0 1878 T 04 89 1531 52 206 C 05 159 284 1129 306 g 06 533 315 417 613 w 07 182 767 688 241 s 08 244 690 644 300 s 09 874 201 446 357 a 10 722 605 212 339 m 11 339 212 605 722 k 12 357 446 201 874 t 13 300 644 690 244 s 14 241 688 767 182 s 15 613 417 315 533 w 16 306 1129 284 159 c 17 206 52 1531 89 G 18 1878 0 0 0 A 19 0 1878 0 0 C 20 1383 50 433 12 A 21 382 545 564 387 s 22 211 164 229 122 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6E9Y1_MAIZE:ARF39_DYAD12:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6DUR0_MAIZE/ARF4/EEADannot XX ID A0A1D6DUR0_MAIZE:ARF4:EEADannot XX NA A0A1D6DUR0_MAIZE XX DE A0A1D6DUR0_MAIZE XX OS Zea mays XX BF 18314; XX P0 A C G T 01 0 0 0 4649 T 02 18 15 4599 18 G 03 19 9 11 4611 T 04 27 4556 19 47 C 05 153 360 2298 1840 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6DUR0_MAIZE:ARF4:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6DUR0_MAIZE/ARF4_DYAD0/EEADannot XX ID A0A1D6DUR0_MAIZE:ARF4_DYAD0:EEADannot XX NA A0A1D6DUR0_MAIZE XX DE A0A1D6DUR0_MAIZE XX OS Zea mays XX BF 18314; XX P0 A C G T 01 950 569 589 350 a 02 982 359 735 382 r 03 2458 0 0 0 A 04 0 2458 0 0 C 05 2458 0 0 0 A 06 0 0 0 2458 T 07 0 0 2458 0 G 08 0 0 0 2458 T 09 382 735 359 982 y 10 350 589 569 950 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6DUR0_MAIZE:ARF4_DYAD0:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC D9HNT4_MAIZE/ARF7/EEADannot XX ID D9HNT4_MAIZE:ARF7:EEADannot XX NA D9HNT4_MAIZE XX DE D9HNT4_MAIZE XX OS Zea mays XX BF 17959; XX P0 A C G T 01 53 955 242 2335 y 02 28 78 3429 50 G 03 42 434 56 3054 T 04 60 3249 48 228 C 05 74 167 2944 400 G 06 195 232 2870 288 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=D9HNT4_MAIZE:ARF7:EEADannot XX RN [1]; RX PUBMED: 30375394 RL Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family. Nat Commun 9:4526 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BdTHX1/BdTHX1/EEADannot XX ID BdTHX1:BdTHX1:EEADannot XX NA BdTHX1 XX DE BdTHX1 XX OS Brachypodium distachyon XX BF 18315; XX P0 A C G T 01 11 27 10 52 y 02 30 0 5 65 w 03 1 0 5 94 T 04 0 0 0 100 T 05 7 9 0 84 T 06 94 4 0 2 A 07 0 99 0 1 C 08 2 61 1 36 y 09 9 9 71 11 G 10 0 67 12 21 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BdTHX1:BdTHX1:EEADannot XX RN [1]; RX PUBMED: 30224432 RL Fan M, Herburger K, Jensen JK, Zemelis-Durfee S, Brandizzi F, Fry SC, Wilkerson CG. A Trihelix Family Transcription Factor is Associated with Key Genes in Mixed-linkage Glucan Accumulation. Plant Physiol : (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CONS_ARATH/CONS1/EEADannot XX ID CONS_ARATH:CONS1:EEADannot XX NA CONS_ARATH XX DE CONS_ARATH XX OS Arabidopsis thaliana XX BF 18316; XX P0 A C G T 01 0 0 0 100 T 02 0 0 100 0 G 03 0 0 0 100 T 04 0 0 100 0 G 05 25 25 25 25 n 06 25 25 25 25 n 07 100 0 0 0 A 08 0 0 0 100 T 09 0 0 100 0 G XX BS 68436; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CONS_ARATH:CONS1:EEADannot XX RN [1]; RX PUBMED: 20406410 RL Tiwari SB, Shen Y, Chang HC, Hou Y, Harris A, Ma SF, McPartland M, Hymus GJ, Adam L, Marion C, Belachew A, Repetti PP, Reuber TL, Ratcliffe OJ. The flowering time regulator CONSTANS is recruited to the FLOWERING LOCUS T promoter via a unique cis-element. New Phytol 187:57-66 (2010). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CONS_ARATH/CONS2/EEADannot XX ID CONS_ARATH:CONS2:EEADannot XX NA CONS_ARATH XX DE CONS_ARATH XX OS Arabidopsis thaliana XX BF 18316; XX P0 A C G T 01 0 0 0 100 T 02 0 0 100 0 G 03 0 0 0 100 T 04 0 0 100 0 G 05 25 25 25 25 n 06 25 25 25 25 n 07 25 25 25 25 n 08 100 0 0 0 A 09 0 0 0 100 T 10 0 0 100 0 G XX BS 68437; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CONS_ARATH:CONS2:EEADannot XX RN [1]; RX PUBMED: 20406410 RL Tiwari SB, Shen Y, Chang HC, Hou Y, Harris A, Ma SF, McPartland M, Hymus GJ, Adam L, Marion C, Belachew A, Repetti PP, Reuber TL, Ratcliffe OJ. The flowering time regulator CONSTANS is recruited to the FLOWERING LOCUS T promoter via a unique cis-element. New Phytol 187:57-66 (2010). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC Os02g54160.1/EREBP1/EEADannot XX ID Os02g54160.1:EREBP1:EEADannot XX NA Os02g54160.1 XX DE Os02g54160.1 XX OS Oryza sativa XX BF 18317; BF 18318; XX P0 A C G T 01 100 0 0 0 A 02 0 0 100 0 G 03 0 100 0 0 C 04 50 50 0 0 m 05 0 0 100 0 G 06 0 50 50 0 s 07 0 100 0 0 C XX BS 68438; BS 68439; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=Os02g54160.1:EREBP1:EEADannot XX RN [1]; RX PUBMED: 12913152 RL Cheong YH, Moon BC, Kim JK, Kim CY, Kim MC, Kim IH, Park CY, Kim JC, Park BO, Koo SC, Yoon HW, Chung WS, Lim CO, Lee SY, Cho MJ. BWMK1, a rice mitogen-activated protein kinase, locates in the nucleus and mediates pathogenesis-related gene expression by activation of a transcription factor. Plant Physiol 132:1961-72 (2003). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GRF4_ORYSJ/GRF4/EEADannot XX ID GRF4_ORYSJ:GRF4:EEADannot XX NA GRF4_ORYSJ XX DE GRF4_ORYSJ XX OS Oryza sativa XX BF 18327; XX P0 A C G T 01 98 445 132 121 c 02 85 463 137 111 c 03 36 32 704 24 G 04 14 723 35 24 C 05 28 707 28 33 C 06 23 13 741 19 G 07 20 738 21 17 C 08 21 715 32 28 C 09 26 15 722 33 G 10 29 697 38 32 C 11 77 447 159 113 c 12 97 147 441 111 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GRF4_ORYSJ:GRF4:EEADannot XX RN [1]; RX PUBMED: 30111841 RL Li S, Tian Y, Wu K, Ye Y, Yu J, Zhang J, Liu Q, Hu M, Li H, Tong Y, Harberd NP, Fu X. Modulating plant growth-metabolism coordination for sustainable agriculture. Nature 560:595-600 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC IDEF1_ORYSJ/IDE/EEADannot XX ID IDEF1_ORYSJ:IDE:EEADannot XX NA IDEF1_ORYSJ XX DE IDEF1_ORYSJ XX OS Oryza sativa XX BF 5384; XX P0 A C G T 01 5 3 0 4 h 02 0 0 9 3 K 03 0 12 0 0 C 04 12 0 0 0 A 05 0 0 0 12 T 06 0 0 12 0 G 07 0 10 2 0 C 08 4 0 1 7 w 09 0 0 2 10 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=IDEF1_ORYSJ:IDE:EEADannot XX RN [1]; RX PUBMED: 18025467 RL Kobayashi T., Ogo Y., Itai R. N., Nakanishi H., Takahashi M., Mori S., Nishizawa N. K. The transcription factor IDEF1 regulates the response to and tolerance of iron deficiency in plants.. Proc. Natl. Acad. Sci. USA 104:19150-19155 (2007). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT5G61850.1/LEAFY/EEADannot XX ID AT5G61850.1:LEAFY:EEADannot XX NA AT5G61850.1 XX DE AT5G61850.1 XX OS Arabidopsis thaliana XX BF 9886; XX P0 A C G T 01 116 57 55 144 w 02 111 26 128 107 d 03 109 11 235 17 r 04 192 24 5 151 w 05 10 349 3 10 C 06 5 342 3 22 C 07 325 8 24 15 A 08 249 18 43 62 a 09 49 151 6 166 y 10 30 2 333 7 G 11 10 2 353 7 G 12 143 6 15 208 w 13 8 327 2 35 C 14 125 223 3 21 m 15 305 16 24 27 A 16 210 13 5 144 w 17 221 39 62 50 a 18 145 65 66 96 w 19 116 80 65 111 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT5G61850.1:LEAFY:EEADannot XX RN [1]; RX PUBMED: 21515819 RL Moyroud E, Minguet E.G, Ott F, Yant L, Posé D, Monniaux M, Blanchet S, Bastien O, Thévenon E, Weigel D, Schmid M, Parcy F. Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor. The Plant cell 23:1293-306 (2011). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT1G74650.1/MYB31/EEADannot XX ID AT1G74650.1:MYB31:EEADannot XX NA AT1G74650.1 XX DE AT1G74650.1 XX OS Arabidopsis thaliana XX BF 10125; XX P0 A C G T 01 50 50 0 0 m 02 0 50 0 50 y 03 100 0 0 0 A 04 100 0 0 0 A 05 0 100 0 0 C 06 0 100 0 0 C 07 100 0 0 0 A 08 0 100 0 0 C 09 0 100 0 0 C 10 50 0 0 50 w 11 50 50 0 0 m XX BS 68440; BS 68441; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT1G74650.1:MYB31:EEADannot XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MB3R3_ARATH/MYB3R3/EEADannot XX ID MB3R3_ARATH:MYB3R3:EEADannot XX NA MB3R3_ARATH XX DE MB3R3_ARATH XX OS Arabidopsis thaliana XX BF 13888; XX P0 A C G T 01 32 11 5 20 w 02 18 22 15 13 m 03 4 4 10 50 T 04 56 7 3 2 A 05 3 2 63 0 G 06 0 68 0 0 C 07 0 68 0 0 C 08 0 1 67 0 G 09 0 0 2 66 T 10 2 0 0 66 T 11 64 0 4 0 A 12 3 43 12 10 c 13 30 10 12 16 a 14 22 8 17 21 d XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MB3R3_ARATH:MYB3R3:EEADannot XX RN [1]; RX PUBMED: 26069325 RL Kobayashi K, Suzuki T, Iwata E, Nakamichi N, Suzuki T, Chen P, Ohtani M, Ishida T, Hosoya H, Müller S, Leviczky T, Pettkó-Szandtner A, Darula Z, Iwamoto A, Nomoto M, Tada Y, Higashiyama T, Demura T, Doonan JH, Hauser MT, Sugimoto K, Umeda M, Magyar Z, Bögre L, Ito M. Transcriptional repression by MYB3R proteins regulates plant organ growth. EMBO J 34:1992-2007 (2015). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AT3G12910.1/NAC/EEADannot XX ID AT3G12910.1:NAC:EEADannot XX NA AT3G12910.1 XX DE AT3G12910.1 XX OS Arabidopsis thaliana XX BF 10126; XX P0 A C G T 01 0 0 0 100 T 02 0 100 0 0 C 03 0 0 0 100 T 04 0 100 0 0 C 05 0 100 0 0 C 06 0 0 50 50 k 07 0 50 50 0 s 08 0 100 0 0 C 09 100 0 0 0 A 10 0 0 100 0 G 11 0 50 50 0 s XX BS 68442; BS 68443; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AT3G12910.1:NAC:EEADannot XX RN [1]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CONS_ARATH/NF_CO/EEADannot XX ID CONS_ARATH:NF_CO:EEADannot XX NA CONS_ARATH XX DE CONS_ARATH XX OS Arabidopsis thaliana XX BF 18316; XX P0 A C G T 01 45 18 21 16 a 02 45 15 22 18 a 03 8 68 8 16 C 04 14 77 5 4 C 05 70 3 12 15 A 06 3 66 15 16 c 07 56 13 13 18 a 08 47 19 14 20 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CONS_ARATH:NF_CO:EEADannot XX RN [1]; RX PUBMED: 28526714 RL Gnesutta N, Kumimoto RW, Swain S, Chiara M, Siriwardana C, Horner DS, Holt BF 3rd, Mantovani R. CONSTANS Imparts DNA Sequence Specificity to the Histone Fold NF-YB/NF-YC Dimer. Plant Cell 29:1516-1532 (2017). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC C3VMM2_ARATH/NGA1/EEADannot XX ID C3VMM2_ARATH:NGA1:EEADannot XX NA C3VMM2_ARATH XX DE C3VMM2_ARATH XX OS Arabidopsis thaliana XX BF 18328; XX P0 A C G T 01 0 1 0 0 C 02 1 0 0 0 A 03 0 1 0 0 C 04 0 0 0 1 T 05 0 0 0 1 T 06 0 0 1 0 G XX BS 68444; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=C3VMM2_ARATH:NGA1:EEADannot XX RN [1]; RX PUBMED: 30397148 RL Sato H, Takasaki H, Takahashi F, Suzuki T, Iuchi S, Mitsuda N, Ohme-Takagi M, Ikeda M, Seo M, Yamaguchi-Shinozaki K, Shinozaki K. Arabidopsis thaliana NGATHA1 transcription factor induces ABA biosynthesis by activating NCED3 gene during dehydration stress. Proc Natl Acad Sci U S A : (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B4FHZ3_MAIZE/O2DREME/EEADannot XX ID B4FHZ3_MAIZE:O2DREME:EEADannot XX NA B4FHZ3_MAIZE XX DE B4FHZ3_MAIZE XX OS Zea mays XX BF 18320; XX P0 A C G T 01 0 100 0 0 C 02 0 100 0 0 C 03 100 0 0 0 A 04 0 100 0 0 C 05 48 0 52 0 r 06 0 0 0 100 T 07 0 100 0 0 C 08 100 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B4FHZ3_MAIZE:O2DREME:EEADannot XX RN [1]; RX PUBMED: 30262552 RL Zhan J, Li G, Ryu CH, Ma C, Zhang S, Lloyd A, Hunter BG, Larkins BA, Drews GN, Wang X, Yadegari R. Opaque-2 Regulates a Complex Gene Network Associated with Cell Differentiation and Storage Functions of Maize Endosperm. Plant Cell 30:2425-2446 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC B4FHZ3_MAIZE/O2MEME/EEADannot XX ID B4FHZ3_MAIZE:O2MEME:EEADannot XX NA B4FHZ3_MAIZE XX DE B4FHZ3_MAIZE XX OS Zea mays XX BF 18320; XX P0 A C G T 01 0 100 0 0 C 02 0 100 0 0 C 03 71 0 2 27 W 04 0 51 0 49 y 05 39 6 55 0 r 06 0 0 0 100 T 07 0 100 0 0 C 08 100 0 0 0 A 09 0 35 0 65 y 10 0 82 18 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=B4FHZ3_MAIZE:O2MEME:EEADannot XX RN [1]; RX PUBMED: 30262552 RL Zhan J, Li G, Ryu CH, Ma C, Zhang S, Lloyd A, Hunter BG, Larkins BA, Drews GN, Wang X, Yadegari R. Opaque-2 Regulates a Complex Gene Network Associated with Cell Differentiation and Storage Functions of Maize Endosperm. Plant Cell 30:2425-2446 (2018). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHE1_ARATH/PHE1MADS/EEADannot XX ID PHE1_ARATH:PHE1MADS:EEADannot XX NA PHE1_ARATH XX DE PHE1_ARATH XX OS Arabidopsis thaliana XX BF 18321; XX P0 A C G T 01 10 72 7 11 C 02 7 69 2 22 C 03 71 3 9 17 A 04 36 6 13 45 w 05 90 2 4 4 A 06 82 3 2 13 A 07 74 2 4 20 A 08 20 6 6 68 T 09 35 2 62 1 r 10 10 10 72 8 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHE1_ARATH:PHE1MADS:EEADannot XX RN [1]; RX PUBMED: 31789592 RL Batista RA, Moreno-Romero J, Qiu Y, van Boven J, Santos-González J, Figueiredo DD, Köhler C. The MADS-box transcription factor PHERES1 controls imprinting in the endosperm by binding to domesticated transposons. Elife : (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PHE1_ARATH/PHE1SVP/EEADannot XX ID PHE1_ARATH:PHE1SVP:EEADannot XX NA PHE1_ARATH XX DE PHE1_ARATH XX OS Arabidopsis thaliana XX BF 18321; XX P0 A C G T 01 10 4 0 86 T 02 0 0 0 100 T 03 39 13 0 48 w 04 7 92 0 1 C 05 0 100 0 0 C 06 58 12 0 30 w 07 41 0 0 59 w 08 55 12 0 33 w 09 32 0 0 68 w 10 40 0 14 46 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PHE1_ARATH:PHE1SVP:EEADannot XX RN [1]; RX PUBMED: 31789592 RL Batista RA, Moreno-Romero J, Qiu Y, van Boven J, Santos-González J, Figueiredo DD, Köhler C. The MADS-box transcription factor PHERES1 controls imprinting in the endosperm by binding to domesticated transposons. Elife : (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC StCONSTANSlike1/StCONSTANSlike1/EEADannot XX ID StCONSTANSlike1:StCONSTANSlike1:EEADannot XX NA StCONSTANSlike1 XX DE StCONSTANSlike1 XX OS Solanum tuberosum XX BF 18322; XX P0 A C G T 01 0 0 1 5 T 02 0 0 5 1 G 03 0 0 0 6 T 04 0 0 6 0 G 05 0 0 5 1 G 06 0 0 1 5 T 07 0 1 5 0 G XX BS 68447; BS 68448; BS 68449; BS 68450; BS 68451; BS 68452; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=StCONSTANSlike1:StCONSTANSlike1:EEADannot XX RN [1]; RX PUBMED: 26972319 RL Abelenda JA, Cruz-Oró E, Franco-Zorrilla JM, Prat S. Potato StCONSTANS-like1 Suppresses Storage Organ Formation by Directly Activating the FT-like StSP5G Repressor. Curr Biol 26:872-81 (2016). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A1D6L1J8_MAIZE/TB1/EEADannot XX ID A0A1D6L1J8_MAIZE:TB1:EEADannot XX NA A0A1D6L1J8_MAIZE XX DE A0A1D6L1J8_MAIZE XX OS Zea mays XX BF 18323; XX P0 A C G T 01 0 0 100 0 G 02 0 0 100 0 G 03 0 0 100 0 G 04 15 18 52 15 g 05 0 100 0 0 C 06 0 100 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A1D6L1J8_MAIZE:TB1:EEADannot XX RN [1]; RX PUBMED: 31444327 RL Dong Z, Xiao Y, Govindarajulu R, Feil R, Siddoway ML, Nielsen T, Lunn JE, Hawkins J, Whipple C, Chuck G. The regulatory landscape of a core maize domestication module controlling bud dormancy and growth repression. Nat Commun 10:3810 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AY750993/VRN1/EEADannot XX ID AY750993:VRN1:EEADannot XX NA AY750993 XX DE AY750993 XX OS Hordeum vulgare cv Strider XX BF 18324; XX P0 A C G T 01 19 71 7 3 C 02 10 71 7 12 C 03 57 17 14 12 a 04 56 6 31 7 r 05 94 2 4 0 A 06 84 1 3 12 A 07 79 7 7 7 A 08 58 3 9 30 w 09 24 0 76 0 G 10 15 0 85 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AY750993:VRN1:EEADannot XX RN [1]; RX PUBMED: 25562483 RL Deng W, Casao Mc, Wang P, Sato K, Hayes PM, Jean Finnegan E, Trvaskis B (2015) Direct links between the vernalization response and other key traits of cereal crops. Nat Comm 6:5882 RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC A0A060D1R6_MAIZE/ZmNAC128/EEADannot XX ID A0A060D1R6_MAIZE:ZmNAC128:EEADannot XX NA A0A060D1R6_MAIZE XX DE A0A060D1R6_MAIZE XX OS Zea mays XX BF 18325; XX P0 A C G T 01 2 0 0 0 A 02 0 2 0 0 C 03 0 0 2 0 G 04 0 2 0 0 C 05 2 0 0 0 A 06 2 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=A0A060D1R6_MAIZE:ZmNAC128:EEADannot XX RN [1]; RX PUBMED: 31110006 RL Zhang Z, Dong J, Ji C, Wu Y, Messing J. NAC-type transcription factors regulate accumulation of starch and protein in maize seeds. Proc Natl Acad Sci U S A 116:11223-11228 (2019). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL3/AGL3/Athamap XX ID AGL3:AGL3:Athamap XX NA AGL3 XX DE AGL3 XX OS Arabidopsis thaliana XX BF 3866; XX P0 A C G T 01 22 29 34 10 s 02 16 9 29 41 k 03 25 8 4 58 w 04 27 16 13 39 w 05 0 92 0 3 C 06 0 79 0 16 C 07 82 1 2 10 A 08 40 4 3 48 w 09 56 0 1 38 w 10 35 0 0 60 w 11 65 1 4 25 W 12 25 4 3 63 w 13 64 0 28 3 r 14 0 0 92 3 G 15 33 14 15 33 w 16 52 5 7 31 w 17 45 23 13 14 a 18 21 24 26 24 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL3:AGL3:Athamap XX CC sequences selected with recombinant AGL3 from a pool of double-stranded oligonucleotides containing a core of 95 random nucleotides; 5 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 7632923 RL Huang H., Tudor M., Weiss C. A., Hu Y., Ma H. The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein. Plant Mol. Biol. 28:549-567 (1995). RN [2]; RX PUBMED: 8597661 RL Huang H., Tudor M., Su T., Zhang Y., Hu Y., Ma H. DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation.. Plant Cell 8:81-94 (1996). