RSAT - footprint-discovery result

Analysis: Gammaproteobacteria Escherichia_coli_GCF_000005845.2_ASM584v2 taxfreq (21/03/2018 14:25)

Command: footprint-discovery -v 1 -nodie -org Escherichia_coli_GCF_000005845.2_ASM584v2 -taxon Gammaproteobacteria -genes $RSAT/public_html/tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/lexA_genes -sep_genes -lth occ 1 -lth occ_sig 0 -uth rank 50 -return occ,proba,rank -filter -bg_model taxfreq -task query_seq,filter_dyads,orthologs,ortho_seq,purge,dyads,maps,gene_index,index -o $RSAT/public_html/tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ

Query nb Query Query name Status Query promoter length Orthologs Sum ortholog sequence sizes Top dyad Max sig Nb dyads Nb matrices
1 lexA lexA OK 109 2589 373883 ctgn{10}cag|ctgn{10}cag 222.10 50 5

; Host name	sinik
; Job started	2018-03-21.142440
; Job done	2018-03-21.143159
; Seconds	25.14
;	user	25.14
;	system	0.17
;	cuser	329.59
;	csystem	56.67