Command: footprint-discovery -v 1 -nodie -org Escherichia_coli_GCF_000005845.2_ASM584v2 -taxon Gammaproteobacteria -genes $RSAT/public_html/tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/lexA_genes -sep_genes -lth occ 1 -lth occ_sig 0 -uth rank 50 -return occ,proba,rank -filter -bg_model taxfreq -task query_seq,filter_dyads,orthologs,ortho_seq,purge,dyads,maps,gene_index,index -o $RSAT/public_html/tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ
Query nb | Query | Query name | Status | Query promoter length | Orthologs | Sum ortholog sequence sizes | Top dyad | Max sig | Nb dyads | Nb matrices |
---|---|---|---|---|---|---|---|---|---|---|
1 | lexA | lexA | OK | 109 | 2589 | 373883 | ctgn{10}cag|ctgn{10}cag | 222.10 | 50 | 5 |
; Host name sinik ; Job started 2018-03-21.142440 ; Job done 2018-03-21.143159 ; Seconds 25.14 ; user 25.14 ; system 0.17 ; cuser 329.59 ; csystem 56.67