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB-9/ATHB9/Athamap XX ID ATHB-9:ATHB9:Athamap XX NA ATHB-9 XX DE homeobox transcription factor belonging to the small family of HD-ZIPIII proteins XX OS Arabidopsis thaliana XX BF 1707; XX P0 A C G T 01 4 2 1 2 a 02 5 3 3 3 a 03 5 4 2 5 h 04 3 8 2 5 y 05 0 1 25 0 G 06 0 6 0 20 T 07 25 0 1 0 A 08 26 0 0 0 A 09 0 0 0 26 T 10 0 0 26 0 G 11 26 0 0 0 A 12 0 0 0 26 T 13 0 0 3 23 T 14 17 0 9 0 r 15 0 25 1 0 C 16 5 1 4 7 w 17 2 6 0 4 y 18 0 3 4 3 b 19 0 5 3 0 s XX BS 54680; BS 54681; BS 54682; BS 54683; BS 54684; BS 54685; BS 54686; BS 54687; BS 54688; BS 54689; BS 54690; BS 54691; BS 54692; BS 54693; BS 54694; BS 54695; BS 54696; BS 54697; BS 54698; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB-9:ATHB9:Athamap XX CC sequences selected with recombinant ATHB-9 from a pool of double-stranded oligonucleotides containing a core of 15 random nucleotides; 7 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 9747806 RL Sessa G., Steindler C., Morelli G., Ruberti I. The Arabidopsis Athb-8, -9 and -14 genes are members of a small gene family coding for highly related HD-ZIP proteins. Plant Mol. Biol. 38:609-622 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIF3/PIF3/1)(Athamap XX ID PIF3:PIF3:1)(Athamap XX NA PIF3 XX DE acts in phytochrome signalling pathways XX OS Arabidopsis thaliana XX BF 2964; XX P0 A C G T 01 2 5 15 5 g 02 5 1 10 11 k 03 11 2 12 2 r 04 6 0 17 4 g 05 5 3 17 2 g 06 11 11 5 0 m 07 0 27 0 0 C 08 27 0 0 0 A 09 0 27 0 0 C 10 0 0 27 0 G 11 0 0 0 27 T 12 0 0 27 0 G 13 11 2 13 1 r 14 9 12 6 0 m 15 3 9 13 2 s 16 11 6 0 10 w 17 4 19 4 0 C 18 4 2 9 12 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIF3:PIF3:1)(Athamap XX RN [1]; RX PUBMED: 10797009 RL Martinez-Garcia J. F., Huq E., Quail P. H. Direct targeting of light signals to a promoter element-bound transcription factor. Science 288:859-863 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIF3/PIF3/2)(Athamap XX ID PIF3:PIF3:2)(Athamap XX NA PIF3 XX DE acts in phytochrome signalling pathways XX OS Arabidopsis thaliana XX BF 2964; XX P0 A C G T 01 15 2 9 6 r 02 9 4 10 9 d 03 10 2 13 7 r 04 8 11 13 0 v 05 1 26 5 0 C 06 0 32 0 0 C 07 32 0 0 0 A 08 0 32 0 0 C 09 0 0 32 0 G 10 0 0 0 32 T 11 0 0 32 0 G 12 0 0 32 0 G 13 9 10 11 2 v 14 15 15 0 2 m 15 11 13 8 0 v 16 7 8 11 6 s 17 4 11 6 11 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIF3:PIF3:2)(Athamap XX RN [1]; RX PUBMED: 10797009 RL Martinez-Garcia J. F., Huq E., Quail P. H. Direct targeting of light signals to a promoter element-bound transcription factor. Science 288:859-863 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TEIL/TEIL/Athamap XX ID TEIL:TEIL:Athamap XX NA TEIL XX DE TEIL XX OS Nicotiana tabacum XX BF 2036; XX P0 A C G T 01 70 6 6 5 A 02 1 21 0 65 T 03 0 1 86 0 G 04 31 12 3 41 w 05 86 0 1 0 A 06 1 49 2 35 y 07 5 61 13 8 C 08 3 8 4 72 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TEIL:TEIL:Athamap XX CC sequences selected with recombinant TEIL from a pool of double-stranded oligonucleotides containing a core of 18 random nucleotides; 4 rounds of selection and amplification XX RN [1]; RX PUBMED: 10648789 RL Kosugi S., Ohashi Y. Cloning and DNA-binding properties of a tobacco Ethylene-Insensitive3 (EIN3) homolog. Nucleic Acids Res. 28:960-967 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF1/ABF1/Athamap XX ID ABF1:ABF1:Athamap XX NA ABF1 XX DE ABF1 XX OS Arabidopsis thaliana XX BF 7488; XX P0 A C G T 01 20 0 0 0 A 02 0 20 0 0 C 03 20 0 0 0 A 04 0 20 0 0 C 05 0 0 20 0 G 06 0 0 0 20 T 07 0 0 20 0 G 08 0 0 17 3 G 09 1 19 0 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF1:ABF1:Athamap XX RN [1]; RX PUBMED: 10636868 RL Choi H., Hong J., Ha J., Kang J., Kim S. Y. ABFs, a family of ABA-responsive element binding factors. J. Biol. Chem. 275:1723-1730 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI3/ABI3/Athamap XX ID ABI3:ABI3:Athamap XX NA ABI3 XX DE ABI3 XX OS Arabidopsis thaliana XX BF 7489; XX P0 A C G T 01 0 1 2 0 s 02 0 0 1 2 k 03 0 1 2 0 s 04 0 3 0 0 C 05 3 0 0 0 A 06 0 0 0 3 T 07 0 0 3 0 G 08 0 3 0 0 C 09 3 0 0 0 A XX BS 21241; BS 21242; BS 21243; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI3:ABI3:Athamap XX RN [1]; RX PUBMED: 10758492 RL Reidt W, Wohlfarth T, Ellerstrom M, Czihal A, Tewes A, Ezcurra I, Rask L, Baumlein H. 2000. Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product. Plant J. 21:401-8. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI4/ABI4/Athamap XX ID ABI4:ABI4:Athamap XX NA ABI4 XX DE ABI4 XX OS Zea mays XX BF 2312; XX P0 A C G T 01 0 20 0 1 C 02 12 0 9 0 r 03 0 21 0 0 C 04 0 21 0 0 C 05 1 0 20 0 G 06 0 21 0 0 C 07 1 20 0 0 C 08 1 14 5 1 c 09 2 13 4 2 c 10 4 7 6 4 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI4:ABI4:Athamap XX RN [1]; RX PUBMED: 12368505 RL Niu X., Helentjaris T., Bate N. J. Maize ABI4 binds coupling element1 in abscisic acid and sugar response genes.. Plant Cell 14:2565-2575 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI4(2)/ABI4/2)(Athamap XX ID ABI4(2):ABI4:2)(Athamap XX NA ABI4(2) XX DE ABI4(2) XX OS Zea mays XX BF 2312; XX P0 A C G T 01 0 31 0 0 C 02 0 0 31 0 G 03 0 0 31 0 G 04 0 3 0 28 T 05 0 0 31 0 G 06 0 28 3 0 C 07 4 10 6 11 y 08 2 10 8 11 b 09 1 18 3 9 y 10 0 20 2 9 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI4(2):ABI4:2)(Athamap XX RN [1]; RX PUBMED: 12368505 RL Niu X., Helentjaris T., Bate N. J. Maize ABI4 binds coupling element1 in abscisic acid and sugar response genes.. Plant Cell 14:2565-2575 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI5/ABI5/Athamap XX ID ABI5:ABI5:Athamap XX NA ABI5 XX DE ABI5 XX OS Arabidopsis thaliana XX BF 3091; XX P0 A C G T 01 0 0 3 1 K 02 3 1 0 0 M 03 0 2 0 2 y 04 4 0 0 0 A 05 0 4 0 0 C 06 0 0 4 0 G 07 0 0 0 4 T 08 0 1 2 1 b 09 1 0 3 0 R XX BS 21244; BS 21245; BS 21246; BS 21247; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI5:ABI5:Athamap XX RN [1]; RX PUBMED: 12084834 RL Bensmihen S., Rippa S., Lambert G., Jublot D., Pautot V., Granier F., Giraudat J., Parcy F. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis.. Plant Cell 14:1391-1403 (2002). RN [2]; RX PUBMED: 12000684 RL Carles C, Bies-Etheve N, Aspart L, Leon-Kloosterziel KM, Koornneef M, Echeverria M, Delseny M. 2002. Regulation of Arabidopsis thaliana Em genes: role of ABI5. : Plant J. 30:373-83. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANT/ANT/Athamap XX ID ANT:ANT:Athamap XX NA ANT XX DE ANT XX OS Arabidopsis thaliana XX BF 1275; XX P0 A C G T 01 8 0 24 2 G 02 0 32 0 2 C 03 31 0 2 1 A 04 0 34 0 0 C 05 21 0 13 0 r 06 8 6 15 5 g 07 15 1 1 17 w 08 0 3 0 31 T 09 4 25 0 5 C 10 0 34 0 0 C 11 0 33 0 1 C 12 9 11 13 1 v 13 34 0 0 0 A 14 7 1 16 10 k 15 3 1 29 1 G 16 2 10 3 19 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANT:ANT:Athamap XX RN [1]; RX PUBMED: 11058102 RL Nole-Wilson S., Krizek B. A. DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA. Nucleic Acids Res. 28:4076-4082 (2000). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARF1/ARF1/Athamap XX ID ARF1:ARF1:Athamap XX NA ARF1 XX DE ARF1 XX OS Arabidopsis thaliana XX BF 2866; XX P0 A C G T 01 0 10 0 0 C 02 1 0 0 9 T 03 0 0 0 10 T 04 0 0 10 0 G 05 0 0 0 10 T 06 0 10 0 0 C 07 1 1 1 7 T 08 1 9 0 0 C 09 1 9 0 0 C 10 1 9 0 0 C 11 8 1 1 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARF1:ARF1:Athamap XX RN [1]; RX PUBMED: 9188533 RL Ulmasov T., Hagen G., Guilfoyle T. J. ARF1, a transcription factor that binds to auxin response elements. Science 276:1865-1868 (1997). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR1/ARR1/Athamap XX ID ARR1:ARR1:Athamap XX NA ARR1 XX DE ARR1 XX OS Arabidopsis thaliana XX BF 7490; XX P0 A C G T 01 0 0 0 2 T 02 0 2 0 0 C 03 0 0 0 2 T 04 2 0 0 0 A 05 0.30 0.20 1.20 0.30 g 06 0 0 2 0 G 07 2 0 0 0 A 08 0 0 0 2 T 09 0.30 0.20 0.20 1.30 t 10 0 0 2 0 G 11 0 0 0 2 T 12 0 2 0 0 C 13 0 0 0 2 T XX BS 21248; BS 21249; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR1:ARR1:Athamap XX RN [1]; RX PUBMED: 11135105 RL Sakai H, Aoyama T, Oka A. 2000. Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators. Plant J. 24:703-11. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR10/ARR10/Athamap XX ID ARR10:ARR10:Athamap XX NA ARR10 XX DE ARR10 XX OS Arabidopsis thaliana XX BF 4026; XX P0 A C G T 01 3 1 10 0 G 02 3 5 5 1 s 03 1 1 6 6 k 04 6 1 2 5 w 05 14 0 0 0 A 06 0 0 14 0 G 07 14 0 0 0 A 08 0 0 0 14 T 09 4 6 0 4 h 10 0 8 0 6 y 11 0 0 8 6 k 12 2 7 3 2 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR10:ARR10:Athamap XX RN [1]; RX PUBMED: 12215502 RL Hosoda K., Imamura A., Katoh E., Hatta T., Tachiki M., Yamada H., Mizuno T., Yamazaki T. Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators.. Plant Cell 14:2015-2029 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR2/ARR2/Athamap XX ID ARR2:ARR2:Athamap XX NA ARR2 XX DE ARR2 XX OS Arabidopsis thaliana XX BF 7491; XX P0 A C G T 01 0 0 0 3 T 02 0 2 0 1 y 03 0 0 0 3 T 04 2 0 0 1 w 05 0.31 0.19 1.19 1.31 k 06 0 0 3 0 G 07 3 0 0 0 A 08 0 0 0 3 T 09 0.31 0.19 0.19 2.31 T 10 0 0 3 0 G 11 0 0 0 3 T 12 0 2 1 0 s XX BS 21248; BS 21249; BS 21250; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR2:ARR2:Athamap XX RN [1]; RX PUBMED: 11135105 RL Sakai H, Aoyama T, Oka A. 2000. Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators. Plant J. 24:703-11. RN [2]; RX PUBMED: 11370868 RL Lohrmann J, Sweere U, Zabaleta E, Baurle I, Keitel C, Kozma-Bognar L, Brennicke A, Schafer E, Kudla J, Harter K. 2001. The response regulator ARR2: a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Mol Genet Genomics. 265:2-13. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB1/ATHB1/Athamap XX ID ATHB1:ATHB1:Athamap XX NA ATHB1 XX DE ATHB1 XX OS Arabidopsis thaliana XX BF 3981; XX P0 A C G T 01 3 13 4 3 c 02 22 1 0 1 A 03 25 0 0 0 A 04 0 0 0 25 T 05 0 5 0 20 T 06 25 0 0 0 A 07 0 0 0 25 T 08 0 0 0 25 T 09 3 1 12 0 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB1:ATHB1:Athamap XX RN [1]; RX PUBMED: 8253077 RL Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB5/ATHB5/Athamap XX ID ATHB5:ATHB5:Athamap XX NA ATHB5 XX DE ATHB5 XX OS Arabidopsis thaliana XX BF 3982; XX P0 A C G T 01 0 9 12 9 b 02 4 9 17 4 s 03 2 12 8 14 y 04 2 17 10 7 s 05 0 32 4 3 C 06 32 6 0 1 A 07 39 0 0 0 A 08 0 0 0 39 T 09 2 8 7 22 t 10 39 0 0 0 A 11 0 0 0 39 T 12 0 0 0 39 T 13 0 0 38 1 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB5:ATHB5:Athamap XX RN [1]; RX PUBMED: 11247607 RL Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtLEC2/AtLEC2/Athamap XX ID AtLEC2:AtLEC2:Athamap XX NA AtLEC2 XX DE AtLEC2 XX OS Arabidopsis thaliana XX BF 7492; XX P0 A C G T 01 2 0 3 4 k 02 2 4 0 3 y 03 0 9 0 0 C 04 9 0 0 0 A 05 0 0 0 9 T 06 0 0 9 0 G 07 0 9 0 0 C 08 9 0 0 0 A 09 5 1 1 1 a 10 5 1 1 1 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtLEC2:AtLEC2:Athamap XX RN [1]; RX PUBMED: 16492731 RL Braybrook SA, Stone SL, Park S, Bui AQ, Le BH, Fischer RL, Goldberg RB, Harada JJ. 2006. Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis. Proc Natl Acad Sci U S A 103: 3468-73. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtSPL3/AtSPL3/Athamap XX ID AtSPL3:AtSPL3:Athamap XX NA AtSPL3 XX DE AtSPL3 XX OS Arabidopsis thaliana XX BF 7495; BF 7519; XX P0 A C G T 01 13 3 9 9 d 02 8 2 8 16 t 03 14 0 6 14 w 04 10 1 13 10 d 05 13 15 1 5 m 06 2 29 2 1 C 07 0 0 34 0 G 08 0 0 0 34 T 09 34 0 0 0 A 10 0 34 0 0 C 11 10 7 7 10 w 12 13 6 2 13 w 13 8 9 4 13 y 14 10 8 2 14 w 15 12 7 0 15 w 16 9 12 3 10 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtSPL3:AtSPL3:Athamap XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 16095614 RL Birkenbihl RP, Jach G, Saedler H, Huijser P. 2005. Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains. J Mol Biol 352: 585-96. RN [2]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtSPL8/AtSPL8/Athamap XX ID AtSPL8:AtSPL8:Athamap XX NA AtSPL8 XX DE AtSPL8 XX OS Arabidopsis thaliana XX BF 7496; XX P0 A C G T 01 11 1 4 14 w 02 11 0 6 13 w 03 9 4 6 11 w 04 10 1 4 15 w 05 10 6 4 10 w 06 3 10 2 15 y 07 0 0 30 0 G 08 0 0 0 30 T 09 30 0 0 0 A 10 0 30 0 0 C 11 6 12 1 11 y 12 10 7 0 13 w 13 5 8 1 16 y 14 13 5 0 12 w 15 10 3 0 17 w 16 11 6 0 13 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtSPL8:AtSPL8:Athamap XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 16095614 RL Birkenbihl RP, Jach G, Saedler H, Huijser P. 2005. Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains. J Mol Biol 352: 585-96. RN [2]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BZIP12/BZIP12/Athamap XX ID BZIP12:BZIP12:Athamap XX NA BZIP12 XX DE BZIP12 XX OS Arabidopsis thaliana XX BF 7497; XX P0 A C G T 01 0 0 0 2 T 02 0 2 0 0 C 03 1 1 0 0 m 04 2 0 0 0 A 05 0 2 0 0 C 06 0 0 2 0 G 07 0 0 0 2 T 08 1 0 1 0 r 09 0 0 1 1 k 10 0 2 0 0 C 11 2 0 0 0 A XX BS 21244; BS 21245; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BZIP12:BZIP12:Athamap XX RN [1]; RX PUBMED: 12084834 RL Bensmihen S., Rippa S., Lambert G., Jublot D., Pautot V., Granier F., Giraudat J., Parcy F. The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis.. Plant Cell 14:1391-1403 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB1A/DREB1A/Athamap XX ID DREB1A:DREB1A:Athamap XX NA DREB1A XX DE DREB1A XX OS Arabidopsis thaliana XX BF 7498; XX P0 A C G T 01 0 1 1 8 T 02 9 1 0 0 A 03 1 7 0 2 C 04 1 0 2 7 T 05 6 0 4 0 r 06 0 10 0 0 C 07 0 10 0 0 C 08 0 0 10 0 G 09 10 0 0 0 A 10 0 10 0 0 C 11 8 2 0 0 A 12 1 2 1 6 t 13 1 1 8 0 G 14 7 1 1 1 A XX BS 7170; BS 21251; BS 21252; BS 21253; BS 21254; BS 21255; BS 21256; BS 21257; BS 21258; BS 21259; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB1A:DREB1A:Athamap XX RN [1]; RX PUBMED: 15165189 RL Maruyama K, Sakuma Y, Kasuga M, Ito Y, Seki M, Goda H, Shimada Y, Yoshida S, Shinozaki K, Yamaguchi-Shinozaki K. 2004. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. : Plant J. 38:982-93. RN [2]; RX PUBMED: 12694590 RL Narusaka Y, Nakashima K, Shinwari ZK, Sakuma Y, Furihata T, Abe H, Narusaka M, Shinozaki K, Yamaguchi-Shinozaki K. 2003. Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses. Plant J. 34:137-48. RN [3]; RX PUBMED: 9881163 RL Gilmour SJ, Zarka DG, Stockinger EJ, Salazar MP, Houghton JM, Thomashow MF. 1998. Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant J. 16:433-42. RN [4]; RX PUBMED: 16617101 RL Sakuma Y, Maruyama K, Osakabe Y, Qin F, Seki M, Shinozaki K, Yamaguchi-Shinozaki K. 2006. Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression. Plant Cell 18: 1292-309. RN [5]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB1B/DREB1B/Athamap XX ID DREB1B:DREB1B:Athamap XX NA DREB1B XX DE DREB1B XX OS Arabidopsis thaliana XX BF 7499; BF 7500; XX P0 A C G T 01 3 0 0 0 A 02 0 1 0 2 y 03 0 0 2 1 k 04 1 0 2 0 r 05 0 3 0 0 C 06 0 3 0 0 C 07 0 0 3 0 G 08 3 0 0 0 A 09 0 3 0 0 C 10 1 2 0 0 m 11 0 0 0 3 T XX BS 21253; BS 21260; BS 21254; BS 21255; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB1B:DREB1B:Athamap XX RN [1]; RX PUBMED: 9881163 RL Gilmour SJ, Zarka DG, Stockinger EJ, Salazar MP, Houghton JM, Thomashow MF. 1998. Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant J. 16:433-42. RN [2]; RX PUBMED: 9023378 RL Stockinger EJ, Gilmour SJ, Thomashow MF. 1997. Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit. Proc Natl Acad Sci U S A. 94:1035-40. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB2A/DREB2A/Athamap XX ID DREB2A:DREB2A:Athamap XX NA DREB2A XX DE DREB2A XX OS Arabidopsis thaliana XX BF 3092; XX P0 A C G T 01 0 0 0 7 T 02 6 1 0 0 A 03 1 6 0 0 C 04 1 0 0 6 T 05 5 0 2 0 R 06 0 7 0 0 C 07 0 7 0 0 C 08 0 0 7 0 G 09 7 0 0 0 A 10 0 7 0 0 C 11 7 0 0 0 A 12 1 2 1 3 y 13 1 0 6 0 G 14 6 0 1 0 A XX BS 21261; BS 21252; BS 21256; BS 21257; BS 21258; BS 21259; BS 21251; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB2A:DREB2A:Athamap XX RN [1]; RX PUBMED: 12694590 RL Narusaka Y, Nakashima K, Shinwari ZK, Sakuma Y, Furihata T, Abe H, Narusaka M, Shinozaki K, Yamaguchi-Shinozaki K. 2003. Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses. Plant J. 34:137-48. RN [2]; RX PUBMED: 16617101 RL Sakuma Y, Maruyama K, Osakabe Y, Qin F, Seki M, Shinozaki K, Yamaguchi-Shinozaki K. 2006. Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression. Plant Cell 18: 1292-309. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2Fa/E2Fa/Athamap XX ID E2Fa:E2Fa:Athamap XX NA E2Fa XX DE E2Fa XX OS Arabidopsis thaliana XX BF 7501; BF 7504; XX P0 A C G T 01 1 0 0 2 w 02 0 0 0 3 T 03 0 0 0 3 T 04 0 3 0 0 C 05 0 3 0 0 C 06 0 3 0 0 C 07 0 0 3 0 G 08 0 3 0 0 C XX BS 21262; BS 21263; BS 21264; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2Fa:E2Fa:Athamap XX RN [1]; RX PUBMED: 11786543 RL Mariconti L, Pellegrini B, Cantoni R, Stevens R, Bergounioux C, Cella R, Albani D. 2002. The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. J Biol Chem. 277:9911-9. RN [2]; RX PUBMED: 12468739 RL Egelkrout EM, Mariconti L, Settlage SB, Cella R, Robertson D, Hanley-Bowdoin L. 2002. Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development. Plant Cell. 14:3225-36. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2Fb/E2Fb/Athamap XX ID E2Fb:E2Fb:Athamap XX NA E2Fb XX DE E2Fb XX OS Arabidopsis thaliana XX BF 7502; XX P0 A C G T 01 1 0 0 3 W 02 0 0 0 4 T 03 0 0 0 4 T 04 0 4 0 0 C 05 0 4 0 0 C 06 0 4 0 0 C 07 0 0 4 0 G 08 0 4 0 0 C XX BS 6028; BS 21265; BS 21262; BS 21264; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2Fb:E2Fb:Athamap XX RN [1]; RX PUBMED: 11669580 RL de Jager S. M., Menges M., Bauer U. M., Murra J. A. Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activities.. Plant Mol. Biol. 47:555-568 (2001). RN [2]; RX PUBMED: 11786543 RL Mariconti L, Pellegrini B, Cantoni R, Stevens R, Bergounioux C, Cella R, Albani D. 2002. The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. J Biol Chem. 277:9911-9. RN [3]; RX PUBMED: 12468739 RL Egelkrout EM, Mariconti L, Settlage SB, Cella R, Robertson D, Hanley-Bowdoin L. 2002. Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development. Plant Cell. 14:3225-36. RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC E2Fc/E2Fc/Athamap XX ID E2Fc:E2Fc:Athamap XX NA E2Fc XX DE E2Fc XX OS Arabidopsis thaliana XX BF 7503; BF 3888; XX P0 A C G T 01 1 0 0 4 T 02 1 0 0 4 T 03 0 5 0 0 C 04 0 4 1 0 C 05 0 5 0 0 C 06 0 0 5 0 G 07 0 5 0 0 C 08 0 3 1 1 c 09 3 2 0 0 m 10 3 0 0 2 w 11 3 0 0 2 w XX BS 21262; BS 21263; BS 21264; BS 21266; BS 21267; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=E2Fc:E2Fc:Athamap XX RN [1]; RX PUBMED: 11786543 RL Mariconti L, Pellegrini B, Cantoni R, Stevens R, Bergounioux C, Cella R, Albani D. 2002. The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. J Biol Chem. 277:9911-9. RN [2]; RX PUBMED: 12468739 RL Egelkrout EM, Mariconti L, Settlage SB, Cella R, Robertson D, Hanley-Bowdoin L. 2002. Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development. Plant Cell. 14:3225-36. RN [3]; RX PUBMED: 12089153 RL Stevens R, Mariconti L, Rossignol P, Perennes C, Cella R, Bergounioux C. 2002. Two E2F sites in the Arabidopsis MCM3 promoter have different roles in cell cycle activation and meristematic expression. J Biol Chem. 277:32978-84. RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF1/ERF1/Athamap XX ID ERF1:ERF1:Athamap XX NA ERF1 XX DE ERF1 XX OS Arabidopsis thaliana XX BF 7505; BF 2867; BF 1971; XX P0 A C G T 01 2 0 0 0 A 02 0 0 2 0 G 03 0 2 0 0 C 04 0 2 0 0 C 05 0 0 2 0 G 06 0 2 0 0 C 07 0 2 0 0 C 08 2 0 0 0 A XX BS 21268; BS 21269; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF1:ERF1:Athamap XX RN [1]; RX PUBMED: 10715325 RL Fujimoto SY, Ohta M, Usui A, Shinshi H, Ohme-Takagi M. 2000. Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Plant Cell. 12:393-404. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF3/ERF3/Athamap XX ID ERF3:ERF3:Athamap XX NA ERF3 XX DE ERF3 XX OS Arabidopsis thaliana XX BF 7506; XX P0 A C G T 01 1 0 0 4 T 02 4 1 0 0 A 03 5 0 0 0 A 04 0 0 4 1 G 05 4 0 0 1 A 06 0 0 5 0 G 07 0 5 0 0 C 08 0 4 0 1 C 09 0 0 5 0 G 10 0 4 0 1 C 11 0 5 0 0 C 12 5 0 0 0 A 13 0 4 0 1 C 14 0 0 0 5 T XX BS 21268; BS 21270; BS 21271; BS 21272; BS 21269; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF3:ERF3:Athamap XX RN [1]; RX PUBMED: 10715325 RL Fujimoto SY, Ohta M, Usui A, Shinshi H, Ohme-Takagi M. 2000. Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Plant Cell. 12:393-404. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF4/ERF4/Athamap XX ID ERF4:ERF4:Athamap XX NA ERF4 XX DE ERF4 XX OS Arabidopsis thaliana XX BF 7507; XX P0 A C G T 01 1 0 0 5 T 02 5 1 0 0 A 03 6 0 0 0 A 04 0 0 5 1 G 05 5 0 0 1 A 06 0 0 6 0 G 07 0 6 0 0 C 08 0 5 0 1 C 09 0 0 6 0 G 10 0 5 0 1 C 11 0 5 0 1 C 12 6 0 0 0 A 13 0 5 0 1 C 14 0 0 0 6 T XX BS 21268; BS 21270; BS 21271; BS 21272; BS 21273; BS 21269; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF4:ERF4:Athamap XX RN [1]; RX PUBMED: 10715325 RL Fujimoto SY, Ohta M, Usui A, Shinshi H, Ohme-Takagi M. 2000. Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Plant Cell. 12:393-404. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FUS3/FUS3/Athamap XX ID FUS3:FUS3:Athamap XX NA FUS3 XX DE FUS3 XX OS Arabidopsis thaliana XX BF 7508; XX P0 A C G T 01 0 1 3 0 S 02 0 4 0 0 C 03 4 0 0 0 A 04 0 0 0 4 T 05 0 0 4 0 G 06 0 4 0 0 C 07 4 0 0 0 A 08 1 0 0 3 W XX BS 21274; BS 21241; BS 21242; BS 21243; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FUS3:FUS3:Athamap XX RN [1]; RX PUBMED: 10758492 RL Reidt W, Wohlfarth T, Ellerstrom M, Czihal A, Tewes A, Ezcurra I, Rask L, Baumlein H. 2000. Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product. Plant J. 21:401-8. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GAMYB/GAMYB/Athamap XX ID GAMYB:GAMYB:Athamap XX NA GAMYB XX DE GAMYB XX OS Hordeum vulgare XX BF 2728; XX P0 A C G T 01 0 16 0 9 y 02 25 0 0 0 A 03 25 0 0 0 A 04 0 25 0 0 C 05 3 13 7 2 s 06 5 3 17 0 G 07 10 10 1 4 m 08 5 18 2 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GAMYB:GAMYB:Athamap XX RN [1]; RX PUBMED: 10069063 RL Gubler F., Raventos D., Keys M., Watts R., Mundy J., Jacobsen J. V. Target genes and regulatory domains of the GAMYB transcriptional activator in cereal aleurone. Plant J. 17:1-9 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA1/GATA1/Athamap XX ID GATA1:GATA1:Athamap XX NA GATA1 XX DE GATA1 XX OS Arabidopsis thaliana XX BF 7509; XX P0 A C G T 01 2 1 6 0 g 02 0 2 3 4 k 03 2 4 2 1 c 04 0 0 5 4 k 05 6 0 0 3 w 06 3 0 0 6 w 07 0 4 0 5 y 08 0 6 1 2 c 09 8 0 1 0 A 10 1 0 0 8 T XX BS 21275; BS 21276; BS 21277; BS 21278; BS 21279; BS 21280; BS 21281; BS 21282; BS 21283; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA1:GATA1:Athamap XX RN [1]; RX PUBMED: 12139008 RL Teakle GR, Manfield IW, Graham JF, Gilmartin PM. 2002. Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics. Plant Mol Biol. 50:43-57. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA2/GATA2/Athamap XX ID GATA2:GATA2:Athamap XX NA GATA2 XX DE GATA2 XX OS Arabidopsis thaliana XX BF 7510; BF 7511; BF 7512; XX P0 A C G T 01 5 0 0 0 A 02 0 0 1 4 T 03 1 1 3 0 g 04 4 0 1 0 A 05 3 0 0 2 w 06 2 0 0 3 w 07 2 3 0 0 m 08 0 2 2 1 s 09 3 0 2 0 r 10 1 4 0 0 C XX BS 21275; BS 21276; BS 21277; BS 21278; BS 21280; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA2:GATA2:Athamap XX RN [1]; RX PUBMED: 12139008 RL Teakle GR, Manfield IW, Graham JF, Gilmartin PM. 2002. Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics. Plant Mol Biol. 50:43-57. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GT1/GT1/Athamap XX ID GT1:GT1:Athamap XX NA GT1 XX DE GT1 XX OS Arabidopsis thaliana XX BF 7513; XX P0 A C G T 01 9 1 7 1 r 02 7 1 4 6 w 03 10 2 4 2 a 04 5 3 3 7 w 05 4 2 9 3 g 06 0 0 18 0 G 07 1 0 0 17 T 08 11 0 1 6 w 09 17 0 0 1 A 10 14 1 0 3 A 11 11 0 0 7 w 12 9 2 0 7 w XX BS 21284; BS 21285; BS 21286; BS 21287; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GT1:GT1:Athamap XX RN [1]; RX PUBMED: 10394897 RL Ouwerkerk P. B., Trimborn T. O., Hilliou F., Memelink J. Nuclear factors GT-1 and 3AF1 interact with multiple sequences within the promoter of the Tdc gene from Madagascar periwinkle: GT-1 is involved in UV light-induced expression. Mol. Gen. Genet. 26:610-622 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HY5/HY5/Athamap XX ID HY5:HY5:Athamap XX NA HY5 XX DE HY5 XX OS Arabidopsis thaliana XX BF 3540; XX P0 A C G T 01 0 2 0 0 C 02 0 2 0 0 C 03 2 0 0 0 A 04 0 2 0 0 C 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 2 0 G 08 0 0 1 1 k 09 0 2 0 0 C 10 2 0 0 0 A 11 0 0 0 2 T XX BS 21288; BS 21289; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HY5:HY5:Athamap XX RN [1]; RX PUBMED: 9596629 RL Chattopadhyay S., Ang L.-H., Puente P., Deng X.-W., Wei N. Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression.. Plant Cell 10:673-683 (1998). RN [2]; RX PUBMED: 15078335 RL Cluis CP, Mouchel CF, Hardtke CS. 2004. The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways. Plant J. 38:332-47. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ID1/ID1/Athamap XX ID ID1:ID1:Athamap XX NA ID1 XX DE ID1 XX OS Zea mays XX BF 1702; XX P0 A C G T 01 0 3 0 12 T 02 0 0 0 15 T 03 0 1 0 14 T 04 0 0 14 1 G 05 0 0 1 14 T 06 0 14 0 1 C 07 0 5 8 2 s 08 0 6 0 9 y 09 4 2 0 9 w 10 5 1 0 9 w 11 3 1 0 11 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ID1:ID1:Athamap XX RN [1]; RX PUBMED: 15020707 RL Kozaki A., Hake S., Colasanti J. The maize ID1 flowering time regulator is a zinc finger protein with novel DNA binding properties.. Nucleic Acids Res. 32:1710-1720 (2004). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB1/MYB1/Athamap XX ID MYB1:MYB1:Athamap XX NA MYB1 XX DE MYB1 XX OS Arabidopsis thaliana XX BF 7514; XX P0 A C G T 01 0 1 0 1 y 02 0 2 0 0 C 03 0 0 0 2 T 04 2 0 0 0 A 05 2 0 0 0 A 06 0 2 0 0 C 07 0 0 0 2 T 08 0 0 2 0 G XX BS 21290; BS 21291; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB1:MYB1:Athamap XX RN [1]; RX PUBMED: 8312738 RL Urao T., Yamaguchi-Shinozaki K., Urao S., Shinozaki K. An Arabidopsis myb homolog is induced by dehydration stress and its gene product binds to the conserved MYB recognition sequence. Plant Cell 5:1529-1539 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB2/MYB2/Athamap XX ID MYB2:MYB2:Athamap XX NA MYB2 XX DE MYB2 XX OS Arabidopsis thaliana XX BF 7515; XX P0 A C G T 01 1 2 1 0 v 02 1 1 0 2 h 03 4 0 0 0 A 04 4 0 0 0 A 05 0 4 0 0 C 06 0 1 1 2 b 07 1 1 2 0 v 08 2 2 0 0 m XX BS 21292; BS 21293; BS 21290; BS 21291; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB2:MYB2:Athamap XX RN [1]; RX PUBMED: 8312738 RL Urao T., Yamaguchi-Shinozaki K., Urao S., Shinozaki K. An Arabidopsis myb homolog is induced by dehydration stress and its gene product binds to the conserved MYB recognition sequence. Plant Cell 5:1529-1539 (1993). RN [2]; RX PUBMED: 9611167 RL Hoeren FU, Dolferus R, Wu Y, Peacock WJ, Dennis ES. 1998. Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen. Genetics. 149:479-90. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB44/MYB44/Athamap XX ID MYB44:MYB44:Athamap XX NA MYB44 XX DE MYB44 XX OS Arabidopsis thaliana XX BF 7516; XX P0 A C G T 01 0 0 2 0 G 02 0 0 0 2 T 03 0 1 0 1 y 04 2 0 0 0 A 05 0 0 2 0 G 06 0 0 0 2 T 07 0 0 0 2 T 08 2 0 0 0 A 09 0 1 1 0 s 10 0 0 2 0 G XX BS 21294; BS 21295; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB44:MYB44:Athamap XX RN [1]; RX PUBMED: 9678577 RL Kirik V., Kolle K., Misera S., Baeumlein H. Two novel MYB homologues with changed expression in late embryogenesis-defective Arabidopsis mutants. Plant Mol. Biol. 37:819-827 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYC2/MYC2/Athamap XX ID MYC2:MYC2:Athamap XX NA MYC2 XX DE MYC2 XX OS Arabidopsis thaliana XX BF 7517; XX P0 A C G T 01 0 0 0 2 T 02 0 0 2 0 G 03 2 0 0 0 A 04 0 2 0 0 C 05 2 0 0 0 A 06 0 2 0 0 C 07 0 0 2 0 G 08 0 0 0 2 T XX BS 21296; BS 21297; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYC2:MYC2:Athamap XX RN [1]; RX PUBMED: 15923349 RL Yadav V, Mallappa C, Gangappa SN, Bhatia S, Chattopadhyay S. 2005. A basic helix-loop-helix transcription factor in Arabidopsis, MYC2, acts as a repressor of blue light-mediated photomorphogenic growth. Plant Cell 17: 1953-66. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC NtERF2/NtERF2/Athamap XX ID NtERF2:NtERF2:Athamap XX NA NtERF2 XX DE NtERF2 XX OS Nicotiana tabacum XX BF 1280; XX P0 A C G T 01 2 7 1 4 y 02 0 1 12 1 G 03 1 10 3 0 C 04 0 11 2 1 C 05 1 0 13 0 G 06 2 10 2 0 C 07 0 13 1 0 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=NtERF2:NtERF2:Athamap XX RN [1]; RX PUBMED: 12586355 RL Hao D., Ohme-Takagi M., Yamasaki K. A modified sensor chip for surface plasmon resonance enables a rapid determination of sequence specificity of DNA-binding proteins.. FEBS Lett. 536:151-156 (2003). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL3/SPL3/Athamap XX ID SPL3:SPL3:Athamap XX NA SPL3 XX DE SPL3 XX OS Arabidopsis thaliana XX BF 7519; XX P0 A C G T 01 0 0 0 2 T 02 0 1 0 1 y 03 0 2 0 0 C 04 0 0 2 0 G 05 0 0 0 2 T 06 2 0 0 0 A 07 0 2 0 0 C 08 2 0 0 0 A 09 2 0 0 0 A XX BS 21298; BS 21299; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL3:SPL3:Athamap XX RN [1]; RX PUBMED: 9301089 RL Cardon GH, Hohmann S, Nettesheim K, Saedler H, Huijser P. 1997. Functional analysis of the Arabidopsis thaliana SBP-box gene SPL3: a novel gene involved in the floral transition. Plant J. 12:367-77. RN [2]; RX PUBMED: 10524240 RL Cardon G, Hohmann S, Klein J, Nettesheim K, Saedler H, Huijser P. 1999. Molecular characterisation of the Arabidopsis SBP-box genes. Gene. 237:91-104. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL4/SPL4/Athamap XX ID SPL4:SPL4:Athamap XX NA SPL4 XX DE SPL4 XX OS Arabidopsis thaliana XX BF 7520; XX P0 A C G T 01 0 0 2 0 G 02 0 0 0 2 T 03 0 2 0 0 C 04 0 2 0 0 C 05 0 0 2 0 G 06 0 0 0 2 T 07 2 0 0 0 A 08 0 2 0 0 C 09 2 0 0 0 A 10 2 0 0 0 A XX BS 21300; BS 21301; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL4:SPL4:Athamap XX RN [1]; RX PUBMED: 10524240 RL Cardon G, Hohmann S, Klein J, Nettesheim K, Saedler H, Huijser P. 1999. Molecular characterisation of the Arabidopsis SBP-box genes. Gene. 237:91-104. RN [2]; RX PUBMED: 15001351 RL Yamasaki K, Kigawa T, Inoue M, Tateno M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Nunokawa E, Ishizuka Y, Terada T, Shirouzu M, Osanai T, Tanaka A, Seki M, Shinozaki K, Yokoyama S. 2004. A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors. : J Mol Biol. 337:49-63. RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SR1/SR1/Athamap XX ID SR1:SR1:Athamap XX NA SR1 XX DE SR1 XX OS Arabidopsis thaliana XX BF 7521; XX P0 A C G T 01 0 0 0 5 T 02 5 0 0 0 A 03 5 0 0 0 A 04 5 0 0 0 A 05 3 2 0 0 m 06 0 5 0 0 C 07 0 0 5 0 G 08 0 5 0 0 C 09 0 0 5 0 G 10 0 2 2 1 s 11 5 0 0 0 A 12 5 0 0 0 A 13 0 5 0 0 C 14 5 0 0 0 A XX BS 21302; BS 21303; BS 21304; BS 21305; BS 21306; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SR1:SR1:Athamap XX RN [1]; RX PUBMED: 12218065 RL Yang T, Poovaiah BW. 2002. A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants. J Biol Chem 277: 45049-58. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA1/TGA1/Athamap XX ID TGA1:TGA1:Athamap XX NA TGA1 XX DE TGA1 XX OS Arabidopsis thaliana XX BF 7522; XX P0 A C G T 01 10 4 6 11 w 02 6 6 6 13 t 03 7 8 13 3 s 04 12 8 11 0 v 05 0 0 0 31 T 06 0 0 31 0 G 07 31 0 0 0 A 08 0 31 0 0 C 09 0 0 31 0 G 10 7 3 2 19 t 11 6 3 6 16 t 12 18 0 7 6 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA1:TGA1:Athamap XX RN [1]; RX PUBMED: 1446171 RL Schindler U., Beckmann H., Cashmore A. R. TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG.. Plant Cell 4:1309-1319 (1992). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA1a/TGA1a/Athamap XX ID TGA1a:TGA1a:Athamap XX NA TGA1a XX DE TGA1a XX OS Nicotiana tabacum XX BF 3155; XX P0 A C G T 01 1 5 4 1 s 02 3 3 1 4 h 03 0 8 3 0 S 04 11 0 0 0 A 05 0 11 0 0 C 06 0 0 11 0 G 07 0 0 0 11 T 08 0 4 7 0 s 09 5 1 2 3 w 10 1 4 5 1 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA1a:TGA1a:Athamap XX RN [1]; RX PUBMED: 8487298 RL Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TINY2/TINY2/Athamap XX ID TINY2:TINY2:Athamap XX NA TINY2 XX DE TINY2 XX OS Arabidopsis thaliana XX BF 2835; XX P0 A C G T 01 1 0 0 5 T 02 6 0 0 0 A 03 0 5 1 0 C 04 1 0 0 5 T 05 3 0 2 1 r 06 0 5 0 1 C 07 0 6 0 0 C 08 0 0 6 0 G 09 4 1 0 1 a 10 0 6 0 0 C 11 6 0 0 0 A 12 0 1 0 5 T XX BS 21307; BS 21308; BS 21309; BS 21310; BS 21311; BS 21312; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TINY2:TINY2:Athamap XX RN [1]; RX PUBMED: 16053711 RL Wei G, Pan Y, Lei J, Zhu YX. 2005. Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana. J Biochem Mol Biol 38: 440-6. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TaMYB80/TaMYB80/Athamap XX ID TaMYB80:TaMYB80:Athamap XX NA TaMYB80 XX DE TaMYB80 XX OS Triticum aestivum XX BF 2555; XX P0 A C G T 01 3 4 10 3 g 02 2 5 13 0 s 03 0 0 20 0 G 04 12 2 2 4 a 05 20 0 0 0 A 06 0 0 0 20 T 07 20 0 0 0 A 08 0 0 0 20 T 09 4 8 5 3 s 10 1 19 0 0 C 11 1 7 7 5 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TaMYB80:TaMYB80:Athamap XX RN [1]; RX PUBMED: 15686526 RL Xue G. P. A CELD-fusion method for rapid determination of the DNA-binding sequence specificity of novel plant DNA-binding proteins.. Plant J. 41:638-649 (2005). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TaNAC69(1)/TaNAC69/1)(Athamap XX ID TaNAC69(1):TaNAC69:1)(Athamap XX NA TaNAC69(1) XX DE TaNAC69(1) XX OS Triticum aestivum XX BF 2554; XX P0 A C G T 01 16 0 22 0 r 02 15 3 18 2 r 03 16 1 1 20 w 04 13 0 17 8 r 05 9 5 18 6 g 06 0 38 0 0 C 07 0 0 38 0 G 08 0 0 0 38 T 09 22 1 14 1 r 10 9 7 6 16 t 11 10 9 13 6 r 12 3 9 15 11 k 13 8 9 9 12 t 14 17 5 6 10 w 15 1 15 1 21 y 16 38 0 0 0 A 17 0 38 0 0 C 18 0 0 38 0 G 19 0 6 4 28 T 20 27 9 0 2 A 21 34 0 0 4 A 22 0 26 1 11 Y 23 2 16 1 19 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TaNAC69(1):TaNAC69:1)(Athamap XX RN [1]; RL Xue GP, Bower NI, McIntyre CL, Riding GA, Kazan K, Shorter R 2006. TaNAC69 from the NAC superfamily of transcription factors is up-regulated by abiotic stresses in wheat and recognises two consensus DNA-binding sequences Funct Plant Biol 33: 43-57. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TaNAC69(2)/TaNAC69/2)(Athamap XX ID TaNAC69(2):TaNAC69:2)(Athamap XX NA TaNAC69(2) XX DE TaNAC69(2) XX OS Triticum aestivum XX BF 2554; XX P0 A C G T 01 5 0 4 0 r 02 2 2 5 0 g 03 2 0 0 7 T 04 2 3 3 1 s 05 1 0 4 4 k 06 0 1 1 7 T 07 1 2 1 5 t 08 4 1 2 2 a 09 3 1 2 3 w 10 2 4 2 1 c 11 0 4 2 3 y 12 1 1 1 6 t 13 1 1 2 5 t 14 2 1 1 5 t 15 3 1 3 2 r 16 0 5 0 4 y 17 9 0 0 0 A 18 0 9 0 0 C 19 0 0 9 0 G 20 0 2 1 6 t 21 3 5 0 1 m 22 6 0 0 3 w 23 0 7 0 2 C 24 0 2 0 7 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TaNAC69(2):TaNAC69:2)(Athamap XX RN [1]; RL Xue GP, Bower NI, McIntyre CL, Riding GA, Kazan K, Shorter R 2006. TaNAC69 from the NAC superfamily of transcription factors is up-regulated by abiotic stresses in wheat and recognises two consensus DNA-binding sequences Funct Plant Biol 33: 43-57. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WER/WER/Athamap XX ID WER:WER:Athamap XX NA WER XX DE WER XX OS Arabidopsis thaliana XX BF 7523; XX P0 A C G T 01 0 1 0 5 T 02 2 0 0 4 w 03 0 4 0 2 y 04 2 0 0 4 w 05 3 3 0 0 m 06 0 2 0 4 y 07 1 0 4 1 g 08 1 2 0 3 y 09 0 4 0 2 y 10 2 0 0 4 w 11 0 1 5 0 G 12 0 1 0 5 T 13 2 4 0 0 m XX BS 21313; BS 21314; BS 21315; BS 21316; BS 21317; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WER:WER:Athamap XX RN [1]; RX PUBMED: 15795220 RL Koshino-Kimura Y, Wada T, Tachibana T, Tsugeki R, Ishiguro S, Okada K. 2005. Regulation of CAPRICE transcription by MYB proteins for root epidermis differentiation in Arabidopsis. Plant Cell Physiol 46: 817-26. RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY18/WRKY18/Athamap XX ID WRKY18:WRKY18:Athamap XX NA WRKY18 XX DE WRKY18 XX OS Arabidopsis thaliana XX BF 7524; XX P0 A C G T 01 2 0 2 1 r 02 0 0 5 0 G 03 0 0 0 5 T 04 0 5 0 0 C 05 5 0 0 0 A 06 5 0 0 0 A 07 2 2 0 1 m 08 1 0 4 0 G XX BS 21318; BS 21319; BS 21320; BS 21321; BS 21322; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY18:WRKY18:Athamap XX RN [1]; RX PUBMED: 11135117 RL Du L, Chen Z. 2000. Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in Arabidopsis. Plant J. 24:837-47. RN [2]; RX PUBMED: 11449049 RL Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. RN [3]; RX PUBMED: 12068113 RL Chen C, Chen Z. 2002. Potentiation of developmentally regulated plant defense response by AtWRKY18, a pathogen-induced Arabidopsis transcription factor. Plant Physiol. 129:706-16. RN [4]; RX PUBMED: 16603654 RL Xu X, Chen C, Fan B, Chen Z. 2006. Physical and functional interactions between pathogen-induced Arabidopsis WRKY18, WRKY40, and WRKY60 transcription factors. Plant Cell 18: 1310-26. RN [5]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAP1/ZAP1/Athamap XX ID ZAP1:ZAP1:Athamap XX NA ZAP1 XX DE ZAP1 XX OS Arabidopsis thaliana XX BF 7525; XX P0 A C G T 01 0 0 0 45 T 02 0 0 0 45 T 03 0 0 45 0 G 04 45 0 0 0 A 05 0 45 0 0 C 06 0 44 0 1 C 07 1 3 39 2 G 08 33 6 3 3 A 09 2 4 35 4 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAP1:ZAP1:Athamap XX RN [1]; RX PUBMED: 8972846 RL de Pater S., Greco V., Pham K., Memelink J., Kijne J. Characterization of a zinc-dependent transcriptional activator from Arabidopsis. Nucleic Acids Res. 24:4624-4631 (1996). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HAHB-4/HAHB4/Athamap XX ID HAHB-4:HAHB4:Athamap XX NA HAHB-4 XX DE HAHB-4 XX OS Helianthus annuus; Helianthus anuus XX BF 2827; XX P0 A C G T 01 1 0 0 24 T 02 25 0 0 0 A 03 25 0 0 0 A 04 0 0 0 25 T 05 7 0 14 4 r 06 25 0 0 0 A 07 0 0 0 25 T 08 3 1 3 18 T 09 6 5 14 0 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HAHB-4:HAHB4:Athamap XX CC sequences selected with recombinant HAHB-4 from a pool of double-stranded oligonucleotides containing a core of 9 random nucleotides; 2 or 3 rounds of selection and amplification XX RN [1]; RX PUBMED: 10377247 RL Palena C. M., Gonzalez D. H., Chan R. L. A monomer-dimer equilibrium modulates the interaction of the sunflower homeodomain leucine-zipper protein Hahb-4 with DNA.. J. Biochem. 341 ( Pt 1):81-87 (1999). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PCF2/PCF2/Athamap XX ID PCF2:PCF2:Athamap XX NA PCF2 XX DE PCF2 XX OS Oryza sativa; Oryza sativa Japonica Group XX BF 7518; XX P0 A C G T 01 15 14 11 24 t 02 16 14 30 14 g 03 3 1 66 6 G 04 3 6 65 2 G 05 17 19 25 15 s 06 2 71 2 1 C 07 0 73 3 0 C 08 0 75 0 1 C 09 64 1 8 3 A 10 1 66 2 7 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PCF2:PCF2:Athamap XX CC sequences selected with recombinant PCF2 from a pool of double-stranded oligonucleotides containing a core of 8 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 12000681 RL Kosugi S., Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family.. Plant J. 30:337-348 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL15/AGL15/Athamap XX ID AGL15:AGL15:Athamap XX NA AGL15 XX DE AGL15 XX OS Arabidopsis thaliana XX BF 3011; XX P0 A C G T 01 5 4 3 20 t 02 4 2 1 25 T 03 16 2 4 10 w 04 0 32 0 0 C 05 1 15 0 16 y 06 17 4 1 10 w 07 10 3 2 17 w 08 17 0 1 14 w 09 13 0 0 19 w 10 19 1 2 10 w 11 8 1 4 19 w 12 19 0 12 1 r 13 0 0 31 1 G 14 9 5 4 14 w 15 26 1 1 4 A 16 19 3 4 6 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL15:AGL15:Athamap XX CC sequences selected with recombinant AGL15 from a pool of double-stranded oligonucleotides containing a core of 26 random nucleotides; 3 to 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PCF5/PCF5/Athamap XX ID PCF5:PCF5:Athamap XX NA PCF5 XX DE PCF5 XX OS Oryza sativa XX BF 2310; XX P0 A C G T 01 6 3 63 3 G 02 4 20 5 52 t 03 0 0 82 1 G 04 1 0 82 0 G 05 5 22 13 43 y 06 0 83 0 0 C 07 0 83 0 0 C 08 4 74 3 2 C 09 17 24 25 15 s 10 15 28 12 26 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PCF5:PCF5:Athamap XX CC sequences selected with recombinant PCF5 from a pool of double-stranded oligonucleotides containing a core of 18 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 12000681 RL Kosugi S., Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family.. Plant J. 30:337-348 (2002). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB-77/AtMYB77/Athamap XX ID AtMYB-77:AtMYB77:Athamap XX NA AtMYB-77 XX DE AtMYB-77 XX OS Arabidopsis thaliana XX BF 7494; BF 10005; XX P0 A C G T 01 33 30 20 17 m 02 57 17 17 9 a 03 27 9 37 27 d 04 6 30 20 44 y 05 9 6 82 3 G 06 68 3 23 6 A 07 0 100 0 0 C 08 50 0 50 0 r 09 0 0 100 0 G 10 0 0 0 100 T 11 0 0 0 100 T 12 68 3 26 3 R 13 3 55 30 12 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB-77:AtMYB77:Athamap XX CC figures are percentages; sequences selected with recombinant AtMYB-77 from a pool of double-stranded oligonucleotides containing a core of 13 random nucleotides; 4 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 9628022 RL Romero I., Fuertes A., Benito M. J., Malpica J., Leyva A., Paz-Ares J. More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J. 14:273-284 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB-15/AtMYB15/Athamap XX ID AtMYB-15:AtMYB15:Athamap XX NA AtMYB-15 XX DE AtMYB-15 XX OS Arabidopsis thaliana XX BF 7493; BF 9995; XX P0 A C G T 01 4 73 9 14 C 02 27 18 51 4 r 03 64 18 18 0 a 04 4 64 18 14 c 05 0 0 100 0 G 06 0 0 100 0 G 07 0 0 0 100 T 08 87 4 0 9 A 09 0 0 100 0 G 10 0 0 100 0 G 11 0 0 0 100 T 12 18 0 78 4 G 13 4 0 87 9 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB-15:AtMYB15:Athamap XX CC figures are percentages; sequences selected with recombinant AtMYB-15 from a pool of double-stranded oligonucleotides containing a core of 13 random nucleotides; 4 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 9628022 RL Romero I., Fuertes A., Benito M. J., Malpica J., Leyva A., Paz-Ares J. More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J. 14:273-284 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AtMYB-84/AtMYB84/Athamap XX ID AtMYB-84:AtMYB84:Athamap XX NA AtMYB-84 XX DE AtMYB-84 XX OS Arabidopsis thaliana XX BF 1272; BF 9997; XX P0 A C G T 01 22 18 42 18 g 02 0 14 86 0 G 03 18 4 78 0 G 04 14 9 55 22 g 05 0 0 100 0 G 06 0 0 100 0 G 07 0 0 0 100 T 08 78 4 4 14 A 09 0 0 100 0 G 10 0 0 100 0 G 11 0 0 0 100 T 12 0 0 96 4 G 13 4 32 60 4 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AtMYB-84:AtMYB84:Athamap XX CC figures are percentages; sequences selected with recombinant AtMYB-84 from a pool of double-stranded oligonucleotides containing a core of 13 random nucleotides; 4 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 9628022 RL Romero I., Fuertes A., Benito M. J., Malpica J., Leyva A., Paz-Ares J. More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J. 14:273-284 (1998). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGP1/AGP1/Athamap XX ID AGP1:AGP1:Athamap XX NA AGP1 XX DE AG-motif binding protein 1 XX OS Nicotiana tabacum XX BF 2407; XX P0 A C G T 01 5 5 1 8 h 02 2 10 3 4 c 03 19 0 0 0 A 04 0 0 19 0 G 05 19 0 0 0 A 06 0 0 0 19 T 07 0 19 0 0 C 08 0 4 0 15 T 09 14 0 3 2 A 10 4 5 5 5 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGP1:AGP1:Athamap XX CC sequences selected with recombinant AGP1 from a pool of double-stranded oligonucleotides containing a core of 28 random nucleotides; 7 rounds of selection and amplification XX RN [1]; RX PUBMED: 14617085 RL Sugimoto K., Takeda S., Hirochika H. Transcriptional activation mediated by binding of a plant GATA-type zinc finger protein AGP1 to the AG-motif (AGATCCAA) of the wound-inducible Myb gene NtMyb2.. Plant J. 36:550-564 (2003). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL12/AHL12/ArabidopsisPBM XX ID AHL12:AHL12:ArabidopsisPBM XX NA AHL12 XX DE AHL12 XX OS Arabidopsis thaliana XX BF 8859; XX P0 A C G T 01 37 8 13 42 w 02 77 2 15 6 A 03 84 4 2 10 A 04 48 1 1 50 w 05 33 1 0 66 w 06 66 0 1 33 w 07 51 0 1 48 w 08 10 2 4 84 T 09 6 15 2 77 T 10 39 10 14 37 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL12:AHL12:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL12/AHL12_2/ArabidopsisPBM XX ID AHL12:AHL12_2:ArabidopsisPBM XX NA AHL12 XX DE AHL12 XX OS Arabidopsis thaliana XX BF 8859; XX P0 A C G T 01 34 9 42 15 r 02 55 2 2 41 w 03 37 2 2 59 w 04 79 0 1 20 A 05 74 0 1 25 W 06 25 1 0 74 W 07 20 1 0 79 T 08 59 2 2 37 w 09 40 3 2 55 w 10 6 18 2 74 T XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL12:AHL12_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL12/AHL12_3/ArabidopsisPBM XX ID AHL12:AHL12_3:ArabidopsisPBM XX NA AHL12 XX DE AHL12 XX OS Arabidopsis thaliana XX BF 8859; XX P0 A C G T 01 42 11 11 36 w 02 83 2 5 10 A 03 44 1 1 54 w 04 55 1 1 43 w 05 36 0 0 64 w 06 63 1 0 36 w 07 43 1 1 55 w 08 54 1 0 45 w 09 10 5 2 83 T 10 25 18 5 52 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL12:AHL12_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL20/AHL20/ArabidopsisPBM XX ID AHL20:AHL20:ArabidopsisPBM XX NA AHL20 XX DE AHL20 XX OS Arabidopsis thaliana XX BF 8860; XX P0 A C G T 01 44 16 11 29 w 02 95 1 1 3 A 03 88 0 1 11 A 04 7 1 1 91 T 05 87 0 0 13 A 06 13 0 0 87 T 07 91 0 1 8 A 08 11 1 0 88 T 09 3 1 1 95 T 10 44 10 21 25 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL20:AHL20:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL20/AHL20_2/ArabidopsisPBM XX ID AHL20:AHL20_2:ArabidopsisPBM XX NA AHL20 XX DE AHL20 XX OS Arabidopsis thaliana XX BF 8860; XX P0 A C G T 01 28 27 9 36 h 02 77 7 7 9 A 03 75 1 0 24 A 04 12 1 1 86 T 05 25 1 0 74 T 06 77 1 0 22 A 07 84 1 0 15 A 08 65 1 0 34 w 09 5 3 2 90 T 10 61 9 10 20 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL20:AHL20_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL20/AHL20_3/ArabidopsisPBM XX ID AHL20:AHL20_3:ArabidopsisPBM XX NA AHL20 XX DE AHL20 XX OS Arabidopsis thaliana XX BF 8860; XX P0 A C G T 01 17 20 21 42 t 02 89 5 3 3 A 03 40 1 1 58 w 04 37 1 1 61 w 05 69 2 1 28 W 06 28 0 3 69 W 07 61 1 1 37 w 08 58 1 1 40 w 09 3 3 5 89 T 10 48 22 11 19 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL20:AHL20_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL25/AHL25/ArabidopsisPBM XX ID AHL25:AHL25:ArabidopsisPBM XX NA AHL25 XX DE AHL25 XX OS Arabidopsis thaliana XX BF 8861; XX P0 A C G T 01 30 17 28 25 d 02 87 3 5 5 A 03 61 0 1 38 w 04 21 0 0 79 T 05 22 1 0 77 T 06 78 0 0 22 A 07 79 0 0 21 A 08 38 1 0 61 w 09 5 5 3 87 T 10 39 16 9 36 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL25:AHL25:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL25/AHL25_2/ArabidopsisPBM XX ID AHL25:AHL25_2:ArabidopsisPBM XX NA AHL25 XX DE AHL25 XX OS Arabidopsis thaliana XX BF 8861; XX P0 A C G T 01 49 14 14 23 a 02 86 4 6 4 A 03 64 1 1 34 w 04 35 0 1 64 w 05 69 1 0 30 W 06 29 0 1 70 W 07 64 1 0 35 w 08 35 1 0 64 w 09 4 6 4 86 T 10 36 16 12 36 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL25:AHL25_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AHL25/AHL25_3/ArabidopsisPBM XX ID AHL25:AHL25_3:ArabidopsisPBM XX NA AHL25 XX DE AHL25 XX OS Arabidopsis thaliana XX BF 8861; XX P0 A C G T 01 37 18 16 29 w 02 54 9 15 22 a 03 74 0 1 25 W 04 38 1 0 61 w 05 29 0 0 71 W 06 49 0 0 51 w 07 83 0 1 16 A 08 37 1 0 62 w 09 8 3 6 83 T 10 28 10 6 56 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AHL25:AHL25_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC46/ANAC46/ArabidopsisPBM XX ID ANAC46:ANAC46:ArabidopsisPBM XX NA ANAC46 XX DE ANAC46 XX OS Arabidopsis thaliana XX BF 8862; XX P0 A C G T 01 18 15 4 63 t 02 54 22 8 16 a 03 6 63 4 27 y 04 81 12 4 3 A 05 10 86 2 2 C 06 9 5 81 5 G 07 15 56 11 18 c 08 46 40 5 9 m 09 81 3 10 6 A 10 12 46 12 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC46:ANAC46:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC55/ANAC55/ArabidopsisPBM XX ID ANAC55:ANAC55:ArabidopsisPBM XX NA ANAC55 XX DE ANAC55 XX OS Arabidopsis thaliana XX BF 8863; XX P0 A C G T 01 35 19 16 30 w 02 80 3 4 13 A 03 2 77 2 19 C 04 97 2 0 1 A 05 2 96 1 1 C 06 2 2 95 1 G 07 1 12 13 74 T 08 88 8 0 4 A 09 87 1 0 12 A 10 9 39 11 41 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC55:ANAC55:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC55/ANAC55_2/ArabidopsisPBM XX ID ANAC55:ANAC55_2:ArabidopsisPBM XX NA ANAC55 XX DE ANAC55 XX OS Arabidopsis thaliana XX BF 8863; XX P0 A C G T 01 39 12 30 19 r 02 27 3 6 64 w 03 3 23 4 70 T 04 89 5 4 2 A 05 5 88 2 5 C 06 5 2 88 5 G 07 2 4 5 89 T 08 71 3 23 3 A 09 64 6 3 27 w 10 6 32 7 55 