footprint-scan Gammaproteobacteria Escherichia_coli_GCF_000005845.2_ASM584v2 Matrix

Command: footprint-scan -v 0 -nodie -synthesis -sep_genes -org Escherichia_coli_GCF_000005845.2_ASM584v2 -taxon Gammaproteobacteria -m $RSAT/public_html/tmp/apache/2018/03/21/footprint-scan_Gammaproteobacteria__lexA_recA_2018-03-21.183943_2018-03-21.183943_J8t3qJ/input_matrix -matrix_format transfac -genes $RSAT/public_html/tmp/apache/2018/03/21/footprint-scan_Gammaproteobacteria__lexA_recA_2018-03-21.183943_2018-03-21.183943_J8t3qJ/lexA_recA_genes -info_lines -bginput -markov 0 -pval 1e-4 -occ_th 5 -plot_format jpg -map_format jpg -o $RSAT/public_html/tmp/apache/2018/03/21/footprint-scan_Gammaproteobacteria__lexA_recA_2018-03-21.183943_2018-03-21.183943_J8t3qJ/lexA_recA

gene #matrix score occ occ_cum inv_cum inv_cum_freq occ_prior exp_occ occ_Pval occ_Eval occ_sig weight_at_th occ_at_th exp_at_th sig_at_th OCC_Sig SigPlot FreqPlot Map name upstr_neighb_name descr
recA LexA 9.9 2 107812 274 2.535065e-03 5.522769e-06 0.60 0.000000e+00 0.000000e+00 350.00 6.0 2 10.47 350.00 [sig]

[sigplot]

[freqplot] 		[map] recA NA NA
lexA LexA 9.9 4 134724 316 2.340117e-03 5.193126e-06 0.70 0.000000e+00 0.000000e+00 350.00 5.9 4 12.98 350.00 [sig]

[sigplot]

[freqplot] 		[map] lexA NA NA

; Host name	sinik
; Job started	2018-03-21.183944
; Job done	2018-03-21.185442
; Seconds	26.63
;	user	26.63
;	system	0.28
;	cuser	801.87
;	csystem	113.54