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC55:ANAC55_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANAC58/ANAC58/ArabidopsisPBM XX ID ANAC58:ANAC58:ArabidopsisPBM XX NA ANAC58 XX DE ANAC58 XX OS Arabidopsis thaliana XX BF 8864; XX P0 A C G T 01 26 23 28 23 r 02 37 12 34 17 r 03 10 67 5 18 c 04 92 3 2 3 A 05 26 69 3 2 M 06 3 4 91 2 G 07 12 69 7 12 C 08 63 25 1 11 a 09 76 9 3 12 A 10 21 28 16 35 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANAC58:ANAC58:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR11/ARR11/ArabidopsisPBM XX ID ARR11:ARR11:ArabidopsisPBM XX NA ARR11 XX DE ARR11 XX OS Arabidopsis thaliana XX BF 8865; XX P0 A C G T 01 48 11 22 19 a 02 62 5 5 28 w 03 93 1 3 3 A 04 0 1 98 1 G 05 100 0 0 0 A 06 1 0 0 99 T 07 73 2 1 24 A 08 0 83 0 17 C 09 1 1 97 1 G 10 19 22 50 9 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR11:ARR11:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR11/ARR11_2/ArabidopsisPBM XX ID ARR11:ARR11_2:ArabidopsisPBM XX NA ARR11 XX DE ARR11 XX OS Arabidopsis thaliana XX BF 8865; XX P0 A C G T 01 29 20 27 24 r 02 16 51 9 24 c 03 23 10 64 3 g 04 9 2 56 33 k 05 83 1 2 14 A 06 14 2 1 83 T 07 33 56 2 9 m 08 3 64 10 23 c 09 24 9 51 16 g 10 20 42 16 22 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR11:ARR11_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR11/ARR11_3/ArabidopsisPBM XX ID ARR11:ARR11_3:ArabidopsisPBM XX NA ARR11 XX DE ARR11 XX OS Arabidopsis thaliana XX BF 8865; XX P0 A C G T 01 35 13 22 30 w 02 68 7 12 13 a 03 84 2 7 7 A 04 5 2 73 20 G 05 95 1 2 2 A 06 2 2 1 95 T 07 20 73 2 5 C 08 8 7 1 84 T 09 14 12 6 68 t 10 22 20 30 28 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR11:ARR11_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR14/ARR14/ArabidopsisPBM XX ID ARR14:ARR14:ArabidopsisPBM XX NA ARR14 XX DE ARR14 XX OS Arabidopsis thaliana XX BF 8866; XX P0 A C G T 01 53 9 12 26 w 02 95 0 3 2 A 03 1 0 98 1 G 04 99 1 0 0 A 05 0 0 0 100 T 06 51 15 0 34 w 07 0 96 0 4 C 08 1 0 96 3 G 09 9 48 40 3 s 10 19 12 8 61 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR14:ARR14:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR14/ARR14_2/ArabidopsisPBM XX ID ARR14:ARR14_2:ArabidopsisPBM XX NA ARR14 XX DE ARR14 XX OS Arabidopsis thaliana XX BF 8866; XX P0 A C G T 01 18 26 38 18 s 02 26 54 8 12 m 03 36 6 57 1 r 04 13 1 62 24 g 05 92 1 1 6 A 06 6 1 1 92 T 07 24 63 0 13 c 08 1 57 6 36 y 09 12 8 54 26 k 10 16 48 19 17 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR14:ARR14_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ARR14/ARR14_3/ArabidopsisPBM XX ID ARR14:ARR14_3:ArabidopsisPBM XX NA ARR14 XX DE ARR14 XX OS Arabidopsis thaliana XX BF 8866; XX P0 A C G T 01 10 38 43 9 s 02 77 7 14 2 A 03 90 1 9 0 A 04 3 0 94 3 G 05 98 0 1 1 A 06 0 1 0 99 T 07 3 94 0 3 C 08 0 9 1 90 T 09 1 14 8 77 T 10 10 47 38 5 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ARR14:ARR14_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF1/ATERF1/ArabidopsisPBM XX ID ATERF1:ATERF1:ArabidopsisPBM XX NA ATERF1 XX DE ATERF1 XX OS Arabidopsis thaliana XX BF 7505; XX P0 A C G T 01 5 3 83 9 G 02 4 15 71 10 G 03 19 60 15 6 c 04 3 2 93 2 G 05 4 48 38 10 s 06 6 85 5 4 C 07 6 10 73 11 G 08 8 52 35 5 s 09 6 80 10 4 C 10 9 37 29 25 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF1:ATERF1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATERF1/ATERF1_2/ArabidopsisPBM XX ID ATERF1:ATERF1_2:ArabidopsisPBM XX NA ATERF1 XX DE ATERF1 XX OS Arabidopsis thaliana XX BF 7505; XX P0 A C G T 01 14 33 23 30 y 02 14 15 11 60 t 03 4 1 94 1 G 04 3 90 6 1 C 05 1 95 0 4 C 06 4 1 95 0 G 07 1 6 90 3 G 08 2 94 0 4 C 09 60 12 15 13 a 10 35 20 29 16 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATERF1:ATERF1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB12/ATHB12/ArabidopsisPBM XX ID ATHB12:ATHB12:ArabidopsisPBM XX NA ATHB12 XX DE ATHB12 XX OS Arabidopsis thaliana XX BF 8867; XX P0 A C G T 01 22 18 24 36 t 02 58 19 11 12 a 03 67 5 5 23 a 04 2 4 0 94 T 05 5 20 63 12 g 06 97 1 1 1 A 07 1 1 2 96 T 08 3 1 2 94 T 09 13 2 77 8 G 10 24 14 57 5 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB12:ATHB12:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ATHB51/ATHB51/ArabidopsisPBM XX ID ATHB51:ATHB51:ArabidopsisPBM XX NA ATHB51 XX DE ATHB51 XX OS Arabidopsis thaliana XX BF 8868; XX P0 A C G T 01 14 38 16 32 y 02 69 25 0 6 M 03 99 0 0 1 A 04 0 1 0 99 T 05 41 1 0 58 w 06 99 0 1 0 A 07 2 0 0 98 T 08 0 3 1 96 T 09 10 2 78 10 G 10 32 26 21 21 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ATHB51:ATHB51:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At1g77200/At1g77200/ArabidopsisPBM XX ID At1g77200:At1g77200:ArabidopsisPBM XX NA At1g77200 XX DE At1g77200 XX OS Arabidopsis thaliana XX BF 8869; XX P0 A C G T 01 6 56 15 23 c 02 8 76 4 12 C 03 75 0 25 0 R 04 0 99 1 0 C 05 1 99 0 0 C 06 0 0 99 1 G 07 99 0 0 1 A 08 1 99 0 0 C 09 89 0 10 1 A 10 25 32 21 22 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At1g77200:At1g77200:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g35610/At4g35610/ArabidopsisPBM XX ID At4g35610:At4g35610:ArabidopsisPBM XX NA At4g35610 XX DE At4g35610 XX OS Arabidopsis thaliana XX BF 8870; XX P0 A C G T 01 31 14 36 19 r 02 13 6 26 55 k 03 7 69 13 11 C 04 82 6 2 10 A 05 3 2 87 8 G 06 8 87 2 3 C 07 10 2 5 83 T 08 11 12 69 8 G 09 55 26 6 13 m 10 38 38 15 9 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g35610:At4g35610:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g28300/At5g28300/ArabidopsisPBM XX ID At5g28300:At5g28300:ArabidopsisPBM XX NA At5g28300 XX DE At5g28300 XX OS Arabidopsis thaliana XX BF 8871; XX P0 A C G T 01 23 38 21 18 c 02 58 1 38 3 r 03 1 93 3 3 C 04 9 8 75 8 G 05 1 1 98 0 G 06 1 1 0 98 T 07 75 1 13 11 A 08 95 1 2 2 A 09 61 15 4 20 a 10 29 5 2 64 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g28300:At5g28300:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CCA1/CCA1/ArabidopsisPBM XX ID CCA1:CCA1:ArabidopsisPBM XX NA CCA1 XX DE CCA1 XX OS Arabidopsis thaliana XX BF 2814; XX P0 A C G T 01 60 8 10 22 a 02 93 0 2 5 A 03 96 0 4 0 A 04 98 0 2 0 A 05 4 0 0 96 T 06 99 0 1 0 A 07 0 1 0 99 T 08 1 99 0 0 C 09 3 9 1 87 T 10 17 21 11 51 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CCA1:CCA1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CCA1/CCA1_2/ArabidopsisPBM XX ID CCA1:CCA1_2:ArabidopsisPBM XX NA CCA1 XX DE CCA1 XX OS Arabidopsis thaliana XX BF 2814; XX P0 A C G T 01 46 12 21 21 a 02 91 2 4 3 A 03 1 1 95 3 G 04 97 1 1 1 A 05 1 1 1 97 T 06 94 3 0 3 A 07 2 35 1 62 y 08 47 1 51 1 r 09 41 26 22 11 m 10 29 14 35 22 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CCA1:CCA1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DAG2/DAG2/ArabidopsisPBM XX ID DAG2:DAG2:ArabidopsisPBM XX NA DAG2 XX DE DAG2 XX OS Arabidopsis thaliana XX BF 8872; XX P0 A C G T 01 16 41 31 12 s 02 76 3 18 3 A 03 60 0 1 39 w 04 99 0 0 1 A 05 99 0 0 1 A 06 75 0 25 0 R 07 0 0 98 2 G 08 1 20 6 73 T 09 24 4 56 16 g 10 39 18 31 12 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DAG2:DAG2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DDF1/DDF1/ArabidopsisPBM XX ID DDF1:DDF1:ArabidopsisPBM XX NA DDF1 XX DE DDF1 XX OS Arabidopsis thaliana XX BF 8873; XX P0 A C G T 01 19 34 27 20 s 02 98 0 2 0 A 03 1 2 0 97 T 04 1 0 99 0 G 05 1 0 0 99 T 06 1 99 0 0 C 07 0 1 99 0 G 08 17 0 83 0 G 09 0 79 0 21 C 10 28 30 29 13 v XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DDF1:DDF1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR3/DEAR3/ArabidopsisPBM XX ID DEAR3:DEAR3:ArabidopsisPBM XX NA DEAR3 XX DE DEAR3 XX OS Arabidopsis thaliana XX BF 5573; XX P0 A C G T 01 19 23 33 25 g 02 15 79 2 4 C 03 33 1 64 2 r 04 3 89 6 2 C 05 4 93 2 1 C 06 7 4 86 3 G 07 32 52 6 10 m 08 7 83 7 3 C 09 10 42 33 15 s 10 32 23 15 30 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR3:DEAR3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR3/DEAR3_2/ArabidopsisPBM XX ID DEAR3:DEAR3_2:ArabidopsisPBM XX NA DEAR3 XX DE DEAR3 XX OS Arabidopsis thaliana XX BF 5573; XX P0 A C G T 01 11 33 28 28 b 02 12 16 60 12 g 03 60 9 11 20 a 04 88 1 9 2 A 05 1 96 1 2 C 06 2 96 1 1 C 07 3 2 94 1 G 08 82 8 6 4 A 09 2 96 0 2 C 10 16 32 40 12 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR3:DEAR3_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR4/DEAR4/ArabidopsisPBM XX ID DEAR4:DEAR4:ArabidopsisPBM XX NA DEAR4 XX DE DEAR4 XX OS Arabidopsis thaliana XX BF 5593; XX P0 A C G T 01 18 40 28 14 s 02 2 96 1 1 C 03 80 0 20 0 A 04 0 99 1 0 C 05 2 98 0 0 C 06 0 1 99 0 G 07 98 1 0 1 A 08 0 99 0 1 C 09 85 12 1 2 A 10 12 32 8 48 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR4:DEAR4:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DEAR4/DEAR4_2/ArabidopsisPBM XX ID DEAR4:DEAR4_2:ArabidopsisPBM XX NA DEAR4 XX DE DEAR4 XX OS Arabidopsis thaliana XX BF 5593; XX P0 A C G T 01 29 22 37 12 r 02 3 13 76 8 G 03 2 94 1 3 C 04 12 0 87 1 G 05 1 91 8 0 C 06 0 98 1 1 C 07 1 1 95 3 G 08 0 84 9 7 C 09 3 86 2 9 C 10 4 21 14 61 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DEAR4:DEAR4_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF5.7/DOF5.7/ArabidopsisPBM XX ID DOF5.7:DOF5.7:ArabidopsisPBM XX NA DOF5.7 XX DE DOF5.7 XX OS Arabidopsis thaliana XX BF 8872; XX P0 A C G T 01 39 21 27 13 r 02 45 9 22 24 a 03 69 1 6 24 A 04 97 0 1 2 A 05 90 0 8 2 A 06 36 4 59 1 r 07 49 6 44 1 r 08 10 19 46 25 g 09 17 21 42 20 g 10 29 22 31 18 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF5.7:DOF5.7:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DOF5.7/DOF5.7_2/ArabidopsisPBM XX ID DOF5.7:DOF5.7_2:ArabidopsisPBM XX NA DOF5.7 XX DE DOF5.7 XX OS Arabidopsis thaliana XX BF 8872; XX P0 A C G T 01 44 8 24 24 a 02 47 14 13 26 w 03 2 94 2 2 C 04 2 0 94 4 G 05 2 1 2 95 T 06 0 2 2 96 T 07 89 3 2 6 A 08 87 5 3 5 A 09 4 90 1 5 C 10 12 11 52 25 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DOF5.7:DOF5.7_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB2C/DREB2C/ArabidopsisPBM XX ID DREB2C:DREB2C:ArabidopsisPBM XX NA DREB2C XX DE DREB2C XX OS Arabidopsis thaliana XX BF 8874; XX P0 A C G T 01 14 5 67 14 g 02 3 2 93 2 G 03 0 96 1 3 C 04 1 5 94 0 G 05 2 0 97 1 G 06 0 97 0 3 C 07 0 94 5 1 C 08 3 1 96 0 G 09 3 92 2 3 C 10 13 67 7 13 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB2C:DREB2C:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC DREB2C/DREB2C_2/ArabidopsisPBM XX ID DREB2C:DREB2C_2:ArabidopsisPBM XX NA DREB2C XX DE DREB2C XX OS Arabidopsis thaliana XX BF 8874; XX P0 A C G T 01 9 52 27 12 s 02 11 76 12 1 C 03 81 0 19 0 A 04 0 98 0 2 C 05 1 99 0 0 C 06 2 0 98 0 G 07 78 16 5 1 A 08 1 98 0 1 C 09 81 4 3 12 A 10 30 9 11 50 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=DREB2C:DREB2C_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF1/ERF1/ArabidopsisPBM XX ID ERF1:ERF1:ArabidopsisPBM XX NA ERF1 XX DE ERF1 XX OS Arabidopsis thaliana XX BF 4198; XX P0 A C G T 01 37 12 28 23 r 02 6 33 46 15 s 03 15 82 1 2 C 04 1 1 97 1 G 05 1 95 3 1 C 06 4 95 0 1 C 07 2 0 97 1 G 08 5 90 2 3 C 09 1 97 1 1 C 10 58 6 24 12 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF1:ERF1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ETT/ETT/ArabidopsisPBM XX ID ETT:ETT:ArabidopsisPBM XX NA ETT XX DE ETT XX OS Arabidopsis thaliana XX BF 8875; XX P0 A C G T 01 10 8 24 58 t 02 0 0 8 92 T 03 0 1 99 0 G 04 0 2 0 98 T 05 0 99 0 1 C 06 0 1 98 1 G 07 0 2 97 1 G 08 62 12 21 5 a 09 58 9 19 14 a 10 35 28 11 26 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ETT:ETT:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ETT/ETT_2/ArabidopsisPBM XX ID ETT:ETT_2:ArabidopsisPBM XX NA ETT XX DE ETT XX OS Arabidopsis thaliana XX BF 8875; XX P0 A C G T 01 25 27 11 37 h 02 5 6 23 66 t 03 7 2 90 1 G 04 3 1 3 93 T 05 9 88 2 1 C 06 1 2 88 9 G 07 93 3 1 3 A 08 1 90 2 7 C 09 66 23 6 5 a 10 9 6 66 19 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ETT:ETT_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GATA12/GATA12/ArabidopsisPBM XX ID GATA12:GATA12:ArabidopsisPBM XX NA GATA12 XX DE GATA12 XX OS Arabidopsis thaliana XX BF 8876; XX P0 A C G T 01 15 21 22 42 t 02 19 28 15 38 y 03 60 11 23 6 a 04 19 7 74 0 G 05 97 0 2 1 A 06 1 2 0 97 T 07 1 74 7 18 C 08 6 23 11 60 t 09 38 15 28 19 r 10 28 28 18 26 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GATA12:GATA12:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GLK1/GLK1/ArabidopsisPBM XX ID GLK1:GLK1:ArabidopsisPBM XX NA GLK1 XX DE GLK1 XX OS Arabidopsis thaliana XX BF 8877; XX P0 A C G T 01 25 46 21 8 m 02 25 4 62 9 g 03 2 4 92 2 G 04 95 1 4 0 A 05 26 0 9 65 w 06 65 9 0 26 w 07 0 4 1 95 T 08 2 92 4 2 C 09 9 62 4 25 c 10 38 13 19 30 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GLK1:GLK1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC GLK1/GLK1_2/ArabidopsisPBM XX ID GLK1:GLK1_2:ArabidopsisPBM XX NA GLK1 XX DE GLK1 XX OS Arabidopsis thaliana XX BF 8877; XX P0 A C G T 01 30 17 45 8 r 02 83 12 4 1 A 03 14 3 77 6 G 04 92 1 2 5 A 05 78 1 0 21 A 06 1 1 1 97 T 07 2 94 1 3 C 08 3 10 4 83 T 09 22 5 54 19 g 10 24 9 25 42 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=GLK1:GLK1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFB2A/HSFB2A/ArabidopsisPBM XX ID HSFB2A:HSFB2A:ArabidopsisPBM XX NA HSFB2A XX DE HSFB2A XX OS Arabidopsis thaliana XX BF 8878; XX P0 A C G T 01 27 35 37 1 v 02 3 1 94 2 G 03 94 1 4 1 A 04 95 2 1 2 A 05 13 36 27 24 s 06 24 27 36 13 s 07 2 1 1 96 T 08 1 4 2 93 T 09 1 94 1 4 C 10 0 46 20 34 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFB2A:HSFB2A:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFB2A/HSFB2A_2/ArabidopsisPBM XX ID HSFB2A:HSFB2A_2:ArabidopsisPBM XX NA HSFB2A XX DE HSFB2A XX OS Arabidopsis thaliana XX BF 8878; XX P0 A C G T 01 9 39 21 31 y 02 7 4 6 83 T 03 3 7 1 89 T 04 3 93 1 3 C 05 0 27 14 59 y 06 59 14 27 0 r 07 3 1 93 3 G 08 89 1 7 3 A 09 82 6 5 7 A 10 28 26 30 16 v XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFB2A:HSFB2A_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFC1/HSFC1/ArabidopsisPBM XX ID HSFC1:HSFC1:ArabidopsisPBM XX NA HSFC1 XX DE HSFC1 XX OS Arabidopsis thaliana XX BF 8879; XX P0 A C G T 01 8 38 22 32 y 02 3 2 1 94 T 03 1 3 0 96 T 04 0 99 1 0 C 05 0 5 5 90 T 06 90 5 5 0 A 07 0 1 99 0 G 08 96 0 3 1 A 09 94 2 2 2 A 10 46 24 14 16 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFC1:HSFC1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HSFC1/HSFC1_2/ArabidopsisPBM XX ID HSFC1:HSFC1_2:ArabidopsisPBM XX NA HSFC1 XX DE HSFC1 XX OS Arabidopsis thaliana XX BF 8879; XX P0 A C G T 01 35 29 35 1 v 02 2 2 95 1 G 03 93 1 4 2 A 04 91 2 2 5 A 05 16 17 60 7 g 06 7 60 17 16 c 07 5 2 2 91 T 08 2 4 1 93 T 09 1 95 2 2 C 10 2 39 25 34 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HSFC1:HSFC1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ICU4/ICU4/ArabidopsisPBM XX ID ICU4:ICU4:ArabidopsisPBM XX NA ICU4 XX DE ICU4 XX OS Arabidopsis thaliana XX BF 8880; XX P0 A C G T 01 20 7 64 9 g 02 9 17 6 68 t 03 72 19 6 3 A 04 93 3 1 3 A 05 5 1 1 93 T 06 28 6 28 38 d 07 92 2 1 5 A 08 3 1 3 93 T 09 3 6 19 72 T 10 68 6 17 9 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ICU4:ICU4:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN1/KAN1/ArabidopsisPBM XX ID KAN1:KAN1:ArabidopsisPBM XX NA KAN1 XX DE KAN1 XX OS Arabidopsis thaliana XX BF 8881; XX P0 A C G T 01 15 27 33 25 s 02 43 13 24 20 a 03 26 21 29 24 r 04 62 2 4 32 w 05 13 19 6 62 t 06 90 1 7 2 A 07 5 9 2 84 T 08 4 15 17 64 t 09 6 88 2 4 C 10 5 20 47 28 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN1:KAN1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN4/KAN4/ArabidopsisPBM XX ID KAN4:KAN4:ArabidopsisPBM XX NA KAN4 XX DE KAN4 XX OS Arabidopsis thaliana XX BF 8882; XX P0 A C G T 01 36 12 50 2 r 02 1 1 97 1 G 03 94 1 3 2 A 04 91 0 0 9 A 05 1 10 0 89 T 06 89 0 10 1 A 07 9 0 0 91 T 08 2 3 1 94 T 09 1 97 1 1 C 10 11 28 22 39 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN4:KAN4:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC KAN4/KAN4_2/ArabidopsisPBM XX ID KAN4:KAN4_2:ArabidopsisPBM XX NA KAN4 XX DE KAN4 XX OS Arabidopsis thaliana XX BF 8882; XX P0 A C G T 01 1 1 97 1 G 02 76 5 12 7 A 03 66 0 1 33 w 04 1 19 1 79 T 05 95 0 5 0 A 06 2 1 0 97 T 07 4 2 1 93 T 08 1 97 1 1 C 09 2 57 12 29 y 10 13 44 13 30 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=KAN4:KAN4_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LBD16/LBD16/ArabidopsisPBM XX ID LBD16:LBD16:ArabidopsisPBM XX NA LBD16 XX DE LBD16 XX OS Arabidopsis thaliana XX BF 8883; XX P0 A C G T 01 31 20 6 43 w 02 7 27 7 59 y 03 2 90 8 0 C 04 1 96 2 1 C 05 4 8 85 3 G 06 4 18 69 9 G 07 47 5 44 4 r 08 45 6 27 22 r 09 48 13 10 29 w 10 41 14 8 37 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LBD16:LBD16:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB111/MYB111/ArabidopsisPBM XX ID MYB111:MYB111:ArabidopsisPBM XX NA MYB111 XX DE MYB111 XX OS Arabidopsis thaliana XX BF 8884; XX P0 A C G T 01 28 9 29 34 d 02 23 0 76 1 G 03 0 0 64 36 k 04 1 1 0 98 T 05 87 1 1 11 A 06 2 0 98 0 G 07 1 1 85 13 G 08 1 0 0 99 T 09 53 3 39 5 r 10 7 32 46 15 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB111:MYB111:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB111/MYB111_2/ArabidopsisPBM XX ID MYB111:MYB111_2:ArabidopsisPBM XX NA MYB111 XX DE MYB111 XX OS Arabidopsis thaliana XX BF 8884; XX P0 A C G T 01 57 10 11 22 a 02 6 0 93 1 G 03 1 0 85 14 G 04 0 0 1 99 T 05 59 1 3 37 w 06 1 0 99 0 G 07 0 1 73 26 K 08 2 1 0 97 T 09 30 2 68 0 R 10 15 13 58 14 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB111:MYB111_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB46/MYB46/ArabidopsisPBM XX ID MYB46:MYB46:ArabidopsisPBM XX NA MYB46 XX DE MYB46 XX OS Arabidopsis thaliana XX BF 8885; XX P0 A C G T 01 42 16 22 20 a 02 8 0 91 1 G 03 0 0 39 61 k 04 1 0 0 99 T 05 84 3 1 12 A 06 1 0 99 0 G 07 1 0 90 9 G 08 0 3 0 97 T 09 58 2 36 4 r 10 26 22 37 15 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB46:MYB46:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB46/MYB46_2/ArabidopsisPBM XX ID MYB46:MYB46_2:ArabidopsisPBM XX NA MYB46 XX DE MYB46 XX OS Arabidopsis thaliana XX BF 8885; XX P0 A C G T 01 16 29 24 31 y 02 5 54 12 29 y 03 92 3 3 2 A 04 82 13 2 3 A 05 1 96 1 2 C 06 21 68 7 4 c 07 82 1 16 1 A 08 25 64 2 9 c 09 6 72 3 19 C 10 31 19 39 11 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB46:MYB46_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB52/MYB52/ArabidopsisPBM XX ID MYB52:MYB52:ArabidopsisPBM XX NA MYB52 XX DE MYB52 XX OS Arabidopsis thaliana XX BF 8886; XX P0 A C G T 01 64 8 17 11 a 02 49 30 15 6 m 03 24 52 10 14 c 04 10 11 4 75 T 05 92 1 4 3 A 06 87 10 1 2 A 07 2 92 3 3 C 08 9 5 79 7 G 09 13 2 79 6 G 10 46 18 9 27 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB52:MYB52:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB52/MYB52_2/ArabidopsisPBM XX ID MYB52:MYB52_2:ArabidopsisPBM XX NA MYB52 XX DE MYB52 XX OS Arabidopsis thaliana XX BF 8886; XX P0 A C G T 01 8 48 27 17 s 02 3 2 93 2 G 03 2 1 5 92 T 04 1 3 1 95 T 05 73 15 4 8 A 06 2 3 92 3 G 07 1 4 3 92 T 08 2 3 6 89 T 09 24 5 62 9 g 10 15 45 17 23 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB52:MYB52_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB55/MYB55/ArabidopsisPBM XX ID MYB55:MYB55:ArabidopsisPBM XX NA MYB55 XX DE MYB55 XX OS Arabidopsis thaliana XX BF 8887; XX P0 A C G T 01 11 36 5 48 y 02 98 0 2 0 A 03 5 95 0 0 C 04 0 99 0 1 C 05 23 5 2 70 T 06 98 0 2 0 A 07 27 73 0 0 M 08 0 96 0 4 C 09 12 5 76 7 G 10 25 28 30 17 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB55:MYB55:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB55/MYB55_2/ArabidopsisPBM XX ID MYB55:MYB55_2:ArabidopsisPBM XX NA MYB55 XX DE MYB55 XX OS Arabidopsis thaliana XX BF 8887; XX P0 A C G T 01 8 54 14 24 c 02 8 1 89 2 G 03 1 1 70 28 K 04 1 8 0 91 T 05 11 3 69 17 G 06 1 0 98 1 G 07 1 1 44 54 k 08 2 0 2 96 T 09 10 5 83 2 G 10 15 11 61 13 g XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB55:MYB55_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC MYB59/MYB59/ArabidopsisPBM XX ID MYB59:MYB59:ArabidopsisPBM XX NA MYB59 XX DE MYB59 XX OS Arabidopsis thaliana XX BF 8888; XX P0 A C G T 01 59 5 16 20 a 02 36 1 55 8 r 03 2 1 11 86 T 04 3 1 1 95 T 05 87 4 2 7 A 06 2 0 96 2 G 07 2 1 95 2 G 08 4 4 0 92 T 09 55 27 2 16 m 10 32 28 16 24 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=MYB59:MYB59:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ORA47/ORA47/ArabidopsisPBM XX ID ORA47:ORA47:ArabidopsisPBM XX NA ORA47 XX DE ORA47 XX OS Arabidopsis thaliana XX BF 8889; XX P0 A C G T 01 13 66 3 18 c 02 58 0 41 1 r 03 0 99 0 1 C 04 1 99 0 0 C 05 0 1 99 0 G 06 72 1 6 21 A 07 0 99 0 1 C 08 4 94 0 2 C 09 74 1 7 18 A 10 64 13 5 18 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ORA47:ORA47:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ORA47/ORA47_2/ArabidopsisPBM XX ID ORA47:ORA47_2:ArabidopsisPBM XX NA ORA47 XX DE ORA47 XX OS Arabidopsis thaliana XX BF 8889; XX P0 A C G T 01 17 5 30 48 k 02 9 13 73 5 G 03 1 93 1 5 C 04 7 0 92 1 G 05 0 97 3 0 C 06 1 98 1 0 C 07 1 1 97 1 G 08 25 65 5 5 m 09 4 93 1 2 C 10 21 25 13 41 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ORA47:ORA47_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIF3/PIF3/ArabidopsisPBM XX ID PIF3:PIF3:ArabidopsisPBM XX NA PIF3 XX DE PIF3 XX OS Arabidopsis thaliana XX BF 2964; XX P0 A C G T 01 18 37 37 8 s 02 0 96 3 1 C 03 1 99 0 0 C 04 99 1 0 0 A 05 0 97 0 3 C 06 3 0 97 0 G 07 0 0 1 99 T 08 0 0 99 1 G 09 1 3 96 0 G 10 9 40 35 16 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIF3:PIF3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.3/RAP2.3/ArabidopsisPBM XX ID RAP2.3:RAP2.3:ArabidopsisPBM XX NA RAP2.3 XX DE RAP2.3 XX OS Arabidopsis thaliana XX BF 2841; XX P0 A C G T 01 25 14 46 15 r 02 12 23 54 11 g 03 15 76 3 6 C 04 1 1 98 0 G 05 1 75 24 0 C 06 2 98 0 0 C 07 1 0 98 1 G 08 11 77 3 9 C 09 26 66 1 7 m 10 49 9 17 25 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.3:RAP2.3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.3/RAP2.3_2/ArabidopsisPBM XX ID RAP2.3:RAP2.3_2:ArabidopsisPBM XX NA RAP2.3 XX DE RAP2.3 XX OS Arabidopsis thaliana XX BF 2841; XX P0 A C G T 01 9 29 57 5 s 02 34 57 4 5 m 03 0 0 100 0 G 04 0 96 3 1 C 05 1 98 1 0 C 06 1 1 97 1 G 07 2 87 3 8 C 08 28 67 1 4 m 09 62 7 11 20 a 10 38 17 9 36 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.3:RAP2.3_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.3/RAP2.3_3/ArabidopsisPBM XX ID RAP2.3:RAP2.3_3:ArabidopsisPBM XX NA RAP2.3 XX DE RAP2.3 XX OS Arabidopsis thaliana XX BF 2841; XX P0 A C G T 01 14 16 65 5 g 02 21 70 3 6 C 03 0 0 100 0 G 04 0 98 1 1 C 05 8 91 0 1 C 06 0 23 76 1 G 07 16 70 4 10 C 08 8 90 0 2 C 09 72 4 6 18 A 10 31 17 18 34 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.3:RAP2.3_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.6/RAP2.6/ArabidopsisPBM XX ID RAP2.6:RAP2.6:ArabidopsisPBM XX NA RAP2.6 XX DE RAP2.6 XX OS Arabidopsis thaliana XX BF 5568; XX P0 A C G T 01 12 19 48 21 g 02 3 28 68 1 S 03 3 95 1 1 C 04 1 0 99 0 G 05 0 89 10 1 C 06 1 98 1 0 C 07 0 0 99 1 G 08 2 95 1 2 C 09 7 92 0 1 C 10 30 3 61 6 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.6:RAP2.6:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.6/RAP2.6_2/ArabidopsisPBM XX ID RAP2.6:RAP2.6_2:ArabidopsisPBM XX NA RAP2.6 XX DE RAP2.6 XX OS Arabidopsis thaliana XX BF 5568; XX P0 A C G T 01 38 36 7 19 m 02 56 6 29 9 r 03 5 0 94 1 G 04 2 94 2 2 C 05 1 94 4 1 C 06 3 0 95 2 G 07 5 77 7 11 C 08 49 46 1 4 m 09 68 15 1 16 a 10 34 24 1 41 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.6:RAP2.6_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP2.6/RAP2.6_3/ArabidopsisPBM XX ID RAP2.6:RAP2.6_3:ArabidopsisPBM XX NA RAP2.6 XX DE RAP2.6 XX OS Arabidopsis thaliana XX BF 5568; XX P0 A C G T 01 22 50 9 19 c 02 69 9 8 14 A 03 13 2 13 72 T 04 14 1 72 13 G 05 68 8 7 17 A 06 1 98 0 1 C 07 0 1 96 3 G 08 1 1 97 1 G 09 1 96 0 3 C 10 49 17 2 32 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP2.6:RAP2.6_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC REM1/REM1/ArabidopsisPBM XX ID REM1:REM1:ArabidopsisPBM XX NA REM1 XX DE REM1 XX OS Arabidopsis thaliana XX BF 8890; XX P0 A C G T 01 12 20 53 15 g 02 1 90 2 7 C 03 2 1 1 96 T 04 96 0 1 3 A 05 0 99 0 1 C 06 98 0 1 1 A 07 25 23 0 52 t 08 1 90 2 7 C 09 53 3 2 42 w 10 32 25 15 28 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=REM1:REM1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC REM1/REM1_2/ArabidopsisPBM XX ID REM1:REM1_2:ArabidopsisPBM XX NA REM1 XX DE REM1 XX OS Arabidopsis thaliana XX BF 8890; XX P0 A C G T 01 10 63 23 4 c 02 4 76 0 20 C 03 3 1 92 4 G 04 2 2 1 95 T 05 2 1 96 1 G 06 8 1 2 89 T 07 90 5 1 4 A 08 4 11 76 9 G 09 76 6 11 7 A 10 14 43 37 6 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=REM1:REM1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RRTF1/RRTF1/ArabidopsisPBM XX ID RRTF1:RRTF1:ArabidopsisPBM XX NA RRTF1 XX DE RRTF1 XX OS Arabidopsis thaliana XX BF 8891; XX P0 A C G T 01 24 15 46 15 g 02 4 29 66 1 s 03 5 94 1 0 C 04 1 0 99 0 G 05 0 83 17 0 C 06 1 99 0 0 C 07 0 1 99 0 G 08 4 86 1 9 C 09 21 77 0 2 C 10 69 2 21 8 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RRTF1:RRTF1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RRTF1/RRTF1_2/ArabidopsisPBM XX ID RRTF1:RRTF1_2:ArabidopsisPBM XX NA RRTF1 XX DE RRTF1 XX OS Arabidopsis thaliana XX BF 8891; XX P0 A C G T 01 7 46 43 4 s 02 10 87 2 1 C 03 0 1 99 0 G 04 0 97 2 1 C 05 2 98 0 0 C 06 0 1 98 1 G 07 3 91 2 4 C 08 44 55 0 1 m 09 90 2 3 5 A 10 27 17 8 48 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RRTF1:RRTF1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RRTF1/RRTF1_3/ArabidopsisPBM XX ID RRTF1:RRTF1_3:ArabidopsisPBM XX NA RRTF1 XX DE RRTF1 XX OS Arabidopsis thaliana XX BF 8891; XX P0 A C G T 01 6 30 60 4 s 02 5 92 2 1 C 03 0 0 99 1 G 04 0 97 3 0 C 05 2 97 0 1 C 06 1 1 98 0 G 07 6 82 1 11 C 08 17 77 0 6 C 09 81 4 8 7 A 10 21 8 4 67 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RRTF1:RRTF1_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RVE1/RVE1/ArabidopsisPBM XX ID RVE1:RVE1:ArabidopsisPBM XX NA RVE1 XX DE RVE1 XX OS Arabidopsis thaliana XX BF 8892; XX P0 A C G T 01 65 4 6 25 a 02 92 0 2 6 A 03 92 0 7 1 A 04 98 0 1 1 A 05 7 0 3 90 T 06 98 1 1 0 A 07 0 1 0 99 T 08 1 98 0 1 C 09 2 10 4 84 T 10 9 20 28 43 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RVE1:RVE1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RVE1/RVE1_2/ArabidopsisPBM XX ID RVE1:RVE1_2:ArabidopsisPBM XX NA RVE1 XX DE RVE1 XX OS Arabidopsis thaliana XX BF 8892; XX P0 A C G T 01 20 31 29 20 s 02 54 31 4 11 m 03 65 9 16 10 a 04 23 3 15 59 t 05 91 4 3 2 A 06 3 3 3 91 T 07 6 89 4 1 C 08 30 19 5 46 w 09 61 16 13 10 a 10 50 16 6 28 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RVE1:RVE1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL1/SPL1/ArabidopsisPBM XX ID SPL1:SPL1:ArabidopsisPBM XX NA SPL1 XX DE SPL1 XX OS Arabidopsis thaliana XX BF 8893; XX P0 A C G T 01 31 13 29 27 d 02 3 88 1 8 C 03 2 92 1 5 C 04 2 0 98 0 G 05 0 1 1 98 T 06 98 1 1 0 A 07 0 99 0 1 C 08 5 2 92 1 G 09 8 1 88 3 G 10 60 22 1 17 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL1:SPL1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL1/SPL1_2/ArabidopsisPBM XX ID SPL1:SPL1_2:ArabidopsisPBM XX NA SPL1 XX DE SPL1 XX OS Arabidopsis thaliana XX BF 8893; XX P0 A C G T 01 3 88 1 8 C 02 5 63 5 27 y 03 1 1 98 0 G 04 0 1 0 99 T 05 99 1 0 0 A 06 0 99 0 1 C 07 1 0 99 0 G 08 1 0 98 1 G 09 60 22 1 17 a 10 34 40 9 17 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL1:SPL1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL7/SPL7/ArabidopsisPBM XX ID SPL7:SPL7:ArabidopsisPBM XX NA SPL7 XX DE SPL7 XX OS Arabidopsis thaliana XX BF 8894; XX P0 A C G T 01 9 43 24 24 c 02 5 78 12 5 C 03 4 3 91 2 G 04 4 1 9 86 T 05 89 6 2 3 A 06 5 92 1 2 C 07 7 11 80 2 G 08 29 21 36 14 r 09 12 61 4 23 c 10 38 25 25 12 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL7:SPL7:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC STY1/STY1/ArabidopsisPBM XX ID STY1:STY1:ArabidopsisPBM XX NA STY1 XX DE STY1 XX OS Arabidopsis thaliana XX BF 8895; XX P0 A C G T 01 18 45 18 19 c 02 5 87 6 2 C 03 5 91 1 3 C 04 1 95 3 1 C 05 1 1 1 97 T 06 97 1 1 1 A 07 1 3 95 1 G 08 3 1 91 5 G 09 2 6 87 5 G 10 10 27 24 39 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=STY1:STY1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC STY1/STY1_2/ArabidopsisPBM XX ID STY1:STY1_2:ArabidopsisPBM XX NA STY1 XX DE STY1 XX OS Arabidopsis thaliana XX BF 8895; XX P0 A C G T 01 41 23 20 16 a 02 3 89 5 3 C 03 5 1 3 91 T 04 91 1 3 5 A 05 2 1 95 2 G 06 2 95 1 2 C 07 5 3 0 92 T 08 91 3 1 5 A 09 3 5 89 3 G 10 11 50 8 31 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=STY1:STY1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP15/TCP15/ArabidopsisPBM XX ID TCP15:TCP15:ArabidopsisPBM XX NA TCP15 XX DE TCP15 XX OS Arabidopsis thaliana XX BF 5383; XX P0 A C G T 01 1 5 81 13 G 02 1 0 98 1 G 03 0 0 100 0 G 04 6 14 77 3 G 05 1 94 1 4 C 06 0 99 0 1 C 07 0 99 0 1 C 08 95 1 4 0 A 09 1 96 2 1 C 10 27 45 12 16 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP15:TCP15:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP16/TCP16/ArabidopsisPBM XX ID TCP16:TCP16:ArabidopsisPBM XX NA TCP16 XX DE TCP16 XX OS Arabidopsis thaliana XX BF 5383; XX P0 A C G T 01 2 25 3 70 T 02 12 0 87 1 G 03 0 0 99 1 G 04 1 0 99 0 G 05 11 12 3 74 T 06 0 99 0 1 C 07 0 99 1 0 C 08 98 0 2 0 A 09 0 98 1 1 C 10 46 42 1 11 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP16:TCP16:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP23/TCP23/ArabidopsisPBM XX ID TCP23:TCP23:ArabidopsisPBM XX NA TCP23 XX DE TCP23 XX OS Arabidopsis thaliana XX BF 8896; XX P0 A C G T 01 2 5 77 16 G 02 0 0 97 3 G 03 1 1 98 0 G 04 4 8 84 4 G 05 1 97 1 1 C 06 0 98 1 1 C 07 1 98 0 1 C 08 96 1 3 0 A 09 1 96 1 2 C 10 74 13 3 10 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP23:TCP23:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA2/TGA2/ArabidopsisPBM XX ID TGA2:TGA2:ArabidopsisPBM XX NA TGA2 XX DE TGA2 XX OS Arabidopsis thaliana XX BF 3636; XX P0 A C G T 01 50 15 33 2 r 02 2 2 1 95 T 03 1 1 86 12 G 04 97 0 1 2 A 05 0 86 0 14 C 06 14 0 85 1 G 07 2 1 0 97 T 08 12 86 1 1 C 09 96 1 2 1 A 10 3 41 17 39 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA2:TGA2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA2/TGA2_2/ArabidopsisPBM XX ID TGA2:TGA2_2:ArabidopsisPBM XX NA TGA2 XX DE TGA2 XX OS Arabidopsis thaliana XX BF 3636; XX P0 A C G T 01 3 9 38 50 k 02 97 0 2 1 A 03 0 98 0 2 C 04 2 1 97 0 G 05 1 0 0 99 T 06 3 97 0 0 C 07 99 0 1 0 A 08 0 11 38 51 k 09 8 70 16 6 C 10 49 14 20 17 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA2:TGA2_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TOE1/TOE1/ArabidopsisPBM XX ID TOE1:TOE1:ArabidopsisPBM XX NA TOE1 XX DE TOE1 XX OS Arabidopsis thaliana XX BF 8897; XX P0 A C G T 01 68 2 2 28 W 02 1 87 0 12 C 03 13 84 2 1 C 04 1 0 1 98 T 05 4 93 2 1 C 06 1 0 98 1 G 07 1 0 19 80 T 08 96 2 0 2 A 09 5 81 4 10 C 10 23 31 21 25 c XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TOE1:TOE1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TOE1/TOE1_2/ArabidopsisPBM XX ID TOE1:TOE1_2:ArabidopsisPBM XX NA TOE1 XX DE TOE1 XX OS Arabidopsis thaliana XX BF 8897; XX P0 A C G T 01 42 5 32 21 r 02 75 3 4 18 A 03 79 1 1 19 A 04 3 92 2 3 C 05 14 64 21 1 c 06 4 3 1 92 T 07 68 2 26 4 r 08 8 63 25 4 s 09 3 1 93 3 G 10 91 3 0 6 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TOE1:TOE1_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TOE1/TOE1_3/ArabidopsisPBM XX ID TOE1:TOE1_3:ArabidopsisPBM XX NA TOE1 XX DE TOE1 XX OS Arabidopsis thaliana XX BF 8897; XX P0 A C G T 01 26 14 10 50 w 02 73 3 2 22 A 03 85 2 2 11 A 04 1 93 2 4 C 05 2 83 13 2 C 06 4 2 0 94 T 07 3 3 2 92 T 08 94 4 1 1 A 09 84 1 10 5 A 10 41 35 7 17 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TOE1:TOE1_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TOE2/TOE2/ArabidopsisPBM XX ID TOE2:TOE2:ArabidopsisPBM XX NA TOE2 XX DE TOE2 XX OS Arabidopsis thaliana XX BF 8898; XX P0 A C G T 01 61 2 5 32 w 02 0 92 0 8 C 03 13 84 2 1 C 04 0 1 1 98 T 05 6 92 1 1 C 06 1 0 98 1 G 07 0 0 11 89 T 08 98 1 0 1 A 09 3 83 1 13 C 10 19 24 24 33 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TOE2:TOE2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TOE2/TOE2_2/ArabidopsisPBM XX ID TOE2:TOE2_2:ArabidopsisPBM XX NA TOE2 XX DE TOE2 XX OS Arabidopsis thaliana XX BF 8898; XX P0 A C G T 01 44 11 9 36 w 02 81 2 1 16 A 03 87 0 1 12 A 04 1 94 0 5 C 05 12 79 8 1 C 06 2 1 1 96 T 07 76 3 19 2 A 08 8 68 15 9 C 09 1 0 98 1 G 10 63 4 3 30 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TOE2:TOE2_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TOE2/TOE2_3/ArabidopsisPBM XX ID TOE2:TOE2_3:ArabidopsisPBM XX NA TOE2 XX DE TOE2 XX OS Arabidopsis thaliana XX BF 8898; XX P0 A C G T 01 29 23 8 40 w 02 64 3 1 32 w 03 73 0 3 24 A 04 2 87 1 10 C 05 11 73 13 3 C 06 4 1 1 94 T 07 8 10 1 81 T 08 92 1 2 5 A 09 76 1 14 9 A 10 30 16 3 51 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TOE2:TOE2_3:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WOX13/WOX13/ArabidopsisPBM XX ID WOX13:WOX13:ArabidopsisPBM XX NA WOX13 XX DE WOX13 XX OS Arabidopsis thaliana XX BF 8899; XX P0 A C G T 01 32 16 15 37 w 02 54 2 32 12 r 03 3 12 12 73 T 04 2 93 1 4 C 05 95 1 1 3 A 06 96 1 1 2 A 07 1 1 1 97 T 08 2 86 1 11 C 09 90 3 2 5 A 10 40 15 21 24 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WOX13:WOX13:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WOX13/WOX13_2/ArabidopsisPBM XX ID WOX13:WOX13_2:ArabidopsisPBM XX NA WOX13 XX DE WOX13 XX OS Arabidopsis thaliana XX BF 8899; XX P0 A C G T 01 22 23 18 37 t 02 17 15 11 57 t 03 20 17 4 59 t 04 80 6 3 11 A 05 81 2 9 8 A 06 8 9 2 81 T 07 11 3 6 80 T 08 59 4 17 20 a 09 57 11 16 16 a 10 27 34 20 19 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WOX13:WOX13_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY12/WRKY12/ArabidopsisPBM XX ID WRKY12:WRKY12:ArabidopsisPBM XX NA WRKY12 XX DE WRKY12 XX OS Arabidopsis thaliana XX BF 8900; XX P0 A C G T 01 21 35 18 26 y 02 17 70 8 5 C 03 7 3 82 8 G 04 2 6 1 91 T 05 1 1 3 95 T 06 1 1 95 3 G 07 97 1 1 1 A 08 2 95 1 2 C 09 2 73 10 15 C 10 21 19 33 27 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY12:WRKY12:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY18/WRKY18/ArabidopsisPBM XX ID WRKY18:WRKY18:ArabidopsisPBM XX NA WRKY18 XX DE WRKY18 XX OS Arabidopsis thaliana XX BF 7524; XX P0 A C G T 01 28 22 14 36 w 02 13 58 7 22 c 03 15 2 83 0 G 04 1 1 97 1 G 05 2 0 0 98 T 06 1 98 0 1 C 07 98 1 0 1 A 08 92 1 1 6 A 09 7 20 59 14 g 10 14 50 28 8 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY18:WRKY18:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY38/WRKY38/ArabidopsisPBM XX ID WRKY38:WRKY38:ArabidopsisPBM XX NA WRKY38 XX DE WRKY38 XX OS Arabidopsis thaliana XX BF 8901; XX P0 A C G T 01 19 30 32 19 s 02 15 67 8 10 c 03 7 3 85 5 G 04 3 3 2 92 T 05 1 2 4 93 T 06 1 2 96 1 G 07 95 2 1 2 A 08 2 95 1 2 C 09 2 68 2 28 y 10 40 18 30 12 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY38:WRKY38:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC WRKY45/WRKY45/ArabidopsisPBM XX ID WRKY45:WRKY45:ArabidopsisPBM XX NA WRKY45 XX DE WRKY45 XX OS Arabidopsis thaliana XX BF 8902; XX P0 A C G T 01 30 12 32 26 d 02 5 88 3 4 C 03 2 0 89 9 G 04 1 2 0 97 T 05 0 0 1 99 T 06 0 0 99 1 G 07 99 1 0 0 A 08 1 98 0 1 C 09 1 53 1 45 y 10 64 12 13 11 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=WRKY45:WRKY45:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC YAB1/YAB1/ArabidopsisPBM XX ID YAB1:YAB1:ArabidopsisPBM XX NA YAB1 XX DE YAB1 XX OS Arabidopsis thaliana XX BF 8903; XX P0 A C G T 01 9 46 11 34 y 02 64 3 5 28 w 03 86 3 2 9 A 04 4 2 4 90 T 05 29 42 13 16 m 06 91 1 5 3 A 07 5 3 4 88 T 08 73 8 12 7 A 09 77 5 8 10 A 10 14 19 10 57 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=YAB1:YAB1:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC YAB5/YAB5/ArabidopsisPBM XX ID YAB5:YAB5:ArabidopsisPBM XX NA YAB5 XX DE YAB5 XX OS Arabidopsis thaliana XX BF 8904; XX P0 A C G T 01 28 23 22 27 w 02 53 8 18 21 a 03 78 9 5 8 A 04 7 16 3 74 T 05 18 24 54 4 g 06 78 5 3 14 A 07 11 18 5 66 t 08 15 4 10 71 T 09 73 17 6 4 A 10 29 26 16 29 h XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=YAB5:YAB5:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAT14/ZAT14/ArabidopsisPBM XX ID ZAT14:ZAT14:ArabidopsisPBM XX NA ZAT14 XX DE ZAT14 XX OS Arabidopsis thaliana XX BF 8905; XX P0 A C G T 01 12 56 11 21 c 02 74 5 6 15 A 03 1 32 65 2 s 04 5 3 0 92 T 05 28 2 63 7 r 06 7 62 2 29 y 07 92 0 3 5 A 08 2 65 32 1 s 09 15 6 5 74 T 10 21 31 39 9 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAT14:ZAT14:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAT18/ZAT18/ArabidopsisPBM XX ID ZAT18:ZAT18:ArabidopsisPBM XX NA ZAT18 XX DE ZAT18 XX OS Arabidopsis thaliana XX BF 8906; XX P0 A C G T 01 32 3 34 31 d 02 71 4 8 17 A 03 4 5 88 3 G 04 3 18 6 73 T 05 9 6 81 4 G 06 3 81 6 10 C 07 72 7 18 3 A 08 3 89 5 3 C 09 17 8 4 71 T 10 51 12 25 12 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAT18:ZAT18:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAT2/ZAT2/ArabidopsisPBM XX ID ZAT2:ZAT2:ArabidopsisPBM XX NA ZAT2 XX DE ZAT2 XX OS Arabidopsis thaliana XX BF 8907; XX P0 A C G T 01 22 43 19 16 c 02 10 44 24 22 c 03 9 69 15 7 C 04 90 0 2 8 A 05 2 3 95 0 G 06 0 95 3 2 C 07 8 2 0 90 T 08 7 15 69 9 G 09 22 24 44 10 g 10 16 38 39 7 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAT2:ZAT2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ZAT6/ZAT6/ArabidopsisPBM XX ID ZAT6:ZAT6:ArabidopsisPBM XX NA ZAT6 XX DE ZAT6 XX OS Arabidopsis thaliana XX BF 8908; XX P0 A C G T 01 17 24 14 45 t 02 4 4 6 86 T 03 83 4 3 10 A 04 85 4 2 9 A 05 2 89 4 5 C 06 88 1 2 9 A 07 1 89 9 1 C 08 2 2 1 95 T 09 87 5 4 4 A 10 28 29 22 21 m XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ZAT6:ZAT6:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP60/bZIP60/ArabidopsisPBM XX ID bZIP60:bZIP60:ArabidopsisPBM XX NA bZIP60 XX DE bZIP60 XX OS Arabidopsis thaliana XX BF 8909; XX P0 A C G T 01 33 15 42 10 r 02 2 6 3 89 T 03 3 6 84 7 G 04 89 2 4 5 A 05 1 80 1 18 C 06 18 1 80 1 G 07 5 4 2 89 T 08 7 84 6 3 C 09 89 3 6 2 A 10 5 49 12 34 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP60:bZIP60:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC bZIP60/bZIP60_2/ArabidopsisPBM XX ID bZIP60:bZIP60_2:ArabidopsisPBM XX NA bZIP60 XX DE bZIP60 XX OS Arabidopsis thaliana XX BF 8909; XX P0 A C G T 01 19 10 53 18 g 02 20 64 9 7 c 03 4 84 8 4 C 04 91 3 3 3 A 05 2 90 3 5 C 06 7 3 88 2 G 07 3 3 2 92 T 08 5 88 4 3 C 09 90 3 4 3 A 10 6 42 12 40 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=bZIP60:bZIP60_2:ArabidopsisPBM XX RN [1]; RX PUBMED: 24477691 RL Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL1/AGL1/Athamap XX ID AGL1:AGL1:Athamap XX NA AGL1 XX DE AGL1 XX OS Arabidopsis thaliana XX BF 4203; XX P0 A C G T 01 21 11 15 18 w 02 12 6 9 38 t 03 4 1 9 51 T 04 21 5 22 17 d 05 0 65 0 0 C 06 1 63 1 0 C 07 30 6 7 22 w 08 31 4 8 22 w 09 42 1 1 21 w 10 26 3 2 34 w 11 14 14 9 28 t 12 15 8 28 14 g 13 7 0 56 2 G 14 4 0 56 5 G 15 26 6 5 28 w 16 48 10 4 3 A 17 39 9 8 9 a 18 18 15 19 13 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL1:AGL1:Athamap XX CC sequences selected with recombinant AGL1 from a pool of double-stranded oligonucleotides containing a core of 65 random nucleotides; 4 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 8597661 RL Huang H., Tudor M., Su T., Zhang Y., Hu Y., Ma H. DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation.. Plant Cell 8:81-94 (1996). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL2/AGL2/Athamap XX ID AGL2:AGL2:Athamap XX NA AGL2 XX DE AGL2 XX OS Arabidopsis thaliana XX BF 3865; BF 17330; XX P0 A C G T 01 14 15 7 15 h 02 14 6 10 21 w 03 11 4 6 30 t 04 19 7 9 16 w 05 0 51 0 0 C 06 0 46 0 5 C 07 39 5 1 6 A 08 20 2 4 25 w 09 37 0 0 14 W 10 25 0 0 26 w 11 28 4 4 15 w 12 4 6 3 38 T 13 26 0 25 0 r 14 0 0 51 0 G 15 23 11 3 14 w 16 40 3 0 8 A 17 33 5 5 8 a 18 6 8 17 20 k XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL2:AGL2:Athamap XX CC sequences selected with recombinant AGL2 from a pool of double-stranded oligonucleotides containing a core of 51 random nucleotides; 4 rounds of selection and amplification; SELEX XX RN [1]; RX PUBMED: 8597661 RL Huang H., Tudor M., Su T., Zhang Y., Hu Y., Ma H. DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation.. Plant Cell 8:81-94 (1996). RN [2]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC CBT/OsCBT/Athamap XX ID CBT:OsCBT:Athamap XX NA CBT XX DE CBT XX OS Oryza sativa XX BF 2731; XX P0 A C G T 01 14 9 10 45 t 02 28 26 19 6 m 03 0 79 0 0 C 04 0 0 79 0 G 05 0 53 0 26 y 06 0 0 79 0 G 07 0 1 3 75 T 08 9 4 21 45 k 09 7 8 24 40 k 10 10 9 24 36 k 11 7 8 32 32 k 12 0 4 0 75 T 13 11 4 35 29 k 14 0 76 0 3 C 15 1 0 76 2 G XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=CBT:OsCBT:Athamap XX CC sequences selected with recombinant CBT from a pool of double-stranded oligonucleotides containing a core of 15 random nucleotides; 5 rounds of selection and amplification XX RN [1]; RX PUBMED: 16192280 RL Choi MS, Kim MC, Yoo JH, Moon BC, Koo SC, Park BO, Lee JH, Koo YD, Han HJ, Lee SY, Chung WS, Lim CO, Cho MJ. 2005. Isolation of a calmodulin-binding transcription factor from rice (Oryza sativa L.). J Biol Chem 280: 40820-31. RN [2]; RL TRANSFAC_Team. New matrix entries.. TRANSFAC Reports Rel123:0001 (2008). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL15/MA0548.1/JASPAR XX ID AGL15:MA0548.1:JASPAR XX NA AGL15 XX DE AGL15 XX OS Arabidopsis thaliana XX BF 3011; XX P0 A C G T 01 9 5 3 133 T 02 4 10 6 130 T 03 18 0 11 121 T 04 0 144 2 4 C 05 4 99 1 46 y 06 63 20 18 49 w 07 15 23 16 96 t 08 33 4 3 110 T 09 3 0 0 147 T 10 15 9 8 118 T 11 14 14 27 95 t 12 18 0 124 8 G 13 2 0 110 38 K 14 54 30 30 36 a 15 80 10 11 49 w XX BS 54373; BS 54374; BS 54375; BS 54376; BS 54377; BS 54378; BS 54379; BS 54380; BS 54381; BS 54382; BS 54383; BS 54384; BS 54385; BS 54386; BS 54387; BS 54388; BS 54389; BS 54390; BS 54391; BS 54392; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL15:MA0548.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 12743119 RL Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). RN [2]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BES1/MA0549.1/JASPAR XX ID BES1:MA0549.1:JASPAR XX NA BES1 XX DE BES1 XX OS Arabidopsis thaliana XX BF 17521; XX P0 A C G T 01 23 45 10 21 c 02 41 8 50 0 r 03 0 99 0 0 C 04 89 0 4 6 A 05 0 99 0 0 C 06 0 0 99 0 G 07 0 0 0 99 T 08 3 0 96 0 G 09 16 5 36 42 k 10 17 33 46 3 s 11 36 29 33 1 v XX BS 54412; BS 54413; BS 54414; BS 54415; BS 54416; BS 54417; BS 54418; BS 54419; BS 54420; BS 54421; BS 54422; BS 54423; BS 54424; BS 54425; BS 54426; BS 54427; BS 54428; BS 54429; BS 54430; BS 54431; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BES1:MA0549.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 15680330 RL Yin Y, Vafeados D, Tao Y, Yoshida S, Asami T, Chory J. A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120:249-59 (2005). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC BZR1/MA0550.1/JASPAR XX ID BZR1:MA0550.1:JASPAR XX NA BZR1 XX DE BZR1 XX OS Arabidopsis thaliana XX BF 2997; XX P0 A C G T 01 63 60 30 0 m 02 55 47 27 24 m 03 30 20 52 51 k 04 49 66 26 12 m 05 0 153 0 0 C 06 147 2 0 4 A 07 6 147 0 0 C 08 0 0 153 0 G 09 0 0 0 153 T 10 6 5 142 0 G 11 42 0 39 72 d 12 41 53 43 16 v 13 42 61 22 28 m 14 81 39 0 33 m XX BS 54432; BS 54433; BS 54434; BS 54435; BS 54436; BS 54437; BS 54438; BS 54439; BS 54440; BS 54441; BS 54442; BS 54443; BS 54444; BS 54445; BS 54446; BS 54447; BS 54448; BS 54449; BS 54450; BS 54451; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=BZR1:MA0550.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 15681342 RL He J. X., Gendron J. M., Sun Y., Gampala S. S., Gendron N., Sun C. Q., Wang Z. Y. BZR1 is a transcriptional repressor with dual roles in brassinosteroid homeostasis and growth responses.. Science 307:1634-1638 (2005). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC HY5/MA0551.1/JASPAR XX ID HY5:MA0551.1:JASPAR XX NA HY5 XX DE HY5 XX OS Arabidopsis thaliana XX BF 3540; XX P0 A C G T 01 103 60 68 89 w 02 108 56 62 94 w 03 52 55 30 183 t 04 9 8 279 24 G 05 150 165 1 4 m 06 0 317 1 2 C 07 310 1 9 0 A 08 3 311 5 1 C 09 1 5 311 3 G 10 0 9 1 310 T 11 2 1 317 0 G 12 4 1 165 150 k 13 24 279 8 9 C 14 183 30 55 52 a 15 94 62 56 108 w 16 89 68 60 103 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=HY5:MA0551.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 18287490 RL Song Y. H., Yoo C. M., Hong A. P., Kim S. H., Jeong H. J., Shin S. Y., Kim H. J., Yun D. J., Lim C. O., Bahk J. D., Lee S. Y., Nagao R. T., Key J. L., Hong J. C. DNA-binding study identifies C-box and hybrid C/G-box or C/A-box motifs as high-affinity binding sites for STF1 and LONG HYPOCOTYL5 proteins.. Plant Physiol. 146:1862-1877 (2008). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIF1/MA0552.1/JASPAR XX ID PIF1:MA0552.1:JASPAR XX NA PIF1 XX DE PIF1 XX OS Arabidopsis thaliana XX BF 3877; XX P0 A C G T 01 37 12 37 28 r 02 25 0 53 36 k 03 35 28 29 22 r 04 53 8 40 13 r 05 27 27 32 28 g 06 9 17 73 15 g 07 38 14 14 48 w 08 0 103 11 0 C 09 114 0 0 0 A 10 0 113 1 0 C 11 0 0 114 0 G 12 0 2 0 112 T 13 0 0 114 0 G 14 22 23 51 18 g XX BS 54452; BS 54453; BS 54454; BS 54455; BS 54456; BS 54457; BS 54458; BS 54459; BS 54460; BS 54461; BS 54462; BS 54463; BS 54464; BS 54465; BS 54466; BS 54467; BS 54468; BS 54469; BS 54470; BS 54471; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIF1:MA0552.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 15448264 RL Huq E., Al-Sady B., Hudson M., Kim C., Apel K., Quail P. H. Phytochrome-interacting factor 1 is a critical bHLH regulator of chlorophyll biosynthesis.. Science 305:1937-1941 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g54990/MA0553.1/JASPAR XX ID At3g54990:MA0553.1:JASPAR XX NA At3g54990 XX DE At3g54990 XX OS Arabidopsis thaliana XX BF 17452; XX P0 A C G T 01 0 105 0 42 Y 02 0 119 28 0 C 03 0 0 0 147 T 04 0 147 0 0 C 05 0 0 147 0 G 06 0 0 25 122 T 07 135 12 0 0 A 08 0 147 0 0 C XX BS 54472; BS 54473; BS 54474; BS 54475; BS 54476; BS 54477; BS 54478; BS 54479; BS 54480; BS 54481; BS 54482; BS 54483; BS 54484; BS 54485; BS 54486; BS 54487; BS 54488; BS 54489; BS 54490; BS 54491; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g54990:MA0553.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 19582143 RL Mathieu J, Yant LJ, Mürdter F, Küttner F, Schmid M. Repression of flowering by the miR172 target SMZ. PLoS Biol : (2009). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL20/MA0554.1/JASPAR XX ID AGL20:MA0554.1:JASPAR XX NA AGL20 XX DE AGL20 XX OS Arabidopsis thaliana XX BF 17281; XX P0 A C G T 01 288 123 99 378 w 02 172 264 113 339 y 03 65 27 34 762 T 04 62 0 51 775 T 05 117 47 89 635 T 06 20 855 13 0 C 07 0 617 9 262 Y 08 459 37 56 336 w 09 137 78 0 673 T 10 130 6 0 752 T 11 22 8 0 858 T 12 98 24 0 766 T 13 90 71 86 641 T 14 181 10 683 14 G 15 17 23 665 183 G XX BS 54492; BS 54493; BS 54494; BS 54495; BS 54496; BS 54497; BS 54498; BS 54499; BS 54500; BS 54501; BS 54502; BS 54503; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL20:MA0554.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 8774892 RL Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SVP/MA0555.1/JASPAR XX ID SVP:MA0555.1:JASPAR XX NA SVP XX DE SVP XX OS Arabidopsis thaliana XX BF 9989; XX P0 A C G T 01 28 24 21 19 m 02 28 11 8 45 w 03 28 1 10 53 w 04 33 16 11 32 w 05 7 85 0 0 C 06 3 79 1 9 C 07 58 16 7 11 a 08 67 5 8 12 A 09 86 0 0 6 A 10 77 1 2 12 A 11 78 8 3 3 A 12 34 10 14 34 w 13 16 0 74 2 G 14 0 0 92 0 G 15 71 10 0 11 A 16 84 2 2 4 A 17 77 7 2 6 A 18 34 8 39 11 r 19 50 16 5 21 a 20 38 21 3 30 w XX BS 54504; BS 54505; BS 54506; BS 54507; BS 54508; BS 54509; BS 54510; BS 54511; BS 54512; BS 54513; BS 54514; BS 54515; BS 54516; BS 54517; BS 54518; BS 54519; BS 54520; BS 54521; BS 54522; BS 54523; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SVP:MA0555.1:JASPAR XX CC imported from JASPAR; ChIP-chip XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 8774892 RL Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AP3/MA0556.1/JASPAR XX ID AP3:MA0556.1:JASPAR XX NA AP3 XX DE AP3 XX OS Arabidopsis thaliana XX BF 17349; XX P0 A C G T 01 92 36 20 143 w 02 84 33 39 135 w 03 48 241 0 2 C 04 0 232 1 58 C 05 185 61 11 34 a 06 217 22 11 41 A 07 283 0 0 8 A 08 240 1 0 50 A 09 156 10 104 21 r 10 95 0 30 166 w 11 98 2 191 0 r 12 7 0 284 0 G 13 183 56 5 47 a 14 231 18 9 33 A 15 243 9 19 20 A XX BS 54524; BS 54525; BS 54526; BS 54527; BS 54528; BS 54529; BS 54530; BS 54531; BS 54532; BS 54533; BS 54534; BS 54535; BS 54536; BS 54537; BS 54538; BS 54539; BS 54540; BS 54541; BS 54542; BS 54543; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AP3:MA0556.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 8774892 RL Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FHY3/MA0557.1/JASPAR XX ID FHY3:MA0557.1:JASPAR XX NA FHY3 XX DE FHY3 XX OS Arabidopsis thaliana XX BF 17520; XX P0 A C G T 01 46 81 40 68 y 02 75 58 25 77 w 03 9 210 9 7 C 04 226 3 2 4 A 05 2 230 1 2 C 06 3 16 213 3 G 07 0 220 0 15 C 08 4 0 228 3 G 09 18 208 6 3 C 10 16 40 17 162 T 11 63 68 40 64 h 12 82 44 50 59 w XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FHY3:MA0557.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 21803941 RL Ouyang X, Li J, Li G, Li B, Chen B, Shen H, Huang X, Mo X, Wan X, Lin R, Li S, Wang H, Deng X.W. Genome-wide binding site analysis of FAR-RED ELONGATED HYPOCOTYL3 reveals its novel function in Arabidopsis development. The Plant cell 23:2514-35 (2011). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FLC/MA0558.1/JASPAR XX ID FLC:MA0558.1:JASPAR XX NA FLC XX DE FLC XX OS Arabidopsis thaliana XX BF 9926; XX P0 A C G T 01 121 44 45 65 a 02 90 61 63 61 a 03 95 37 21 122 w 04 82 26 36 131 w 05 78 25 66 106 w 06 54 193 12 16 C 07 9 185 4 77 y 08 135 70 37 33 m 09 198 10 38 29 A 10 261 0 3 11 A 11 233 3 3 36 A 12 193 3 18 61 A 13 78 11 15 171 w 14 141 0 134 0 r 15 0 0 275 0 G 16 217 21 6 31 A 17 268 3 4 0 A 18 257 1 15 2 A 19 62 43 148 22 g 20 109 47 17 102 w 21 103 50 29 93 w XX BS 54544; BS 54545; BS 54546; BS 54547; BS 54548; BS 54549; BS 54550; BS 54551; BS 54552; BS 54553; BS 54554; BS 54555; BS 54556; BS 54557; BS 54558; BS 54559; BS 54560; BS 54561; BS 54562; BS 54563; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FLC:MA0558.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 21464308 RL Deng W, Ying H, Helliwell C.A, Taylor J.M, Peacock W.J, Dennis E.S. FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America 108:6680-5 (2011). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PI/MA0559.1/JASPAR XX ID PI:MA0559.1:JASPAR XX NA PI XX DE PI XX OS Arabidopsis thaliana XX BF 17359; XX P0 A C G T 01 156 335 48 19 m 02 57 394 44 63 C 03 357 79 67 55 a 04 448 12 83 15 A 05 551 1 4 2 A 06 498 0 12 48 A 07 301 8 244 5 r 08 312 14 69 163 w 09 231 0 327 0 r 10 7 6 545 0 G 11 446 54 7 51 A 12 495 7 24 32 A 13 456 26 60 16 A 14 256 58 199 45 r XX BS 54564; BS 54565; BS 54566; BS 54567; BS 54568; BS 54569; BS 54570; BS 54571; BS 54572; BS 54573; BS 54574; BS 54575; BS 54576; BS 54577; BS 54578; BS 54579; BS 54580; BS 54581; BS 54582; BS 54583; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PI:MA0559.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 8774892 RL Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIF3/MA0560.1/JASPAR XX ID PIF3:MA0560.1:JASPAR XX NA PIF3 XX DE PIF3 XX OS Arabidopsis thaliana XX BF 2964; XX P0 A C G T 01 210 26 148 143 d 02 58 131 222 116 g 03 19 399 94 15 C 04 0 527 0 0 C 05 527 0 0 0 A 06 0 409 0 118 C 07 0 0 527 0 G 08 0 0 0 527 T 09 0 0 527 0 G 10 259 33 137 98 r XX BS 54584; BS 54585; BS 54586; BS 54587; BS 54588; BS 54589; BS 54590; BS 54591; BS 54592; BS 54593; BS 54594; BS 54595; BS 54596; BS 54597; BS 54598; BS 54599; BS 54600; BS 54601; BS 54602; BS 54603; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIF3:MA0560.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 10797009 RL Martinez-Garcia J. F., Huq E., Quail P. H. Direct targeting of light signals to a promoter element-bound transcription factor. Science 288:859-863 (2000). RN [2]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC PIF4/MA0561.1/JASPAR XX ID PIF4:MA0561.1:JASPAR XX NA PIF4 XX DE PIF4 XX OS Arabidopsis thaliana XX BF 17482; XX P0 A C G T 01 0 335 0 0 C 02 335 0 0 0 A 03 0 335 0 0 C 04 49 0 286 0 G 05 0 0 0 335 T 06 0 0 335 0 G 07 0 99 183 53 s 08 64 206 65 0 c XX BS 54604; BS 54605; BS 54606; BS 54607; BS 54608; BS 54609; BS 54610; BS 54611; BS 54612; BS 54613; BS 54614; BS 54615; BS 54616; BS 54617; BS 54618; BS 54619; BS 54620; BS 54621; BS 54622; BS 54623; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=PIF4:MA0561.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 22536829 RL Hornitschek P, Kohnen M.V, Lorrain S, Rougemont J, Ljung K, López-Vidriero I, Franco-Zorrilla J.M, Solano R, Trevisan M, Pradervand S, Xenarios I, Fankhauser C. Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling. The Plant journal : for cell and molecular biology 71:699-711 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At3g59060/MA0562.1/JASPAR XX ID At3g59060:MA0562.1:JASPAR XX NA At3g59060 XX DE At3g59060 XX OS Arabidopsis thaliana XX BF 17460; XX P0 A C G T 01 0 78 0 208 Y 02 0 286 0 0 C 03 286 0 0 0 A 04 0 286 0 0 C 05 91 0 195 0 R 06 0 0 0 286 T 07 0 0 286 0 G 08 0 95 161 30 s XX BS 54624; BS 54625; BS 54626; BS 54627; BS 54628; BS 54629; BS 54630; BS 54631; BS 54632; BS 54633; BS 54634; BS 54635; BS 54636; BS 54637; BS 54638; BS 54639; BS 54640; BS 54641; BS 54642; BS 54643; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At3g59060:MA0562.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 22536829 RL Hornitschek P, Kohnen M.V, Lorrain S, Rougemont J, Ljung K, López-Vidriero I, Franco-Zorrilla J.M, Solano R, Trevisan M, Pradervand S, Xenarios I, Fankhauser C. Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling. The Plant journal : for cell and molecular biology 71:699-711 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC AGL9/MA0563.1/JASPAR XX ID AGL9:MA0563.1:JASPAR XX NA AGL9 XX DE AGL9 XX OS Arabidopsis thaliana XX BF 3864; XX P0 A C G T 01 24 37 29 60 t 02 19 111 5 15 C 03 1 97 1 51 y 04 77 0 0 73 w 05 12 28 5 105 T 06 19 0 5 126 T 07 0 0 0 150 T 08 9 0 24 117 T 09 11 3 22 114 T 10 9 0 138 3 G 11 0 7 114 29 G XX BS 54644; BS 54645; BS 54646; BS 54647; BS 54648; BS 54649; BS 54650; BS 54651; BS 54652; BS 54653; BS 54654; BS 54655; BS 54656; BS 54657; BS 54658; BS 54659; BS 54660; BS 54661; BS 54662; BS 54663; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=AGL9:MA0563.1:JASPAR XX CC imported from JASPAR; ChIP-seq XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 19033361 RL Melzer R, Verelst W, Theissen G. The class E floral homeotic protein SEPALLATA3 is sufficient to loop DNA in 'floral quartet'-like complexes in vitro. Nucleic acids research 37:144-57 (2009). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABI3/MA0564.1/JASPAR XX ID ABI3:MA0564.1:JASPAR XX NA ABI3 XX DE ABI3 XX OS Arabidopsis thaliana XX BF 7489; XX P0 A C G T 01 6 60 9 25 y 02 15 16 15 53 t 03 3 7 85 5 G 04 1 96 2 1 C 05 97 1 1 1 A 06 1 1 1 97 T 07 1 1 96 1 G 08 6 84 8 2 C 09 50 15 13 22 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABI3:MA0564.1:JASPAR XX CC imported from JASPAR; PBM XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC FUS3/MA0565.1/JASPAR XX ID FUS3:MA0565.1:JASPAR XX NA FUS3 XX DE FUS3 XX OS Arabidopsis thaliana XX BF 7508; XX P0 A C G T 01 8 61 4 28 y 02 1 2 97 1 G 03 1 99 0 0 C 04 99 0 0 1 A 05 1 0 1 99 T 06 0 0 99 1 G 07 1 97 2 1 C 08 29 3 59 9 r 09 15 44 25 16 s XX BS 54664; BS 54665; BS 54666; BS 54667; BS 54668; BS 54669; BS 54670; BS 54671; BS 54672; BS 54673; BS 54674; BS 54675; BS 54676; BS 54677; BS 54678; BS 54679; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=FUS3:MA0565.1:JASPAR XX CC imported from JASPAR; PBM XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC RAP-1/MA0566.1/JASPAR XX ID RAP-1:MA0566.1:JASPAR XX NA RAP-1 XX DE RAP-1 XX OS Arabidopsis thaliana XX BF 7517; XX P0 A C G T 01 25 10 60 5 r 02 9 91 0 0 C 03 97 0 2 1 A 04 0 85 0 15 C 05 15 0 85 0 G 06 1 2 0 97 T 07 0 0 91 9 G 08 5 60 10 25 y XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=RAP-1:MA0566.1:JASPAR XX CC imported from JASPAR; PBM XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 21284757 RL Godoy M, Franco-Zorrilla J.M, Pérez-Pérez J, Oliveros J.C, Lorenzo O, Solano R. Improved protein-binding microarrays for the identification of DNA-binding specificities of transcription factors. The Plant journal : for cell and molecular biology 66:700-11 (2011). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ERF1B/MA0567.1/JASPAR XX ID ERF1B:MA0567.1:JASPAR XX NA ERF1B XX DE ERF1B XX OS Arabidopsis thaliana XX BF 4198; XX P0 A C G T 01 42 54 3 1 m 02 1 1 98 1 G 03 0 98 1 1 C 04 4 96 0 0 C 05 2 0 97 1 G 06 2 92 2 4 C 07 1 98 1 1 C 08 58 5 24 12 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ERF1B:MA0567.1:JASPAR XX CC imported from JASPAR; PBM XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 21284757 RL Godoy M, Franco-Zorrilla J.M, Pérez-Pérez J, Oliveros J.C, Lorenzo O, Solano R. Improved protein-binding microarrays for the identification of DNA-binding specificities of transcription factors. The Plant journal : for cell and molecular biology 66:700-11 (2011). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At5g46760/MA0568.1/JASPAR XX ID At5g46760:MA0568.1:JASPAR XX NA At5g46760 XX DE At5g46760 XX OS Arabidopsis thaliana XX BF 9988; XX P0 A C G T 01 25 28 40 7 v 02 10 89 0 0 C 03 97 0 2 1 A 04 0 84 0 16 C 05 16 0 84 0 G 06 1 2 0 97 T 07 0 0 89 10 G 08 7 40 28 25 b XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At5g46760:MA0568.1:JASPAR XX CC imported from JASPAR; PBM XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g17880/MA0569.1/JASPAR XX ID At4g17880:MA0569.1:JASPAR XX NA At4g17880 XX DE At4g17880 XX OS Arabidopsis thaliana XX BF 9777; XX P0 A C G T 01 38 18 36 8 r 02 5 95 0 0 C 03 99 0 0 1 A 04 0 94 0 6 C 05 2 0 98 0 G 06 0 1 0 99 T 07 0 0 98 2 G 08 2 72 8 17 C XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g17880:MA0569.1:JASPAR XX CC imported from JASPAR; PBM XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 21335373 RL Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ABF1/MA0570.1/JASPAR XX ID ABF1:MA0570.1:JASPAR XX NA ABF1 XX DE ABF1 XX OS Arabidopsis thaliana XX BF 3856; XX P0 A C G T 01 0 4 32 8 G 02 8 2 28 6 g 03 19 16 0 9 m 04 0 35 8 1 C 05 43 0 1 0 A 06 0 44 0 0 C 07 0 0 44 0 G 08 0 0 0 44 T 09 0 0 44 0 G 10 0 0 38 6 G 11 0 44 0 0 C 12 17 14 9 4 m 13 6 24 9 5 c 14 13 6 21 4 r 15 20 11 11 2 v 16 12 19 13 0 v 17 13 12 17 2 v 18 10 6 23 5 g 19 13 9 20 2 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ABF1:MA0570.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 10636868 RL Choi H., Hong J., Ha J., Kang J., Kim S. Y. ABFs, a family of ABA-responsive element binding factors. J. Biol. Chem. 275:1723-1730 (2000). RN [2]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC ANT/MA0571.1/JASPAR XX ID ANT:MA0571.1:JASPAR XX NA ANT XX DE ANT XX OS Arabidopsis thaliana XX BF 1275; XX P0 A C G T 01 6 4 12 12 k 02 5 7 13 9 k 03 8 0 24 2 G 04 0 32 0 2 C 05 31 0 2 1 A 06 0 34 0 0 C 07 21 0 13 0 r 08 8 6 15 5 g 09 15 1 1 17 w 10 0 3 0 31 T 11 4 25 0 5 C 12 0 34 0 0 C 13 0 33 0 1 C 14 9 11 13 1 v 15 34 0 0 0 A 16 7 1 16 10 k 17 3 1 29 1 G 18 2 10 3 19 y 19 8 6 14 6 g 20 12 10 4 8 m 21 19 4 3 8 a XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=ANT:MA0571.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 11058102 RL Nole-Wilson S., Krizek B. A. DNA binding properties of the Arabidopsis floral development protein AINTEGUMENTA. Nucleic Acids Res. 28:4076-4082 (2000). RN [2]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC At4g21330/MA0580.1/JASPAR XX ID At4g21330:MA0580.1:JASPAR XX NA At4g21330 XX DE At4g21330 XX OS Arabidopsis thaliana XX BF 9783; XX P0 A C G T 01 4 6 0 1 m 02 3 1 7 0 r 03 1 2 1 7 t 04 2 2 6 1 g 05 10 1 0 0 A 06 3 0 7 1 r 07 4 0 0 7 w 08 0 11 0 0 C 09 11 0 0 0 A 10 0 11 0 0 C 11 1 0 10 0 G 12 0 0 0 11 T 13 0 0 11 0 G 14 11 0 0 0 A XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=At4g21330:MA0580.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 22775442 RL Feng B, Lu D, Ma X, Peng Y, Sun Y, Ning G, Ma H. Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development. The Plant journal : for cell and molecular biology 72:612-24 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LEC2/MA0581.1/JASPAR XX ID LEC2:MA0581.1:JASPAR XX NA LEC2 XX DE LEC2 XX OS Arabidopsis thaliana XX BF 9908; XX P0 A C G T 01 107 86 119 175 t 02 96 163 165 63 s 03 2 475 0 10 C 04 487 0 0 0 A 05 0 0 0 487 T 06 0 0 487 0 G 07 0 487 0 0 C 08 301 30 156 0 r 09 115 218 60 94 c 10 228 86 44 129 w 11 96 79 62 250 t XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LEC2:MA0581.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC SPL14/MA0586.1/JASPAR XX ID SPL14:MA0586.1:JASPAR XX NA SPL14 XX DE SPL14 XX OS Arabidopsis thaliana XX BF 3015; XX P0 A C G T 01 2 5 4 9 y 02 4 6 4 6 y 03 4 5 6 5 b 04 4 8 1 7 y 05 3 4 9 4 g 06 3 1 4 12 t 07 0 20 0 0 C 08 0 20 0 0 C 09 0 0 20 0 G 10 0 0 0 20 T 11 20 0 0 0 A 12 0 20 0 0 C 13 12 0 8 0 r 14 6 3 8 3 r 15 4 3 7 6 k 16 8 3 5 4 r 17 3 4 8 5 k 18 3 6 8 3 s 19 5 1 11 3 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=SPL14:MA0586.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 18302343 RL Liang X., Nazarenus T. J., Stone J. M. Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance.. Biochemistry 47:3645-3653 (2008). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TCP16/MA0587.1/JASPAR XX ID TCP16:MA0587.1:JASPAR XX NA TCP16 XX DE TCP16 XX OS Arabidopsis thaliana XX BF 9996; XX P0 A C G T 01 3 0 60 1 G 02 1 3 0 60 T 03 0 0 64 0 G 04 0 0 64 0 G 05 32 8 15 9 a 06 1 60 2 1 C 07 0 64 0 0 C 08 0 64 0 0 C 09 18 10 29 7 r 10 12 20 26 6 s XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TCP16:MA0587.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 22074922 RL Viola I.L, Reinheimer R, Ripoll R, Manassero N.G, Gonzalez D.H. Determinants of the DNA binding specificity of class I and class II TCP transcription factors. The Journal of biological chemistry 287:347-56 (2012). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC TGA1/MA0588.1/JASPAR XX ID TGA1:MA0588.1:JASPAR XX NA TGA1 XX DE TGA1 XX OS Arabidopsis thaliana XX BF 9921; XX P0 A C G T 01 2 5 6 10 k 02 3 8 16 2 s 03 11 9 12 0 v 04 0 0 0 36 T 05 0 0 36 0 G 06 36 0 0 0 A 07 0 33 0 3 C 08 2 0 34 0 G 09 1 3 2 20 T 10 6 5 6 5 r 11 11 0 6 7 d XX BS 54739; BS 54740; BS 54741; BS 54742; BS 54743; BS 54744; BS 54745; BS 54746; BS 54747; BS 54748; BS 54749; BS 54750; BS 54751; BS 54752; BS 54753; BS 54754; BS 54755; BS 54756; BS 54757; BS 54758; XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=TGA1:MA0588.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 1446171 RL Schindler U., Beckmann H., Cashmore A. R. TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG.. Plant Cell 4:1309-1319 (1992). RN [2]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [3]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX // AC LFY/MA0590.1/JASPAR XX ID LFY:MA0590.1:JASPAR XX NA LFY XX DE LFY XX OS Arabidopsis thaliana XX BF 9886; XX P0 A C G T 01 32 104 49 199 y 02 266 13 17 80 A 03 56 75 12 325 T 04 20 7 178 360 k 05 126 0 246 4 r 06 228 43 2 50 A 07 10 364 0 8 C 08 0 358 0 19 C 09 94 2 273 10 G 10 35 174 174 35 s 11 10 273 2 94 C 12 19 0 358 0 G 13 8 0 364 10 G 14 50 2 43 228 T 15 4 246 0 126 y 16 360 178 7 20 m 17 325 12 75 56 A 18 80 17 13 266 T 19 199 49 104 32 r XX LN https://floresta.eead.csic.es/footprintdb/index.php?motif=LFY:MA0590.1:JASPAR XX CC imported from JASPAR; SELEX XX RN [1]; RX PUBMED: 14681366 RL Sandelin A, Alkema W, Engström P, Wasserman W.W, Lenhard B. JASPAR: an open-access database for eukaryotic transcription factor binding profiles. Nucleic acids research 32:D91-4 (2004). RN [2]; RX PUBMED: 24194598 RL Mathelier A, Zhao X, Zhang A.W, Parcy F, Worsley-Hunt R, Arenillas D.J, Buchman S, Chen C.Y, Chou A, Ienasescu H, Lim J, Shyr C, Tan G, Zhou M, Lenhard B, Sandelin A, Wasserman W.W. JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. Nucleic acids research 42:D142-7 (2014). RN [3]; RX PUBMED: 21515819 RL Moyroud E, Minguet E.G, Ott F, Yant L, Posé D, Monniaux M, Blanchet S, Bastien O, Thévenon E, Weigel D, Schmid M, Parcy F. Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor. The Plant cell 23:1293-306 (2011). RN [4]; RX PUBMED: 24234003 RL Sebastian, A., Contreras-Moreira, B. footprintDB: a database of transcription factors with annotated cis elements and binding interfaces. Bioinformatics 30, 258-65 (2014). XX //